CmUC08G144260 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC08G144260
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	single-stranded DNA-binding protein WHY2, mitochondrial
Location	CmU531Chr08: 3406369 .. 3414553 (-)
RNA-Seq Expression	CmUC08G144260
Synteny	CmUC08G144260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACAGACTTGGTCGGCCCGTGGAGGAGTGAACCCAGGCGTTGAAGCACGCGTCGGCGTCGGCTGGGAGAAGGCACGGGTTTCGCGATTTCTTTCTGCGATCTCGCAAGACGACCAGAGATCTGGCGTCGGTTGGGAGGCTGAGTGTTGTCCGGTGGTTGAGGCGAGACGACCGGCGAAGGTCTGGTGCGCGGTGGCGGCGGCAGCAGTAGATTAGGTTAGATTAGGGGTTTTTTTTCCAGAAAAAATTAGGGTTTCAAACAATAGACTTTGATACCATGCTAAAAATATATTTATTTCTCTTATTATTCTTTGTTAGACAAGGATTTTCTTAAATAGAAGAAAAACCATTACAAATAAGGAAAAAATAAATATAGCAAATATTTTCACAATAAATACAATGGAGAATATAAACATAAAAGGAAATAATCAACAATATATATAAAAATAAAAATAAAATGAAAAAATAATAAAAATAAAAAGAAGAAAAAAAGGAAAAAGAAATATGTAAATGAAGAAATAAAAAAAAAAAACTGTTTGGTGTATAATCTATTCTCTATAATTTTTAATTTGTGACCTTTACGTTTTCTCCATTATATGTTCTGAATTTGTAGATTAAAAATGCTACCTAGCCACATATTTTGGACCTATTTTCCTTTTATAGGTGCTGAGCTTAAGATTCAACTGATAAATCACATAATACTCCATGAAAGCAGGAGTCAGCTATTTGAACAAATTGTGTGTAAGAAAGTTGGTCATGTTGGACATCCTTTGGGGTCGCATCCTTTCTCATCTCGAGTTGGCTTTCCAGATTCGAGACAAAATTTTACTCATACAGGTACATTTCTTAGCAATGATGGTTTTATACATTTTTAAATTTAATCTGCTAGCAATATACTGTGTGTACATCTTAATGTTTCTACTTTGGTGTAAGTGCGGGCTTATGGTGTAGTGATATGAGATTAAATAATTTCAATAAATGATTAAATTTTCTCAAACATCATTCAGTCCTCACAATTCGTTCTAGCTCTCTCAAGTTATTTCCATCTCTTATCAATATTTTCTAAATCTTTGAGTCTTACTCTTTCAAGACGCATCTGTACGCTGTACTTTGGAGAATATTCTCTTATCTTTTATTTACATATATATAGGCAAACAAGAAACCCTAATCTAGGAAATGTACAATTACAATAAAGGATGACTATACATAATTATATGAATACATATTATAACAGCATTGACCCCTAACCATTTAAACCAAGGGCCTCTACACTTCTCTACAGGACTCAACATTCGATCCTTGATGATTTATACCCAAGGCCCTAATACTTACCTCAAGGCTTATCACACTGACTCTTGATTATTATACCTACGGCTTCAAAGCTCCTCTTTTTCAAATATTGGGATATCGACCACGGACCACCAACCATTTATACCCTAAGCCTCTACACCCAATGTGACATACTAGTCCTCGACCAATTATACTTGATGCCTTTATATTCCCTTATTTTCCTTAACACAATACCATCCCTTGACTATTTATACTCCTTATCACAAGGCCCTAATATTCTCCTTACTTTCCCTTATCACAAATCAAGGCCCTCTAATACCCCTTCTTTTTTTAACGAGAGACAAAATTTTTCATTGAACAAGAGTGAAAAGAGGTTGATGCTTAAAAATACAAACTCCACAAAGGAGTGAATGAAAGAAGTAGAACAAACACAGAACCAGTATAGAAACCCAATGAAGAACAAAATACAGAAAAGAAACTCCCTGCGAACAAGACAAAGATAAATTTGCAAAGAAGAGTCGGAAAGATCAAATAGAACAGACTCCGAAGGGGGATCAGAGGGCTTGAGTTTGGGCAGGTCATGCTTTTATACAGAACTTGAAGGGTCTCAAAATCTGTCATTTGGACACCATGTAATGCAACAGATGTATTAAACATGCATAGAATACTTGTTAAGTATACTAAAAAGACACTTATATAACAATAATAATAAATTTTGAGTGTGAAATACGTCAAACTAATTTTTTAAGCCCAATGCATCTACCCATTTACTTTGGATTTTCTTTTGGTATAAAAATGATGTATATTTAAAAAAATGTATATTCTAATAAACGTGTCCTTGTCATGTCTGTGTCCTAAATTTTTAAAAAATGATGTGTCCCTGTGTTCGTGTCGCCATGTCTCATATCCGTATCTATGCTTCTTAGCTAACATCGAAACCCCTACAAAAACCCTCAGCTTGTCCCTGTGCTAGTCCAATATTTCTTTTCATTGTCCTCTTGACCATTTGTTCTCGATGAATTTCTTTCATTACCCCTTCTCACATAAGTATGCAAAATTGGAGGTCTCACACAATAGTTACCTTGATAAGGTGAGAGATTGGGTCAATAAGGTGGGGCGTGAGATGCGCGACGACATATCTTGACCTCCTCCTTGGAGAATATCCCGGGCAAATTTCTTTTTGGAGTATTGTGGAGGATAAAGTGAGAAAGAGATTGGCCTCTTGGAAGAAAAGTTCTTCTGAGAAGGAGGGAGACTTACTCTTATTTGTTTAATTTAAGTGGTATCTCCATTTACTTTTTCTCCCTCTTTAGAGCCTAGTGCATGTGGTGTAAGAGCTTGAAAAAGCTCATGAGAGACCTCATGAGAGAAGGTGTGGAGGAAGGAAAAGGAGTTCACATGGTGAATTGGGAGATCGTTGGGAAATCCATTCACTTAGGAGAGTTGGAATTAGAGAATTTAAAACTCGTAATACGGCGCTATTGGTAAAATGATTATGTCGTTTTTCCTTTGAGTCCTCTTCCCAGTGATCTAAGATTATTGTGAGCAAGTACGATTCTCATCCTTATGATTGGATGTTGGGTGGGGTTAAAGGCACATCTAAAAATTGTGGAAAGAAATATCTTCAGAGCTCCCGTTGGGGGGATTGTCCCTCGTGCAACATATCTAACCTTTATCATTTATTTGCTATGAAAAAATTGTTACGTTGTTGATATTCATTGTATTCAAGGAGCCCTTACCCTCTTTTTGGCTTTCGTTGTCCTTGGTCCAATGGGAAAACAACGGAAGTTTTGGCCCTCCTTTCCTTTCTAGGTGATGTTGAGCAAAAAAGGGAAAGAAAAAAAAGTGATGTTCTTTGTCTAACAGATTGTTAACCTAATAAATAAAAAGGAGGAAAATTTTAGGGCTCTTTTGAAATCCAATTTTTTCCCTTTTTTTTTTTTTTCCAAATTTCAAAAACCAACTTAAACGCCTAAAAGATTTGGAAAGATTCTAATTGAAAAAGGATTTTATTTTCATTTTTAAACTTCAAAATAACATCTAAAATTAAATGCCTAAACATTATAATTTAAGATTCAATAAAAAAATTTCTTCTAGAATTTTCAGAAATTTAGTTTATCTAATAAAAAGGGCTAAATTTAATTCTAATTTCTTAAATTAGAATCCATAAACAGATAAGTCCAATTAATCTAAAATTAACGGATCAGAAGGGATTTCAAATAATATTTTTAACTCCAAAATAATCTAATTTTGAAATGCAGGACACTGTAAGACATGTTTGGGAGTGACTTTAAAATGGCTAAAATCTCTTTTGTCATTTTCAAAATCATCGTGAAACATGTTTTTAATTCTTCAAACCTAATTTTGGGATATGAAAATTGCATAAAAGTGTAAAATTGAAAACTAAATTAATTTTGAGTGATTAAAAATGTGTTTTCGAGTGATTTAAAAAATGATAAAAGTGATTTTGACGATTGTAAAATCACTCCGAAACATACCCTTAGTGTCTCTAAAAGATTTTATTAATTACTCCTATTTCTTTCAATCTGTATGTCAAATCAGTACTCTGTATTGTATTTCTCTTCCAAGTTTCAAAACATCAGTTTATTACGTGTATAATGGCCCTTTCTTTTTCTTTTTTTGGCTCTTTCAGTCACAAAGAATGCAAGTGATCGAGTTTATGCTGCTTATAATGTATATAAGGGAAAAGCTGGACTCTCTATGAAGCCTTGCTTGCCAACTTTCACTAAATTAGAGGTATATAATCATAACTATATATATAGTATCTATGCATGCATATATTTATTTATTTATAACAAGTAAAAAGCAATTTTGTTTTCACTCTTTGTATTATAGTCTGGGAGTCTTGTAATTGATCGACGTGGCTCAGTAATGCTGTCATTCTTTCCTGCCATAGGCGAGCGCAAGTATGACTGGACAAAGAAACAGGTTACTTTTCATTCTCTGTTTTTTGTATTTGTAGTCCAGATGTTCACTAGAAGTCTCCCTTGATTGTAATGTCTGTAACTTCCATAACCACCATAAGTTGGCCTACTGGTAAAAAAGGGTCATGGTTTAATTAAGGACATTGGAAGAATGGGTTCAATCCATGGTGGTCATCTATTTATGATTTAATATCTTATATGTTTCCTTGACACCTACATATAGTAGGGTTAGACGAGTTGCTTGTAAGATTAGTCAAGGTGCGCGTAAATTAGCCTAGACGCTCGTGGTTATATATAAATAAATAAATCAATAAAACAAATTGTAATTTTAATGATTACAAGCATTTAGGAGAATAGATACATCCTCTATTGTAATATCATTAACTTTCATGATACACACTAATTGGGATGGAAGTAGGTCGAAAAAGAGGATTCTCTTTTTAGAAGTCCTGAAAAATTCTATCAACCTCCTGCTACTGTCCGAAATGTTCCCCTAACCCAGTTCACCTATTTCACTTGAGAGACTTACATATGGAGTTATACAACACCTTTCCTGATTGATTCAATTAATATCTTGCAGTTGTTTGCATTGTCTCCAACAGAAGTTGGTACTTTAATCAGTTTGGGTCCCAGAGATTCATGCGAATTCTTCCATGACCCTGGAATGCTTTCCAGGTTGGTTCCATAGTAACAACATTGCAGTCTAAACATTGCTGTATTTCCCTGAAGCATTTGAAATTTATGCAGCATAGTCTAATAAAATATCGTTCCTACTTCAGATACAAATACAATATAATACCCATTTCTTATGAAAATAAATAGAAGTCATGTCAAATAAACAAATAAATGAATAAAAACAAATAAAAGCAGGCTGCTTCAATAATGACCCTCTATGAACAAAAACCAACTAAATATTTTATATTCAGTAATTTTGGTTTATTTTGTTGAGTAATTTCTTGCAGTACTGCTGGTCAAGTAAGGAAGAGCTTAACAATTAAGGCCCATGCAGATGGCAATGGCTATTTCATCTCTTTGAGTAAGGATACAAACATATTATGAAAATATAGTGTATTTGTTACTTTTTATGACCGTTACCACGCTCTTTGCAAATATTTTCATTAGATTGTAGGTATTTTTACAAAAATTCAATCGTCTAATCAAGCTTCTTAATTAGAATGTGCTCACAAAGGGAAAAGTTCACTGCTGAAGTCAGTTAATTAAAAGATCAGATACGGCTGCATGACTTGTTACACAAGATTGAATTAGAATGATTTACCTGCCCTACTATGAACTCTGTGTGTGGGCACCTTTTCCTAATTGTTCTTAGCTGCTTCCTCTGGTACATATGAAATGAGAGTTGGAATTTGCAATCTCATGTTTTCCAATTGGGATGTTGGAGAGAGCAAATCGGGACTCTGCAGATTAGATATGTGAGCTTATTTTTGTTATCTATAAGATCTTATTCAGTAATCATCCGTTTGCTGTCCTGGTGGCAGCTCAACTTTATTCTTCCATATCCTAGTACTGATGCTTGGTTTTCATTTTCTTTATAATCTATTTTTCTTGATCAACTTATCTGCGCCATTCCTGTGAAAAACTTACCAGGAGCTGAATTTATCTTCTTCCCATTTCTGCAGATGTTGTTAATAACTCACAAAACACCAAAGATTTCTTGAGTGTTCCCTTCACAGCAGGCGAATTTTCTGTGATGAAGACGGCTTGCAGTGTATGAATTGAATCTCTAATTTGTCTTTAGGCCATTAGAATATCTTTTATCCCTTTTTCCTTTTGGTTTGTGAATATTTGACATACGATGCATTTAGGTGAAGCGTCATCATTTTTGAGCTAGTTAAGCAGATTGTCATCTAGTAGATGATCTTGTCATATAGCAAAAAACAACAGAAGAACAAAGAAAGAGAACAGGAATAGCAGCCTACGCAATAGAACGAGCTATAAAACCTAGTTGCTTTTGTGATTGCATAGCCTTAAAATATTAAATATCAAATGAGTTAGGCCAAATATAATAAAGTTTAGTGGTGGTCTTGTAGGATTAGTTGGAGTGCTCGTAACTCGTAAATTTGTTTGATCACCATGGTCATAAATATAGTTTGCAAGTAGGAACATCTGGACTTTGCCTTTGGACGTGTTAATGTTCTATCCCTCACCTTCGTCTTTTTAGGGTATTCATTGGTCCTCCATTTGCACGTAATATTTGTGAAATTTATTGCTTGGTTTTAAGTAGGTACTGTTCAGATTTTGATGCTTTAAAGTGAGTGCACCATTACCAATGCTATGGTACTTGGGATTCACAGCATCCCTTGGGTTTCTATGATGAAAATTATAAACCCCAAGAACTTATCCAGATTCTGATAGGAATTGAAAAGGAAGAAAAAGATAGAAATGATAGAATGAGAATCTTATTCAATATCAAGTATAATATGATGTCCAGGTACAATTCTCAGCCCACACAGAGAACAGAGCCCTCTCTCCCAAGATCAATTCTACCAAAACGTACCCGCGTCTAAACTCCCTCTCCCCCACATATATTCTCTCCTTCCAACTAACTGTGGGGCCCACCCTCTCTCTACTGGTGGCTGAAGCAACACTCCCCATTATATAGGCCATTCCCTTTTTACCCCTCGACAGAATTGGTGGCCTATCAGATTCTTCTGTTGTTAACAGTATTCTCTTATTACCTGACTGTATCCCAGGCATATGTCTTCATCTCTAGCCTAAAAAATATGTTATACTTATTTTCTTTTAACCCCTCATAATTTCAAAATTTTTCTATTTTGAATCTTTTGAACTTTTCTAAATTTTGTTTAGTTTTCATTATTGCATTTAATAAAAGTCATAGGTAGCACACATGCAGTTATGCTGTAAGATAATATATGCAATCTGATCTCGAATTTAGAAATGGGTGACTTAAGATTTTATTGAATCCAATTGAACTTTAACGTAAATACTACAAAAAAATGAAAGTTTGGAGACTAAAAACGAAATATTTGGATCTATTAGGGGTGTTTAGGCAGTAGGTGTGGCATCTTAAGCTTGGAGTTGGGTAGCCTGGGGGATAGATTCTGGGGAGTTGTGTAGCCTGGATTTTGGTAGTCTATGTTTTGGGGTGCAAGTTTGTGTAGCCTGGGTTTGAGAAAAATGGGAAATGTGAAATGTGAAATGGTGGGACTCCCATAATTATGAGAAAAATGGAGAGTGAAATGTTGTACCTAAGGTTTTGATGATTTACTTTGAACTTAGAAAATCGTGCTCCAAACCCACCCTACCCCATGGGCCAAACAGACCTATAAGGACCAACAAATGAGGTATATATAGCATAATTGAACTCATGTTATCTTCGCTGTGTTCATTGCATTGCTGGCAGATTTGAGTGGTACATGTCCCTTGTATGCTAGATATTTTCTTCCTTTCCAATCCATCATTTTGGGTGTATAACTTGTTTATGTTTTATTCTTCTGACGTTCTCTTAGTTTGCTCTGCCTCACATTCTTGGTTGGGACCGGCTGACCCAGCCTAATCCTGGCATGGGTAAGGATTTTCAACCAAATAAGGTGGATCGTGAAGCATTGAGTTTAGAGTGGGAAAGATGAGTGTTCATAGAAGTTGTCACCTCCATGAAGCTGCTAAGTTGAAAAGTAAGCTATTGTACCTGTTTCCTGAGGTAACCTTTTGTCAGCTCTTCAACTATTGTAATGATGGATGTATCCTTTTAGAAATTTGCTTTCAGAAACTCTAGCTGGTGTCAGAGTACTTAATAATTGTTGGTATCTGAAAGGCAGCGGTTTATTCGGATGGAACTTACTATTTCAAAAACTGAAATAACAATGTACTCGAGTACTATTTAAACTTAGGGTTAGTTTTTACGATATGTGGGAAGGGGAATCGAACAACCTCAAACACTATATTCAAGCTATGCTCATTTTGACAAC

mRNA sequence

ATGGCACAGACTTGGTCGGCCCGTGGAGGAGTGAACCCAGGCGTTGAAGCACGCGTCGGCGTCGGCTGGGAGAAGGCACGGGTTTCGCGATTTCTTTCTGCGATCTCGCAAGACGACCAGAGATCTGGCGTCGGTTGGGAGGCTGAGTGTTGTCCGGTGGTTGAGGCGAGACGACCGGCGAAGGTCTGGAGTCAGCTATTTGAACAAATTGTGTGTAAGAAAGTTGGTCATGTTGGACATCCTTTGGGGTCGCATCCTTTCTCATCTCGAGTTGGCTTTCCAGATTCGAGACAAAATTTTACTCATACAGTCACAAAGAATGCAAGTGATCGAGTTTATGCTGCTTATAATGTATATAAGGGAAAAGCTGGACTCTCTATGAAGCCTTGCTTGCCAACTTTCACTAAATTAGAGTCTGGGAGTCTTGTAATTGATCGACGTGGCTCAGTAATGCTGTCATTCTTTCCTGCCATAGGCGAGCGCAAGTATGACTGGACAAAGAAACAGTTGTTTGCATTGTCTCCAACAGAAGTTGGTACTTTAATCAGTTTGGGTCCCAGAGATTCATGCGAATTCTTCCATGACCCTGGAATGCTTTCCAGTACTGCTGGTCAAGTAAGGAAGAGCTTAACAATTAAGGCCCATGCAGATGGCAATGGCTATTTCATCTCTTTGAATGTTGTTAATAACTCACAAAACACCAAAGATTTCTTGAGTGTTCCCTTCACAGCAGGCGAATTTTCTGTGATGAAGACGGCTTGCAGTTTTGCTCTGCCTCACATTCTTGGTTGGGACCGGCTGACCCAGCCTAATCCTGGCATGGGTAAGGATTTTCAACCAAATAAGGTGGATCGTGAAGCATTGAGTTTAGAGTGGGAAAGATGAGTGTTCATAGAAGTTGTCACCTCCATGAAGCTGCTAAGTTGAAAAAAATTTGCTTTCAGAAACTCTAGCTGGTGTCAGAGTACTTAATAATTGTTGGTATCTGAAAGGCAGCGGTTTATTCGGATGGAACTTACTATTTCAAAAACTGAAATAACAATGTACTCGAGTACTATTTAAACTTAGGGTTAGTTTTTACGATATGTGGGAAGGGGAATCGAACAACCTCAAACACTATATTCAAGCTATGCTCATTTTGACAAC

Coding sequence (CDS)

ATGGCACAGACTTGGTCGGCCCGTGGAGGAGTGAACCCAGGCGTTGAAGCACGCGTCGGCGTCGGCTGGGAGAAGGCACGGGTTTCGCGATTTCTTTCTGCGATCTCGCAAGACGACCAGAGATCTGGCGTCGGTTGGGAGGCTGAGTGTTGTCCGGTGGTTGAGGCGAGACGACCGGCGAAGGTCTGGAGTCAGCTATTTGAACAAATTGTGTGTAAGAAAGTTGGTCATGTTGGACATCCTTTGGGGTCGCATCCTTTCTCATCTCGAGTTGGCTTTCCAGATTCGAGACAAAATTTTACTCATACAGTCACAAAGAATGCAAGTGATCGAGTTTATGCTGCTTATAATGTATATAAGGGAAAAGCTGGACTCTCTATGAAGCCTTGCTTGCCAACTTTCACTAAATTAGAGTCTGGGAGTCTTGTAATTGATCGACGTGGCTCAGTAATGCTGTCATTCTTTCCTGCCATAGGCGAGCGCAAGTATGACTGGACAAAGAAACAGTTGTTTGCATTGTCTCCAACAGAAGTTGGTACTTTAATCAGTTTGGGTCCCAGAGATTCATGCGAATTCTTCCATGACCCTGGAATGCTTTCCAGTACTGCTGGTCAAGTAAGGAAGAGCTTAACAATTAAGGCCCATGCAGATGGCAATGGCTATTTCATCTCTTTGAATGTTGTTAATAACTCACAAAACACCAAAGATTTCTTGAGTGTTCCCTTCACAGCAGGCGAATTTTCTGTGATGAAGACGGCTTGCAGTTTTGCTCTGCCTCACATTCTTGGTTGGGACCGGCTGACCCAGCCTAATCCTGGCATGGGTAAGGATTTTCAACCAAATAAGGTGGATCGTGAAGCATTGAGTTTAGAGTGGGAAAGATGA

Protein sequence

MAQTWSARGGVNPGVEARVGVGWEKARVSRFLSAISQDDQRSGVGWEAECCPVVEARRPAKVWSQLFEQIVCKKVGHVGHPLGSHPFSSRVGFPDSRQNFTHTVTKNASDRVYAAYNVYKGKAGLSMKPCLPTFTKLESGSLVIDRRGSVMLSFFPAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGWDRLTQPNPGMGKDFQPNKVDREALSLEWER

Homology

[Close]

BLAST of CmUC08G144260 vs. NCBI nr
Match: XP_038891064.1 (single-stranded DNA-binding protein WHY2, mitochondrial [Benincasa hispida])

HSP 1 Score: 444.9 bits (1143), Expect = 5.4e-121
Identity = 210/231 (90.91%), Postives = 221/231 (95.67%), Query Frame = 0


Query: 64  SQLFEQIVCKKVGHVGHPLGSHPFSSRVGFPDSRQNFTHTVTKNASDRVYAAYNVYKGKA 123
           +QLFEQIVCKK GHVGHPLGSHPFSSRVG PDSRQNFT TV +NASDRVYAAY+VYKGKA
Sbjct: 11  NQLFEQIVCKKAGHVGHPLGSHPFSSRVGIPDSRQNFTRTVGENASDRVYAAYSVYKGKA 70

Query: 124 GLSMKPCLPTFTKLESGSLVIDRRGSVMLSFFPAIGERKYDWTKKQLFALSPTEVGTLIS 183
           GLSM PCLPTFTKLESG LVI RRGS+ML+FFPAIGERKYDWTKKQLFALSPTEVGTLIS
Sbjct: 71  GLSMMPCLPTFTKLESGCLVIGRRGSIMLTFFPAIGERKYDWTKKQLFALSPTEVGTLIS 130

Query: 184 LGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFT 243
           LGPRDSCEFFHDPGMLSS+AGQVRKSLTIKAHADGNGYFISLNVVNNS+NTK+FLSVPFT
Sbjct: 131 LGPRDSCEFFHDPGMLSSSAGQVRKSLTIKAHADGNGYFISLNVVNNSENTKNFLSVPFT 190

Query: 244 AGEFSVMKTACSFALPHILGWDRLTQPNPGMGKDFQPNKVDREALSLEWER 295
           AGEFSVMKTACSF LPHILGWD+L +P+PGMGK FQPNKVDREALSLEWER
Sbjct: 191 AGEFSVMKTACSFVLPHILGWDQLKKPSPGMGKVFQPNKVDREALSLEWER 241

[Close]

BLAST of CmUC08G144260 vs. NCBI nr
Match: XP_022157229.1 (single-stranded DNA-bindig protein WHY2, mitochondrial isoform X2 [Momordica charantia])

HSP 1 Score: 428.3 bits (1100), Expect = 5.3e-116
Identity = 204/232 (87.93%), Postives = 218/232 (93.97%), Query Frame = 0


Query: 64  SQLFEQIVCKKVGHVGHPLGSHPFSSRVGFPDSRQNFTHTVTKNASDRVYAAYNVYKGKA 123
           +QLFEQIVCKK G+VGHP GSH FSSRVG PDSRQNFT TVTKNA DRVYA+YNVYKGKA
Sbjct: 14  NQLFEQIVCKKSGNVGHPFGSHSFSSRVGIPDSRQNFTQTVTKNAGDRVYASYNVYKGKA 73

Query: 124 GLSMKPCLPTFTKLESGSLVIDRRGSVMLSFFPAIGERKYDWTKKQLFALSPTEVGTLIS 183
           G+SM PCLPTFTKL+SG+LVI RRGSVML+FFPAIGERKYDWTKKQLF+LS TE+GTLIS
Sbjct: 74  GVSMMPCLPTFTKLDSGNLVISRRGSVMLTFFPAIGERKYDWTKKQLFSLSATEIGTLIS 133

Query: 184 LGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFT 243
           LGPRDSCEFFHDPGMLSSTAGQVRKSLTIK+HADGNGYFISLNVVNN QNTK+FLSVPFT
Sbjct: 134 LGPRDSCEFFHDPGMLSSTAGQVRKSLTIKSHADGNGYFISLNVVNNMQNTKEFLSVPFT 193

Query: 244 AGEFSVMKTACSFALPHILGWDRLTQP-NPGMGKDFQPNKVDREALSLEWER 295
           AGEFSVMKTACSFALPHILGWD+LT+P + GMGK  QPNKVDREALSLEWER
Sbjct: 194 AGEFSVMKTACSFALPHILGWDQLTRPSHQGMGKVVQPNKVDREALSLEWER 245

[Close]

BLAST of CmUC08G144260 vs. NCBI nr
Match: XP_022973421.1 (single-stranded DNA-binding protein WHY2, mitochondrial [Cucurbita maxima])

HSP 1 Score: 415.6 bits (1067), Expect = 3.5e-112
Identity = 198/231 (85.71%), Postives = 213/231 (92.21%), Query Frame = 0


Query: 64  SQLFEQIVCKKVGHVGHPLGSHPFSSRVGFPDSRQNFTHTVTKNASDRVYAAYNVYKGKA 123
           +QLFEQ+VCKK  HV H  GSHPFSS VG P  RQNFTHTV KN +DRVYAAYNVYKGKA
Sbjct: 11  NQLFEQVVCKKAVHVDHAFGSHPFSSGVGIP--RQNFTHTVPKNENDRVYAAYNVYKGKA 70

Query: 124 GLSMKPCLPTFTKLESGSLVIDRRGSVMLSFFPAIGERKYDWTKKQLFALSPTEVGTLIS 183
           G+SM PCLPTFTKL+SGSLV+DRRGSV+L+FFPAIGERKYDWTKKQ F+LSPTEVGTLIS
Sbjct: 71  GVSMFPCLPTFTKLKSGSLVVDRRGSVLLTFFPAIGERKYDWTKKQYFSLSPTEVGTLIS 130

Query: 184 LGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFT 243
           LGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVNN+Q+TK+FLSVPFT
Sbjct: 131 LGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVNNTQSTKEFLSVPFT 190

Query: 244 AGEFSVMKTACSFALPHILGWDRLTQPNPGMGKDFQPNKVDREALSLEWER 295
           AGEFSVMKTACSFALPHILGWDRLT+P+  M K FQPNKV+RE LSLEWER
Sbjct: 191 AGEFSVMKTACSFALPHILGWDRLTKPSLRMEKGFQPNKVNREGLSLEWER 239

[Close]

BLAST of CmUC08G144260 vs. NCBI nr
Match: KAG6607541.1 (Single-stranded DNA-binding protein WHY2, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7037183.1 Single-stranded DNA-bindig protein WHY2, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 414.8 bits (1065), Expect = 6.0e-112
Identity = 196/231 (84.85%), Postives = 213/231 (92.21%), Query Frame = 0


Query: 64  SQLFEQIVCKKVGHVGHPLGSHPFSSRVGFPDSRQNFTHTVTKNASDRVYAAYNVYKGKA 123
           +QLFEQ+VCKK GHV H  GSHPFSS VG P   Q FTHTV KN +DRVYAAYNVYKGKA
Sbjct: 11  NQLFEQVVCKKAGHVDHAFGSHPFSSGVGIPG--QKFTHTVPKNENDRVYAAYNVYKGKA 70

Query: 124 GLSMKPCLPTFTKLESGSLVIDRRGSVMLSFFPAIGERKYDWTKKQLFALSPTEVGTLIS 183
           G+SM PCLPTFTKLESGSLVIDRRGS++L+FFPAIGERKYDWTKKQ F+L+PTEVGTLIS
Sbjct: 71  GVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSLNPTEVGTLIS 130

Query: 184 LGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFT 243
           LGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVV+N+Q+TK+FLSVPFT
Sbjct: 131 LGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVDNTQSTKEFLSVPFT 190

Query: 244 AGEFSVMKTACSFALPHILGWDRLTQPNPGMGKDFQPNKVDREALSLEWER 295
           AGEFSVMKTACSFALPHILGWDRLT+P+ GM K FQPNKV+RE LSLEW+R
Sbjct: 191 AGEFSVMKTACSFALPHILGWDRLTKPSLGMEKGFQPNKVNREGLSLEWKR 239

[Close]

BLAST of CmUC08G144260 vs. NCBI nr
Match: XP_023523845.1 (single-stranded DNA-binding protein WHY2, mitochondrial [Cucurbita pepo subsp. pepo])

HSP 1 Score: 413.3 bits (1061), Expect = 1.7e-111
Identity = 195/231 (84.42%), Postives = 213/231 (92.21%), Query Frame = 0


Query: 64  SQLFEQIVCKKVGHVGHPLGSHPFSSRVGFPDSRQNFTHTVTKNASDRVYAAYNVYKGKA 123
           +QLFEQ+VCKK GHV H  GSHPFSS VG P   Q FTHTV KN +DRVYAAYNVYKGKA
Sbjct: 11  NQLFEQVVCKKAGHVDHAFGSHPFSSGVGIPG--QKFTHTVPKNENDRVYAAYNVYKGKA 70

Query: 124 GLSMKPCLPTFTKLESGSLVIDRRGSVMLSFFPAIGERKYDWTKKQLFALSPTEVGTLIS 183
           G+SM PCLPTFTKLESGSLVIDRRGS++L+FFPAIGERKYDWTKKQ F+LSPTEVGTLI+
Sbjct: 71  GVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSLSPTEVGTLIN 130

Query: 184 LGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFT 243
           LGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVV+N+++TK+FLSVPFT
Sbjct: 131 LGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVDNTKSTKEFLSVPFT 190

Query: 244 AGEFSVMKTACSFALPHILGWDRLTQPNPGMGKDFQPNKVDREALSLEWER 295
           AGEFSVMKTACSFALPHILGWDRLT+P+ GM K FQPNKV+RE LSLEW+R
Sbjct: 191 AGEFSVMKTACSFALPHILGWDRLTKPSLGMEKGFQPNKVNREGLSLEWKR 239

[Close]

BLAST of CmUC08G144260 vs. ExPASy Swiss-Prot
Match: D9J034 (Single-stranded DNA-binding protein WHY2, mitochondrial OS=Solanum tuberosum OX=4113 GN=WHY2 PE=1 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 9.8e-65
Identity = 121/210 (57.62%), Postives = 153/210 (72.86%), Query Frame = 0


Query: 85  HPFSSRVGFPDSRQNFTHTVTKNASDRVYAAYNVYKGKAGLSMKPCLPTFTKLESGSLVI 144
           H  ++  GF   RQN      K    RV+A Y+V+KGKA LS +P LPTF +L+SG + +
Sbjct: 31  HAINTFAGFSTVRQNVVADAGKR-EGRVFAPYSVFKGKAALSAEPRLPTFNRLDSGGVKL 90

Query: 145 DRRGSVMLSFFPAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSTAG 204
           +RRG +ML+F+P++GERKYDW K+QLFALS TEVG+LIS+G RDS EFFHDP MLSS AG
Sbjct: 91  NRRGVIMLTFWPSVGERKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPSMLSSNAG 150

Query: 205 QVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGW 264
           QVRKSL+IK +ADG+GYFISL+VVNN+  T D  +VP T  EF+VM+TA SFALPHI+GW
Sbjct: 151 QVRKSLSIKPNADGSGYFISLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGW 210

Query: 265 DRLTQPNPGMGKDFQPNKVDREALSLEWER 295
           DR T   P       P+KV  + +  EW+R
Sbjct: 211 DRFTN-RPSESISQSPSKVVPQLMEAEWDR 238

[Close]

BLAST of CmUC08G144260 vs. ExPASy Swiss-Prot
Match: Q8VYF7 (Single-stranded DNA-binding protein WHY2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WHY2 PE=1 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.1e-60
Identity = 108/160 (67.50%), Postives = 135/160 (84.38%), Query Frame = 0


Query: 109 SDRVYAAYNVYKGKAGLSMKPCLPTFTKLESGSLVIDRRGSVMLSFFPAIGERKYDWTKK 168
           S R++A Y+++KGKA LS++P LP+FT+++SG+L IDRRGS+M++F PAIGERKYDW KK
Sbjct: 51  SGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKK 110

Query: 169 QLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVV 228
           Q FALSPTEVG+LIS+G +DS EFFHDP M SS AGQVRKSL++K HADG+GYFISL+V 
Sbjct: 111 QKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFISLSVN 170

Query: 229 NNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGWDRLT 269
           N+   T D+  VP T  EF+VMKTA SFALPHI+GW+RLT
Sbjct: 171 NSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLT 210

[Close]

BLAST of CmUC08G144260 vs. ExPASy Swiss-Prot
Match: Q9LL85 (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Solanum tuberosum OX=4113 GN=WHY1 PE=1 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 3.1e-42
Identity = 79/187 (42.25%), Postives = 118/187 (63.10%), Query Frame = 0


Query: 108 ASDRVYAAYNVYKGKAGLSMKPCLPTFTKLESGSLVIDRRGSVMLSFFPAIGERKYDWTK 167
           ++ +V+  Y++YKGKA L+++P  P F+ L+SG+  + R G VML F PA G R+YDW++
Sbjct: 88  STPKVFVGYSIYKGKAALTVEPRSPEFSPLDSGAFKLSREGMVMLQFAPAAGVRQYDWSR 147

Query: 168 KQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNV 227
           KQ+F+LS TE+G++ISLG +DSCEFFHDP    S  G+VRK L ++   DG+G+F +L+V
Sbjct: 148 KQVFSLSVTEIGSIISLGAKDSCEFFHDPNKGRSDEGRVRKVLKVEPLPDGSGHFFNLSV 207

Query: 228 VNNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGWDRLTQPNPGMGKDFQPNKVDREA 287
            N   N  + + +P T  EF+V+ +A +F +P++LGW                N   R  
Sbjct: 208 QNKLINLDENIYIPVTKAEFAVLVSAFNFVMPYLLGWHTAVNSFKPEDASRSNNANPRSG 267

Query: 288 LSLEWER 295
             LEW R
Sbjct: 268 AELEWNR 274

[Close]

BLAST of CmUC08G144260 vs. ExPASy Swiss-Prot
Match: Q9M9S3 (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=WHY1 PE=1 SV=1)

HSP 1 Score: 169.9 bits (429), Expect = 4.4e-41
Identity = 77/184 (41.85%), Postives = 118/184 (64.13%), Query Frame = 0


Query: 111 RVYAAYNVYKGKAGLSMKPCLPTFTKLESGSLVIDRRGSVMLSFFPAIGERKYDWTKKQL 170
           R Y  +++YKGKA L++ P  P F  L+SG+  + + G ++L F P+ G R+YDW+KKQ+
Sbjct: 80  RFYVGHSIYKGKAALTVDPRAPEFVALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQV 139

Query: 171 FALSPTEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVNN 230
           F+LS TE+GTL+SLGPR+SCEFFHDP    S  G+VRK L ++   DG+G+F +L+V N 
Sbjct: 140 FSLSVTEIGTLVSLGPRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNK 199

Query: 231 SQNTKDFLSVPFTAGEFSVMKTACSFALPHILGW------------DRLTQPNPGMGKDF 283
             N  + + +P T  EF+V+ +A +F LP+++GW             R+   +P  G D+
Sbjct: 200 LVNVDESIYIPITRAEFAVLISAFNFVLPYLIGWHAFANSIKPEETSRVNNASPNYGGDY 259

[Close]

BLAST of CmUC08G144260 vs. ExPASy Swiss-Prot
Match: B2LXS7 (Single-stranded DNA-binding protein WHY1, chloroplastic OS=Zea mays OX=4577 GN=WHY1 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 5.8e-41
Identity = 79/184 (42.93%), Postives = 116/184 (63.04%), Query Frame = 0


Query: 111 RVYAAYNVYKGKAGLSMKPCLPTFTKLESGSLVIDRRGSVMLSFFPAIGERKYDWTKKQL 170
           RV+ +Y++YKGKA LS  P  P F  L+SG+  + + G V+L F PA+  R+YDWT+KQ+
Sbjct: 85  RVFTSYSIYKGKAALSFDPRPPLFVPLDSGAYKVAKEGFVLLQFAPAVATRQYDWTRKQV 144

Query: 171 FALSPTEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVNN 230
           F+LS  E+GTL++LGP DSCEFFHDP    S  G+VRK L I+   DGNG F +L+V N 
Sbjct: 145 FSLSVWEIGTLLTLGPTDSCEFFHDPFKGRSEEGKVRKVLKIEPTPDGNGRFFNLSVQNR 204

Query: 231 SQNTKDFLSVPFTAGEFSVMKTACSFALPHILGWDRLTQPNPGMGKDFQPNKVDREALSL 290
             N  + + +P T GEF+V+ +  ++ +PH++GW   T  +    ++ +P    +     
Sbjct: 205 LINVDESIYIPITKGEFAVIVSTFNYIIPHLMGWS--TFVSSIKPEESRPYSRPQSTSEY 264

Query: 291 EWER 295
           EW R
Sbjct: 265 EWRR 266

[Close]

BLAST of CmUC08G144260 vs. ExPASy TrEMBL
Match: A0A6J1DVW8 (single-stranded DNA-bindig protein WHY2, mitochondrial isoform X2 OS=Momordica charantia OX=3673 GN=LOC111023988 PE=3 SV=1)

HSP 1 Score: 428.3 bits (1100), Expect = 2.5e-116
Identity = 204/232 (87.93%), Postives = 218/232 (93.97%), Query Frame = 0


Query: 64  SQLFEQIVCKKVGHVGHPLGSHPFSSRVGFPDSRQNFTHTVTKNASDRVYAAYNVYKGKA 123
           +QLFEQIVCKK G+VGHP GSH FSSRVG PDSRQNFT TVTKNA DRVYA+YNVYKGKA
Sbjct: 14  NQLFEQIVCKKSGNVGHPFGSHSFSSRVGIPDSRQNFTQTVTKNAGDRVYASYNVYKGKA 73

Query: 124 GLSMKPCLPTFTKLESGSLVIDRRGSVMLSFFPAIGERKYDWTKKQLFALSPTEVGTLIS 183
           G+SM PCLPTFTKL+SG+LVI RRGSVML+FFPAIGERKYDWTKKQLF+LS TE+GTLIS
Sbjct: 74  GVSMMPCLPTFTKLDSGNLVISRRGSVMLTFFPAIGERKYDWTKKQLFSLSATEIGTLIS 133

Query: 184 LGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFT 243
           LGPRDSCEFFHDPGMLSSTAGQVRKSLTIK+HADGNGYFISLNVVNN QNTK+FLSVPFT
Sbjct: 134 LGPRDSCEFFHDPGMLSSTAGQVRKSLTIKSHADGNGYFISLNVVNNMQNTKEFLSVPFT 193

Query: 244 AGEFSVMKTACSFALPHILGWDRLTQP-NPGMGKDFQPNKVDREALSLEWER 295
           AGEFSVMKTACSFALPHILGWD+LT+P + GMGK  QPNKVDREALSLEWER
Sbjct: 194 AGEFSVMKTACSFALPHILGWDQLTRPSHQGMGKVVQPNKVDREALSLEWER 245

[Close]

BLAST of CmUC08G144260 vs. ExPASy TrEMBL
Match: A0A6J1I8L3 (single-stranded DNA-binding protein WHY2, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111471969 PE=3 SV=1)

HSP 1 Score: 415.6 bits (1067), Expect = 1.7e-112
Identity = 198/231 (85.71%), Postives = 213/231 (92.21%), Query Frame = 0


Query: 64  SQLFEQIVCKKVGHVGHPLGSHPFSSRVGFPDSRQNFTHTVTKNASDRVYAAYNVYKGKA 123
           +QLFEQ+VCKK  HV H  GSHPFSS VG P  RQNFTHTV KN +DRVYAAYNVYKGKA
Sbjct: 11  NQLFEQVVCKKAVHVDHAFGSHPFSSGVGIP--RQNFTHTVPKNENDRVYAAYNVYKGKA 70

Query: 124 GLSMKPCLPTFTKLESGSLVIDRRGSVMLSFFPAIGERKYDWTKKQLFALSPTEVGTLIS 183
           G+SM PCLPTFTKL+SGSLV+DRRGSV+L+FFPAIGERKYDWTKKQ F+LSPTEVGTLIS
Sbjct: 71  GVSMFPCLPTFTKLKSGSLVVDRRGSVLLTFFPAIGERKYDWTKKQYFSLSPTEVGTLIS 130

Query: 184 LGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFT 243
           LGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVNN+Q+TK+FLSVPFT
Sbjct: 131 LGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVNNTQSTKEFLSVPFT 190

Query: 244 AGEFSVMKTACSFALPHILGWDRLTQPNPGMGKDFQPNKVDREALSLEWER 295
           AGEFSVMKTACSFALPHILGWDRLT+P+  M K FQPNKV+RE LSLEWER
Sbjct: 191 AGEFSVMKTACSFALPHILGWDRLTKPSLRMEKGFQPNKVNREGLSLEWER 239

[Close]

BLAST of CmUC08G144260 vs. ExPASy TrEMBL
Match: A0A6J1F1U6 (single-stranded DNA-binding protein WHY2, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111438891 PE=3 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.4e-111
Identity = 195/231 (84.42%), Postives = 213/231 (92.21%), Query Frame = 0


Query: 64  SQLFEQIVCKKVGHVGHPLGSHPFSSRVGFPDSRQNFTHTVTKNASDRVYAAYNVYKGKA 123
           +QLFEQ+VCKK GHV H  GSHPFSS VG P   Q FT+TV KN +DRVYAAYNVYKGKA
Sbjct: 11  NQLFEQVVCKKAGHVDHAFGSHPFSSGVGIPG--QKFTNTVPKNENDRVYAAYNVYKGKA 70

Query: 124 GLSMKPCLPTFTKLESGSLVIDRRGSVMLSFFPAIGERKYDWTKKQLFALSPTEVGTLIS 183
           G+SM PCLPTFTKLESGSLVIDRRGS++L+FFPAIGERKYDWTKKQ F+L+PTEVGTLIS
Sbjct: 71  GVSMFPCLPTFTKLESGSLVIDRRGSILLTFFPAIGERKYDWTKKQFFSLNPTEVGTLIS 130

Query: 184 LGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFT 243
           LGPRDSCEFFHDPGMLSSTAGQVRKSL+IKAHADGNGYFISLNVVNN+Q+TK+FLSVPFT
Sbjct: 131 LGPRDSCEFFHDPGMLSSTAGQVRKSLSIKAHADGNGYFISLNVVNNTQSTKEFLSVPFT 190

Query: 244 AGEFSVMKTACSFALPHILGWDRLTQPNPGMGKDFQPNKVDREALSLEWER 295
           AGEFSVMKTACSFALPHILGWDRLT+P+ GM K FQPNKV+RE LSLEW+R
Sbjct: 191 AGEFSVMKTACSFALPHILGWDRLTKPSLGMEKGFQPNKVNREGLSLEWKR 239

[Close]

BLAST of CmUC08G144260 vs. ExPASy TrEMBL
Match: A0A0A0KXS2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G647290 PE=3 SV=1)

HSP 1 Score: 396.4 bits (1017), Expect = 1.1e-106
Identity = 182/231 (78.79%), Postives = 204/231 (88.31%), Query Frame = 0


Query: 64  SQLFEQIVCKKVGHVGHPLGSHPFSSRVGFPDSRQNFTHTVTKNASDRVYAAYNVYKGKA 123
           +QLFEQIV KK G+VGHPLGSHPFSS  G  DS QNFT TVTKNA  RV+A+Y+VYKGKA
Sbjct: 11  NQLFEQIVWKKAGYVGHPLGSHPFSSNAGISDSTQNFTRTVTKNAGGRVFASYHVYKGKA 70

Query: 124 GLSMKPCLPTFTKLESGSLVIDRRGSVMLSFFPAIGERKYDWTKKQLFALSPTEVGTLIS 183
            LSM+PC+PTFTK+ESG+ ++DRRGS+ML+F PA+GERKYDWT+KQLFALS TE+G+LIS
Sbjct: 71  ALSMEPCMPTFTKVESGNFIMDRRGSIMLTFAPAVGERKYDWTRKQLFALSATEIGSLIS 130

Query: 184 LGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFT 243
           LGPRDSCEFFHDPGMLSSTAGQVRKSL IKAH DGNGYF SLNVVN  QNT D+LSVPFT
Sbjct: 131 LGPRDSCEFFHDPGMLSSTAGQVRKSLAIKAHTDGNGYFFSLNVVNKPQNTNDYLSVPFT 190

Query: 244 AGEFSVMKTACSFALPHILGWDRLTQPNPGMGKDFQPNKVDREALSLEWER 295
            GEFSVMKTACSFALP +LGWDR+T PN G+G  FQP K+DREALSLEWER
Sbjct: 191 TGEFSVMKTACSFALPSLLGWDRVTNPNLGVGSVFQPKKIDREALSLEWER 241

[Close]

BLAST of CmUC08G144260 vs. ExPASy TrEMBL
Match: A0A1S3CBJ9 (single-stranded DNA-bindig protein WHY2, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103498625 PE=3 SV=1)

HSP 1 Score: 389.0 bits (998), Expect = 1.7e-104
Identity = 176/231 (76.19%), Postives = 204/231 (88.31%), Query Frame = 0


Query: 64  SQLFEQIVCKKVGHVGHPLGSHPFSSRVGFPDSRQNFTHTVTKNASDRVYAAYNVYKGKA 123
           +QLFEQIVCKK G+VGHPLGSHPFS+R G P+  QNFTHTVTKNA  R + +Y+VYKGKA
Sbjct: 16  NQLFEQIVCKKDGYVGHPLGSHPFSTRAGIPNITQNFTHTVTKNAGGRAFVSYHVYKGKA 75

Query: 124 GLSMKPCLPTFTKLESGSLVIDRRGSVMLSFFPAIGERKYDWTKKQLFALSPTEVGTLIS 183
            +S++PC+PTFTK+ESG+L+IDRRGS+ML+F PA+GERKYDWT+KQLFALS TEVG+LIS
Sbjct: 76  AVSIEPCMPTFTKVESGNLIIDRRGSIMLTFAPAMGERKYDWTRKQLFALSATEVGSLIS 135

Query: 184 LGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFT 243
           +GP+DSCEFFHDPGMLSSTAGQVRK+L IKAH DGNGY ISLNVVN  QNT DFLS+PFT
Sbjct: 136 MGPKDSCEFFHDPGMLSSTAGQVRKNLAIKAHTDGNGYMISLNVVNKPQNTNDFLSLPFT 195

Query: 244 AGEFSVMKTACSFALPHILGWDRLTQPNPGMGKDFQPNKVDREALSLEWER 295
            GEFSV+KTACSFALP +LGWDR+  PN GMG  FQ  ++DREALSLEWER
Sbjct: 196 TGEFSVLKTACSFALPSLLGWDRVFNPNIGMGNGFQSKRIDREALSLEWER 246

[Close]

BLAST of CmUC08G144260 vs. TAIR 10
Match: AT1G71260.1 (WHIRLY 2 )

HSP 1 Score: 235.0 bits (598), Expect = 7.9e-62
Identity = 108/160 (67.50%), Postives = 135/160 (84.38%), Query Frame = 0


Query: 109 SDRVYAAYNVYKGKAGLSMKPCLPTFTKLESGSLVIDRRGSVMLSFFPAIGERKYDWTKK 168
           S R++A Y+++KGKA LS++P LP+FT+++SG+L IDRRGS+M++F PAIGERKYDW KK
Sbjct: 51  SGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKK 110

Query: 169 QLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVV 228
           Q FALSPTEVG+LIS+G +DS EFFHDP M SS AGQVRKSL++K HADG+GYFISL+V 
Sbjct: 111 QKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFISLSVN 170

Query: 229 NNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGWDRLT 269
           N+   T D+  VP T  EF+VMKTA SFALPHI+GW+RLT
Sbjct: 171 NSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLT 210

[Close]

BLAST of CmUC08G144260 vs. TAIR 10
Match: AT2G02740.2 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 171.0 bits (432), Expect = 1.4e-42
Identity = 83/202 (41.09%), Postives = 123/202 (60.89%), Query Frame = 0


Query: 90  RVGFPDSRQNFTHTVTKNASDRVYAAYNVYKGKAGLSMKPCLPTFTKLESGSLVIDRRGS 149
           R G   S QN      + +S R Y  +++YKGKA L+++P  P F  LESG+  + + G 
Sbjct: 68  RFGDSSSSQN-----AEVSSPRFYVGHSIYKGKAALTIEPRAPEFVALESGAFKLTKEGF 127

Query: 150 VMLSFFPAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKS 209
           ++L F PA G R+YDW++KQ+F+LS TE+G L+SLGPR+SCEFFHDP       G+VRK 
Sbjct: 128 LLLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGPRESCEFFHDPFKGKGDEGKVRKV 187

Query: 210 LTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGW----- 269
           L ++   DG+G F +L+V N   N  + + +P T  EF+V+ +A +F LPH++GW     
Sbjct: 188 LKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFAVLISAFNFVLPHLIGWSAFAN 247

Query: 270 -------DRLTQPNPGMGKDFQ 280
                  +RL   +P  G D++
Sbjct: 248 SIKPEDSNRLNNASPKYGGDYE 264

[Close]

BLAST of CmUC08G144260 vs. TAIR 10
Match: AT1G14410.1 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 169.9 bits (429), Expect = 3.1e-42
Identity = 77/184 (41.85%), Postives = 118/184 (64.13%), Query Frame = 0


Query: 111 RVYAAYNVYKGKAGLSMKPCLPTFTKLESGSLVIDRRGSVMLSFFPAIGERKYDWTKKQL 170
           R Y  +++YKGKA L++ P  P F  L+SG+  + + G ++L F P+ G R+YDW+KKQ+
Sbjct: 80  RFYVGHSIYKGKAALTVDPRAPEFVALDSGAFKLSKDGFLLLQFAPSAGVRQYDWSKKQV 139

Query: 171 FALSPTEVGTLISLGPRDSCEFFHDPGMLSSTAGQVRKSLTIKAHADGNGYFISLNVVNN 230
           F+LS TE+GTL+SLGPR+SCEFFHDP    S  G+VRK L ++   DG+G+F +L+V N 
Sbjct: 140 FSLSVTEIGTLVSLGPRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLSVQNK 199

Query: 231 SQNTKDFLSVPFTAGEFSVMKTACSFALPHILGW------------DRLTQPNPGMGKDF 283
             N  + + +P T  EF+V+ +A +F LP+++GW             R+   +P  G D+
Sbjct: 200 LVNVDESIYIPITRAEFAVLISAFNFVLPYLIGWHAFANSIKPEETSRVNNASPNYGGDY 259

[Close]

BLAST of CmUC08G144260 vs. TAIR 10
Match: AT2G02740.1 (ssDNA-binding transcriptional regulator )

HSP 1 Score: 168.7 bits (426), Expect = 7.0e-42
Identity = 84/203 (41.38%), Postives = 124/203 (61.08%), Query Frame = 0


Query: 90  RVGFPDSRQNFTHTVTKNASDRVYAAYNVYKGKAGLSMKPCLPTFTKLESGSLVIDRRGS 149
           R G   S QN      + +S R Y  +++YKGKA L+++P  P F  LESG+  + + G 
Sbjct: 68  RFGDSSSSQN-----AEVSSPRFYVGHSIYKGKAALTIEPRAPEFVALESGAFKLTKEGF 127

Query: 150 VMLSFFPAIGERKYDWTKKQLFALSPTEVGTLISLGPRDSCEFFHDPGM-LSSTAGQVRK 209
           ++L F PA G R+YDW++KQ+F+LS TE+G L+SLGPR+SCEFFHDP     S  G+VRK
Sbjct: 128 LLLQFAPAAGVRQYDWSRKQVFSLSVTEIGNLVSLGPRESCEFFHDPFKGKGSDEGKVRK 187

Query: 210 SLTIKAHADGNGYFISLNVVNNSQNTKDFLSVPFTAGEFSVMKTACSFALPHILGW---- 269
            L ++   DG+G F +L+V N   N  + + +P T  EF+V+ +A +F LPH++GW    
Sbjct: 188 VLKVEPLPDGSGRFFNLSVQNKLLNVDESVYIPITKAEFAVLISAFNFVLPHLIGWSAFA 247

Query: 270 --------DRLTQPNPGMGKDFQ 280
                   +RL   +P  G D++
Sbjct: 248 NSIKPEDSNRLNNASPKYGGDYE 265

The following BLAST results are available for this feature:

BLAST of CmUC08G144260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891064.1	5.4e-121	90.91	single-stranded DNA-binding protein WHY2, mitochondrial [Benincasa hispida]	[more]
XP_022157229.1	5.3e-116	87.93	single-stranded DNA-bindig protein WHY2, mitochondrial isoform X2 [Momordica cha...	[more]
XP_022973421.1	3.5e-112	85.71	single-stranded DNA-binding protein WHY2, mitochondrial [Cucurbita maxima]	[more]
KAG6607541.1	6.0e-112	84.85	Single-stranded DNA-binding protein WHY2, mitochondrial, partial [Cucurbita argy...	[more]
XP_023523845.1	1.7e-111	84.42	single-stranded DNA-binding protein WHY2, mitochondrial [Cucurbita pepo subsp. p...	[more]

BLAST of CmUC08G144260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
D9J034	9.8e-65	57.62	Single-stranded DNA-binding protein WHY2, mitochondrial OS=Solanum tuberosum OX=...	[more]
Q8VYF7	1.1e-60	67.50	Single-stranded DNA-binding protein WHY2, mitochondrial OS=Arabidopsis thaliana ...	[more]
Q9LL85	3.1e-42	42.25	Single-stranded DNA-binding protein WHY1, chloroplastic OS=Solanum tuberosum OX=...	[more]
Q9M9S3	4.4e-41	41.85	Single-stranded DNA-binding protein WHY1, chloroplastic OS=Arabidopsis thaliana ...	[more]
B2LXS7	5.8e-41	42.93	Single-stranded DNA-binding protein WHY1, chloroplastic OS=Zea mays OX=4577 GN=W...	[more]

BLAST of CmUC08G144260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DVW8	2.5e-116	87.93	single-stranded DNA-bindig protein WHY2, mitochondrial isoform X2 OS=Momordica c...	[more]
A0A6J1I8L3	1.7e-112	85.71	single-stranded DNA-binding protein WHY2, mitochondrial OS=Cucurbita maxima OX=3...	[more]
A0A6J1F1U6	1.4e-111	84.42	single-stranded DNA-binding protein WHY2, mitochondrial OS=Cucurbita moschata OX...	[more]
A0A0A0KXS2	1.1e-106	78.79	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G647290 PE=3 SV=1	[more]
A0A1S3CBJ9	1.7e-104	76.19	single-stranded DNA-bindig protein WHY2, mitochondrial OS=Cucumis melo OX=3656 G...	[more]

BLAST of CmUC08G144260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71260.1	7.9e-62	67.50	WHIRLY 2	[more]
AT2G02740.2	1.4e-42	41.09	ssDNA-binding transcriptional regulator	[more]
AT1G14410.1	3.1e-42	41.85	ssDNA-binding transcriptional regulator	[more]
AT2G02740.1	7.0e-42	41.38	ssDNA-binding transcriptional regulator	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013742	Whirly transcription factor	PFAM	PF08536	Whirly	coord: 118..252 e-value: 5.4E-54 score: 181.7
IPR013742	Whirly transcription factor	PANTHER	PTHR31745	SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL	coord: 64..294
IPR009044	ssDNA-binding transcriptional regulator	GENE3D	2.30.31.10	Transcriptional Coactivator Pc4; Chain A	coord: 104..273 e-value: 4.0E-69 score: 233.7
IPR009044	ssDNA-binding transcriptional regulator	SUPERFAMILY	54447	ssDNA-binding transcriptional regulator domain	coord: 109..294
None	No IPR available	PANTHER	PTHR31745:SF1	SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL	coord: 64..294

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC08G144260.1	CmUC08G144260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006952	defense response
biological_process	GO:0006281	DNA repair
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:1990391	DNA repair complex
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003697	single-stranded DNA binding
molecular_function	GO:0003677	DNA binding