CmUC08G155510 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCACATGGGGGAACAGGGAGAGAATGGCCAATGAGAATAATTATAAGGCACAAGCAGTGATTCCCAAGTGGGTTATGTTTGCAGGTACAACAACATGGTGCGAGCTCTTATACATATTTATTCTTCACATGTGCCACCATATTTTTAGCCCATTCCCTAACCATATATTCTTTCTTTGCATCTTTTGTATCTTCCTTTTTTTCCTTATACTGCTTTTAGTTTACTTTTAATTATTTGGACTTCAACTGTCCTTTATCAACTACTTTCTACTTCTTTATTTTCTAGACATGTGTGGATGTATTATTATACCAAGACTCATATAGATTAGAGAATATGACATTTTTGTGACAACGATAACAGTAAATTTATTTAAAGAGTGGAAGAACGTATATGATTTCAAATGAAGACATACATACAAGTGGAAAATAATAAAGACATGAGTCAAACTATTTATAAATATAAAAAAATTTTATTATCTATCAATGATAGACCGATAAACTTCTATCGCTCAAGTGGTACAAAATGGACTAAATGGTTGTGTATTTTGGTTTATTGCATTAATTTTATTATTATTAGTAGTATTTTTGTATTCTTATTTTGTTAATTTGATTGTAAGCCCCCCTCTCTCTATATATATATTGAGCATTTAAAAAAAAAAATGGGGCAGAGATATTGTAGATCAAAAGGCCCTTTTAATTAATGAAATTGTCAATAAATTGGAGTGGGAATTCGCGAGATTGGAATAAAATTATATTGAATTACTATATTTATTTTGAATTTTTGAAAGAGAAAAAAAAAAGACACATCATGAATATGTTGATTTTGTTTATGATAACCTTAGAAATGTGCGATTTAAAAGATATATTAAAAAAAAGTGAGAACCTATATTAAAAGAGTTAATAAAAAGTAGATTTCTTACTTTTGTGTAAAATATCGTGGTTCGAAAATCATCAATTCAATTCTTAATTTAGTATGGATGATCTACGAGTCAAAAGATCATTTTATAAATATTAAATACTAACCAGAAAATAATGAAGAACTATTCTTTATTCCTCGTTCATCAACATATTTGAACTAATCAAACCTTATTTAATTAATCCATCATATGGTAGAGTGCTTTTTCAGTTACGTAAGATAGGTTATAAAAAAAGTAGATTTAACATCAATTTTATAGCACACACCCTAGTTAGCAAAAGCTAAAGATAGCCTTAAGAATATGATTGATTTTCTTTATGATAACCTTAAGCGATTGAGAATTAATTCTCACAAAATTTCATATATAAAAAATGATTTAAATGATATATTAAAAAAAAAAATGAGACCAGAAAAAGGAAGTAATTTCTTACTTTTGTATAGAGGCATAGAGTCACGTACTTAAAAAATCATTAATCCAATTCTTAATCTGGTATGAAATTCATATATTAAGTCAATAATCATTTCATTAATATTAACTATAAAAACAATGAAGAATAATTCTTTGTCCTCATTCATCAACCTAATTGAATCAATCCAAATTTTATTTAGTTTATCTATTAAAAAGTTGAGTACATTTAAAAAATTGAGTAAGACAGACAATCAAAATTAAAGACTAGATTTAACATTATCAATCTTACTAGCACACACCCTAGTTAGCCAACACTAAACATATCTAGATAATATAACATGATAATAGCATATATTAGACTAGGGAAAATGTAGTTCATCAATAAAGCTCAAACCAGTTACACATATACCTTGAAAATTAAGCAAATAAAAATTAAATATATATATATATAGTTTCTATTCTATTAAAAGACTGCAAAAAAAAGTGGGGGAAAAATGTGGGGCTTCCCAAATGGAAAGTAGAAAATAGATTTGAAGAGAGAGAAAGAGAGATGAATGAATTTTCTAAGTTTGGGTATTTGTTTTGTAGTGAGAGCAAAATCTAATAAAATTTGGAGATCATGTGAATAAAATTTGGTGAGTTTGAATTTAACACTTGACCTATAATATATTATTCGATATTATTCCTCACATGCATTTGCTACCAGCCAACTGCTAACTACTAGACACACACACACACACACAAATAAGAGAAGGTTATATAAGAAACCATTTCTATTCAGCCACCAGTGGGACCCCTCTTCTCTAATTACCAAAATTGCTTGACAGTTCAGTATTTGGAAAATTGCTCTCAATTTGTCACCATTTTTGTCTACAAAAACCCCCCTCTTTTCCCACTCCCACACTTCAATTTACAATCACAACACCATCAACTTCTCCTCTTCACCATGCCTAGACCACAACAGAGATTTCGTGGTGTCCGACAGCGCCATTGGGGCTCTTGGGTCTCGGAAATACGCCATCCCTTATTGTAAGTCTAGTTCTAAAAGGTTATAGGTTTGAATCTTTAATCTAACATAACACAAACAAACTGATATATGTAGTGATGTTATAAATACAGGAAAACTAGAATTTGGCTTGGTACTTTTGAGACGGCAGAAGACGCAGCACGAGCATACGATGAAGCCGCGCGCCTTATGTGTGGACCGAGAGCACGTACGAACTTCCCTTACGATGCCTCTCTCTCTCGCTCCTCGTCTTCACGCCTTCTCTCAGCTACTCTAACGGCTAAGCTCCACCGTTGCTACATGGCGTCTTTGCAGCTAACTAAGCAATCCTCCTCTGCTGCATGTCGCCCTCAAAATGACTTTTCCGTGGCATCCGGCATTGCTCCGGTCCAGCGAGTGGAAGCGGATACAACGACGGCGAAGAAAGTAAAACTGGAGAGCGTGGATTGTGGGGAGCCGTTGATGATTGAAATGTTGGACGAAGATCATATACAACAAATGATTGAGGAGCTGCTTGATTACGGTGGAATTGAGCTTCGTTCTGCTTCTGTTGTGCAGCCTCAACCCATTTGACATTGACTGTTAAGTCGTCTTCTTACTTCAACTATAAAATTTCATCTCTAATTATATGTACAAAATATCAATTAATTTACCTAATTTAATTAACCATTAAGGGAAAAAAAAAAAAAAAAAAATCCTTTTGATCGTTTGAGGTCATTATTCTCTCTTGGCCAACCCAAATTTGTTTCTCTCTAGTTTTGGCCAATTGAGTGGCGGCGCCCCCAATTTATTTCATGTACTATTTTCCAAATTTCCTCTGCGTCACATTATTATATATTAATATAAAGTCCTTATTAGTAACTTTTTTCCACAAAATTAGGTTAGAATCGCGATAATCTCATTTTACCTATTAATCATTTCTCACAGTGAAAAAACATAAAGTAGTTACATTATATTATAGCTATGATTTTTTTTCCTTTTTCCTTTTTCTTTTTTTTTTTTTTTCTCCTGCGAAATCACTTTCAATATGCAACAAAGTCAAACTCTCTGCAAATAGGTACAAAGTCTATAGACTTTTTAAACATTCATTCAAATTTTGAATAAACGTAAATTTATTACTATAGATAGATCGATTGGTA ATGGGCACATGGGGGAACAGGGAGAGAATGGCCAATGAGAATAATTATAAGGCACAAGCAGTGATTCCCAAGTGGCCACCAGTGGGACCCCTCTTCTCTAATTACCAAAATTGCTTGACAGTTCAGTATTTGGAAAATTGCTCTCAATTTGTCACCATTTTTGTCTACAAAAACCCCCCTCTTTTCCCACTCCCACACTTCAATTTACAATCACAACACCATCAACTTCTCCTCTTCACCATGCCTAGACCACAACAGAGATTTCGTGGTGTCCGACAGCGCCATTGGGGCTCTTGGGTCTCGGAAATACGCCATCCCTTATTGAAAACTAGAATTTGGCTTGGTACTTTTGAGACGGCAGAAGACGCAGCACGAGCATACGATGAAGCCGCGCGCCTTATGTGTGGACCGAGAGCACGTACGAACTTCCCTTACGATGCCTCTCTCTCTCGCTCCTCGTCTTCACGCCTTCTCTCAGCTACTCTAACGGCTAAGCTCCACCGTTGCTACATGGCGTCTTTGCAGCTAACTAAGCAATCCTCCTCTGCTGCATGTCGCCCTCAAAATGACTTTTCCGTGGCATCCGGCATTGCTCCGGTCCAGCGAGTGGAAGCGGATACAACGACGGCGAAGAAAGTAAAACTGGAGAGCGTGGATTGTGGGGAGCCGTTGATGATTGAAATGTTGGACGAAGATCATATACAACAAATGATTGAGGAGCTGCTTGATTACGGTGGAATTGAGCTTCGTTCTGCTTCTGTTGTGCAGCCTCAACCCATTTGACATTGACTGTTAAGTCGTCTTCTTACTTCAACTATAAAATTTCATCTCTAATTATATGTACAAAATATCAATTAATTTACCTAATTTAATTAACCATTAAGGGAAAAAAAAAAAAAAAAAAATCCTTTTGATCGTTTGAGGTCATTATTCTCTCTTGGCCAACCCAAATTTGTTTCTCTCTAGTTTTGGCCAATTGAGTGGCGGCGCCCCCAATTTATTTCATGTACTATTTTCCAAATTTCCTCTGCGTCACATTATTATATATTAATATAAAGTCCTTATTAGTAACTTTTTTCCACAAAATTAGGTTAGAATCGCGATAATCTCATTTTACCTATTAATCATTTCTCACAGTGAAAAAACATAAAGTAGTTACATTATATTATAGCTATGATTTTTTTTCCTTTTTCCTTTTTCTTTTTTTTTTTTTTTCTCCTGCGAAATCACTTTCAATATGCAACAAAGTCAAACTCTCTGCAAATAGGTACAAAGTCTATAGACTTTTTAAACATTCATTCAAATTTTGAATAAACGTAAATTTATTACTATAGATAGATCGATTGGTA ATGGGCACATGGGGGAACAGGGAGAGAATGGCCAATGAGAATAATTATAAGGCACAAGCAGTGATTCCCAAGTGGCCACCAGTGGGACCCCTCTTCTCTAATTACCAAAATTGCTTGACAGTTCAGTATTTGGAAAATTGCTCTCAATTTGTCACCATTTTTGTCTACAAAAACCCCCCTCTTTTCCCACTCCCACACTTCAATTTACAATCACAACACCATCAACTTCTCCTCTTCACCATGCCTAGACCACAACAGAGATTTCGTGGTGTCCGACAGCGCCATTGGGGCTCTTGGGTCTCGGAAATACGCCATCCCTTATTGAAAACTAGAATTTGGCTTGGTACTTTTGAGACGGCAGAAGACGCAGCACGAGCATACGATGAAGCCGCGCGCCTTATGTGTGGACCGAGAGCACGTACGAACTTCCCTTACGATGCCTCTCTCTCTCGCTCCTCGTCTTCACGCCTTCTCTCAGCTACTCTAACGGCTAAGCTCCACCGTTGCTACATGGCGTCTTTGCAGCTAACTAAGCAATCCTCCTCTGCTGCATGTCGCCCTCAAAATGACTTTTCCGTGGCATCCGGCATTGCTCCGGTCCAGCGAGTGGAAGCGGATACAACGACGGCGAAGAAAGTAAAACTGGAGAGCGTGGATTGTGGGGAGCCGTTGATGATTGAAATGTTGGACGAAGATCATATACAACAAATGATTGAGGAGCTGCTTGATTACGGTGGAATTGAGCTTCGTTCTGCTTCTGTTGTGCAGCCTCAACCCATTTGA MGTWGNRERMANENNYKAQAVIPKWPPVGPLFSNYQNCLTVQYLENCSQFVTIFVYKNPPLFPLPHFNLQSQHHQLLLFTMPRPQQRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYDASLSRSSSSRLLSATLTAKLHRCYMASLQLTKQSSSAACRPQNDFSVASGIAPVQRVEADTTTAKKVKLESVDCGEPLMIEMLDEDHIQQMIEELLDYGGIELRSASVVQPQPI Homology
BLAST of CmUC08G155510 vs. NCBI nr
Match: XP_038886168.1 (ethylene-responsive transcription factor ERF003-like [Benincasa hispida]) HSP 1 Score: 338.2 bits (866), Expect = 6.3e-89 Identity = 171/181 (94.48%), Postives = 178/181 (98.34%), Query Frame = 0
BLAST of CmUC08G155510 vs. NCBI nr
Match: XP_008445253.1 (PREDICTED: ethylene-responsive transcription factor ERF003-like [Cucumis melo]) HSP 1 Score: 327.4 bits (838), Expect = 1.1e-85 Identity = 173/202 (85.64%), Postives = 179/202 (88.61%), Query Frame = 0
BLAST of CmUC08G155510 vs. NCBI nr
Match: KAG7029486.1 (Ethylene-responsive transcription factor, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 321.6 bits (823), Expect = 6.1e-84 Identity = 182/239 (76.15%), Postives = 191/239 (79.92%), Query Frame = 0
BLAST of CmUC08G155510 vs. NCBI nr
Match: KAA0064899.1 (ethylene-responsive transcription factor ERF003-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 314.7 bits (805), Expect = 7.5e-82 Identity = 162/175 (92.57%), Postives = 165/175 (94.29%), Query Frame = 0
BLAST of CmUC08G155510 vs. NCBI nr
Match: XP_004138708.1 (ethylene-responsive transcription factor ERF003 [Cucumis sativus] >KGN62981.1 hypothetical protein Csa_021824 [Cucumis sativus]) HSP 1 Score: 312.4 bits (799), Expect = 3.7e-81 Identity = 160/175 (91.43%), Postives = 165/175 (94.29%), Query Frame = 0
BLAST of CmUC08G155510 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 3.4e-53 Identity = 114/182 (62.64%), Postives = 133/182 (73.08%), Query Frame = 0
BLAST of CmUC08G155510 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 7.1e-43 Identity = 100/169 (59.17%), Postives = 118/169 (69.82%), Query Frame = 0
BLAST of CmUC08G155510 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 5.1e-25 Identity = 60/101 (59.41%), Postives = 73/101 (72.28%), Query Frame = 0
BLAST of CmUC08G155510 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 5.3e-22 Identity = 78/186 (41.94%), Postives = 97/186 (52.15%), Query Frame = 0
BLAST of CmUC08G155510 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 9.0e-22 Identity = 79/182 (43.41%), Postives = 97/182 (53.30%), Query Frame = 0
BLAST of CmUC08G155510 vs. ExPASy TrEMBL
Match: A0A1S3BD40 (ethylene-responsive transcription factor ERF003-like OS=Cucumis melo OX=3656 GN=LOC103488338 PE=4 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 5.4e-86 Identity = 173/202 (85.64%), Postives = 179/202 (88.61%), Query Frame = 0
BLAST of CmUC08G155510 vs. ExPASy TrEMBL
Match: A0A5A7VHF4 (Ethylene-responsive transcription factor ERF003-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G002150 PE=4 SV=1) HSP 1 Score: 314.7 bits (805), Expect = 3.6e-82 Identity = 162/175 (92.57%), Postives = 165/175 (94.29%), Query Frame = 0
BLAST of CmUC08G155510 vs. ExPASy TrEMBL
Match: A0A0A0LSL8 (AP2/ERF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G382540 PE=4 SV=1) HSP 1 Score: 312.4 bits (799), Expect = 1.8e-81 Identity = 160/175 (91.43%), Postives = 165/175 (94.29%), Query Frame = 0
BLAST of CmUC08G155510 vs. ExPASy TrEMBL
Match: A0A6J1K9A3 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita maxima OX=3661 GN=LOC111491817 PE=4 SV=1) HSP 1 Score: 299.3 bits (765), Expect = 1.6e-77 Identity = 161/185 (87.03%), Postives = 165/185 (89.19%), Query Frame = 0
BLAST of CmUC08G155510 vs. ExPASy TrEMBL
Match: A0A6J1HED1 (ethylene-responsive transcription factor ERF003-like OS=Cucurbita moschata OX=3662 GN=LOC111462772 PE=4 SV=1) HSP 1 Score: 296.6 bits (758), Expect = 1.0e-76 Identity = 159/185 (85.95%), Postives = 164/185 (88.65%), Query Frame = 0
BLAST of CmUC08G155510 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 209.9 bits (533), Expect = 2.4e-54 Identity = 114/182 (62.64%), Postives = 133/182 (73.08%), Query Frame = 0
BLAST of CmUC08G155510 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 116.3 bits (290), Expect = 3.6e-26 Identity = 60/101 (59.41%), Postives = 73/101 (72.28%), Query Frame = 0
BLAST of CmUC08G155510 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 106.3 bits (264), Expect = 3.8e-23 Identity = 78/186 (41.94%), Postives = 97/186 (52.15%), Query Frame = 0
BLAST of CmUC08G155510 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 105.5 bits (262), Expect = 6.4e-23 Identity = 79/182 (43.41%), Postives = 97/182 (53.30%), Query Frame = 0
BLAST of CmUC08G155510 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein ) HSP 1 Score: 96.7 bits (239), Expect = 3.0e-20 Identity = 77/182 (42.31%), Postives = 95/182 (52.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|