CmUC08G146170 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC08G146170
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr08: 12059204 .. 12061085 (+)
RNA-Seq Expression	CmUC08G146170
Synteny	CmUC08G146170

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAACGGTAGACCAGCAGCGACGCACAACGAATGGGAACGAAATTCAACTGGCGAACGCGCGAACCGGATTACCGAGCACCCACAACTGGCCGGACGAAGACCACAAACGGCAAAGGTGGAGACCACGAACGACGCTGATGTCGCCTGGCTTTGGCAACGAGGTCTGTGTGCGAGAGAGAGAGTCAACAACACCAGCCACTAAGAAGAAGAAGAAAAAAAAATTAACTTTTTCTTTTATTTTTTTTATTTCCTTTCCATTTTCCCTCTTAAATCACCATAAAATAAATTGAAACTCCAAATAACTTCAAAATTAAATTTAAACTCCTAAATCTCCCGTCAATTATCCACGAATTAAATCCAAATTCAAATCTTTTAGTTAATCTAAATTGAATTATCTTCCCAAAACAATACAATTAAGTCTTGAAATTCAAACTACACCCCAAATAATTAAAGAGAATCAAATTAAGATTACCTAGAAATTTGGAATGTCACAAAAGCAAAGTTGCATTTCATATTTTCAAATTTGTATTTGGCAATAGATTCAAAAATTTAATTATAATTTAAAAAGTTGTTTAAAATGTGTTTGATATTTTATTTTATAAACTTGTAGTTACCTACTAAGATTTAGTTGACAATAAACTATTATTAGTTTATTTATAAATATGATTTATGTTAAATAATCACGTAATTCTTATTTTGTAGTATTATATAATTTATAGGACATTATATAATACATATTATACTTCTTTTAAAAAAATGAATTGAGTATATAATATGTCATATTGTATTTCTAAATGTTTTATCTTTATTTAATATAATTCAACATTTTAAAATGTGTTTGATGCTATATTTGCACTACCTGAACCACATAATTCGAAAATAATTTTTAAAAATAGAGTTAGGTTCTCTCCCAAATAGATATTTAAAAATATAAAATAGATTTCTAAAAAAAAAAAATCTAGAAATATAATATTTTGTAATTTATGCGGAATGAAAATTAGAATCGTGACGAAAAATGCATTTTCCCTTTTATAATTAAACCTTTTAAATCAAAAGAAATGAAAGAACGAAGGGCAGAGGGAGTGACAAAGAAGGAAGAACTGATAATGCAATGGAGATCGGATTCCTTGCAAAAGAAGAGCCCAAAATTTTTTGAAGAAGAAAATCAAGGTAAATCCATGGTTATCACCACAAACAGAGGATCCAACCCCGCAGAATCCACCATTCCTTCTGTTTCTACCTTCAAGATTCCATCCTTCTTTCTCAAAACCTTCCAAAAAAGATTCGATTACTGCAACACTAACAACGACGAAAAAGAAATTTCCAGCGACATCGAGAAGAAGAAGAAGTGCCTCATCGAATTTGCCTCTCTGTTCTACAAATTCTTCGGCGGATTCAAATTCTCGGCTTGCAGATTCGGAAGCAAGATCGATGGAGAACACCAAGATTCTTCAAGCGAATCGGAAGCCGAAGAAGAAGAATATCGCGACGAACGGGATGAAATTTTTTACGGATCGGAAACAAAGAAGAAACTTCTTAAAAACGAGAAGATCTCAAGCCAATTGAAACTTCCTGTATCAATCTTAGATGTATTTAGCAAGAAGAATGCGATGGATTTCAATTTCAGTTTCGTCAAGAGCAGAATCTGCAAGGGGAAAAATGGGAACAGAAACAGAAATCTCGATTACAACCAAAATCTCAGAGAAAATGAATCGGTTACTCGATTGAGCCGAGAAAATCTTAAGGGAGAACGGAAAAATTCAACGGCAATTTCATACCATGAAGATGATGAAAAGGGAGAACGATTATGGCAGAAAAGAATTCTAATGGGAGAGAGATGTAAACCTGTAATGCATACCTCTATAAGTCTTCGATAG

mRNA sequence

ATGGCAAACGGTAGACCAGCAGCGACGCACAACGAATGGGAACGAAATTCAACTGGCGAACGCGCGAACCGGATTACCGAGCACCCACAACTGGCCGGACGAAGACCACAAACGGCAAAGGTGGAGACCACGAACGACGCTGATGTCGCCTGGCTTTGGCAACGAGAAATGAAAGAACGAAGGGCAGAGGGAGTGACAAAGAAGGAAGAACTGATAATGCAATGGAGATCGGATTCCTTGCAAAAGAAGAGCCCAAAATTTTTTGAAGAAGAAAATCAAGGTAAATCCATGGTTATCACCACAAACAGAGGATCCAACCCCGCAGAATCCACCATTCCTTCTGTTTCTACCTTCAAGATTCCATCCTTCTTTCTCAAAACCTTCCAAAAAAGATTCGATTACTGCAACACTAACAACGACGAAAAAGAAATTTCCAGCGACATCGAGAAGAAGAAGAAGTGCCTCATCGAATTTGCCTCTCTGTTCTACAAATTCTTCGGCGGATTCAAATTCTCGGCTTGCAGATTCGGAAGCAAGATCGATGGAGAACACCAAGATTCTTCAAGCGAATCGGAAGCCGAAGAAGAAGAATATCGCGACGAACGGGATGAAATTTTTTACGGATCGGAAACAAAGAAGAAACTTCTTAAAAACGAGAAGATCTCAAGCCAATTGAAACTTCCTGTATCAATCTTAGATGTATTTAGCAAGAAGAATGCGATGGATTTCAATTTCAGTTTCGTCAAGAGCAGAATCTGCAAGGGGAAAAATGGGAACAGAAACAGAAATCTCGATTACAACCAAAATCTCAGAGAAAATGAATCGGTTACTCGATTGAGCCGAGAAAATCTTAAGGGAGAACGGAAAAATTCAACGGCAATTTCATACCATGAAGATGATGAAAAGGGAGAACGATTATGGCAGAAAAGAATTCTAATGGGAGAGAGATGTAAACCTGTAATGCATACCTCTATAAGTCTTCGATAG

Coding sequence (CDS)

ATGGCAAACGGTAGACCAGCAGCGACGCACAACGAATGGGAACGAAATTCAACTGGCGAACGCGCGAACCGGATTACCGAGCACCCACAACTGGCCGGACGAAGACCACAAACGGCAAAGGTGGAGACCACGAACGACGCTGATGTCGCCTGGCTTTGGCAACGAGAAATGAAAGAACGAAGGGCAGAGGGAGTGACAAAGAAGGAAGAACTGATAATGCAATGGAGATCGGATTCCTTGCAAAAGAAGAGCCCAAAATTTTTTGAAGAAGAAAATCAAGGTAAATCCATGGTTATCACCACAAACAGAGGATCCAACCCCGCAGAATCCACCATTCCTTCTGTTTCTACCTTCAAGATTCCATCCTTCTTTCTCAAAACCTTCCAAAAAAGATTCGATTACTGCAACACTAACAACGACGAAAAAGAAATTTCCAGCGACATCGAGAAGAAGAAGAAGTGCCTCATCGAATTTGCCTCTCTGTTCTACAAATTCTTCGGCGGATTCAAATTCTCGGCTTGCAGATTCGGAAGCAAGATCGATGGAGAACACCAAGATTCTTCAAGCGAATCGGAAGCCGAAGAAGAAGAATATCGCGACGAACGGGATGAAATTTTTTACGGATCGGAAACAAAGAAGAAACTTCTTAAAAACGAGAAGATCTCAAGCCAATTGAAACTTCCTGTATCAATCTTAGATGTATTTAGCAAGAAGAATGCGATGGATTTCAATTTCAGTTTCGTCAAGAGCAGAATCTGCAAGGGGAAAAATGGGAACAGAAACAGAAATCTCGATTACAACCAAAATCTCAGAGAAAATGAATCGGTTACTCGATTGAGCCGAGAAAATCTTAAGGGAGAACGGAAAAATTCAACGGCAATTTCATACCATGAAGATGATGAAAAGGGAGAACGATTATGGCAGAAAAGAATTCTAATGGGAGAGAGATGTAAACCTGTAATGCATACCTCTATAAGTCTTCGATAG

Protein sequence

MANGRPAATHNEWERNSTGERANRITEHPQLAGRRPQTAKVETTNDADVAWLWQREMKERRAEGVTKKEELIMQWRSDSLQKKSPKFFEEENQGKSMVITTNRGSNPAESTIPSVSTFKIPSFFLKTFQKRFDYCNTNNDEKEISSDIEKKKKCLIEFASLFYKFFGGFKFSACRFGSKIDGEHQDSSSESEAEEEEYRDERDEIFYGSETKKKLLKNEKISSQLKLPVSILDVFSKKNAMDFNFSFVKSRICKGKNGNRNRNLDYNQNLRENESVTRLSRENLKGERKNSTAISYHEDDEKGERLWQKRILMGERCKPVMHTSISLR

Homology

[Close]

BLAST of CmUC08G146170 vs. NCBI nr
Match: KAG6592883.1 (hypothetical protein SDJN03_12359, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 240.0 bits (611), Expect = 3.0e-59
Identity = 151/265 (56.98%), Postives = 181/265 (68.30%), Query Frame = 0


Query: 80  LQKKSPKFFEEENQGKSMVITTN-RGSNPAESTIPSVSTFKIPSFFLKTFQKRFDYCNTN 139
           L K  PK F+EE Q  S+VI TN  GS+PAEST PSVS  K+P+FFLK F+KRFDYC  N
Sbjct: 6   LHKIRPKEFQEETQEASVVIITNTTGSDPAESTTPSVSYLKVPTFFLKPFRKRFDYCTDN 65

Query: 140 NDEKEISSDIEKKKKCLIEFASLFYKFFGGFKFSACRFGSKIDGEHQDSSSESEAEEEEY 199
             EKE S +IE KKK L E AS+F K FGG K SAC  G KIDG+  D  SESEA  ++Y
Sbjct: 66  IKEKENSIEIE-KKKWLAEVASMFCKIFGGGKLSACGIGGKIDGDDDDFLSESEA-GDDY 125

Query: 200 RDERDEIFYG-----SETKKKLLKNEKISSQLKLPVSILDVFSKKNAMDFNFSFVKSRIC 259
           R++R+EIF       SET+  +  +EK SSQ +LP SILD+F K+N   FNF+F+KSRIC
Sbjct: 126 REDREEIFAAESNGESETENIIRSDEKSSSQSRLPTSILDLFRKRN---FNFNFIKSRIC 185

Query: 260 KGKNGNRNRNLDYNQNLRENESVTRL-SRENLK------------GERKNSTAISYHEDD 319
           K K+G RNRNL+Y +NLR NES     +REN K             + K STAISYHE D
Sbjct: 186 KVKSGYRNRNLNYEKNLRNNESAMLFANRENHKRLFQIPSKDRKQTKEKKSTAISYHEGD 245

Query: 320 EKGERLWQKRILMGERCKPVMHTSI 326
           E G+RLWQKRILMG RCKP+ +TSI
Sbjct: 246 ENGQRLWQKRILMGGRCKPLRNTSI 265

[Close]

BLAST of CmUC08G146170 vs. NCBI nr
Match: KAG6607704.1 (hypothetical protein SDJN03_01046, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-08
Identity = 49/98 (50.00%), Postives = 60/98 (61.22%), Query Frame = 0


Query: 80  LQKKSPKFFEEENQGKSMVITTN-RGSNPAESTIPSVSTFKIPSFFL----KTFQKRFDY 139
           L K  PK F+EE Q  S+VI TN  GS+PAEST PSVS  K+P+FFL    KTF+K+   
Sbjct: 6   LHKIRPKEFQEETQEASVVIITNTTGSDPAESTTPSVSYLKVPTFFLKKKKKTFRKKDSI 65

Query: 140 CNTNNDEKEISSDIEKKKKCLIEFASLFYKFFGGFKFS 173
                  K+ +S   +KKK L E AS+F K FGG K S
Sbjct: 66  TAPITSRKKKNSIEIEKKKWLAEVASMFCKIFGGGKNS 103

The following BLAST results are available for this feature:

BLAST of CmUC08G146170 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6592883.1	3.0e-59	56.98	hypothetical protein SDJN03_12359, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG6607704.1	1.4e-08	50.00	hypothetical protein SDJN03_01046, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmUC08G146170 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC08G146170 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC08G146170 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..201
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..43

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC08G146170.1	CmUC08G146170.1	mRNA