CmUC09G177540 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTCACTACGTACCCATCTCCTCCTCCATTCGACCCACTTCACCATTTTCCCTCTTCCATTTCTCTAGAAAAGCAAAAACCATGGGGGTTTGTGCTTCATCTCAGCACTCAAATGCTAGCCTCACCAATTGGCCCTTCACTGCGAAAATTATTCATACAGATGGTAGGCTACAAGAATTGAGGCACCCAGTAAAGGCTGGCCACATTCTCAATCAAAACCCCAACTGTTTCCTCTGTAGTTCAGAATCTATGAAAATCGATTCAATCCTTCCCCAAATTTCCAGCGACAGAGAGCTCGAATTGGGGGAAATTTATTTCCTAATCCCGCTCGCGAAAGCCCATCTGCCAATCTCTCTCACGGATTTATGTGGTTTGGCCGCTAAAGCAAATGTCGCCCTCGTTAGCTCCAAGAAGGCATATCCGTCATTGAAAGCGACGCCGACCGCCGTTGGTTACCGAATCGGAACGGCAAGGACGTTGTACTCAGATTCTGGCGAAGTGGGTTTAAAGCCATTTCGAAGAAGAACCGGAGGCTGA ATGATTCACTACGTACCCATCTCCTCCTCCATTCGACCCACTTCACCATTTTCCCTCTTCCATTTCTCTAGAAAAGCAAAAACCATGGGGGTTTGTGCTTCATCTCAGCACTCAAATGCTAGCCTCACCAATTGGCCCTTCACTGCGAAAATTATTCATACAGATGGTAGGCTACAAGAATTGAGGCACCCAGTAAAGGCTGGCCACATTCTCAATCAAAACCCCAACTGTTTCCTCTGTAGTTCAGAATCTATGAAAATCGATTCAATCCTTCCCCAAATTTCCAGCGACAGAGAGCTCGAATTGGGGGAAATTTATTTCCTAATCCCGCTCGCGAAAGCCCATCTGCCAATCTCTCTCACGGATTTATGTGGTTTGGCCGCTAAAGCAAATGTCGCCCTCGTTAGCTCCAAGAAGGCATATCCGTCATTGAAAGCGACGCCGACCGCCGTTGGTTACCGAATCGGAACGGCAAGGACGTTGTACTCAGATTCTGGCGAAGTGGGTTTAAAGCCATTTCGAAGAAGAACCGGAGGCTGA ATGATTCACTACGTACCCATCTCCTCCTCCATTCGACCCACTTCACCATTTTCCCTCTTCCATTTCTCTAGAAAAGCAAAAACCATGGGGGTTTGTGCTTCATCTCAGCACTCAAATGCTAGCCTCACCAATTGGCCCTTCACTGCGAAAATTATTCATACAGATGGTAGGCTACAAGAATTGAGGCACCCAGTAAAGGCTGGCCACATTCTCAATCAAAACCCCAACTGTTTCCTCTGTAGTTCAGAATCTATGAAAATCGATTCAATCCTTCCCCAAATTTCCAGCGACAGAGAGCTCGAATTGGGGGAAATTTATTTCCTAATCCCGCTCGCGAAAGCCCATCTGCCAATCTCTCTCACGGATTTATGTGGTTTGGCCGCTAAAGCAAATGTCGCCCTCGTTAGCTCCAAGAAGGCATATCCGTCATTGAAAGCGACGCCGACCGCCGTTGGTTACCGAATCGGAACGGCAAGGACGTTGTACTCAGATTCTGGCGAAGTGGGTTTAAAGCCATTTCGAAGAAGAACCGGAGGCTGA MIHYVPISSSIRPTSPFSLFHFSRKAKTMGVCASSQHSNASLTNWPFTAKIIHTDGRLQELRHPVKAGHILNQNPNCFLCSSESMKIDSILPQISSDRELELGEIYFLIPLAKAHLPISLTDLCGLAAKANVALVSSKKAYPSLKATPTAVGYRIGTARTLYSDSGEVGLKPFRRRTGG Homology
BLAST of CmUC09G177540 vs. NCBI nr
Match: KAA0045945.1 (uncharacterized protein E6C27_scaffold243G004890 [Cucumis melo var. makuwa] >TYK13641.1 uncharacterized protein E5676_scaffold299G001510 [Cucumis melo var. makuwa]) HSP 1 Score: 250.0 bits (637), Expect = 1.6e-62 Identity = 124/134 (92.54%), Postives = 126/134 (94.03%), Query Frame = 0
BLAST of CmUC09G177540 vs. NCBI nr
Match: XP_022148561.1 (uncharacterized protein LOC111017195 [Momordica charantia]) HSP 1 Score: 237.3 bits (604), Expect = 1.0e-58 Identity = 116/134 (86.57%), Postives = 124/134 (92.54%), Query Frame = 0
BLAST of CmUC09G177540 vs. NCBI nr
Match: KGN61812.2 (hypothetical protein Csa_006308 [Cucumis sativus]) HSP 1 Score: 231.9 bits (590), Expect = 4.4e-57 Identity = 120/137 (87.59%), Postives = 124/137 (90.51%), Query Frame = 0
BLAST of CmUC09G177540 vs. NCBI nr
Match: XP_022944054.1 (uncharacterized protein LOC111448604 [Cucurbita moschata]) HSP 1 Score: 227.6 bits (579), Expect = 8.3e-56 Identity = 114/134 (85.07%), Postives = 119/134 (88.81%), Query Frame = 0
BLAST of CmUC09G177540 vs. NCBI nr
Match: XP_023512236.1 (uncharacterized protein LOC111777025 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 226.1 bits (575), Expect = 2.4e-55 Identity = 112/127 (88.19%), Postives = 118/127 (92.91%), Query Frame = 0
BLAST of CmUC09G177540 vs. ExPASy TrEMBL
Match: A0A5D3CPA0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G001510 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 7.5e-63 Identity = 124/134 (92.54%), Postives = 126/134 (94.03%), Query Frame = 0
BLAST of CmUC09G177540 vs. ExPASy TrEMBL
Match: A0A6J1D5R9 (uncharacterized protein LOC111017195 OS=Momordica charantia OX=3673 GN=LOC111017195 PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 5.1e-59 Identity = 116/134 (86.57%), Postives = 124/134 (92.54%), Query Frame = 0
BLAST of CmUC09G177540 vs. ExPASy TrEMBL
Match: A0A0A0LIX5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G239380 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 2.1e-57 Identity = 120/137 (87.59%), Postives = 124/137 (90.51%), Query Frame = 0
BLAST of CmUC09G177540 vs. ExPASy TrEMBL
Match: A0A6J1FVY0 (uncharacterized protein LOC111448604 OS=Cucurbita moschata OX=3662 GN=LOC111448604 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 4.0e-56 Identity = 114/134 (85.07%), Postives = 119/134 (88.81%), Query Frame = 0
BLAST of CmUC09G177540 vs. ExPASy TrEMBL
Match: A0A6J1JDD5 (uncharacterized protein LOC111484003 OS=Cucurbita maxima OX=3661 GN=LOC111484003 PE=4 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 4.4e-55 Identity = 113/134 (84.33%), Postives = 118/134 (88.06%), Query Frame = 0
BLAST of CmUC09G177540 vs. TAIR 10
Match: AT2G23690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G37240.1); Has 243 Blast hits to 243 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 241; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 94.7 bits (234), Expect = 7.8e-20 Identity = 43/109 (39.45%), Postives = 70/109 (64.22%), Query Frame = 0
BLAST of CmUC09G177540 vs. TAIR 10
Match: AT4G37240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G23690.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 92.0 bits (227), Expect = 5.1e-19 Identity = 44/107 (41.12%), Postives = 68/107 (63.55%), Query Frame = 0
BLAST of CmUC09G177540 vs. TAIR 10
Match: AT5G66580.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50800.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 78.2 bits (191), Expect = 7.6e-15 Identity = 40/109 (36.70%), Postives = 61/109 (55.96%), Query Frame = 0
BLAST of CmUC09G177540 vs. TAIR 10
Match: AT3G50800.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66580.1); Has 249 Blast hits to 249 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 77.0 bits (188), Expect = 1.7e-14 Identity = 41/109 (37.61%), Postives = 58/109 (53.21%), Query Frame = 0
BLAST of CmUC09G177540 vs. TAIR 10
Match: AT1G76600.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: nucleolus, nucleus; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G21010.1); Has 220 Blast hits to 220 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 220; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 68.2 bits (165), Expect = 7.8e-12 Identity = 39/116 (33.62%), Postives = 64/116 (55.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|