CmUC08G145340 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC08G145340
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	proline-rich protein 36-like
Location	CmU531Chr08: 6123244 .. 6126219 (-)
RNA-Seq Expression	CmUC08G145340
Synteny	CmUC08G145340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTTTGAAAATTCTCAGAATCCTTCTCTCAGAAGAGCTCGAAATGGAGGCTGGTTATGGTGAGGGAGAACTTGTGCAGAGCTTTCACCTCTTGAACTCGTTTCTCTCCTTTTGAATGGAGAAGCTTTGGGCTATTTATAGGCGTCGAAAACTTGAAACTCATGATGACCTGACACCTTTACATTAAATTCCATTCCCTGCTGCGCAGACTTTTCACATCGTTCAGCCCATTTGTTCTACCATGATCTGATAACGTGTTATCATTTTGCATATTGACATGACAGCTTTTGCCCAGGCGTCTGTATCTACTTTTTCTCAACGCATGGTCACAACGTATAGTCTCGACGCATGGGTTTCCACTTGTTCTCGCAGCAGCTTCGTCTCTAGTACTTGGGTTGTTTGTGCTTCTTTTCTTCTTAATCTTGCGTTAAGAACAGAAAAGCTCATAATTTTTCAGGTATTTTCTTTTGTAAATAGTGTCAACGCATGGTAATACATTTTACATAATTCAACTACCAAAATCATGCATTTAGCTCTAAAGTTACTCTAATTAATTCAAATAGAGACTATAATAACTTGTATTTCTACAAGCTATTACAAGACGTTACAAATTGGCCGCTTGCCATCATTTTTTATACTTACTTTATTTTCCAAGACTTTTTTATTTGTATTGAGATAGTGATTTCAAAAGACTTACAATTTCTTTAATATAAATCAGATTGTTACATATTTTCATTATTACGTATCACTTCCAACATCCATTGTGGCCAACTAATTTCTCAATGGGTTGAGTGGATGAAACTAACATTTTTCAAGTTTTGTTGGACAAAGCATGATCAACTGCTTGAGAGTGTAAGTGATTACAATTTTCATTTAAACAAGAAAAAAGTTAGCTTTAAAGATAAAGTTAGTCATTTGTTGAAAAGAAACTCTGCATGCATCTTAGAGATAAGATAGATGTGGCATCAAAGCTTCAAGAGATAAGTTCTCAATTTTGAGTTTAAGACATGAATGCTGCTTAAGTAATGCTTAGGAAAACGTTTGTGAAGTCTCCTCAACCCTACCATCTCCATTGAATTTCCCACAAATCAACGTCTGCTGTTTTGACTACTTATACTTGACATTTTCACTACCACTTTCCACGCAGCATCACACTCTATGTTCACCCATCCATTTTCATACTTGTATATTCATCTGTAATTAGTTTCTATAAAGCTTTTTCAACGCATTCTTTCAAACACATTCTTTATTATAAAATACCGCATCAAATCAAGAAAATTCTTAACATTAATTTCTTCAAATTCCTATGTTCGATCCTGGACTCTCCAGGTACCCTATTATAAACTTGCACTTGGGTTTTTAATAGGAAAAACTTGCATTTAACTAAACAAATTCTTTACATTCTCAACGTGAACTGATTATCAACACAACAAACATTATTTTAATTTGAAGTTTCAATTGAATATCGTAGTTTCTAAACAATGAATTTAATCTACACAATTAAATCCATTTTTTATGTTTCAAATATTCACGAAAGTTTCACTTTCTTTCACTATATATATCCAACAAGGAGCAATATTGCCATAATCAATTAAATTATGCTACTGTAGGGTTAGTACCTCATAGATCATCTTTTTACAATTGAATCTTGTATTTGACATTCTATTTGTAACCTAGACTTTGTTAATAGTTCATATAACCATTTTTCGGTCTTCACTACTATCTATTATTTCATTACCAAGCATATTTAGCTTCTAATTATTGATTTTTATGCTTAAAGTTCTAGCTTATTAATTACTTAAATAAATTTGTTAAAAAATTCCACTAAAAATTTCAAAATATTTTTATAAATTTTTGTGATATCCGTAATTTTTCTCAAAATATCTGTCGATATATCCATAAATCTGAGTTACTTATATTTATATCGATAACGATATATTTGTCCTTGCATGGCATTTTAAATAGAGTTTACTTTACATGTAAAATGAAGAATACAAATATACTTAGAAACTCTGAAAGACATCAAAAGTTTTTAAGATGCCTTATGTCTGGGCATCCTAAGATGTTGGGATATCTCAAAGTGTGGATGGATGTCCTATACTCATACAAAACAAATAACGTAAGTCATCAGATGACCATCTCATGAGAAGATGGGAATTTTGAATTTCAACCAACAATTGTCCTTTCATCCATTTTTAACATAAAAATATCTATTTACAGGTTAGAAACCAAATAGTTAAATTCAATGAAATTAAAAGATTTAGGTTGAAAATTAATTAGGATTTTCAAAATTTGGAGTTGTTTTCAAATATAGTAAAATGAGTCAAAATATTTATAAATATAGAAACATTTCACTGTCTGTTAACTGTGATAGACTTCTATCACTAGGCGCTAGACCGCCATAGAGTTTGAGGAACAAGACCGCCGTAGAGTTGGAGGAACAAGGAAAGTTTAATTTGAATGTTGAATTGAGTCCAAATAGAGTTTTGGTCAAAATTAGTGCATTTTGGACTCATACAATAGAATTGGTGAAAAAAGTAAGAGCAACAGAATTATTCAAAAGAAATATTCAAACCCTAATGTGAAGAAGCTGAGTCAAAGACAGATTTCTTTATTTAACAAATAAGTGGTGGAAAAATGAAAGGGCATGACAGTACTTTCACACAAACTTCTTTTAATATAAAAGTAGTGGCCATTGAATTAAAGAGGTTCATAAACCATAGACCCATTTTAAAGGATCAAGAGAGATTCAAAGTAATTTGCAGAAAAAAGAAAAATGGAGTCTTCAAGTTCAAGTCTTCAAAAGAGCAACAACGAGAATGTCAAAGCTCGCCGCCCACGACGGTCGGGGAACGCTGGCGCTGGCGGTCAGATTAACCGTCTTTCTCGATCAGCTCGAAGGACCGGCGGCAGTAAAACCAACCGTGGTCCTCCGCCGAAGATGAGCACTGGCGGCGGCGGTCAGACAAACTAA

mRNA sequence

ATGACTTTGAAAATTCTCAGAATCCTTCTCTCAGAAGAGCTCGAAATGGAGGCTGGTTATGCTTTTGCCCAGGCGTCTGTATCTACTTTTTCTCAACGCATGGTCACAACGTATAGTCTCGACGCATGGGTTTCCACTTGTTCTCGCAGCAGCTTCGTCTCTAGTACTTGGGTTGTTTGTGCTTCTTTTCTTCTTAATCTTGCGTTAAGAACAGAAAAGCTCATAATTTTTCAGAGCAACAACGAGAATGTCAAAGCTCGCCGCCCACGACGGTCGGGGAACGCTGGCGCTGGCGGTCAGATTAACCGTCTTTCTCGATCAGCTCGAAGGACCGGCGGCAGTAAAACCAACCGTGGTCCTCCGCCGAAGATGAGCACTGGCGGCGGCGGTCAGACAAACTAA

Coding sequence (CDS)

ATGACTTTGAAAATTCTCAGAATCCTTCTCTCAGAAGAGCTCGAAATGGAGGCTGGTTATGCTTTTGCCCAGGCGTCTGTATCTACTTTTTCTCAACGCATGGTCACAACGTATAGTCTCGACGCATGGGTTTCCACTTGTTCTCGCAGCAGCTTCGTCTCTAGTACTTGGGTTGTTTGTGCTTCTTTTCTTCTTAATCTTGCGTTAAGAACAGAAAAGCTCATAATTTTTCAGAGCAACAACGAGAATGTCAAAGCTCGCCGCCCACGACGGTCGGGGAACGCTGGCGCTGGCGGTCAGATTAACCGTCTTTCTCGATCAGCTCGAAGGACCGGCGGCAGTAAAACCAACCGTGGTCCTCCGCCGAAGATGAGCACTGGCGGCGGCGGTCAGACAAACTAA

Protein sequence

MTLKILRILLSEELEMEAGYAFAQASVSTFSQRMVTTYSLDAWVSTCSRSSFVSSTWVVCASFLLNLALRTEKLIIFQSNNENVKARRPRRSGNAGAGGQINRLSRSARRTGGSKTNRGPPPKMSTGGGGQTN

Homology

[Close]

BLAST of CmUC08G145340 vs. NCBI nr
Match: KAA0048493.1 (hypothetical protein E6C27_scaffold61G001060 [Cucumis melo var. makuwa] >TYK28285.1 hypothetical protein E5676_scaffold600G001020 [Cucumis melo var. makuwa])

HSP 1 Score: 56.2 bits (134), Expect = 2.5e-04
Identity = 36/56 (64.29%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 79  SNNENVKARRPRRSGNAGAGGQIN-RLSRSARRTGGSKTNRGPPPKMSTGGGGQTN 134
           +N+ N KA R R + NAG G  IN R SR  RRT GSK NR PPPK STGGGGQTN
Sbjct: 13  NNDSNAKAPRLRLTMNAGDGAHINPRHSRPPRRTRGSKINRAPPPKKSTGGGGQTN 68

[Close]

BLAST of CmUC08G145340 vs. NCBI nr
Match: XP_022930152.1 (proline-rich protein 36-like [Cucurbita moschata])

HSP 1 Score: 55.1 bits (131), Expect = 5.5e-04
Identity = 32/51 (62.75%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 79  SNNENVKARRPRRSGNAGAGGQINRLSRSARRTGGSKTNRGPPPKMSTGGG 130
           SNN+N KA   RR  N   G QINRLS  +RR  G+ TNRGPPPK STGGG
Sbjct: 11  SNNDNAKASYLRRRRNTVGGTQINRLSGPSRRANGTPTNRGPPPKKSTGGG 61

[Close]

BLAST of CmUC08G145340 vs. ExPASy TrEMBL
Match: A0A0A0KAN3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020130 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 2.4e-05
Identity = 37/57 (64.91%), Postives = 41/57 (71.93%), Query Frame = 0


Query: 78  QSNNENVKARRPRRSGNAGAGGQINRL-SRSARRTGGSKTNRGPPPKMSTGGGGQTN 134
           ++NN+N KA R R S NAG G QINR  SR  +R   SKTNR PPPK STGGGGQTN
Sbjct: 10  KNNNDNAKAPRLRLSMNAGDGTQINRRHSRPLQRNRNSKTNRAPPPKKSTGGGGQTN 66

[Close]

BLAST of CmUC08G145340 vs. ExPASy TrEMBL
Match: A0A5D3DY74 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001020 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.2e-04
Identity = 36/56 (64.29%), Postives = 39/56 (69.64%), Query Frame = 0


Query: 79  SNNENVKARRPRRSGNAGAGGQIN-RLSRSARRTGGSKTNRGPPPKMSTGGGGQTN 134
           +N+ N KA R R + NAG G  IN R SR  RRT GSK NR PPPK STGGGGQTN
Sbjct: 13  NNDSNAKAPRLRLTMNAGDGAHINPRHSRPPRRTRGSKINRAPPPKKSTGGGGQTN 68

[Close]

BLAST of CmUC08G145340 vs. ExPASy TrEMBL
Match: A0A6J1EPK7 (proline-rich protein 36-like OS=Cucurbita moschata OX=3662 GN=LOC111436664 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.6e-04
Identity = 32/51 (62.75%), Postives = 35/51 (68.63%), Query Frame = 0


Query: 79  SNNENVKARRPRRSGNAGAGGQINRLSRSARRTGGSKTNRGPPPKMSTGGG 130
           SNN+N KA   RR  N   G QINRLS  +RR  G+ TNRGPPPK STGGG
Sbjct: 11  SNNDNAKASYLRRRRNTVGGTQINRLSGPSRRANGTPTNRGPPPKKSTGGG 61

The following BLAST results are available for this feature:

BLAST of CmUC08G145340 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0048493.1	2.5e-04	64.29	hypothetical protein E6C27_scaffold61G001060 [Cucumis melo var. makuwa] >TYK2828...	[more]
XP_022930152.1	5.5e-04	62.75	proline-rich protein 36-like [Cucurbita moschata]	[more]

BLAST of CmUC08G145340 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC08G145340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAN3	2.4e-05	64.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G020130 PE=4 SV=1	[more]
A0A5D3DY74	1.2e-04	64.29	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1EPK7	2.6e-04	62.75	proline-rich protein 36-like OS=Cucurbita moschata OX=3662 GN=LOC111436664 PE=4 ...	[more]

BLAST of CmUC08G145340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..133

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC08G145340.1	CmUC08G145340.1	mRNA