CmUC09G163860 (gene) Watermelon (USVL531) v1

Overview
NameCmUC09G163860
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr09: 3499938 .. 3500596 (+)
RNA-Seq ExpressionCmUC09G163860
SyntenyCmUC09G163860
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGAATGAGTTGTTCTTCTTGAGGAGAGAAAGCTCCACGTTTAAGGTCAGGGCGGAGATAGTTAATCCAGCGGAGGCGGCAGCTCTTGCCGCAGCGGAGGAGGCCGGCATTTCGGGCAATGTCGGTCCAGCAGCCTTGGCCATTGGAGAGCATGTATCTCATCAGCTTCTCGTCCTCCTCCGGCGACCAAAGGCCTTTCCTCAGCCGGATGTTGGCGGCGGTGGAATCAGCTGGCTTCCTCATGTATATATGGCTTATGTTATTGTTTCTATATATATATATTATTTGTTGTTGGAAGAGAGAAATAATAATAACAATAATGTTTGGATTGAGGTGGTGTGTGTTAGATAATAATGTGTGGTATATGATCTCTTAGCTTAGCTTATATATGTAAGTGTGTTTTTGTAGTTGAAGTGAAATAATATTGTTTATGAATTATAAAATATATATATATATATAAACAATGGAAGGGAAGGCTTGATGTTGTGGTAACGGTGATGATGATGGCGATGTGGTTGTGGGGTTGCTTAGAATGTGAATCTATGACTAAATGTCTATAGAAGAGAGAGAGAGATAGAGGATATTTTGTTGGTTGGTTTTTGATATAGGTAAGGGTGGGGTGGACAAAATGGATTGGAGGGGGACTTATCTATTGA

mRNA sequence

ATGGAGAATGAGTTGTTCTTCTTGAGGAGAGAAAGCTCCACGTTTAAGGTCAGGGCGGAGATAGTTAATCCAGCGGAGGCGGCAGCTCTTGCCGCAGCGGAGGAGGCCGGCATTTCGGGCAATGTCGGTCCAGCAGCCTTGGCCATTGGAGAGCATGTATCTCATCAGCTTCTCGTCCTCCTCCGGCGACCAAAGGCCTTTCCTCAGCCGGATGTTGGCGGCGGTGGAATCAGCTGGCTTCCTCATGTAAGGGTGGGGTGGACAAAATGGATTGGAGGGGGACTTATCTATTGA

Coding sequence (CDS)

ATGGAGAATGAGTTGTTCTTCTTGAGGAGAGAAAGCTCCACGTTTAAGGTCAGGGCGGAGATAGTTAATCCAGCGGAGGCGGCAGCTCTTGCCGCAGCGGAGGAGGCCGGCATTTCGGGCAATGTCGGTCCAGCAGCCTTGGCCATTGGAGAGCATGTATCTCATCAGCTTCTCGTCCTCCTCCGGCGACCAAAGGCCTTTCCTCAGCCGGATGTTGGCGGCGGTGGAATCAGCTGGCTTCCTCATGTAAGGGTGGGGTGGACAAAATGGATTGGAGGGGGACTTATCTATTGA

Protein sequence

MENELFFLRRESSTFKVRAEIVNPAEAAALAAAEEAGISGNVGPAALAIGEHVSHQLLVLLRRPKAFPQPDVGGGGISWLPHVRVGWTKWIGGGLIY
Homology
[Close]
BLAST of CmUC09G163860 vs. NCBI nr
Match: RWW07624.1 (hypothetical protein GW17_00028985 [Ensete ventricosum])

HSP 1 Score: 66.6 bits (161), Expect = 1.3e-07
Identity = 29/70 (41.43%), Postives = 51/70 (72.86%), Query Frame = 0 

Query: 1  MENELFFLRRESSTFKVRAEIVNPAEAAALAAAEEAGISGNVGPAALAIGEHVSHQLLVL 60
          ++++L FL+ E +  +  +++++P + AAL+   +A I G++ PA L++ EHV H+LL+L
Sbjct: 17 VDDKLLFLKGERAALETGSQVIDPTKTAALSTPLQARIPGDLAPATLSVSEHVVHELLIL 76

Query: 61 LRRPKAFPQP 71
          LRRP+ FPQP
Sbjct: 77 LRRPQPFPQP 86

[Close]
BLAST of CmUC09G163860 vs. ExPASy TrEMBL
Match: A0A444EBC3 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00028985 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 6.4e-08
Identity = 29/70 (41.43%), Postives = 51/70 (72.86%), Query Frame = 0 

Query: 1  MENELFFLRRESSTFKVRAEIVNPAEAAALAAAEEAGISGNVGPAALAIGEHVSHQLLVL 60
          ++++L FL+ E +  +  +++++P + AAL+   +A I G++ PA L++ EHV H+LL+L
Sbjct: 17 VDDKLLFLKGERAALETGSQVIDPTKTAALSTPLQARIPGDLAPATLSVSEHVVHELLIL 76

Query: 61 LRRPKAFPQP 71
          LRRP+ FPQP
Sbjct: 77 LRRPQPFPQP 86

The following BLAST results are available for this feature:
BLAST of CmUC09G163860 vs. NCBI nr
Match NameE-valueIdentityDescription
RWW07624.11.3e-0741.43hypothetical protein GW17_00028985 [Ensete ventricosum][more]
BLAST of CmUC09G163860 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC09G163860 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A444EBC36.4e-0841.43Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00028985 PE=4 SV=1[more]
BLAST of CmUC09G163860 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC09G163860.1CmUC09G163860.1mRNA