CmUC08G155570 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC08G155570
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Poly(A)-specific ribonuclease
Location	CmU531Chr08: 24822777 .. 24825712 (-)
RNA-Seq Expression	CmUC08G155570
Synteny	CmUC08G155570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGATTTTGCCGAAAGGTGAATCGATTAATATCCGAGAGGTGTGGGACCATAATTTGGAGGAAGAATTTGCTCTAATACGTGAAATCGTCGACAAATTTAACTACATAGCGATGGATACCGAGTTCCCTGGCGTGGTTGTTCGTCCTGTGGGTTCTTTCAAAAATATCAATGAGTATAACTACCGAACCCTCAGAGAGAATGTCGACACGTTGAAGTTGATTCAATTGGGTCTTACGTTCTCTGATGAGAATGGGAATCTCCCAACTTGTGGAACCGATAAGTTTTGCATTTGGCAGTTCAATTTCCGCGAGTTCAACATTTGCGAAGATATTTATGCAAGTGATTCCATTGAGCTTTTGCGTGAGTGTGGTATTGATTTTAAGAAGACCAATGAAGAGGGAATTGATGTCAATCGCTTCGCTGAGCTTCTCATGTCATCTGGGATTGTGTTAAACGATAATATTTACTGGGTGACGTTCCACAGCGGGTATGATTTTGGGTACTTGCTGAAATTGTTGACATGCCGAAACTTACCAGAGACCCAGGCGGAATTCTTTGATTTGATCCACATGTATTTCCCAATGGTTTATGATATCAAGCATTTGATGAGGTTTTGCAACAGTTTCCATGGTGGGTTGAACAAGCTTGCAGAGTTATTAGAAGTGGAGAGGATTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTAAGGGATACTTTTTTCAATGGTTCTACACAGAAATATGCAGGTGTTTTATACGGTCTCGGTGTTGAAACTGGTCAGACTACTAATTGAAGACACTTGCCGAGTGTTTGTAGCATTGTGAAATTTGGCTAAAGCATTGATGGGTTGTATCTGTTTTTCTTTTTCCCTTGTAAATTATGGCAGTTGGCAGTTAGTATTTCAATAAAACCTTAATGGCACTCTTTGAGTTAGTTAACTTGTTTTGTTAGATGCAATGCTATATTTTACGTGCCTTTCCATTCATTGAAACTGGTATACGTGAAAGATAGATGGATGAATACACTAGTGGTGGCAATAGATAATATATTTCCTAAGAAACTGTGTGGCTCCTTATTTGATTTCTGAAGTTAATTTTTCTTCAACTGACCTGTTGATGTGATTATTTATCCTTGTTTGCGTCAAAGCCGTTTTATCGATGCCATACACTGACGATTGTTGGTCAAGACTGATGCAATACAACTATTAGCCTTTTCTCACTTTTATTCTCAGAATCCTTGTTTAAACCTCATTATTGAGGAAAGCGTCCTTTATATTTGATTATTAAATGGTAGGCTGTCTTGTGGTAAAGAGCTTATTTTCTTTCTATAGCTGTATGTATACCAGTCTTTCAAGTTTTGTGGAGAATCAGTTCCCATGGGACATTCCCAGTCTCTGTCCACATGTGTGTTTTGGTGGCTTCCTTGTAGCTATCTCTGTGCAGCTGCTGGTATTTGATTTCAGTTTTAGATGTAACCCATTCTTTACCTGGACATATCTTACAACATCGGCTAACAATAGTTATATCATATTTTTTCTTGGCTCGTAAAGTGAGTTTCAAGATTTTTGGCTCGTAACAATAGTTAGCAATAGTTATATCATCTGTTCACAAAACTCAAGACATTCTTGGCTCGTAAAGTGAGTTTCAAGATTTTGCCTTGTTCCTTTTCTCTTCTGGTATCTCAAGTTTCAATTTTCTCTTATTTAGGTGATGTTTGATCCGTACTTATTATGAACTCGACATGGTTGGCCTAACCAAGTTATCAATTCGAACTTGCTCATCCCATCCTCTTCTTGTCCGGTGAGCACTCTCTAAATTTTATTTTCAAATTTGATGAGATTCAATACATTTGCTACAATTTTAAGGAGAATCTCTTTGTGAAGGTCGCATGTTTCAGTTGTTGAATCTCAACAATTTTATTCAACTTTCTGATTTCTAAGCTGTTGACCACCATTGTTAGATGGAAACGGGATTATGGAAGTAAAAAGTATTTCAAATAAATACTTTGCGATCTGATAGCTAAGTGGCATCTAACCGGTTTCTGTCCTGGACTGCCTTTCAGTAAACAGCCTAAGACCTAAGCAAGTTGAAGGTTGAAACTAAGAGGAGGCTTAGAATTGGGAATTTGTTGTGAAAGGGAGGAATTGTCTTAAAAAGCTCGATTGGTTATATGTTCATTGTTCTTTAGTGTAGAGAGATTGATTGTATTTTTTTTTAATTTCTTTTCAAGTGAAGTTCTTCGGGCCTACCATTCTTATGCTAGATCTGAACTTCGGACTTCCAGCATCTAGGTATCCTATATCCATTAAGGTTTCATCTCACGTTGTTCAACAAACCATACCTCATATCAAGGCATTCTATTAGAGTTCAGGACTTGGAAAAAGCAAGAAGAAAGACAGCGACTGGTTTTGTGGCCTTCATGGTACAATCGGTAAAAAAAAAAGCCAAATACTTGGCCTTTCCCTCTCACTGGCTTGAATTGAGGAAGCTTTAGATTATTCTCTTTAGATGACCTTACTCAAACAGGATCTGTTGTTTTCCATAGGTTGTACAACTTTTCTAGATTTATTGATAAGAGTTCATAAATTCTTTCCGTACCACAACTTGAGATGACAAGACTCAGGGAGGCATGTTTTCAATAGGCCTAGATTAGAACCATTCAAGGACTGGGCATGGAGCACTTAGGCTGGTGGAAGCTATTAAATGAGATGCCCTGATTGAGCTTTCCTCGCCGACGAGTCTCATTTTGGCTTCATAACATTCTGCAGGTGAAGTCATGATGGATTCTTGTTTTTACCTTCTTTTTCTTGTTGCAATAGTAGTTTTGAGCCACCCTTGTTGTGGTTTGCTGCATCATGAGCTTAGGAACTTGACTGCTGTGAGTTGCCTAATTGCTATGCTTTAA

mRNA sequence

ATGTCGATTTTGCCGAAAGGTGAATCGATTAATATCCGAGAGGTGTGGGACCATAATTTGGAGGAAGAATTTGCTCTAATACGTGAAATCGTCGACAAATTTAACTACATAGCGATGGATACCGAGTTCCCTGGCGTGGTTGTTCGTCCTGTGGGTTCTTTCAAAAATATCAATGAGTATAACTACCGAACCCTCAGAGAGAATGTCGACACGTTGAAGTTGATTCAATTGGGTCTTACGTTCTCTGATGAGAATGGGAATCTCCCAACTTGTGGAACCGATAAGTTTTGCATTTGGCAGTTCAATTTCCGCGAGTTCAACATTTGCGAAGATATTTATGCAAGTGATTCCATTGAGCTTTTGCGTGAGTGTGGTATTGATTTTAAGAAGACCAATGAAGAGGGAATTGATGTCAATCGCTTCGCTGAGCTTCTCATGTCATCTGGGATTGTGTTAAACGATAATATTTACTGGGTGACGTTCCACAGCGGGTATGATTTTGGGTACTTGCTGAAATTGTTGACATGCCGAAACTTACCAGAGACCCAGGCGGAATTCTTTGATTTGATCCACATGTATTTCCCAATGGTTTATGATATCAAGCATTTGATGAGGTTTTGCAACAGTTTCCATGGTGGGTTGAACAAGCTTGCAGAGTTATTAGAAGTGGAGAGGATTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTAAGGGATACTTTTTTCAATGGTTCTACACAGAAATATGCAGGTGTTTTATACGGTCTCGGTGTTGAAACTGGTGAAGTCATGATGGATTCTTGTTTTTACCTTCTTTTTCTTGTTGCAATAGTAGTTTTGAGCCACCCTTGTTGTGGTTTGCTGCATCATGAGCTTAGGAACTTGACTGCTGTGAGTTGCCTAATTGCTATGCTTTAA

Coding sequence (CDS)

ATGTCGATTTTGCCGAAAGGTGAATCGATTAATATCCGAGAGGTGTGGGACCATAATTTGGAGGAAGAATTTGCTCTAATACGTGAAATCGTCGACAAATTTAACTACATAGCGATGGATACCGAGTTCCCTGGCGTGGTTGTTCGTCCTGTGGGTTCTTTCAAAAATATCAATGAGTATAACTACCGAACCCTCAGAGAGAATGTCGACACGTTGAAGTTGATTCAATTGGGTCTTACGTTCTCTGATGAGAATGGGAATCTCCCAACTTGTGGAACCGATAAGTTTTGCATTTGGCAGTTCAATTTCCGCGAGTTCAACATTTGCGAAGATATTTATGCAAGTGATTCCATTGAGCTTTTGCGTGAGTGTGGTATTGATTTTAAGAAGACCAATGAAGAGGGAATTGATGTCAATCGCTTCGCTGAGCTTCTCATGTCATCTGGGATTGTGTTAAACGATAATATTTACTGGGTGACGTTCCACAGCGGGTATGATTTTGGGTACTTGCTGAAATTGTTGACATGCCGAAACTTACCAGAGACCCAGGCGGAATTCTTTGATTTGATCCACATGTATTTCCCAATGGTTTATGATATCAAGCATTTGATGAGGTTTTGCAACAGTTTCCATGGTGGGTTGAACAAGCTTGCAGAGTTATTAGAAGTGGAGAGGATTGGAGTTTGCCATCAAGCAGGATCAGATAGCCTCCTTACTGCCTGTACTTTCAGGAAGTTAAGGGATACTTTTTTCAATGGTTCTACACAGAAATATGCAGGTGTTTTATACGGTCTCGGTGTTGAAACTGGTGAAGTCATGATGGATTCTTGTTTTTACCTTCTTTTTCTTGTTGCAATAGTAGTTTTGAGCCACCCTTGTTGTGGTTTGCTGCATCATGAGCTTAGGAACTTGACTGCTGTGAGTTGCCTAATTGCTATGCTTTAA

Protein sequence

MSILPKGESINIREVWDHNLEEEFALIREIVDKFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICEDIYASDSIELLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRDTFFNGSTQKYAGVLYGLGVETGEVMMDSCFYLLFLVAIVVLSHPCCGLLHHELRNLTAVSCLIAML

Homology

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BLAST of CmUC08G155570 vs. NCBI nr
Match: XP_038886120.1 (probable CCR4-associated factor 1 homolog 7 [Benincasa hispida])

HSP 1 Score: 560.5 bits (1443), Expect = 9.5e-156
Identity = 265/271 (97.79%), Postives = 270/271 (99.63%), Query Frame = 0


Query: 1   MSILPKGESINIREVWDHNLEEEFALIREIVDKFNYIAMDTEFPGVVVRPVGSFKNINEY 60
           MSILPKGESINIREVW+HNLEEEFALIREIVD+FNYIAMDTEFPGVVVRPVGSFKNINEY
Sbjct: 1   MSILPKGESINIREVWNHNLEEEFALIREIVDQFNYIAMDTEFPGVVVRPVGSFKNINEY 60

Query: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICEDIYASDSIEL 120
           NYRTL+ENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICEDIYASDSIEL
Sbjct: 61  NYRTLKENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICEDIYASDSIEL 120

Query: 121 LRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLP 180
           LRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLP
Sbjct: 121 LRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLP 180

Query: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           +TQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 QTQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGE 272
           CTFRKLRDTFFNGSTQKYAGVLYGLGVE G+
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVEPGQ 271

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BLAST of CmUC08G155570 vs. NCBI nr
Match: XP_004138706.1 (probable CCR4-associated factor 1 homolog 7 [Cucumis sativus] >KGN62986.1 hypothetical protein Csa_021871 [Cucumis sativus])

HSP 1 Score: 552.7 bits (1423), Expect = 2.0e-153
Identity = 261/271 (96.31%), Postives = 269/271 (99.26%), Query Frame = 0


Query: 1   MSILPKGESINIREVWDHNLEEEFALIREIVDKFNYIAMDTEFPGVVVRPVGSFKNINEY 60
           MSILPKGESINIREVW+ NLEEEFALIR+IVD+FNYIAMDTEFPGVVVRPVGSFKNINEY
Sbjct: 1   MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEY 60

Query: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICEDIYASDSIEL 120
           NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIC+DIYASDSIEL
Sbjct: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICDDIYASDSIEL 120

Query: 121 LRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLP 180
           LRECGIDF+KT+EEGIDVNRF ELLMSSGIVLNDNI+WVTFHSGYDFGYLLKLLTCRNLP
Sbjct: 121 LRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLP 180

Query: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGE 272
           CTFRKLRDTFFNGSTQKYAGVLYGLGVETG+
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ 271

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BLAST of CmUC08G155570 vs. NCBI nr
Match: KAA0064894.1 (putative CCR4-associated factor 1-like protein 7 [Cucumis melo var. makuwa])

HSP 1 Score: 550.4 bits (1417), Expect = 9.8e-153
Identity = 260/271 (95.94%), Postives = 268/271 (98.89%), Query Frame = 0


Query: 1   MSILPKGESINIREVWDHNLEEEFALIREIVDKFNYIAMDTEFPGVVVRPVGSFKNINEY 60
           MSILPKGESINIREVW+ NLEEEFALIR+IVD+FNYIAMDTEFPGVVVRPVGSFKNINEY
Sbjct: 1   MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEY 60

Query: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICEDIYASDSIEL 120
           NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIC+DIYASDSIEL
Sbjct: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICDDIYASDSIEL 120

Query: 121 LRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLP 180
           LRECGIDF+KT+EEGIDVNRF ELLMSSGIVLNDNI+WVTFHSGYDFGYLLKLLTCRNLP
Sbjct: 121 LRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLP 180

Query: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGE 272
           CTFRKLRDTFFNGS QKYAGVLYGLGVETG+
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVETGQ 271

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BLAST of CmUC08G155570 vs. NCBI nr
Match: XP_008445257.1 (PREDICTED: LOW QUALITY PROTEIN: probable CCR4-associated factor 1 homolog 7 [Cucumis melo])

HSP 1 Score: 548.9 bits (1413), Expect = 2.8e-152
Identity = 260/271 (95.94%), Postives = 267/271 (98.52%), Query Frame = 0


Query: 1   MSILPKGESINIREVWDHNLEEEFALIREIVDKFNYIAMDTEFPGVVVRPVGSFKNINEY 60
           MSILPKGESINIREVW+ NLEEEFALIR+IVD+FNYIAMDTEFPGVVVRPVGSFKNINEY
Sbjct: 1   MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEY 60

Query: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICEDIYASDSIEL 120
           NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIC+DIYASDSIEL
Sbjct: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICDDIYASDSIEL 120

Query: 121 LRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLP 180
           LRECGIDF+KT+EEGIDVNRF ELLMSSGIVLNDNI WVTFHSGYDFGYLLKLLTCRNLP
Sbjct: 121 LRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIXWVTFHSGYDFGYLLKLLTCRNLP 180

Query: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGE 272
           CTFRKLRDTFFNGS QKYAGVLYGLGVETG+
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVETGQ 271

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BLAST of CmUC08G155570 vs. NCBI nr
Match: XP_022132176.1 (probable CCR4-associated factor 1 homolog 7 [Momordica charantia])

HSP 1 Score: 529.6 bits (1363), Expect = 1.8e-146
Identity = 248/271 (91.51%), Postives = 264/271 (97.42%), Query Frame = 0


Query: 1   MSILPKGESINIREVWDHNLEEEFALIREIVDKFNYIAMDTEFPGVVVRPVGSFKNINEY 60
           MSILPKGESI+IREVWDHNLEEEFAL+REIVD+FNYIAMDTEFPGVV+RPVG+FKNINEY
Sbjct: 1   MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEY 60

Query: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICEDIYASDSIEL 120
           NY+TL++NVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNI EDI+ASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIEL 120

Query: 121 LRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLP 180
           LR+CGIDFKK NEEGIDVNRFAELLMSSGIVLND + WVTFHSGYDFGYLLKLLTCR+LP
Sbjct: 121 LRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           +TQA FFDLI+MYFPMVYDIKHLM+FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 DTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGE 272
           CTFRKLRDTFFNGSTQKYAGVLYGLGVE G+
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ 271

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BLAST of CmUC08G155570 vs. ExPASy Swiss-Prot
Match: Q9SKZ2 (Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=CAF1-7 PE=2 SV=2)

HSP 1 Score: 440.3 bits (1131), Expect = 1.9e-122
Identity = 203/274 (74.09%), Postives = 239/274 (87.23%), Query Frame = 0


Query: 1   MSILPKGESINIREVWDHNLEEEFALIREIVDKFNYIAMDTEFPGVVVRPVGSFKNINEY 60
           MS+  K +SI IREVW+ NLE E ALIRE+VD F ++AMDTEFPG+V RPVG+FK   EY
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIWQFNFREFNICEDIYASDSIE 120
           +Y TL+ NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFREF++  DIYA+DSIE
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNL 180
           LLR+ GIDF K NE GID  RFAELLMSSGIVLN+N++WVTFHSGYDFGYLLKLLTC+NL
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           PETQ  FF++I +YFP VYDIKHLM+FCNS HGGLNKLAELL+VER+G+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSTQKYAGVLYGLGVETGEVM 274
           +CTFRKL++ FF GS +KY+GVLYGLGVE G+++
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVENGQIV 274

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BLAST of CmUC08G155570 vs. ExPASy Swiss-Prot
Match: Q9LEU4 (Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=CAF1-10 PE=2 SV=1)

HSP 1 Score: 436.8 bits (1122), Expect = 2.1e-121
Identity = 205/265 (77.36%), Postives = 233/265 (87.92%), Query Frame = 0


Query: 6   KGESINIREVWDHNLEEEFALIREIVDKFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTL 65
           K +SI IREVWD+NL EEFALIREIVDKF+YIAMDTEFPGVV++PV +FK  N+ NYRTL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  RENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICEDIYASDSIELLRECG 125
           +ENVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFREFNI EDIYAS+SIELLR+CG
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPETQAE 185
           IDFKK  E+GIDV RF EL+MSSGIVLND I WVTFH GYDFGYL+KLLTC+ LP  QA+
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRK 245
           FF L+++YFP VYDIKHLM FCN   GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRDTFFNGSTQKYAGVLYGLGVETG 271
           L++ +F GST+KY GVLYGLGVE G
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVEDG 270

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BLAST of CmUC08G155570 vs. ExPASy Swiss-Prot
Match: Q9SAI2 (Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=CAF1-6 PE=1 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 8.7e-120
Identity = 196/272 (72.06%), Postives = 236/272 (86.76%), Query Frame = 0


Query: 1   MSILPKGESINIREVWDHNLEEEFALIREIVDKFNYIAMDTEFPGVVVRPVGSFKNINEY 60
           MS+  K +SI IREVW+ NL+EE  LIR++VD F Y+AMDTEFPG+VVRPVG+FK+  +Y
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICEDIYASDSIEL 120
           +Y TL+ NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++  DI+A DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLP 180
           L++ GID  K   +GID  RFAELLMSSGIVLN+N++WVTFHSGYDFGYLLKLLTC+NLP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           ++Q +FF LI++YFP VYDIKHLM+FCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGEV 273
           CTFRKL++ FF G   KY+GVLYGLGVE G+V
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENGQV 272

[Close]

BLAST of CmUC08G155570 vs. ExPASy Swiss-Prot
Match: Q9S9P2 (Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=CAF1-2 PE=1 SV=1)

HSP 1 Score: 352.4 bits (903), Expect = 5.1e-96
Identity = 166/264 (62.88%), Postives = 206/264 (78.03%), Query Frame = 0


Query: 8   ESINIREVWDHNLEEEFALIREIVDKFNYIAMDTEFPGVVVRPVGSFKNIN------EYN 67
           ++I IREVW+HNLE+E ALI + +D F Y+AMDTEFPG+V + V +  N N      EYN
Sbjct: 12  DTIEIREVWNHNLEQEMALIEQSIDDFPYVAMDTEFPGIVCKTVTANPNPNPYSIHYEYN 71

Query: 68  YRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICEDIYASDSIELL 127
           Y TL+ NV+ LKLIQLGLT SDE GNLPTCGT+K CIWQFNFREFN+  D++A DSIELL
Sbjct: 72  YDTLKANVNMLKLIQLGLTLSDEKGNLPTCGTNKQCIWQFNFREFNVISDMFALDSIELL 131

Query: 128 RECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPE 187
           R+  ID +K NE G+D  RFAELLM SG+VLND I+WVTFH GYDFGYLLKLL+ + LPE
Sbjct: 132 RKSAIDLEKNNECGVDAKRFAELLMGSGVVLNDKIHWVTFHCGYDFGYLLKLLSGKELPE 191

Query: 188 TQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTAC 247
             ++FFD +  +FP+VYDIK+LM FC + +GGL K+AELL V+R+G+ HQAGSDSLLT  
Sbjct: 192 EISDFFDQMEKFFPVVYDIKYLMGFCTNLYGGLEKIAELLGVKRVGISHQAGSDSLLTLR 251

Query: 248 TFRKLRDTFFNGSTQKYAGVLYGL 266
           TF K+++ FF GS  KY+G L+GL
Sbjct: 252 TFIKMKEFFFTGSLLKYSGFLFGL 275

[Close]

BLAST of CmUC08G155570 vs. ExPASy Swiss-Prot
Match: Q3ZC01 (CCR4-NOT transcription complex subunit 7 OS=Bos taurus OX=9913 GN=CNOT7 PE=2 SV=1)

HSP 1 Score: 302.0 bits (772), Expect = 8.0e-81
Identity = 147/260 (56.54%), Postives = 190/260 (73.08%), Query Frame = 0


Query: 9   SINIREVWDHNLEEEFALIREIVDKFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTLREN 68
           S  I EVW  NL+EE   IR+++ K+NY+AMDTEFPGVV RP+G F++  +Y Y+ LR N
Sbjct: 9   SQRICEVWACNLDEEMKKIRQVIRKYNYVAMDTEFPGVVARPIGEFRSNADYQYQLLRCN 68

Query: 69  VDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICEDIYASDSIELLRECGIDF 128
           VD LK+IQLGLTF +E G  P  GT     WQFNF+ FN+ ED+YA DSIELL   GI F
Sbjct: 69  VDLLKIIQLGLTFMNEQGEYPP-GTS---TWQFNFK-FNLTEDMYAQDSIELLTTSGIQF 128

Query: 129 KKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPETQAEFFD 188
           KK  EEGI+   FAELLM+SG+VL + + W++FHSGYDFGYL+K+LT  NLPE + +FF+
Sbjct: 129 KKHEEEGIETQYFAELLMTSGVVLCEGVKWLSFHSGYDFGYLIKILTNSNLPEEELDFFE 188

Query: 189 LIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRD 248
           ++ ++FP++YD+K+LM+ C +  GGL ++AE LE+ERIG  HQAGSDSLLT   F K+R+
Sbjct: 189 ILRLFFPVIYDVKYLMKSCKNLKGGLQEVAEQLELERIGPQHQAGSDSLLTGMAFFKMRE 248

Query: 249 TFFNG--STQKYAGVLYGLG 267
            FF       KY G LYGLG
Sbjct: 249 MFFEDHIDDAKYCGHLYGLG 263

[Close]

BLAST of CmUC08G155570 vs. ExPASy TrEMBL
Match: A0A0A0LSM4 (Poly(A)-specific ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_2G382590 PE=3 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 9.6e-154
Identity = 261/271 (96.31%), Postives = 269/271 (99.26%), Query Frame = 0


Query: 1   MSILPKGESINIREVWDHNLEEEFALIREIVDKFNYIAMDTEFPGVVVRPVGSFKNINEY 60
           MSILPKGESINIREVW+ NLEEEFALIR+IVD+FNYIAMDTEFPGVVVRPVGSFKNINEY
Sbjct: 1   MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEY 60

Query: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICEDIYASDSIEL 120
           NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIC+DIYASDSIEL
Sbjct: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICDDIYASDSIEL 120

Query: 121 LRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLP 180
           LRECGIDF+KT+EEGIDVNRF ELLMSSGIVLNDNI+WVTFHSGYDFGYLLKLLTCRNLP
Sbjct: 121 LRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLP 180

Query: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGE 272
           CTFRKLRDTFFNGSTQKYAGVLYGLGVETG+
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ 271

[Close]

BLAST of CmUC08G155570 vs. ExPASy TrEMBL
Match: A0A5A7VC99 (Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002090 PE=3 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 4.7e-153
Identity = 260/271 (95.94%), Postives = 268/271 (98.89%), Query Frame = 0


Query: 1   MSILPKGESINIREVWDHNLEEEFALIREIVDKFNYIAMDTEFPGVVVRPVGSFKNINEY 60
           MSILPKGESINIREVW+ NLEEEFALIR+IVD+FNYIAMDTEFPGVVVRPVGSFKNINEY
Sbjct: 1   MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEY 60

Query: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICEDIYASDSIEL 120
           NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIC+DIYASDSIEL
Sbjct: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICDDIYASDSIEL 120

Query: 121 LRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLP 180
           LRECGIDF+KT+EEGIDVNRF ELLMSSGIVLNDNI+WVTFHSGYDFGYLLKLLTCRNLP
Sbjct: 121 LRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIFWVTFHSGYDFGYLLKLLTCRNLP 180

Query: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGE 272
           CTFRKLRDTFFNGS QKYAGVLYGLGVETG+
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVETGQ 271

[Close]

BLAST of CmUC08G155570 vs. ExPASy TrEMBL
Match: A0A1S3BD02 (Poly(A)-specific ribonuclease OS=Cucumis melo OX=3656 GN=LOC103488343 PE=3 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 1.4e-152
Identity = 260/271 (95.94%), Postives = 267/271 (98.52%), Query Frame = 0


Query: 1   MSILPKGESINIREVWDHNLEEEFALIREIVDKFNYIAMDTEFPGVVVRPVGSFKNINEY 60
           MSILPKGESINIREVW+ NLEEEFALIR+IVD+FNYIAMDTEFPGVVVRPVGSFKNINEY
Sbjct: 1   MSILPKGESINIREVWNDNLEEEFALIRDIVDQFNYIAMDTEFPGVVVRPVGSFKNINEY 60

Query: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICEDIYASDSIEL 120
           NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNIC+DIYASDSIEL
Sbjct: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICDDIYASDSIEL 120

Query: 121 LRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLP 180
           LRECGIDF+KT+EEGIDVNRF ELLMSSGIVLNDNI WVTFHSGYDFGYLLKLLTCRNLP
Sbjct: 121 LRECGIDFQKTHEEGIDVNRFGELLMSSGIVLNDNIXWVTFHSGYDFGYLLKLLTCRNLP 180

Query: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGE 272
           CTFRKLRDTFFNGS QKYAGVLYGLGVETG+
Sbjct: 241 CTFRKLRDTFFNGSIQKYAGVLYGLGVETGQ 271

[Close]

BLAST of CmUC08G155570 vs. ExPASy TrEMBL
Match: A0A6J1BRI8 (Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111005098 PE=3 SV=1)

HSP 1 Score: 529.6 bits (1363), Expect = 8.7e-147
Identity = 248/271 (91.51%), Postives = 264/271 (97.42%), Query Frame = 0


Query: 1   MSILPKGESINIREVWDHNLEEEFALIREIVDKFNYIAMDTEFPGVVVRPVGSFKNINEY 60
           MSILPKGESI+IREVWDHNLEEEFAL+REIVD+FNYIAMDTEFPGVV+RPVG+FKNINEY
Sbjct: 1   MSILPKGESIHIREVWDHNLEEEFALLREIVDQFNYIAMDTEFPGVVLRPVGAFKNINEY 60

Query: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICEDIYASDSIEL 120
           NY+TL++NVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNI EDI+ASDSIEL
Sbjct: 61  NYQTLKDNVDMLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISEDIFASDSIEL 120

Query: 121 LRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLP 180
           LR+CGIDFKK NEEGIDVNRFAELLMSSGIVLND + WVTFHSGYDFGYLLKLLTCR+LP
Sbjct: 121 LRQCGIDFKKNNEEGIDVNRFAELLMSSGIVLNDTVNWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           +TQA FFDLI+MYFPMVYDIKHLM+FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 DTQAGFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGE 272
           CTFRKLRDTFFNGSTQKYAGVLYGLGVE G+
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVENGQ 271

[Close]

BLAST of CmUC08G155570 vs. ExPASy TrEMBL
Match: A0A6J1KLE0 (Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111496296 PE=3 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 2.5e-146
Identity = 246/271 (90.77%), Postives = 264/271 (97.42%), Query Frame = 0


Query: 1   MSILPKGESINIREVWDHNLEEEFALIREIVDKFNYIAMDTEFPGVVVRPVGSFKNINEY 60
           MSILPKGESI+IREVW+HN+EEEFAL+REIVD+FNYIAMDTEFPGVVVRPVG+FKNIN+Y
Sbjct: 1   MSILPKGESIHIREVWNHNVEEEFALMREIVDQFNYIAMDTEFPGVVVRPVGAFKNINDY 60

Query: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICEDIYASDSIEL 120
           NY+TL++NVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNI  DI+ASDSIEL
Sbjct: 61  NYQTLKDNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNISNDIFASDSIEL 120

Query: 121 LRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLP 180
           LR+CGIDF+K NEEGIDVN F ELLMSSGIVLNDN+YWVTFHSGYDFGYLLKLLTCR+LP
Sbjct: 121 LRQCGIDFQKNNEEGIDVNHFGELLMSSGIVLNDNVYWVTFHSGYDFGYLLKLLTCRSLP 180

Query: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
            TQA FFDLI+MYFPMVYDIKHLM+FCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA
Sbjct: 181 GTQAAFFDLINMYFPMVYDIKHLMKFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGE 272
           CTFRKLRDTFFNGSTQKYAGVLYGLGVETG+
Sbjct: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGQ 271

[Close]

BLAST of CmUC08G155570 vs. TAIR 10
Match: AT2G32070.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 440.3 bits (1131), Expect = 1.3e-123
Identity = 203/274 (74.09%), Postives = 239/274 (87.23%), Query Frame = 0


Query: 1   MSILPKGESINIREVWDHNLEEEFALIREIVDKFNYIAMDTEFPGVVVRPVGSFKNINEY 60
           MS+  K +SI IREVW+ NLE E ALIRE+VD F ++AMDTEFPG+V RPVG+FK   EY
Sbjct: 1   MSLFLKDDSIQIREVWNDNLESEMALIREVVDDFPFVAMDTEFPGIVCRPVGTFKTNTEY 60

Query: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIWQFNFREFNICEDIYASDSIE 120
           +Y TL+ NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIWQFNFREF++  DIYA+DSIE
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSDEKGNLPTCGTDNKYCIWQFNFREFDLESDIYATDSIE 120

Query: 121 LLRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNL 180
           LLR+ GIDF K NE GID  RFAELLMSSGIVLN+N++WVTFHSGYDFGYLLKLLTC+NL
Sbjct: 121 LLRQSGIDFVKNNEFGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNL 180

Query: 181 PETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLT 240
           PETQ  FF++I +YFP VYDIKHLM+FCNS HGGLNKLAELL+VER+G+CHQAGSDSLLT
Sbjct: 181 PETQTGFFEMISVYFPRVYDIKHLMKFCNSLHGGLNKLAELLDVERVGICHQAGSDSLLT 240

Query: 241 ACTFRKLRDTFFNGSTQKYAGVLYGLGVETGEVM 274
           +CTFRKL++ FF GS +KY+GVLYGLGVE G+++
Sbjct: 241 SCTFRKLQENFFIGSMEKYSGVLYGLGVENGQIV 274

[Close]

BLAST of CmUC08G155570 vs. TAIR 10
Match: AT5G10960.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 436.8 bits (1122), Expect = 1.5e-122
Identity = 205/265 (77.36%), Postives = 233/265 (87.92%), Query Frame = 0


Query: 6   KGESINIREVWDHNLEEEFALIREIVDKFNYIAMDTEFPGVVVRPVGSFKNINEYNYRTL 65
           K +SI IREVWD+NL EEFALIREIVDKF+YIAMDTEFPGVV++PV +FK  N+ NYRTL
Sbjct: 6   KEDSIMIREVWDYNLVEEFALIREIVDKFSYIAMDTEFPGVVLKPVATFKYNNDLNYRTL 65

Query: 66  RENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICEDIYASDSIELLRECG 125
           +ENVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFREFNI EDIYAS+SIELLR+CG
Sbjct: 66  KENVDLLKLIQVGLTFSDENGNLPTCGTDKFCIWQFNFREFNIGEDIYASESIELLRQCG 125

Query: 126 IDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLPETQAE 185
           IDFKK  E+GIDV RF EL+MSSGIVLND I WVTFH GYDFGYL+KLLTC+ LP  QA+
Sbjct: 126 IDFKKNIEKGIDVVRFGELMMSSGIVLNDAISWVTFHGGYDFGYLVKLLTCKELPLKQAD 185

Query: 186 FFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRK 245
           FF L+++YFP VYDIKHLM FCN   GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRK
Sbjct: 186 FFKLLYVYFPTVYDIKHLMTFCNGLFGGLNRLAELMGVERVGICHQAGSDSLLTLGSFRK 245

Query: 246 LRDTFFNGSTQKYAGVLYGLGVETG 271
           L++ +F GST+KY GVLYGLGVE G
Sbjct: 246 LKERYFPGSTEKYTGVLYGLGVEDG 270

[Close]

BLAST of CmUC08G155570 vs. TAIR 10
Match: AT1G80780.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 431.4 bits (1108), Expect = 6.2e-121
Identity = 196/272 (72.06%), Postives = 236/272 (86.76%), Query Frame = 0


Query: 1   MSILPKGESINIREVWDHNLEEEFALIREIVDKFNYIAMDTEFPGVVVRPVGSFKNINEY 60
           MS+  K +SI IREVW+ NL+EE  LIR++VD F Y+AMDTEFPG+VVRPVG+FK+  +Y
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICEDIYASDSIEL 120
           +Y TL+ NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++  DI+A DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLP 180
           L++ GID  K   +GID  RFAELLMSSGIVLN+N++WVTFHSGYDFGYLLKLLTC+NLP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           ++Q +FF LI++YFP VYDIKHLM+FCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGEV 273
           CTFRKL++ FF G   KY+GVLYGLGVE G+V
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENGQV 272

[Close]

BLAST of CmUC08G155570 vs. TAIR 10
Match: AT1G80780.2 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 431.4 bits (1108), Expect = 6.2e-121
Identity = 196/272 (72.06%), Postives = 236/272 (86.76%), Query Frame = 0


Query: 1   MSILPKGESINIREVWDHNLEEEFALIREIVDKFNYIAMDTEFPGVVVRPVGSFKNINEY 60
           MS+  K +SI IREVW+ NL+EE  LIR++VD F Y+AMDTEFPG+VVRPVG+FK+  +Y
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICEDIYASDSIEL 120
           +Y TL+ NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++  DI+A DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLP 180
           L++ GID  K   +GID  RFAELLMSSGIVLN+N++WVTFHSGYDFGYLLKLLTC+NLP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           ++Q +FF LI++YFP VYDIKHLM+FCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVETGEV 273
           CTFRKL++ FF G   KY+GVLYGLGVE G+V
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVENGQV 272

[Close]

BLAST of CmUC08G155570 vs. TAIR 10
Match: AT1G80780.3 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )

HSP 1 Score: 426.4 bits (1095), Expect = 2.0e-119
Identity = 194/268 (72.39%), Postives = 233/268 (86.94%), Query Frame = 0


Query: 1   MSILPKGESINIREVWDHNLEEEFALIREIVDKFNYIAMDTEFPGVVVRPVGSFKNINEY 60
           MS+  K +SI IREVW+ NL+EE  LIR++VD F Y+AMDTEFPG+VVRPVG+FK+  +Y
Sbjct: 1   MSLFLKDDSIQIREVWNDNLQEEMDLIRDVVDDFPYVAMDTEFPGIVVRPVGTFKSNADY 60

Query: 61  NYRTLRENVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNICEDIYASDSIEL 120
           +Y TL+ NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQFNFREF++  DI+A DSIEL
Sbjct: 61  HYETLKTNVNILKMIQLGLTFSNEQGNLPTCGTDKYCIWQFNFREFDLDSDIFALDSIEL 120

Query: 121 LRECGIDFKKTNEEGIDVNRFAELLMSSGIVLNDNIYWVTFHSGYDFGYLLKLLTCRNLP 180
           L++ GID  K   +GID  RFAELLMSSGIVLN+N++WVTFHSGYDFGYLLKLLTC+NLP
Sbjct: 121 LKQSGIDLAKNTLDGIDSKRFAELLMSSGIVLNENVHWVTFHSGYDFGYLLKLLTCQNLP 180

Query: 181 ETQAEFFDLIHMYFPMVYDIKHLMRFCNSFHGGLNKLAELLEVERIGVCHQAGSDSLLTA 240
           ++Q +FF LI++YFP VYDIKHLM+FCNS HGGLNKLAELLEVER+G+CHQAGSDSLLT+
Sbjct: 181 DSQTDFFKLINVYFPTVYDIKHLMKFCNSLHGGLNKLAELLEVERVGICHQAGSDSLLTS 240

Query: 241 CTFRKLRDTFFNGSTQKYAGVLYGLGVE 269
           CTFRKL++ FF G   KY+GVLYGLGVE
Sbjct: 241 CTFRKLKENFFVGPLHKYSGVLYGLGVE 268

The following BLAST results are available for this feature:

BLAST of CmUC08G155570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886120.1	9.5e-156	97.79	probable CCR4-associated factor 1 homolog 7 [Benincasa hispida]	[more]
XP_004138706.1	2.0e-153	96.31	probable CCR4-associated factor 1 homolog 7 [Cucumis sativus] >KGN62986.1 hypoth...	[more]
KAA0064894.1	9.8e-153	95.94	putative CCR4-associated factor 1-like protein 7 [Cucumis melo var. makuwa]	[more]
XP_008445257.1	2.8e-152	95.94	PREDICTED: LOW QUALITY PROTEIN: probable CCR4-associated factor 1 homolog 7 [Cuc...	[more]
XP_022132176.1	1.8e-146	91.51	probable CCR4-associated factor 1 homolog 7 [Momordica charantia]	[more]

BLAST of CmUC08G155570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKZ2	1.9e-122	74.09	Probable CCR4-associated factor 1 homolog 7 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9LEU4	2.1e-121	77.36	Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9SAI2	8.7e-120	72.06	Probable CCR4-associated factor 1 homolog 6 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q9S9P2	5.1e-96	62.88	Probable CCR4-associated factor 1 homolog 2 OS=Arabidopsis thaliana OX=3702 GN=C...	[more]
Q3ZC01	8.0e-81	56.54	CCR4-NOT transcription complex subunit 7 OS=Bos taurus OX=9913 GN=CNOT7 PE=2 SV=...	[more]

BLAST of CmUC08G155570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LSM4	9.6e-154	96.31	Poly(A)-specific ribonuclease OS=Cucumis sativus OX=3659 GN=Csa_2G382590 PE=3 SV...	[more]
A0A5A7VC99	4.7e-153	95.94	Poly(A)-specific ribonuclease OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc...	[more]
A0A1S3BD02	1.4e-152	95.94	Poly(A)-specific ribonuclease OS=Cucumis melo OX=3656 GN=LOC103488343 PE=3 SV=1	[more]
A0A6J1BRI8	8.7e-147	91.51	Poly(A)-specific ribonuclease OS=Momordica charantia OX=3673 GN=LOC111005098 PE=...	[more]
A0A6J1KLE0	2.5e-146	90.77	Poly(A)-specific ribonuclease OS=Cucurbita maxima OX=3661 GN=LOC111496296 PE=3 S...	[more]

BLAST of CmUC08G155570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G32070.1	1.3e-123	74.09	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT5G10960.1	1.5e-122	77.36	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.1	6.2e-121	72.06	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.2	6.2e-121	72.06	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]
AT1G80780.3	2.0e-119	72.39	Polynucleotidyl transferase, ribonuclease H-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 2..268 e-value: 7.4E-101 score: 338.8
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 161..243 e-value: 2.7E-6 score: 26.9
IPR006941	Ribonuclease CAF1	PFAM	PF04857	CAF1	coord: 15..136 e-value: 7.7E-12 score: 45.1
IPR039637	CCR4-NOT transcription complex subunit 7/8/Pop2	PANTHER	PTHR10797	CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT	coord: 1..271
None	No IPR available	PANTHER	PTHR10797:SF68	CCR4-ASSOCIATED FACTOR 1 HOMOLOG 10-RELATED	coord: 1..271
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 12..265

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC08G155570.1	CmUC08G155570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043928	exonucleolytic catabolism of deadenylated mRNA
biological_process	GO:0090503	RNA phosphodiester bond hydrolysis, exonucleolytic
cellular_component	GO:0030015	CCR4-NOT core complex
cellular_component	GO:0005634	nucleus
cellular_component	GO:0000932	P-body
cellular_component	GO:0030014	CCR4-NOT complex
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004535	poly(A)-specific ribonuclease activity