CmUC08G146960 (gene) Watermelon (USVL531) v1

Overview
NameCmUC08G146960
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
LocationCmU531Chr08: 15160353 .. 15165960 (+)
RNA-Seq ExpressionCmUC08G146960
SyntenyCmUC08G146960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAAAACTGGTACATGGGCTTCCTCAATTTTCAGCCTCAAATGCTACATGTACTGATTGTATTAAAGGGAAACAACATAGAGACCCCTTTCCAAAGAGGAGCACTTGGAGAGCGACACAAAGGTTGGAACTTATTCATGCAGATATCTGTGACCCAATCACTTCTACTTCTAATAGCAACAAGAGGTACGTTTTGCTATTTATTGATGATTACAGCAGAAAAGCATGGGTCTATTTTTTGGTAGAGAAGTCAGAGTCTCTTAATTCTTTCAAATATTTCAAGTCTATGGTTGAAAAAGAAACTGAGTTGTCTATTAAATGTTTACGAATCGATAGAAGCGGAGAATTTAATTCAGTTGAGTTTAGTGATTTTTGCAAACAAAGTGGGATCAAAAGGCAGTTAACGACCGCTTAATACTCCACAACAAAATGGCCTAGCAGAAAGAAAAAATAGAACCATAATAAACATGGTTCATTCAATGCTATCAGAAAAGAAGATACCTAAAACCTTTTGGACGGAGGCAGTAAACTGGACTATTTATGTCTTAAATAGATGCCCAACCTTGACTGTCAAAGATATCAGAGGAAGCTTGGAGCGGAATAAATCCATTAATGGATCATTTTAGAATTTTTGCCTGCATAGCACATGCACATGTCCCAGATGCAAGAAGAACAAGCTAGACTATAAAAGCATAGGGAGGAGACAAAAGGCTATAGATTATATGATCCCATTAATAAAAAAGTTTTTGTGAGTAGAGATGTATTGTTTAAAGAAGAAAACACAATGGGAATGGGATGCAAAACAGATAGCAACAGTGTACTTAAATTTAATTGTGGAGTTAGTGCAAATGGAGAAGAAGAGATGAGTGAGAATGCAAACAAACTTGATAGTGATGGAGAGATTAGAGATGAGGGAGTTACTGAAGACCATGTTTTTAGTGAAGGGGAGCAAAGTGTTAAGGATTTGAGGCAATCTCGTGAAAGGCATCCTCCTACATGGATGGGTGATTATGTTAGTGGAGAAGGTTTATCAGAAGATGAAGCTCATATGGCACTAGATCCAATGTGTTTTGAGGAGGCTGTACAAAACGAAAATTGGAGATTGGCAATGGATAATGAAATTAAATCCATTGAGAAGAATAAAACATGGACGCTCATGTTAAAATTCTCCTCCAACGCCTTCAGCAACTAGCCTCACCCAACGCATGGCGTCGTCCTCAACGCCTCCTACTTTTGACGCATACAACTCGGTCATACACCACTATCTTCGTCGCGTCAAGACCACTCTGTCTTCGACATGGAGCGACTTCAACTCATGTCTGTCTTCAACGCATCGACTTCAGCGCATGGCTGTCCTCAACGCAGAGTGAATTCAGCACATGACTGTCCTCAACGCAGAATGGCTTTAGCGCATGGTTCAAGCACGTTTCTTTCCCCCGCCAGAATTACTTATCCTTCAACGCGGGTAGCTACCTTAGCTCACTAACCTCCGTGAATCAACCACAAACGCATGGACTTAGTCAATACTTAGCCTCAATTTTACTTTCCAAAAATTCTTACTCTCGCTCCCGGCCACTTCTTCCTTTGAAACGCATAGTCACAAACGCATGGCCGCACCCCAACGCTTGGCAACGCAAATCAGTACTTACAGCATGACAGGAAATTTAATGCAAAGGTGTCAGGTCATCATGAGTATCAACTTTTTGACGCCTATAAATAGTCCAAAGCTTCTCCAAGAAAAAGAAGGAGGAGATACCAGTTCAAGAGCCGAAAGCTCTGCACAATTTCTCCCTCACCATAACCATCCTCCATTTCGAGCTCTTCTGAGAGAAGGATTCTGAGCACCTTCAGAGTTGTCTCCCAGTGAGTGAGAATCTTCATCCTATGGAATCTATGTATCAGATTGCAACCATCTCAAGCCTCCATGAAGCAAGACGTTGCCAGTGGCGGTTTGACGCCTTTCATTTTTGTTTTATCTCCATTTCCCTCCTTCTTACTTATGTTTTGTTAATGACATTCGAGAGAATGGTTTATTTTCTTAATATGAGTTTGATTGATGCTTATCTTCCATCTATTTCCATATTAAATATCTTACACCATGTTGTTTGAATGATAAATGAGTTAGATGTAGAAGTTAGTTTTTCTCAAGCAATATTAAGCATGTTACATTTTGATTAATGCATATCTTTAGCTTGCATAACTTTGTTTGACAAACAAAAGTAGTAAGCACGACTGTCGAGCTTGAGAGAGTGGATGGTTAATCTTTAGCATTTATCAAGACTAAATGAGGTGCAGAGATGTAGTTCATCTTTTGCCAACGCAAACTTACCATGCGTCTTAGAGATAAGATTAATGTGGCATCGAAACATCGAGAGATGGATTCACAAACGCAGTTTGTAGGTATGTAATTATACTTAGAAAGTTTAAGTAACAACTAGCTCCTGCGTTAACTCTACTTTTATCACATGGTTCCATTCATTCTCAACGCATGCTATTTGATACTAAATGACATTTGACTAACCATCGCCGCGTCCACCTCATTGTTAGTTGTAGGAAATTCTATTCATTCTTTAGTATAGCTTTAGACACATACAACCAACAAATGCACATATTACATGTATAGTTCACCGCATAGTCAAACATCTAATCTCAACGCCTAGTTATTACAAATCCCTGCGTTCGACCCTGGACTCACCAGGAAACCTATAAATGCTTATACTTGGGCTTTTTATAGGAAAACTTGCTTAATCATGATCACACTTAAGAGTAATTCTCGACGCATCCTTGTACGGAAATGATAAATCTATTTTTGTGCAACAAGCTAAGAAACTCAATTTAATTCAAATAGAAATTTATACGAACACCTATCAACAAAGTATATTTTATTTAATCTAAACAAAGAGCTTTGAAGTTTGAAGATCAAGAACTATCTACTTGGAGGGTCATATAGTCTATTTCAGAACACCTGCAAAAAAGATATGCTTGCTTAAGTATAAAATAGAGAATTTTTAGAAATAAATGAGTCATACCTGAAAAAAAATATATATTTCACAAAGAAGCCTATATTTACACAAACCACCAAATTAAGATGACCCATAGGTATTTAGTTCCTAAAATTATAATAATGTAACTTTTAAGTTATAAGAAGGAGAATTATAGAAAAAACAAAAAAGGAAAAATGTTACATGATTAGTGTATTTCGGTGAAGTTAAGGTAGCGATAGACCCCAAAAAGCTGAGACTCCATTTCTTCAAGGGAATATGGTTAATCAAGGGACTATTTAAACAATCCATAGACCCCAAATGTTGAAGAAAAGTAAGGAGGGATAGGGTGCTAAGAAATTAGACTTGTAATTCAAATGTACTTATATGAATTTTTGAAGTATGCAAAAGTACTCAAAGTATTTGACAGTAAAACATAATTTGTGGAAGAAAAAGATGGTAGATCTATTTAAAACTTCATTTAAAGCACATGGGATAAGAAATTCACATTCATGAACTAAAAGGTCATTCGGGGTCAAGCTATCTGTACCTTGATTGCATCCAATATGCTGTCTTAATTTAATCAAATGGACAAATCAAATCTATATTTGTATACAAATGCAAACAATCATAAAAAGTGCTCAGTTATCCAAAGGTGCCTAAGTTTAACTTCAACTCTCAAAACAACCTAAGATATTCATAAAAAGTGTCTCACTTTGTCTCCCAACAAAAACTAAAAAACCCAACCAAAACTAAAAAACTCCAAAGTGGGACCTTAGAAGCATAAAACAAGCTAAAACAATCATAAAAGGTGGCTACTTTATGAATGAAAATTTTTTAAGCTAAAACACTTTGTCTCGCTCTCGCTCTCTCTCACTCTTGCTCTCGCCCTCGTCTCGTTTCCTTTCCTCATTCACAATCAATCTTAAGGTAAAACACTTTGTCTTGCTCACAATCACTCTTATCTAGCTTTCTCTCTCACTCTCGCTCAGAATCACTCTTATCTAGCTGTCTCTCGCTTTCGTTCTCGTTCTTGCTCTCGCTTTCGTTCTCGTTCTTGCTCTCGCTCTCTCTCTCTCGTCCCGCTCTTTTTCGCTCTCATCTCACTTCCTTTCCTCACTTATAATTCAGAACCATAACACATAAAAATTGAAACTAAGAGAATGTTAAAGAAACGATACTTGATATAATACCGTAGAATGAAGAGGAGAAAATAATATGGCGGACTGACGGACGGATGGATGAATTGACGTCAACAGACGACTGGACATGCACGGCGGACCAACTGACGCACTACTACACGAACGAACAACCACTATTGCTTGAACCGCTATTGCACGACAGACGACCGAGAGATGACACAATATTGCTGCTTCCAAATAGTAGAGAGACGACACACAACAGCAGAGAGACACCGACACGATTTGCTAAGAAAAAAGTATGCCCACGAGGCTGGAGACGCACGAAAGAGGGAGAGATTTGAGATTTTACGGCTTTTTTTTTCTTTCTTTTTTTGTTTATATAATATAATATTTTAATGATTTTTAAATTCATATTTCTTGATATTTAAAATATGTCAAATAATATGTCAATAAATAAACTTTATTCTAAATATTTGTTTTAGTGTCAAGCAAAAGTGTTATTATATTTGACACTAAAAAAATGTAGAGTACAGATTCGCGCGAAAAAATCCAAAAAATTCTGTAAAATCTCCGCTTTTTTATGCTTTTTCTTGATGTTTTTCTTTAAAAAAAAAACCTCACTACTTGACATTTTTTCATAAAAACATCAAGTAATGAAAAGTTGCATGTTTGAAGTAAGGCAATTTTTGTAGTAGTGCGAGCAAACATTATTCACCAAGAGAAGCAGGGAAGGAAAAGTTATCATTGTAAATGTATATGTTTATGATTTAATTTTTACTGATGATGATGAAGCTAAGTTGACTGAATTTAAAAAGTCCATGTTGCGAGAATTTGATATTGTTTGACTTGGGAAAAATGAGAAATTAAGTAAGGATGGAAATGGGGGTGACTGTTGATGATACACACACTACAAGCAACTAGTAGGAAGTTTAATGTATCTCACTGCCATAAACCCAACATGATGTTTGTTATTTGTTACTTGTTTTATAAGTAGGTACATGGCAACACCAACAGAAAGGGACCGTGAATTATGGAAGTCATTAGAAGAAAGGAGGAAATGGTAAATTGAAGCTGAGTGACTTTATCTACCACTGAAGCTGAGTTTGTAGCTGCTGCAGTTTGTGCTTGTCAAGCAGTTTGGGTGAAAAGAATTTTGAAGGAAATTGGTTTCTCTGATGAAGGTTTAACCATCAAGCTGTCTAAAAATTCCATTATGCATGGATGGTATAGTTGAATTGGAAGTTCTTCAAAGACTTCCAAGGTTGCTGGGAGTATGTGAAGTTTTAGATAAAAACTAATTGCTTCAAAGCATTTAAGGTTTTTTCTGGTAGTTACTTAGAATGATTCCTATTCTTTAGGGATTTTTATTTTATTTCACCTTTTGTTACCACTTAGCTGGTTTGTATCTAAAGTGGGTTTCTATTTTTGGATCATATTTCTTCTATTTCAATTTGACAAATTGATGGATAAAAGTATAGTTTAG

mRNA sequence

ATGCAAAAACTGGTACATGGGCTTCCTCAATTTTCAGCCTCAAATGCTACATTTAGTGCAAATGGAGAAGAAGAGATGAGTGAGAATGCAAACAAACTTGATAGTGATGGAGAGATTAGAGATGAGGGAGTTACTGAAGACCATGTTTTTAGTGAAGGGGAGCAAAGTGTTAAGGATTTGAGGCAATCTCGTGAAAGGCATCCTCCTACATGGATGGGTGATTATGTTAGTGGAGAAGTGACTTTATCTACCACTGAAGCTGAGTTTGTAGCTGCTGCAGTTTGTGCTTGTCAAGCAGTTTGGGTGAAAAGAATTTTGAAGGAAATTGGTTTCTCTGATGAAGGTTTAACCATCAAGCTGTCTAAAAATTCCATTATGCATGGATGCTGGTTTGTATCTAAAGTGGGTTTCTATTTTTGGATCATATTTCTTCTATTTCAATTTGACAAATTGATGGATAAAAGTATAGTTTAG

Coding sequence (CDS)

ATGCAAAAACTGGTACATGGGCTTCCTCAATTTTCAGCCTCAAATGCTACATTTAGTGCAAATGGAGAAGAAGAGATGAGTGAGAATGCAAACAAACTTGATAGTGATGGAGAGATTAGAGATGAGGGAGTTACTGAAGACCATGTTTTTAGTGAAGGGGAGCAAAGTGTTAAGGATTTGAGGCAATCTCGTGAAAGGCATCCTCCTACATGGATGGGTGATTATGTTAGTGGAGAAGTGACTTTATCTACCACTGAAGCTGAGTTTGTAGCTGCTGCAGTTTGTGCTTGTCAAGCAGTTTGGGTGAAAAGAATTTTGAAGGAAATTGGTTTCTCTGATGAAGGTTTAACCATCAAGCTGTCTAAAAATTCCATTATGCATGGATGCTGGTTTGTATCTAAAGTGGGTTTCTATTTTTGGATCATATTTCTTCTATTTCAATTTGACAAATTGATGGATAAAAGTATAGTTTAG

Protein sequence

MQKLVHGLPQFSASNATFSANGEEEMSENANKLDSDGEIRDEGVTEDHVFSEGEQSVKDLRQSRERHPPTWMGDYVSGEVTLSTTEAEFVAAAVCACQAVWVKRILKEIGFSDEGLTIKLSKNSIMHGCWFVSKVGFYFWIIFLLFQFDKLMDKSIV
Homology
[Close]
BLAST of CmUC08G146960 vs. NCBI nr
Match: KAF2301756.1 (hypothetical protein GH714_028913 [Hevea brasiliensis])

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-21
Identity = 65/109 (59.63%), Postives = 72/109 (66.06%), Query Frame = 0 

Query: 51  SEGEQSVKDLRQSRERHPPTWMGDYVSGE-----------VTLSTTEAEFVAAAVCACQA 110
           SEGE  V++L+QSRER PP WMGDYVSGE           VTLSTTEAEFVAAAVCACQ 
Sbjct: 217 SEGEDRVRELQQSRERQPPMWMGDYVSGEGLSDDEVHMPIVTLSTTEAEFVAAAVCACQG 276

Query: 111 VWVKRILKEIGFSDEGL---------TIKLSKNSIMHGCWFVSKVGFYF 140
           VW+KRILKE+G  D G          TIKLSKN +MHG      V F+F
Sbjct: 277 VWIKRILKELGQFDGGCTTVMCDNSSTIKLSKNPVMHGRSKHIDVRFHF 325

[Close]
BLAST of CmUC08G146960 vs. NCBI nr
Match: KAF2322165.1 (hypothetical protein GH714_008075 [Hevea brasiliensis])

HSP 1 Score: 107.5 bits (267), Expect = 1.1e-19
Identity = 63/118 (53.39%), Postives = 73/118 (61.86%), Query Frame = 0 

Query: 21  NGEEE---MSENANKLDSDGEIRDEGVTEDHVFSEGEQSVKDLRQSRERHPPTWMGDYVS 80
           NGEE+   ++    +    G  R E   E    SEGE  V++L+QSRER PP WMGDYVS
Sbjct: 206 NGEEQVLKVTSEGGRGRGRGTFRGETCDERDGSSEGEDRVRELQQSRERQPPMWMGDYVS 265

Query: 81  GE-----------VTLSTTEAEFVAAAVCACQAVWVKRILKEIGFSDEGLTIKLSKNS 125
           GE           VTLSTTEAEFVAAAVCACQ VW+KRILKE+G  D G T  +  NS
Sbjct: 266 GEGLSDDEVHMPIVTLSTTEAEFVAAAVCACQGVWIKRILKELGQFDGGCTTVMCDNS 323

[Close]
BLAST of CmUC08G146960 vs. NCBI nr
Match: KAA0033403.1 (retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 85.1 bits (209), Expect = 5.8e-13
Identity = 50/81 (61.73%), Postives = 62/81 (76.54%), Query Frame = 0 

Query: 20  ANGEEEMSENANKLDSDGEIRDEGVTED------HVFSEGEQSVKDLRQSRERHPPTWMG 79
           AN EE+++E+AN++D+D EIRDE VTE       H FSEGEQSV+D+RQS +RHPPTWMG
Sbjct: 30  ANEEEDINESANEIDNDEEIRDEEVTEQSVRDEGHGFSEGEQSVRDVRQSCKRHPPTWMG 89

Query: 80  DYVSGEVTLSTTEAEFVAAAV 95
           +YVSGE  LS  EA F+A  V
Sbjct: 90  EYVSGE-GLSEDEA-FMALGV 108

[Close]
BLAST of CmUC08G146960 vs. NCBI nr
Match: TXG65900.1 (hypothetical protein EZV62_007175 [Acer yangbiense])

HSP 1 Score: 79.7 bits (195), Expect = 2.4e-11
Identity = 81/276 (29.35%), Postives = 93/276 (33.70%), Query Frame = 0 

Query: 23  EEEMSENANKLDSDGEI---RDEGVTE-DHVFSEGEQSVKDLRQSRERHPPTWMGDYVSG 82
           EE +SEN N  ++DGE+   RDEGV E +   SEGE+ V++LRQSRER PPTWMGDYV G
Sbjct: 112 EEGVSENGNGENTDGEVGETRDEGVREKEDGSSEGEERVRELRQSRERQPPTWMGDYVCG 171

Query: 83  E----------------------------------------------------------- 140
           E                                                           
Sbjct: 172 EGLFEDEVHMALVVSTDPLCFEEAVKSFKISKDGNIDFVDETYYKQLVGSLMYLIATRPD 231

[Close]
BLAST of CmUC08G146960 vs. NCBI nr
Match: TXG46385.1 (hypothetical protein EZV62_028113 [Acer yangbiense])

HSP 1 Score: 77.8 bits (190), Expect = 9.3e-11
Identity = 81/285 (28.42%), Postives = 94/285 (32.98%), Query Frame = 0 

Query: 23  EEEMSENANKLDSDGEI---RDEGVTEDH-VFSEGEQSVKDLRQSRERHPPTWMGDYVSG 82
           EE +SEN N  +++GE+   RDEGV E+    SEGE+ V++LRQSRER PPTWMGDYVSG
Sbjct: 167 EERVSENGNGENTNGEVGETRDEGVREEEDGSSEGEERVRELRQSRERQPPTWMGDYVSG 226

Query: 83  E----------------------------------------------------------- 140
           E                                                           
Sbjct: 227 EGLFEDEVHMALVVSTDPLYFEEAVKSANWRLAMNSFKINRDGNGDFVDETYYKQLVGSL 286

[Close]
BLAST of CmUC08G146960 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 3.0e-04
Identity = 30/83 (36.14%), Postives = 44/83 (53.01%), Query Frame = 0 

Query: 59   DLRQSRERHPPTWMGDYVSGE------VTLSTTEAEFVAAAVCACQAVWVKRILKEIG-- 118
            D R+S   +  T+ G  +S +      V LSTTEAE++AA     + +W+KR L+E+G  
Sbjct: 1188 DNRKSSTGYLFTFSGGAISWQSKLQKCVALSTTEAEYIAATETGKEMIWLKRFLQELGLH 1247

Query: 119  ------FSDEGLTIKLSKNSIMH 128
                  + D    I LSKNS+ H
Sbjct: 1248 QKEYVVYCDSQSAIDLSKNSMYH 1270

[Close]
BLAST of CmUC08G146960 vs. ExPASy TrEMBL
Match: A0A6A6LNU9 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_028913 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 5.7e-22
Identity = 65/109 (59.63%), Postives = 72/109 (66.06%), Query Frame = 0 

Query: 51  SEGEQSVKDLRQSRERHPPTWMGDYVSGE-----------VTLSTTEAEFVAAAVCACQA 110
           SEGE  V++L+QSRER PP WMGDYVSGE           VTLSTTEAEFVAAAVCACQ 
Sbjct: 217 SEGEDRVRELQQSRERQPPMWMGDYVSGEGLSDDEVHMPIVTLSTTEAEFVAAAVCACQG 276

Query: 111 VWVKRILKEIGFSDEGL---------TIKLSKNSIMHGCWFVSKVGFYF 140
           VW+KRILKE+G  D G          TIKLSKN +MHG      V F+F
Sbjct: 277 VWIKRILKELGQFDGGCTTVMCDNSSTIKLSKNPVMHGRSKHIDVRFHF 325

[Close]
BLAST of CmUC08G146960 vs. ExPASy TrEMBL
Match: A0A6A6NBC0 (Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_008075 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 5.3e-20
Identity = 63/118 (53.39%), Postives = 73/118 (61.86%), Query Frame = 0 

Query: 21  NGEEE---MSENANKLDSDGEIRDEGVTEDHVFSEGEQSVKDLRQSRERHPPTWMGDYVS 80
           NGEE+   ++    +    G  R E   E    SEGE  V++L+QSRER PP WMGDYVS
Sbjct: 206 NGEEQVLKVTSEGGRGRGRGTFRGETCDERDGSSEGEDRVRELQQSRERQPPMWMGDYVS 265

Query: 81  GE-----------VTLSTTEAEFVAAAVCACQAVWVKRILKEIGFSDEGLTIKLSKNS 125
           GE           VTLSTTEAEFVAAAVCACQ VW+KRILKE+G  D G T  +  NS
Sbjct: 266 GEGLSDDEVHMPIVTLSTTEAEFVAAAVCACQGVWIKRILKELGQFDGGCTTVMCDNS 323

[Close]
BLAST of CmUC08G146960 vs. ExPASy TrEMBL
Match: A0A5A7SSH2 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00550 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 2.8e-13
Identity = 50/81 (61.73%), Postives = 62/81 (76.54%), Query Frame = 0 

Query: 20  ANGEEEMSENANKLDSDGEIRDEGVTED------HVFSEGEQSVKDLRQSRERHPPTWMG 79
           AN EE+++E+AN++D+D EIRDE VTE       H FSEGEQSV+D+RQS +RHPPTWMG
Sbjct: 30  ANEEEDINESANEIDNDEEIRDEEVTEQSVRDEGHGFSEGEQSVRDVRQSCKRHPPTWMG 89

Query: 80  DYVSGEVTLSTTEAEFVAAAV 95
           +YVSGE  LS  EA F+A  V
Sbjct: 90  EYVSGE-GLSEDEA-FMALGV 108

[Close]
BLAST of CmUC08G146960 vs. ExPASy TrEMBL
Match: A0A5C7I972 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_007175 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.2e-11
Identity = 81/276 (29.35%), Postives = 93/276 (33.70%), Query Frame = 0 

Query: 23  EEEMSENANKLDSDGEI---RDEGVTE-DHVFSEGEQSVKDLRQSRERHPPTWMGDYVSG 82
           EE +SEN N  ++DGE+   RDEGV E +   SEGE+ V++LRQSRER PPTWMGDYV G
Sbjct: 112 EEGVSENGNGENTDGEVGETRDEGVREKEDGSSEGEERVRELRQSRERQPPTWMGDYVCG 171

Query: 83  E----------------------------------------------------------- 140
           E                                                           
Sbjct: 172 EGLFEDEVHMALVVSTDPLCFEEAVKSFKISKDGNIDFVDETYYKQLVGSLMYLIATRPD 231

[Close]
BLAST of CmUC08G146960 vs. ExPASy TrEMBL
Match: A0A2N9H9R9 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39009 PE=4 SV=1)

HSP 1 Score: 78.2 bits (191), Expect = 3.4e-11
Identity = 44/69 (63.77%), Postives = 48/69 (69.57%), Query Frame = 0 

Query: 80   VTLSTTEAEFVAAAVCACQAVWVKRILKEIGFSDEGL---------TIKLSKNSIMHGCW 139
            VTLSTTEAEFVAAAVCACQ VW+KRILKE+G SD G          TIKLSKN +MHG  
Sbjct: 1207 VTLSTTEAEFVAAAVCACQGVWMKRILKELGHSDGGCTTVMCDNSSTIKLSKNPVMHGRS 1266

The following BLAST results are available for this feature:
BLAST of CmUC08G146960 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF2301756.11.2e-2159.63hypothetical protein GH714_028913 [Hevea brasiliensis][more]
KAF2322165.11.1e-1953.39hypothetical protein GH714_008075 [Hevea brasiliensis][more]
KAA0033403.15.8e-1361.73retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... [more]
TXG65900.12.4e-1129.35hypothetical protein EZV62_007175 [Acer yangbiense][more]
TXG46385.19.3e-1128.42hypothetical protein EZV62_028113 [Acer yangbiense][more]
BLAST of CmUC08G146960 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P109783.0e-0436.14Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
BLAST of CmUC08G146960 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6A6LNU95.7e-2259.63Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_028913 PE=4 SV=1[more]
A0A6A6NBC05.3e-2053.39Uncharacterized protein OS=Hevea brasiliensis OX=3981 GN=GH714_008075 PE=4 SV=1[more]
A0A5A7SSH22.8e-1361.73Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... [more]
A0A5C7I9721.2e-1129.35Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_007175 PE=4 SV=1[more]
A0A2N9H9R93.4e-1163.77Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS39009 PE=4 SV=1[more]
BLAST of CmUC08G146960 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..66

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC08G146960.1CmUC08G146960.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006259 DNA metabolic process
molecular_function GO:0016779 nucleotidyltransferase activity