CmUC09G170920 (gene) Watermelon (USVL531) v1

Overview
NameCmUC09G170920
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr09: 10640734 .. 10642955 (+)
RNA-Seq ExpressionCmUC09G170920
SyntenyCmUC09G170920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGTTCGCCGCCGTCCGATTCCACTCCCACAAGGAAAACCTTCCGCCGTTTACCCACAAGCAATTCCCTTCAATTCCCAAGAAACCCATCATTCGAAGGAGGTTCTATCGGAAGCCGCTTCTCGATATAACCAATTTCTTTGAAAACTCTGTTCGATTCGGTTCGATTCAAGATGGATTCGTCGGCTCTGTTGATTCGGTTTGTTCGCCGTCGAATTCCAGGAAGAGGAAAGCTGGTGATGAAATTTGTTCTGGAACTGCCAAATCGCTCAGAATGGGTTTCAGATAACTGTGTCTTTTTCTTCCCCTCCAATTCTTTTATAGAGATTAATTTTCTTTTCATGTTAGACTATAGATTTACAGAAATTATGATCTTATTTTGCAATCTCTTTGGTTTGGGTACTTGAAACTAGAGAAATTATTGATTCATGACTTCTGGGTCATTACTAGATTAAACTTATTCGGGGAATCAACAATGGTTCTGTGGTTAAATCTCAAAACCAAAGCAGAGCTGATGTAAAACTGTGATTAGTTATAATCTTGATTTCAAGTTGGGATGCAAGGAAGGTTATTGAAATATGAAAATGAGATTGTGAGGTGTGAAAAAGAGGAAAAAGAAGATTGAGTTAAAAATGACGAGAAGAGTATGTAATAGGGATTATAAATTGACCCAAATCCTTCAATTCAAATGCGGGTTTAACCGTTATAGATTATAGAGAAATTATGATTTTAAGTTTTGGAAGGAAGAATTTGAGATGATGAATATTTTGAGTGTATCCTTGGATTTAGGTACTAGTGGATTTAAACTCATTTGATATGTGGAGAATACAAATAATATTCTATCTTAGTTAGACAAAGAGAAAATTGTGAATATATAATTAAATCACTAAGGTCTAAAGTGGAGGGTGTACAAGAAGATAGAATTAAATATTTTATGTTAGTGCTACCATGAACATAATTCACCATGGAAAAATATGGATGGTCTAATTTTTAAGGTGACATTTGGATTGTCATGTTGGAGATGCTTAAAAAAACCTATCAACAACATGATAAACTCAAATTGATTAATGTAATTTGGGTTTAGTTGACAACTAGTTTGGATTGGTTTCATAATTTAAAAGAGTAGTTTGAATTATAAAAATTTACAATTTGAACAAATAAGTTAGGTCGAAAATTAAATATCATAAAATTCAATTTAGTCTACTCAATAAATCTTCTATTGTCACATCACGACGTAAGAAACTTTAACTTTGGCTTAACTTCATTCACAACCTTGATTTGTTTACCGTTTTGATTGTGTGTAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTACTTACTCTGTGTAGAGTAGCATTTGATCTCCATTGTATGCTTGAAGTGAAATCTTGCACAACAGAATGATTTTATTTTAGGAGGAAAACACCAATTCACGTATGTATGTATATTCAATTTACACTTAGTTTTGAGGATTTTTATAATAAAAGAGATTAAATTGTTACAAAATTTTAATATTGGACTAAACTTATCATGAATTTTATGGTATATGTTTTTACTTTCACGAAAATTTTAAAGATTAATATATATTTTAACTTAATTATTTTGGTTTTTAACAAATTTGTACTTTTAATGAATATATAACTTCGTTGTTGATATGAACATGCAATTGAATCATAAAGTTTGGTTGGAATTGATATTGAAAATAACACGACATTAAGTAGCAAGTATTAAAATGATTTAGGAAAAATTACTGTTTTACTCTTCCAATTTTAAAGAATAAGTGCGTTTGGTCCCAAAGTTTTCAAAAGATATTTTTTTAGTCTTTAAGTTTTAAGAATAGATATGTTTGATCATGAAACTTCCGAAATATATTTTGTTGGTAGTCCCAAAATTTGAAGAATAAGTTTAAAAGATTAATTTATTTAAAAAATTTAATTAGAGTATTTTAATCTTTTTAAGGGTTGAATTATGGAAAGAATTTTTTAAATCTTATTTTAATAGGATTAAAATTGGAAAGTACGTGTACGCCGGTATGAAAAAGAAGAAAAAAAGATTCTTTCCTCTATTTTTCTTTTTTAATAAACATTTTCCACTTTCTTTATTTTTGACAAATTTAAAATATTAATAATAAGATGTTTGACTTCAACGCCTTCCTTTCATTCTTAGTGCTCTCTTTATTGGCCCAAAATCCTCCCTAATCCATTTCCATTTTAATTAA

mRNA sequence

ATGGAGTTCGCCGCCGTCCGATTCCACTCCCACAAGGAAAACCTTCCGCCGTTTACCCACAAGCAATTCCCTTCAATTCCCAAGAAACCCATCATTCGAAGGAGGTTCTATCGGAAGCCGCTTCTCGATATAACCAATTTCTTTGAAAACTCTGTTCGATTCGGTTCGATTCAAGATGGATTCGTCGGCTCTGTTGATTCGAATGATTTTATTTTAGGAGGAAAACACCAATTCACGATTAAAATTGGAAATGCTCTCTTTATTGGCCCAAAATCCTCCCTAATCCATTTCCATTTTAATTAA

Coding sequence (CDS)

ATGGAGTTCGCCGCCGTCCGATTCCACTCCCACAAGGAAAACCTTCCGCCGTTTACCCACAAGCAATTCCCTTCAATTCCCAAGAAACCCATCATTCGAAGGAGGTTCTATCGGAAGCCGCTTCTCGATATAACCAATTTCTTTGAAAACTCTGTTCGATTCGGTTCGATTCAAGATGGATTCGTCGGCTCTGTTGATTCGAATGATTTTATTTTAGGAGGAAAACACCAATTCACGATTAAAATTGGAAATGCTCTCTTTATTGGCCCAAAATCCTCCCTAATCCATTTCCATTTTAATTAA

Protein sequence

MEFAAVRFHSHKENLPPFTHKQFPSIPKKPIIRRRFYRKPLLDITNFFENSVRFGSIQDGFVGSVDSNDFILGGKHQFTIKIGNALFIGPKSSLIHFHFN
Homology
[Close]
BLAST of CmUC09G170920 vs. NCBI nr
Match: KGN47955.1 (hypothetical protein Csa_002785 [Cucumis sativus])

HSP 1 Score: 114.0 bits (284), Expect = 7.5e-22
Identity = 53/67 (79.10%), Postives = 59/67 (88.06%), Query Frame = 0 

Query: 1   MEFAAVRFHSHKENLPPFTHKQFPSIPKKPIIRRRFYRKPLLDITNFFENSVRFGSIQDG 60
           MEF+AVRFHS KENLPPFTHK +PSIPKKP IRRR  RKPLLDITN FEN++R GSIQDG
Sbjct: 61  MEFSAVRFHSDKENLPPFTHKLYPSIPKKPTIRRRLNRKPLLDITNSFENTIRLGSIQDG 120

Query: 61  FVGSVDS 68
           F+ SV+S
Sbjct: 121 FIASVES 127

[Close]
BLAST of CmUC09G170920 vs. NCBI nr
Match: KAG6589263.1 (hypothetical protein SDJN03_17828, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 82.4 bits (202), Expect = 2.4e-12
Identity = 45/67 (67.16%), Postives = 49/67 (73.13%), Query Frame = 0 

Query: 1  MEFAAVRFHSHKENLPPFTHKQFPSIPKKPIIRRRFYRKPLLDITNFFENSVRFGSIQDG 60
          MEFAAVRF S KENLP  + KQFP   KKPI RRR  RKPL DITN FE+SVRF  +QD 
Sbjct: 1  MEFAAVRFPSGKENLPLLSQKQFPPNQKKPITRRRLNRKPLADITNSFESSVRFSFVQD- 60

Query: 61 FVGSVDS 68
            GSV+S
Sbjct: 61 HSGSVES 66

[Close]
BLAST of CmUC09G170920 vs. ExPASy TrEMBL
Match: A0A0A0KE31 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G419520 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 3.6e-22
Identity = 53/67 (79.10%), Postives = 59/67 (88.06%), Query Frame = 0 

Query: 1   MEFAAVRFHSHKENLPPFTHKQFPSIPKKPIIRRRFYRKPLLDITNFFENSVRFGSIQDG 60
           MEF+AVRFHS KENLPPFTHK +PSIPKKP IRRR  RKPLLDITN FEN++R GSIQDG
Sbjct: 61  MEFSAVRFHSDKENLPPFTHKLYPSIPKKPTIRRRLNRKPLLDITNSFENTIRLGSIQDG 120

Query: 61  FVGSVDS 68
           F+ SV+S
Sbjct: 121 FIASVES 127

The following BLAST results are available for this feature:
BLAST of CmUC09G170920 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47955.17.5e-2279.10hypothetical protein Csa_002785 [Cucumis sativus][more]
KAG6589263.12.4e-1267.16hypothetical protein SDJN03_17828, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CmUC09G170920 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC09G170920 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KE313.6e-2279.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G419520 PE=4 SV=1[more]
BLAST of CmUC09G170920 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC09G170920.1CmUC09G170920.1mRNA