CmUC10G183760 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC10G183760
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr10: 1297538 .. 1298958 (-)
RNA-Seq Expression	CmUC10G183760
Synteny	CmUC10G183760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTCCATTTGAGCAATTTTCCATGGCTTTGCCACCTACAGTTCTTTATAGACAGGTCGCGGCAAGCTGAGGCGGGAACACATTCCTTCAGGTTTTTTCTTCGCTTTACAATTGCATCACTCTCAGAGTTCCATCGAGAATATGGGGCTAGACAGAATGTATTGGGATGATTCCATGATTGTCAAAGCCATGGATGAAGCTATGTTGAAGTATAAGGTTTTATATCCCTCTATCTCGACCCATCTGCTAATTCTCTTTTCGAAGTATCAAAAAAGTGCTGTTTTAATTCGTCAGTCTTGGTTTGTGTTGAGTTTCTTTGAACTATTTGATTTGTGGGTTACATCTGATCAAATGTTGCCGTTTTTCAGATAATGCATGGACATGAAGTTCCCTGTGTTTCAGCTGAGGGAGGAGGAGTTTTAAATGGTTGCGGTAAGAGTGACGAGCCGAAAAGGTCCGTTGCTTTTTGGCCATAGTGTTTTTCTTGTTTTTAGGTATCATCTATTATAATTCATATCTCTGGTAGTTGAAATGCTATTGTAATTACTTAAAATTCTTAAAGTTTTTTTTGGAGTGAATTGGAACTTCTGACATCTTGGTCGAGCATATCTTATTCAGTCGAACTATATTTAGGTTGAAAAATACATAAAGTTTCGCGATCACGGTAACTGGGAATGTTCTTGTTTTTGTTTGACCCTATGAGTTGAAACGGAAGGGAAAGCTTGGATGCCTGTTGTTATGGAGTTTTTGGACAGGGTCAGTGGACCGGTCGTGTTACTTTCAAATACTCCAAGAGGCCATGAAGAATGTCTAATTACAGATGAAATACCTTGCTACTAGAGTTAAGCTGACTATTGGAAATGGGCAAGACATACACTTTTAGGAGGACACATGGTAAGGAGACGGAACTTTCTTTTCTAAGTTCCCAAGATCTACGTTGTAGCAGATATCACAAGCCTTCCTATTAGTTGTCTTTCGAAAGCTGATTCTGTCTATGCTTCCCATAAATGAAAAAGAAAAAAAGAAAAAGAAGAAGAAAAAGAAGAAGAAGAAAGCTATTCAGTCTCTTAGAATTTGATTGATTGATTGATTATTATTTTTTTAATATGAAAACTGAATGTGAATAATACGGGATAAATGGATATGGTATGAGAATGTTTCAGCTTTAGCAGCAAACCTCTCCTAAAAGACTTTTGTAAAGACTCAATCTTTGCAAGTAGGTTTGGAAGGACAAACCTAGAAAAGGTGAAAAATCTTCATTTGGGAAGTCTAGTTGGGAATCTCTTCATTGAGAGCCCCTTCTCAAATTCCTCTAGGGAAGTCTCCATCCCAGACTCACTCTTGCCTCTTTCTACAAAGGATTTTTGCAGGGATGATAATGGGGATGAATTCCCCATCCCGCCAGTTTTCTTGACACCCTGA

mRNA sequence

GGTCCATTTGAGCAATTTTCCATGGCTTTGCCACCTACAGTTCTTTATAGACAGGTCGCGGCAAGCTGAGGCGGGAACACATTCCTTCAGGTTTTTTCTTCGCTTTACAATTGCATCACTCTCAGAGTTCCATCGAGAATATGGGGCTAGACAGAATGTATTGGGATGATTCCATGATTGTCAAAGCCATGGATGAAGCTATGTTGAAGTATAAGATAATGCATGGACATGAAGTTCCCTGTGTTTCAGCTGAGGGAGGAGGAGTTTTAAATGGTTGCGGTAAGAGTGACGAGCCGAAAAGCTTTAGCAGCAAACCTCTCCTAAAAGACTTTTGTAAAGACTCAATCTTTGCAAGTAGGTTTGGAAGGACAAACCTAGAAAAGGTGAAAAATCTTCATTTGGGAAGTCTAGTTGGGAATCTCTTCATTGAGAGCCCCTTCTCAAATTCCTCTAGGGAAGTCTCCATCCCAGACTCACTCTTGCCTCTTTCTACAAAGGATTTTTGCAGGGATGATAATGGGGATGAATTCCCCATCCCGCCAGTTTTCTTGACACCCTGA

Coding sequence (CDS)

ATGGGGCTAGACAGAATGTATTGGGATGATTCCATGATTGTCAAAGCCATGGATGAAGCTATGTTGAAGTATAAGATAATGCATGGACATGAAGTTCCCTGTGTTTCAGCTGAGGGAGGAGGAGTTTTAAATGGTTGCGGTAAGAGTGACGAGCCGAAAAGCTTTAGCAGCAAACCTCTCCTAAAAGACTTTTGTAAAGACTCAATCTTTGCAAGTAGGTTTGGAAGGACAAACCTAGAAAAGGTGAAAAATCTTCATTTGGGAAGTCTAGTTGGGAATCTCTTCATTGAGAGCCCCTTCTCAAATTCCTCTAGGGAAGTCTCCATCCCAGACTCACTCTTGCCTCTTTCTACAAAGGATTTTTGCAGGGATGATAATGGGGATGAATTCCCCATCCCGCCAGTTTTCTTGACACCCTGA

Protein sequence

MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPKSFSSKPLLKDFCKDSIFASRFGRTNLEKVKNLHLGSLVGNLFIESPFSNSSREVSIPDSLLPLSTKDFCRDDNGDEFPIPPVFLTP

Homology

[Close]

BLAST of CmUC10G183760 vs. NCBI nr
Match: XP_016900686.1 (PREDICTED: uncharacterized protein LOC103490751 isoform X1 [Cucumis melo])

HSP 1 Score: 105.9 bits (263), Expect = 2.8e-19
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK 54
          MGLD+MYWD+SMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGV+N CGKSDE K
Sbjct: 1  MGLDKMYWDNSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNDCGKSDELK 53

[Close]

BLAST of CmUC10G183760 vs. NCBI nr
Match: XP_016900687.1 (PREDICTED: uncharacterized protein LOC103490751 isoform X2 [Cucumis melo])

HSP 1 Score: 105.9 bits (263), Expect = 2.8e-19
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK 54
          MGLD+MYWD+SMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGV+N CGKSDE K
Sbjct: 1  MGLDKMYWDNSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNDCGKSDELK 53

[Close]

BLAST of CmUC10G183760 vs. NCBI nr
Match: XP_008448638.1 (PREDICTED: uncharacterized protein LOC103490751 isoform X3 [Cucumis melo])

HSP 1 Score: 105.9 bits (263), Expect = 2.8e-19
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK 54
          MGLD+MYWD+SMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGV+N CGKSDE K
Sbjct: 1  MGLDKMYWDNSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNDCGKSDELK 53

[Close]

BLAST of CmUC10G183760 vs. NCBI nr
Match: XP_004150665.1 (uncharacterized protein LOC101203762 isoform X2 [Cucumis sativus] >KGN55721.1 hypothetical protein Csa_010161 [Cucumis sativus])

HSP 1 Score: 102.4 bits (254), Expect = 3.1e-18
Identity = 47/53 (88.68%), Postives = 50/53 (94.34%), Query Frame = 0


Query: 1  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK 54
          MGLD+MYWDDSMIVKAMDEAM KYKIMHGHEVP VS+EGGGV+NGCGKSDE K
Sbjct: 1  MGLDKMYWDDSMIVKAMDEAMWKYKIMHGHEVPRVSSEGGGVVNGCGKSDELK 53

[Close]

BLAST of CmUC10G183760 vs. NCBI nr
Match: XP_031739471.1 (uncharacterized protein LOC101203762 isoform X1 [Cucumis sativus])

HSP 1 Score: 102.4 bits (254), Expect = 3.1e-18
Identity = 47/53 (88.68%), Postives = 50/53 (94.34%), Query Frame = 0


Query: 1  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK 54
          MGLD+MYWDDSMIVKAMDEAM KYKIMHGHEVP VS+EGGGV+NGCGKSDE K
Sbjct: 1  MGLDKMYWDDSMIVKAMDEAMWKYKIMHGHEVPRVSSEGGGVVNGCGKSDELK 53

[Close]

BLAST of CmUC10G183760 vs. ExPASy TrEMBL
Match: A0A1S4DXH8 (uncharacterized protein LOC103490751 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490751 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.4e-19
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK 54
          MGLD+MYWD+SMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGV+N CGKSDE K
Sbjct: 1  MGLDKMYWDNSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNDCGKSDELK 53

[Close]

BLAST of CmUC10G183760 vs. ExPASy TrEMBL
Match: A0A1S4DXI5 (uncharacterized protein LOC103490751 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490751 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.4e-19
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK 54
          MGLD+MYWD+SMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGV+N CGKSDE K
Sbjct: 1  MGLDKMYWDNSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNDCGKSDELK 53

[Close]

BLAST of CmUC10G183760 vs. ExPASy TrEMBL
Match: A0A1S3BL18 (uncharacterized protein LOC103490751 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490751 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.4e-19
Identity = 48/53 (90.57%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK 54
          MGLD+MYWD+SMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGV+N CGKSDE K
Sbjct: 1  MGLDKMYWDNSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVVNDCGKSDELK 53

[Close]

BLAST of CmUC10G183760 vs. ExPASy TrEMBL
Match: A0A0A0L6D7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G008290 PE=4 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 1.5e-18
Identity = 47/53 (88.68%), Postives = 50/53 (94.34%), Query Frame = 0


Query: 1  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK 54
          MGLD+MYWDDSMIVKAMDEAM KYKIMHGHEVP VS+EGGGV+NGCGKSDE K
Sbjct: 1  MGLDKMYWDDSMIVKAMDEAMWKYKIMHGHEVPRVSSEGGGVVNGCGKSDELK 53

[Close]

BLAST of CmUC10G183760 vs. ExPASy TrEMBL
Match: A0A6J1HK48 (uncharacterized protein LOC111465241 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111465241 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 6.4e-17
Identity = 44/53 (83.02%), Postives = 48/53 (90.57%), Query Frame = 0


Query: 1  MGLDRMYWDDSMIVKAMDEAMLKYKIMHGHEVPCVSAEGGGVLNGCGKSDEPK 54
          M LDRMYWDDSMIVKAMDEAMLKYK MHG+++  VSAEGGGV NGCGKSDEP+
Sbjct: 1  MELDRMYWDDSMIVKAMDEAMLKYKTMHGYDIRRVSAEGGGVFNGCGKSDEPR 53

The following BLAST results are available for this feature:

BLAST of CmUC10G183760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900686.1	2.8e-19	90.57	PREDICTED: uncharacterized protein LOC103490751 isoform X1 [Cucumis melo]	[more]
XP_016900687.1	2.8e-19	90.57	PREDICTED: uncharacterized protein LOC103490751 isoform X2 [Cucumis melo]	[more]
XP_008448638.1	2.8e-19	90.57	PREDICTED: uncharacterized protein LOC103490751 isoform X3 [Cucumis melo]	[more]
XP_004150665.1	3.1e-18	88.68	uncharacterized protein LOC101203762 isoform X2 [Cucumis sativus] >KGN55721.1 hy...	[more]
XP_031739471.1	3.1e-18	88.68	uncharacterized protein LOC101203762 isoform X1 [Cucumis sativus]	[more]

BLAST of CmUC10G183760 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC10G183760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4DXH8	1.4e-19	90.57	uncharacterized protein LOC103490751 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4DXI5	1.4e-19	90.57	uncharacterized protein LOC103490751 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BL18	1.4e-19	90.57	uncharacterized protein LOC103490751 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0L6D7	1.5e-18	88.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G008290 PE=4 SV=1	[more]
A0A6J1HK48	6.4e-17	83.02	uncharacterized protein LOC111465241 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]

BLAST of CmUC10G183760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC10G183760.1	CmUC10G183760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus