CmUC08G148180 (gene) Watermelon (USVL531) v1

Overview
NameCmUC08G148180
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
Descriptionchaperone protein dnaJ 10
LocationCmU531Chr08: 17570704 .. 17572319 (-)
RNA-Seq ExpressionCmUC08G148180
SyntenyCmUC08G148180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTATAGGTCAGAGTCGAGCAACAACTTGACTCTTTTTGCAGCTCCCCTAAACTGGAATAGTTTATGGTATGGTCGTTATGCCTCCCTTTTTTTTACATAAAAGGAACTATTATTTTAAAATATATATATATATATATATATATATATATTTTAGTTATTTTAAACTGTAGTAAAATGAGTCAAATTATCTACAAGTATAGAAAATTTTTATCATCTGTTAACAATAAAAAAACTATAAACTTCTATCGCTTAAATGATAGATCGCGATATACTTCTATCACTCAAACAATAAAAGTCTATTGTGAGTTAAATTTTTCTATATTTATAAATAGTTTAATATTTTTTTTATTTATGATAATGTTCTTTTATTTTTTTGTCACGTGATAGTTCTTTATTGGATAACTACTTAAAAGATTACACAAAGATAGGTACAGCCCAAGCAGCACCTCAATCTTTCTAGTTTATGCTAATTAAGAAACTAGGTTTTTTTTTTCTAAATGACCACTATTTTGAATAAGTTATCGATGCATTTAGTTACTATCACAGAAACATGATCGACCTAATTTTATTGAAAGTAGAAAAAAAAAAAGTGAGGATATAAAAAACCCTACCACCACATTCAATTATATAATCATAATTTACTAACATCTTTTGCACTACTTTTTATTTTATTACTTTTTAATATAATGAGGTATACAAAAATAAGTATATCTTCAAAATCAGCTTATATATTACTCAAATCTTTGAAATTAATTTTTAAATTGAATAGCATATGCGAATGATCTTGAATCATGGTAGTCATATTTAATAGTTTCTTGAAATTCATTGTCACTAATAAATCTTATGACATTTTTATACTTGGCCTACTAGACATAAACTCACTAATTTAGGATCACATGTTATTTACCATTGTGTTTAATTTATTAATTTTTTAACTCCTCAAATACCTGATTTATTAAATTCAGAATTAAAAGCTCAAGGATTTACTATATCCTAAAATTTAGGCTATAAGACATAAAATTAAAAGTTTAACCATCTAAAATTTCAAACTTATTAACTAAGAGTCTAAGATTTACACTGGTAATTGAACTTTAAAGTTATTGGGCACAGATCCAATTATCCAGATAACCAAAAGAAACCAAAAAAAAAAAAAACAAACAAACAAAAAAAACAAAAAAAAAAAAAAAACCAGAAAACCAAAAAGAAATAAACAAAAAACAAAAAGTAACACTTGAGTCATTGAAGTATAGTTTAGATTATATTTTCAAATTTTAATTCTGAAGTTTGTATTTGACTGCATTCTTGCTGCCTCCAACACTTCTGTGACTCCTATTTTATATTTATAATATTTCTCTTCTAATTTTATAACTGTTACACTCAAAGAATATATATGTTCATATACTTCTTATTTTTCGTCTCCTCTTCCATTAAGAAGAGCCACCACCAACGACTGCAATTCTTTGATCTTTTGCACTATTTGATGGGAGTGGTGGTCACGGTTGAAATTCTATATCGTTTGTTCATGTCGTGCAGGGTATAGGTAAACTCTTCAGATGCCTCTGTAACCCAGCATTTGATGTGGACGATGATGAAATTGTGTATAAAAGCAAATGA

mRNA sequence

ATGTATAGGTCAGAGTCGAGCAACAACTTGACTCTTTTTGCAGCTCCCCTAAACTGGAATAGTTTATGTTACTATCACAGAAACATGATCGACCTAATTTTATTGAAAGTAGAAAAAAAAAAAGGTATAGGTAAACTCTTCAGATGCCTCTGTAACCCAGCATTTGATGTGGACGATGATGAAATTGTGTATAAAAGCAAATGA

Coding sequence (CDS)

ATGTATAGGTCAGAGTCGAGCAACAACTTGACTCTTTTTGCAGCTCCCCTAAACTGGAATAGTTTATGTTACTATCACAGAAACATGATCGACCTAATTTTATTGAAAGTAGAAAAAAAAAAAGGTATAGGTAAACTCTTCAGATGCCTCTGTAACCCAGCATTTGATGTGGACGATGATGAAATTGTGTATAAAAGCAAATGA

Protein sequence

MYRSESSNNLTLFAAPLNWNSLCYYHRNMIDLILLKVEKKKGIGKLFRCLCNPAFDVDDDEIVYKSK
Homology
[Close]
BLAST of CmUC08G148180 vs. NCBI nr
Match: KAG6774288.1 (hypothetical protein POTOM_021640 [Populus tomentosa])

HSP 1 Score: 61.6 bits (148), Expect = 2.9e-06
Identity = 29/46 (63.04%), Postives = 34/46 (73.91%), Query Frame = 0 

Query: 22  LCYYHRNMIDLILLKVEKKKGIGKLFRCLCNPAFDVDDDEIVYKSK 68
           L Y HR+ + + L       GIG+LFRCLCNPAFDVDD+EIVYKSK
Sbjct: 357 LLYLHRH-VTIPLRANNTSVGIGRLFRCLCNPAFDVDDEEIVYKSK 401

[Close]
BLAST of CmUC08G148180 vs. NCBI nr
Match: KAF4354944.1 (hypothetical protein F8388_003381 [Cannabis sativa])

HSP 1 Score: 60.5 bits (145), Expect = 6.6e-06
Identity = 25/27 (92.59%), Postives = 27/27 (100.00%), Query Frame = 0 

Query: 41  KGIGKLFRCLCNPAFDVDDDEIVYKSK 68
           KGIG+LFRCLCNPAFDVDD+EIVYKSK
Sbjct: 343 KGIGRLFRCLCNPAFDVDDEEIVYKSK 369

[Close]
BLAST of CmUC08G148180 vs. NCBI nr
Match: XP_011027401.1 (PREDICTED: chaperone protein dnaJ 10-like isoform X2 [Populus euphratica])

HSP 1 Score: 60.5 bits (145), Expect = 6.6e-06
Identity = 25/27 (92.59%), Postives = 27/27 (100.00%), Query Frame = 0 

Query: 41  KGIGKLFRCLCNPAFDVDDDEIVYKSK 68
           +GIG+LFRCLCNPAFDVDDDEIVYKSK
Sbjct: 357 QGIGRLFRCLCNPAFDVDDDEIVYKSK 383

[Close]
BLAST of CmUC08G148180 vs. NCBI nr
Match: XP_008441574.1 (PREDICTED: chaperone protein dnaJ 10 isoform X3 [Cucumis melo])

HSP 1 Score: 60.5 bits (145), Expect = 6.6e-06
Identity = 25/27 (92.59%), Postives = 27/27 (100.00%), Query Frame = 0 

Query: 41  KGIGKLFRCLCNPAFDVDDDEIVYKSK 68
           +GIG+LFRCLCNPAFDVDDDEIVYKSK
Sbjct: 396 QGIGRLFRCLCNPAFDVDDDEIVYKSK 422

[Close]
BLAST of CmUC08G148180 vs. NCBI nr
Match: KAF7127576.1 (hypothetical protein RHSIM_Rhsim11G0075100 [Rhododendron simsii])

HSP 1 Score: 60.5 bits (145), Expect = 6.6e-06
Identity = 25/27 (92.59%), Postives = 27/27 (100.00%), Query Frame = 0 

Query: 41  KGIGKLFRCLCNPAFDVDDDEIVYKSK 68
           +GIG+LFRCLCNPAFDVDDDEIVYKSK
Sbjct: 346 QGIGRLFRCLCNPAFDVDDDEIVYKSK 372

[Close]
BLAST of CmUC08G148180 vs. ExPASy TrEMBL
Match: R0I5V8 (J domain-containing protein OS=Capsella rubella OX=81985 GN=CARUB_v10020466mg PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.2e-06
Identity = 25/27 (92.59%), Postives = 27/27 (100.00%), Query Frame = 0 

Query: 41  KGIGKLFRCLCNPAFDVDDDEIVYKSK 68
           +GIG+LFRCLCNPAFDVDDDEIVYKSK
Sbjct: 354 QGIGRLFRCLCNPAFDVDDDEIVYKSK 380

[Close]
BLAST of CmUC08G148180 vs. ExPASy TrEMBL
Match: A0A7J7DRT4 (Chaperone protein dnaJ 10 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW04G01050 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.2e-06
Identity = 25/27 (92.59%), Postives = 27/27 (100.00%), Query Frame = 0 

Query: 41  KGIGKLFRCLCNPAFDVDDDEIVYKSK 68
           +GIG+LFRCLCNPAFDVDDDEIVYKSK
Sbjct: 359 QGIGRLFRCLCNPAFDVDDDEIVYKSK 385

[Close]
BLAST of CmUC08G148180 vs. ExPASy TrEMBL
Match: A0A0A0KDD9 (J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G344270 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.2e-06
Identity = 25/27 (92.59%), Postives = 27/27 (100.00%), Query Frame = 0 

Query: 41  KGIGKLFRCLCNPAFDVDDDEIVYKSK 68
           +GIG+LFRCLCNPAFDVDDDEIVYKSK
Sbjct: 359 QGIGRLFRCLCNPAFDVDDDEIVYKSK 385

[Close]
BLAST of CmUC08G148180 vs. ExPASy TrEMBL
Match: A0A6J1CJ96 (chaperone protein dnaJ 10 OS=Momordica charantia OX=3673 GN=LOC111011851 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.2e-06
Identity = 25/27 (92.59%), Postives = 27/27 (100.00%), Query Frame = 0 

Query: 41  KGIGKLFRCLCNPAFDVDDDEIVYKSK 68
           +GIG+LFRCLCNPAFDVDDDEIVYKSK
Sbjct: 357 QGIGRLFRCLCNPAFDVDDDEIVYKSK 383

[Close]
BLAST of CmUC08G148180 vs. ExPASy TrEMBL
Match: A0A7J6GWA9 (J domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_008847 PE=4 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.2e-06
Identity = 25/27 (92.59%), Postives = 27/27 (100.00%), Query Frame = 0 

Query: 41  KGIGKLFRCLCNPAFDVDDDEIVYKSK 68
           KGIG+LFRCLCNPAFDVDD+EIVYKSK
Sbjct: 694 KGIGRLFRCLCNPAFDVDDEEIVYKSK 720

[Close]
BLAST of CmUC08G148180 vs. TAIR 10
Match: AT1G77020.1 (DNAJ heat shock N-terminal domain-containing protein )

HSP 1 Score: 58.9 bits (141), Expect = 1.8e-09
Identity = 24/27 (88.89%), Postives = 26/27 (96.30%), Query Frame = 0 

Query: 41  KGIGKLFRCLCNPAFDVDDDEIVYKSK 68
           +GIG+LFRCLCNPAFDVDDDEIVYK K
Sbjct: 353 QGIGRLFRCLCNPAFDVDDDEIVYKGK 379

The following BLAST results are available for this feature:
BLAST of CmUC08G148180 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6774288.12.9e-0663.04hypothetical protein POTOM_021640 [Populus tomentosa][more]
KAF4354944.16.6e-0692.59hypothetical protein F8388_003381 [Cannabis sativa][more]
XP_011027401.16.6e-0692.59PREDICTED: chaperone protein dnaJ 10-like isoform X2 [Populus euphratica][more]
XP_008441574.16.6e-0692.59PREDICTED: chaperone protein dnaJ 10 isoform X3 [Cucumis melo][more]
KAF7127576.16.6e-0692.59hypothetical protein RHSIM_Rhsim11G0075100 [Rhododendron simsii][more]
BLAST of CmUC08G148180 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC08G148180 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
R0I5V83.2e-0692.59J domain-containing protein OS=Capsella rubella OX=81985 GN=CARUB_v10020466mg PE... [more]
A0A7J7DRT43.2e-0692.59Chaperone protein dnaJ 10 OS=Tripterygium wilfordii OX=458696 GN=HS088_TW04G0105... [more]
A0A0A0KDD93.2e-0692.59J domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G344270 PE=4 SV=1[more]
A0A6J1CJ963.2e-0692.59chaperone protein dnaJ 10 OS=Momordica charantia OX=3673 GN=LOC111011851 PE=4 SV... [more]
A0A7J6GWA93.2e-0692.59J domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_008847 PE=4 SV=1[more]
BLAST of CmUC08G148180 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G77020.11.8e-0988.89DNAJ heat shock N-terminal domain-containing protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC08G148180.1CmUC08G148180.1mRNA