CmUC08G144150 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC08G144150
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	30-kDa cleavage and polyadenylation specificity factor 30-like
Location	CmU531Chr08: 3046624 .. 3055781 (-)
RNA-Seq Expression	CmUC08G144150
Synteny	CmUC08G144150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCTTCACTCTCTGATTTAACTCCGTTCAACTTCATTGCCTACTCTCCGGTCTCTGCTTCTTCGTTTCGGGCTATGATCTGCTTCACAACCCTCATTCCGTAACCATTTCCCTTTCCTAATGGAGGATTCGGAGGGTGTTCTCAGCTTCGACTTTGAGGGCGGCCTCGATGCCGGCCCCACGAACCCCGCCGCCACCTCCTCCTTGCCCCTCATCCACTCCGACTCTTCTGCCCCGCCCGCTGCCTCCGCCGTCTCCAACTCCCTTTCTGGCGCCCTCGGTCCTGCTGTTTCCGCTGAACCTCCTGGCGCCCCAACCGGCAACGTCGGCAACCGGAGGAGCTTCCGGCAAACGGTTTGCCGCCATTGGCTCCGTAGCCTCTGCATGAAGGGCGATGCCTGTGGCTTCCTTCACCAGTATGATAAGTCACGGATGCCCATTTGCCGGTTCTTTCGTCTCTATGGCGAGTGCCGCGAGCAGGATTGCGTCTACAAACATACCAATGAAGATATCAAGGAGTGTAATATGTACGTTTTGGGAATTGGAACTTGCAATTCAGTTTTAGCTTTTAATTTGTTAGGTGTTCGTCTGATTTACGTTTTTGGTCGTTTAACTTCTTTGTACTCTTCTTTTAATAGGAGGTGATCAATGTCTGCTTTCATTGTTTATGCCCTTCTTCTTTATCCCTAGATGTTGAATTTATTAGTAGCATATGCAGTTCACCGATTGCAGACTGAATTTTATTTCTTTTGAACTCTTTTTCATTTTTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAATATATGAGGATGTAGTTTTCTCTAATATATGAAATTGTACAAACAAAATCTTACTCTCCCTACAGGAGTATACAAAAGAGCATCGAAATTGCTAAGGAAGAACAGTTACATAAGTAGTTAGACTATTAAGCACCATGAAGAGACACTTATCCAAATTGTAAGCCTTCCTCCGATCTCATTCCTATCTTTGTCATTCTTGAATTCCTTGTTAACCATAAATCCCATGAGATGGCCCTAGCTGCGTTAATCCAAAAAGTTTTAAGCCTTTCTTTAAAGTTTTGCTACCCAACAACTGTATCATTATTTTTCTAGTGGAACTATCGAAGGACCTAGGAAATTGTTACTTATCCAAAAAAAAAGAAAAAAGAAATGCCTAAGAGAGATAAAAAATAATGAAATAGAGTATTCTACGTCTCTGCTATAGGTGCAAAATAATAGTAGGTAATCTTGGGCCTTGTTTAAATGCATTCTTTCTTTCCTTGAGTTTTCCCACATGATTCCCAAAAAGATATTGAAGTTTTAAGTTTAAGCTATGTGTATGACTGTAATATGAGCATGCCTATTACATGTTAAGTTGATGGTATTTTAGACATATTTATGGCGCTAGATCTTGAGGAATCCTCATCCAAGCTTTTACAAAATGAATCCCTTGTTTTACTTAGACGAAATTTATTGCAATAACATAATCTTTTAAATTAATTTCTGTAGTACATCTTTGTAGACCGATTTTTGATCTTTCAGAAACAATGGATGTTATACATCTGAAGGCTGAACACTGTAACTGCAGGTACAAGTTTGGTTTCTGTCCAAATGGTCCTGATTGTCGGTATAGGCATGCAAAGCTGCCTGGACCTCCACCTCCAGTGGAAGAAATCCTTCAGAAAATACAGCATTTAGGTTCATACAATTATGGTCCCTCAAACAAATTCTTTTCACAACGTGGAGTTGGCTTATCCCAACAGAATGAAAAAGCTCAGTTTCCTCAAGGTCCGGCCATCGTTGCTCAAGGAGTGACAGGAAAACCTTCTGCAGCAGAATCTGCTAATGTTCAACAACAGCAAGGTCAACAGTCTGCACAACAAACCAGCCAGACTCCGGTACAAAGTCTTTCGAATGGCCAGCCCAATCAATTAAACAAAACTGGAACGTCGTTGCCTCAAGGAATATCTAGGTGTGTCTGAAGAGACCTGAAGTCTTTTTGCATGTTAGCTTTAACTAAGTTTTTGTATCATATGGACAGTGTTGCAGAGATATGTTATTATTTAACCTTCAGTAGTCAAATCATATTTGTGCTTTCGTTTGGTTGCTTTAAGCCCCAGTAGTCATTAGTCAACAATGTTTTTCTTCATATCAATTTGTAGTCCATGGACCACAAGAATCTTTAGGTAGAAAGAGATTCTAACTCAGTACCCTTTGAGATTTTAAGAAGAGTACATGTAAATATTTTTATTATCAGAAAATTTGTATGAAAGAATACAGAAGGGCATGAATGGTATCATCTTAAGGTATTAGCGATTTTACATGTTCTGTATCAAGCTATTAAATTCCATGTCAAAGCTTCATTACCATATGTTCATGTTCCCTTTCTGTTAGTATCTCATGTCAATTTCCAAGTTCTAGAAACTATTTTTCCCCTTACGTTTATGGCTATGTTATAGATTGGCTAGAATCTGTTGGCTCAAAGCTCATACTCTGTTATGTTAGGGTCTCACTAAATCTGTGGACTGAGACTTCTTACAGACCTTTTTGATTTAGTTTGCTTTAATACTTGAATTAATGTGGTCTATCCAGCTTCTGTAATTATACTCGCTTTGTGATTTATGTTCAGTGGATTTTTCTGTAAAACTTAATCAGCAAGGGTGTACCCTTCTTTGGTTCTGTAACCTTTTCCATTCATCTCCTGATAAAGACAAGTGGTTCCCCATTTTTAATATAATTTTGTAAACAGAATAAAAAATCTGACTTTCACACAAACCTTTTAAATACTCTGAATGTCGTAATTTATTTTTGAAAGATTAGGTACTTTATTGTTAAAAGTTGCAACCGTGAGAATTTGGAATTATCTGTACAACAAGGGGTATGGGCAACTCAAAGAAGCAATGAAGCTAAACTTAATGAAGCTTTTGATTCTGCTGATAATGTTATTTTGATTTTCTCGGTCAATCGGACTCGGCATTTTCAGGTGCTAATCATTCACTATTGTGTATGTGTATGAATTATGACACTACTTGGTCATTGAGGACCGAAGTATGTTTGTTTGAGATAATCATACTGATTTATTATTGGCTGCATAGGGTTGTGCAAAGATGATGTCCAGGATTGGTGGATCTGTCAGTGGGGGCAATTGGAAGTATGCACATGGAACTGCACATTATGGGCAAAACTTTTCACTCAAATGGCTGAAGGTTGATATTTCATTTCTTAGATCTATGGTTTTATGCAGAAATTTATCAAAATTACATATCTCATCATGCTGTTGCCTGTTAGGGTATAGTGTTTAGGATGATTTTGATGCCATCAATTTGAGTCCTGCATGGTGTGATGAATAATTTGACTTTGTTACTTGCAGTTATGTGAATTATCCTTCCAGAAAACGCGCCATTTGAGGAATCCATATAATGAAAACTTACCAGTAAAGGTTAGTATCTGAGTATCTCAAGCTTGATGAAGAAAAATTTCTATTTATATTTACATCTGCAGATGTCCTTGGCATGCTTCTTCTTTTACTTGTGTTGTGAACTCTTGAACATATTTCCCACTTCTTTTATCTTTTATGTTTATGATCCTTGTGTTGTTTGCACTTTCTGATGATAATACATATGACTGGTTTTGTTGCAGTCTAATTATCTGAAAGCATACTTAAGAACTTGCAATCTTGTGGATGAAAGTTTATCCTTTTTTCCTCACCCTTTTGGGGTGGGTGTGGGTGTGGGGTTATCTGGGAGATTTCTGTAGGATTTAGTTTCTAGAAATTACATTCTGCCCCATGTGGACTGTGCAATCTATATTTTACATTCCAGGAATCATCTGGCAGAGAGTGCTAACATGGTTGATACAATCATGAGGATTGCAATCCTGATTGACCTCACACTTTAACTTGCAGCGTACCTACCCCCATCATCCTTGTTTGCAAGGCTTTCTTTTGTTTTTAACTTACTGTATTGTTCCTTGTTTCACCGTGACCCTTACTAGTTACTTCTTTGGCCTGGTAAGTTTGTTGTTGTAATGCTGGTTTGTAGCCTTTAAATAGTTTGTCCTATGTTGTTGAAAGGACATTTTAGAACTCAAGGACACAGTTGTACAACCTATAGAACAGATCCCGTTCAAGTAAGGTCGTTCTTGAAAGGACATTTTAGTAAAGAATACTTCAAGATTTCTCCAAGAATAGTGTTACACTATCCAGATTGCTAATGTGGCCGGGTGAAGTTTTGGGATGAATTTTGAGTCGTTTACTGACTCTCATATCCTCCTCTGGTTAGGGCAGTGACCTTCATTTTGTAAGTTTCATACATCATTAAAATTTGTTTCTCATAAAATAACAATAATAACTAGACTTCCATACCTCCCTTTCTTTAGTACGGGACAAGGGCTAGTTGTTTTTGCACAATGCTGGATCCTTCAAGTAGTTGGATGTTTGAATTTTGAAAAGAAAATGATGATGAATTGAAAGAATGGAAGGAGCTTATATGTTCATTTGGATGGTTTTGTTTCCCTTTGCAAATGTATAGGAAAAAAGATTATGTAGAGGAGATTGTCTTTTACTATGGAATTGTGTAGAGTTAGGCTTTATGAAAATTTACCATCTGTAAGCTAATTTATTTTCATGGCCAGTCTCCCTAGGTATAAGTGGCAGTACAGAAAAAAATGGCTTGTGCTCTATAGGAATTTTTTCAAAGTTCTCAACCACTTGTCTTGAATTCCTGATGGCTTCTCCTAGTTTGGTACATGACCTGTTGATTGTTCTACGCAGGTTCAAAAGGAAAGCAATTGTCTAGATGCTAATGTTTTTTAAGTGCAACACGTACTCTATTCTAATTTCTAGGGTAGGGATGGCAAAAATTCCCTGCCAGGATTAGTTCTAAGGAGGTTAGTGTTAGGCCACCGATTGTATTGAAATATAGTAGATTCCTATTAGAATGGTATTAGAGCCGGTTTTTAACTGGGTGCGGCCGAGTGAAGTACCGTCAAAGTAGCTAATGGGACGTCGGCTTTTCAGGGATGGGGTATTGTTAGGAACCAAGGTATTATGGGCTACATTTGTCACACATTGGTTAGAATGTGATGACAATGTGGTACTTAAGTGGCTTGGCTCCCCACCTCAATAGCTAGCTTTTGGGGTGTGGTTCTCCAAGGTGCTTAAGTACCTAACAATGGTTTTAGAGCTGATCAGGGATTCTTAATCGAATGTCAAGCTATGGAAGGAGGAGTTTCCTTAGTTGAGTGGTATGAAGTGGACGAAGTGTATACAATTTTTGAATCTATACCTGCTGTGATAGAGAAATATGACAATGTGGTTGATTGGCCGTTGGAATTACCGCCAAGGAGGAGCATTAAACATCATATACATGAAAAGAAGGGAAAGAATCCTATAAATGTTAAACTGTATCGATATGCTTATCAACAGAAGGAGGAGATGGAGAAGCTGGTAGATGAGATATTAGCTTCCAACCAGTCTTTATTCGAGTCCAATTTTGTTGGTAAGGAAGAAGGATGGTGGGTGGAGATTTTGTGTTGATTATAGGGCTTTGAATAATGTTACAATTCCTGACAAGTTTCCGATTCCAGTCACTGAAGAGTTGTTTGATGAGCTAAATGGAGCTTCCTTACTTTTGAAGATCAATCTGAAGTCTGGGTATCATTAGACATGAATGCATCTTGGAGATATTGAGAAAACAATGTTTAGGACTCATGAGGGACATAAAGAATTTTTGGTGATGCCCTTCGGTTTGACGAAAGCTCCATCTACTTTTTAGGCGTTTATGAATACAATCTTCAAGCCCTACTTGCGGAGGTTTGTGCTGGTTTTTCTTTTTCTTTTCTTTTTTTTAAATGATATTCTAGTCTATAGCAGAAATGTGGAAGAACATAGGAAGCATTTGGAGTTGGTATTGTTTGTCCTTCGTGAGAATGAGTTGTATGCCAATCGAAATAAATGTCAGTTTGCTAGAGAAAGGGTGGGATATTTGGGGCATTTAGGGCCTGTTTGGTAGAAAATCTGAAAATAGAAATTTGAAACCAAGGAATTAAATGAAAACAGAGTTGTATTTCATGTTTTCAGATATGTGTTTGATATTAGAATTCAAAAATTAGATGGTAATTTATACAATTGTAAGCTAGTTGTAGTTACTAAATATCCGTTGACAATAAATTTTATTAATTTATTTATGAACATGGTTTTATGTTAAAAAAGTTGTATAATTATTGTTTTGTAATATTATATAATTTATGGATTGAAATTTTTGTCCCTATGGTTTGGAAGAAGTTAAAATTTAGGTCTTAGGTTTTATAATTAGAATTAACTCCTATGGTTTGTTAAAAGCTTCATAAACAATCCCTATGGCAAGGATTACTTAAGAGGATTTAACAAACCATAGGGGCAATATATGAACTTGTATCAAACCATAGGAACTAAATTCTAAATTTTAAAACCAAATGCACTAACTTGTAAATTTATCAAATCCATAGGGACCAAATCTGGAATTTAACCTATTATAATAATTACATAATACATATTTTAATTAAAAAAGATTGAATTGAGTTTATAACGTCATGTTTTTATTTTTATTTGATATAATTCTGCATTTTAAATTTTAAAATTCAAATTCTTGATACAATGAAAATATAAAAATGTTGTTTTCAAAATTTACACGGTTTGAATTACAGAATCCGGAAATAGTTTTCAAAAGCAGAATTTGGTTGTTTGCCAAACACATATTTACTAAATTGAAGGGGAGAGTAATGTTAGCGCACCGATTGTATTGAAATATAGTAGAAGGGGTAACAAGGGAAGGGCATTGTGCGTGGTAAAAGACCAAAGAAATAATTTTCCACCCTGCTTCGACTTTGGAAATTTTTAAATATTATTTTATTATCTTCTTAGTTCTTTAGACCTTCTTATACATGGTGAGAAATGAAATATATAATTGTTGATTATAAGTTTGTAGAAAAAGGTGGATATAATGAATGAAAATAGGAACATATTTAGTCAGAAGTACGAAGAAGACCAGAAATTCTTATTTCCCCTTTCCAAGATGTGGCAAAAAGGCTGCAATAACAATGTGTCAAAAAGGTGATCAAGGCAATTACCTGAGTGGAGGTGCTTCGTAAACTACCTTGGCTTGCTGTCACTACAGGGGATCAATTGGGCGTATTTTGAAGGCACTGTTAAATGCTAGGACGACTTTTGTGGAAAGACTTGGTGCAGGTTGATCATTCCATGACTGAAAATTTGTGAATTCACTTCGATATTTTGGAGGATGGGGAAATACAGCAAAAAGCCATGATCTTTTATTAGATAGTGACATTTGATAGTAATTTGGTTGAGAGGAAACGAGAAATTTGTGAAGTCACGCTGATTGTGTATCGCATGGGATGGCTTTGATAGCTTTACTATGCTTCACCTTTAAAGGATTTGAAAGCCGTCCTGTTTTTCTTGTAAAATCGTTCAATTGGCACCCTGTTTCTACTCATTTGATTTGAAACTGCTCGTTGTCTTGGTTTGTTTCCTGTCGACCATCCACATGTAGTCATGTACGTAGAGAAAGAATGCTTGAAGAGATGATATTCTTTCCTTCATATCTTGTTCTGCAATCAGTATTAGCATTGGATACTAATTGAGCCATCATTTTTTTCGTAATCTTACAACTGCAGATCAGTAGAGATTGCCAAGAGTTAGAGCCCTCTATTGGTGAGCAGCTAGCGTCTTTGCTTTATCTTGAGCCAGATGGTGAACTCATGGTATGCTTGCTTTGTTCCAATCAGAAAAGTTTGAAATAAACTCCCAGTGCAATAGATTACATATGCCACCAGGCGAGGAAGAAAATAAAATTTGAGGAAATGGATTTTGGCAGTTCCAGGATTCATTATTGTGTAAGGATTTCTTATGTGTGTTTTCTTATTTTTTGATCAGGCCGTCTCACTAGCAGCGGAATCAAAACGAGAAGAGGAGAAAGCAAAGGGAGTTAATCCTGATATTGGAAGTGAGAACCCAGATATTGTCCCGTTTGAGGATAATGAAGAAGAGGAAGAGGAAGAAAGTGAAGAGGAGGAGGAAGAGAGCTTTGGCCAGTCCGTTGGTCTACCACCTCAGGGGAGAGGACGGGGCAGGGGAATCATGTGGCCCCCACATATGCCTATGGGACGTGGTGCTGCCAGACCCTTCCATGGAATGCAGGGTTTTCCACCTGGGATGATGGGCACGGATGGGCTTTCTTATGGTCCTGTTACACCTGACGGATTTCCCATGCCTGACATTTTTGGTATGGCCCCTCGTGGTTTTGGTCCGTACGGTCCTAGGTTTTCTGGTGATTTCATGGGTCCTCCAACAGCTATGATGTTTCGCGGACGACCTTCTCAACCTGGGGCCGTGTTTCCCCCTGGTGGGTTTGGGATGATGATAGGTCAAGGACGTGGTCCATTCATGGGTGGGATGGGGGTTACCGGTACTAACCCTGCTCGACCTGGTCGTCCTGTGGGTGTGCCTCCATTGTATCCACCTCCTGCAGTACCCTCACCACAGAACATGAATCGAGCTATAAAGAGGGATCAAAGGGGACCGGCCAGTGATCGGAATGATAGATATATTGTGGGTCTCGACCAAAACAAAGGCCCAGAAATGCCAAATAGTGGACGTGATGACGAAATGCAATATAAGCAGGGATCAAAAGCCTATTCTGATGAACAATATGGAATCGGAGCCACCTTTAGGAATGAAGAAAGTGAAAGTGAGGACGAGGCACCTCGGCGATCAAGGCATGGAGAGGGTAAGAAGAAGCGGAGAGGAGACTCAGAAGGAGATGCGACTGCAATCTCTAATCAGTGATTACTTGTAGTTAATTATATCTGACCAAATAGCCTCTGTTTTGCCTCTGATCAAGGATGTCTTCCTACTTGGGCAATACATCGTTGAACTTAGTGTTGTAAGTTCTAAAATTGGAGTACTTAAGCTTCATCTCATTTTTTTTCTCTATTTCCTTTTTAGGCGACTTCTTGCAGCGTAAGTTATACATTTCTAAGTAGTCATAATTTATACATTATTTTACAAATTTGTAAATGAACTTTCATATGAAGGGAAGAATCTCATAACGTCGATATTCAATGATGTGGAGCTGTTATATCTTCCCTCCATTGTT

mRNA sequence

CTCCTTCACTCTCTGATTTAACTCCGTTCAACTTCATTGCCTACTCTCCGGTCTCTGCTTCTTCGTTTCGGGCTATGATCTGCTTCACAACCCTCATTCCGTAACCATTTCCCTTTCCTAATGGAGGATTCGGAGGGTGTTCTCAGCTTCGACTTTGAGGGCGGCCTCGATGCCGGCCCCACGAACCCCGCCGCCACCTCCTCCTTGCCCCTCATCCACTCCGACTCTTCTGCCCCGCCCGCTGCCTCCGCCGTCTCCAACTCCCTTTCTGGCGCCCTCGGTCCTGCTGTTTCCGCTGAACCTCCTGGCGCCCCAACCGGCAACGTCGGCAACCGGAGGAGCTTCCGGCAAACGGTTTGCCGCCATTGGCTCCGTAGCCTCTGCATGAAGGGCGATGCCTGTGGCTTCCTTCACCAGTATGATAAGTCACGGATGCCCATTTGCCGGTTCTTTCGTCTCTATGGCGAGTGCCGCGAGCAGGATTGCGTCTACAAACATACCAATGAAGATATCAAGGAGTGTAATATGTACAAGTTTGGTTTCTGTCCAAATGGTCCTGATTGTCGGTATAGGCATGCAAAGCTGCCTGGACCTCCACCTCCAGTGGAAGAAATCCTTCAGAAAATACAGCATTTAGGTTCATACAATTATGGTCCCTCAAACAAATTCTTTTCACAACGTGGAGTTGGCTTATCCCAACAGAATGAAAAAGCTCAGTTTCCTCAAGGTCCGGCCATCGTTGCTCAAGGAGTGACAGGAAAACCTTCTGCAGCAGAATCTGCTAATGTTCAACAACAGCAAGGTCAACAGTCTGCACAACAAACCAGCCAGACTCCGGTACAAAGTCTTTCGAATGGCCAGCCCAATCAATTAAACAAAACTGGAACGTCGTTGCCTCAAGGAATATCTAGGTACTTTATTGTTAAAAGTTGCAACCGTGAGAATTTGGAATTATCTGTACAACAAGGGGTATGGGCAACTCAAAGAAGCAATGAAGCTAAACTTAATGAAGCTTTTGATTCTGCTGATAATGTTATTTTGATTTTCTCGGTCAATCGGACTCGGCATTTTCAGGGTTGTGCAAAGATGATGTCCAGGATTGGTGGATCTGTCAGTGGGGGCAATTGGAAGTATGCACATGGAACTGCACATTATGGGCAAAACTTTTCACTCAAATGGCTGAAGTTATGTGAATTATCCTTCCAGAAAACGCGCCATTTGAGGAATCCATATAATGAAAACTTACCAGTAAAGCGTACCTACCCCCATCATCCTTGTTTGCAAGGCTTTCTTTTGTTTTTAACTTACTGTATTGTTCCTTGTTTCACCGTGACCCTTACTAGTTACTTCTTTGGCCTGATCAGTAGAGATTGCCAAGAGTTAGAGCCCTCTATTGGTGAGCAGCTAGCGTCTTTGCTTTATCTTGAGCCAGATGGTGAACTCATGGCCGTCTCACTAGCAGCGGAATCAAAACGAGAAGAGGAGAAAGCAAAGGGAGTTAATCCTGATATTGGAAGTGAGAACCCAGATATTGTCCCGTTTGAGGATAATGAAGAAGAGGAAGAGGAAGAAAGTGAAGAGGAGGAGGAAGAGAGCTTTGGCCAGTCCGTTGGTCTACCACCTCAGGGGAGAGGACGGGGCAGGGGAATCATGTGGCCCCCACATATGCCTATGGGACGTGGTGCTGCCAGACCCTTCCATGGAATGCAGGGTTTTCCACCTGGGATGATGGGCACGGATGGGCTTTCTTATGGTCCTGTTACACCTGACGGATTTCCCATGCCTGACATTTTTGGTATGGCCCCTCGTGGTTTTGGTCCGTACGGTCCTAGGTTTTCTGGTGATTTCATGGGTCCTCCAACAGCTATGATGTTTCGCGGACGACCTTCTCAACCTGGGGCCGTGTTTCCCCCTGGTGGGTTTGGGATGATGATAGGTCAAGGACGTGGTCCATTCATGGGTGGGATGGGGGTTACCGGTACTAACCCTGCTCGACCTGGTCGTCCTGTGGGTGTGCCTCCATTGTATCCACCTCCTGCAGTACCCTCACCACAGAACATGAATCGAGCTATAAAGAGGGATCAAAGGGGACCGGCCAGTGATCGGAATGATAGATATATTGTGGGTCTCGACCAAAACAAAGGCCCAGAAATGCCAAATAGTGGACGTGATGACGAAATGCAATATAAGCAGGGATCAAAAGCCTATTCTGATGAACAATATGGAATCGGAGCCACCTTTAGGAATGAAGAAAGTGAAAGTGAGGACGAGGCACCTCGGCGATCAAGGCATGGAGAGGGTAAGAAGAAGCGGAGAGGAGACTCAGAAGGAGATGCGACTGCAATCTCTAATCAGTGATTACTTGTAGTTAATTATATCTGACCAAATAGCCTCTGTTTTGCCTCTGATCAAGGATGTCTTCCTACTTGGGCAATACATCGTTGAACTTAGTGTTGTAAGTTCTAAAATTGGAGTACTTAAGCTTCATCTCATTTTTTTTCTCTATTTCCTTTTTAGGCGACTTCTTGCAGCGTAAGTTATACATTTCTAAGTAGTCATAATTTATACATTATTTTACAAATTTGTAAATGAACTTTCATATGAAGGGAAGAATCTCATAACGTCGATATTCAATGATGTGGAGCTGTTATATCTTCCCTCCATTGTT

Coding sequence (CDS)

ATGGAGGATTCGGAGGGTGTTCTCAGCTTCGACTTTGAGGGCGGCCTCGATGCCGGCCCCACGAACCCCGCCGCCACCTCCTCCTTGCCCCTCATCCACTCCGACTCTTCTGCCCCGCCCGCTGCCTCCGCCGTCTCCAACTCCCTTTCTGGCGCCCTCGGTCCTGCTGTTTCCGCTGAACCTCCTGGCGCCCCAACCGGCAACGTCGGCAACCGGAGGAGCTTCCGGCAAACGGTTTGCCGCCATTGGCTCCGTAGCCTCTGCATGAAGGGCGATGCCTGTGGCTTCCTTCACCAGTATGATAAGTCACGGATGCCCATTTGCCGGTTCTTTCGTCTCTATGGCGAGTGCCGCGAGCAGGATTGCGTCTACAAACATACCAATGAAGATATCAAGGAGTGTAATATGTACAAGTTTGGTTTCTGTCCAAATGGTCCTGATTGTCGGTATAGGCATGCAAAGCTGCCTGGACCTCCACCTCCAGTGGAAGAAATCCTTCAGAAAATACAGCATTTAGGTTCATACAATTATGGTCCCTCAAACAAATTCTTTTCACAACGTGGAGTTGGCTTATCCCAACAGAATGAAAAAGCTCAGTTTCCTCAAGGTCCGGCCATCGTTGCTCAAGGAGTGACAGGAAAACCTTCTGCAGCAGAATCTGCTAATGTTCAACAACAGCAAGGTCAACAGTCTGCACAACAAACCAGCCAGACTCCGGTACAAAGTCTTTCGAATGGCCAGCCCAATCAATTAAACAAAACTGGAACGTCGTTGCCTCAAGGAATATCTAGGTACTTTATTGTTAAAAGTTGCAACCGTGAGAATTTGGAATTATCTGTACAACAAGGGGTATGGGCAACTCAAAGAAGCAATGAAGCTAAACTTAATGAAGCTTTTGATTCTGCTGATAATGTTATTTTGATTTTCTCGGTCAATCGGACTCGGCATTTTCAGGGTTGTGCAAAGATGATGTCCAGGATTGGTGGATCTGTCAGTGGGGGCAATTGGAAGTATGCACATGGAACTGCACATTATGGGCAAAACTTTTCACTCAAATGGCTGAAGTTATGTGAATTATCCTTCCAGAAAACGCGCCATTTGAGGAATCCATATAATGAAAACTTACCAGTAAAGCGTACCTACCCCCATCATCCTTGTTTGCAAGGCTTTCTTTTGTTTTTAACTTACTGTATTGTTCCTTGTTTCACCGTGACCCTTACTAGTTACTTCTTTGGCCTGATCAGTAGAGATTGCCAAGAGTTAGAGCCCTCTATTGGTGAGCAGCTAGCGTCTTTGCTTTATCTTGAGCCAGATGGTGAACTCATGGCCGTCTCACTAGCAGCGGAATCAAAACGAGAAGAGGAGAAAGCAAAGGGAGTTAATCCTGATATTGGAAGTGAGAACCCAGATATTGTCCCGTTTGAGGATAATGAAGAAGAGGAAGAGGAAGAAAGTGAAGAGGAGGAGGAAGAGAGCTTTGGCCAGTCCGTTGGTCTACCACCTCAGGGGAGAGGACGGGGCAGGGGAATCATGTGGCCCCCACATATGCCTATGGGACGTGGTGCTGCCAGACCCTTCCATGGAATGCAGGGTTTTCCACCTGGGATGATGGGCACGGATGGGCTTTCTTATGGTCCTGTTACACCTGACGGATTTCCCATGCCTGACATTTTTGGTATGGCCCCTCGTGGTTTTGGTCCGTACGGTCCTAGGTTTTCTGGTGATTTCATGGGTCCTCCAACAGCTATGATGTTTCGCGGACGACCTTCTCAACCTGGGGCCGTGTTTCCCCCTGGTGGGTTTGGGATGATGATAGGTCAAGGACGTGGTCCATTCATGGGTGGGATGGGGGTTACCGGTACTAACCCTGCTCGACCTGGTCGTCCTGTGGGTGTGCCTCCATTGTATCCACCTCCTGCAGTACCCTCACCACAGAACATGAATCGAGCTATAAAGAGGGATCAAAGGGGACCGGCCAGTGATCGGAATGATAGATATATTGTGGGTCTCGACCAAAACAAAGGCCCAGAAATGCCAAATAGTGGACGTGATGACGAAATGCAATATAAGCAGGGATCAAAAGCCTATTCTGATGAACAATATGGAATCGGAGCCACCTTTAGGAATGAAGAAAGTGAAAGTGAGGACGAGGCACCTCGGCGATCAAGGCATGGAGAGGGTAAGAAGAAGCGGAGAGGAGACTCAGAAGGAGATGCGACTGCAATCTCTAATCAGTGA

Protein sequence

MEDSEGVLSFDFEGGLDAGPTNPAATSSLPLIHSDSSAPPAASAVSNSLSGALGPAVSAEPPGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSYNYGPSNKFFSQRGVGLSQQNEKAQFPQGPAIVAQGVTGKPSAAESANVQQQQGQQSAQQTSQTPVQSLSNGQPNQLNKTGTSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELSFQKTRHLRNPYNENLPVKRTYPHHPCLQGFLLFLTYCIVPCFTVTLTSYFFGLISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGSENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPPQGRGRGRGIMWPPHMPMGRGAARPFHGMQGFPPGMMGTDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPTAMMFRGRPSQPGAVFPPGGFGMMIGQGRGPFMGGMGVTGTNPARPGRPVGVPPLYPPPAVPSPQNMNRAIKRDQRGPASDRNDRYIVGLDQNKGPEMPNSGRDDEMQYKQGSKAYSDEQYGIGATFRNEESESEDEAPRRSRHGEGKKKRRGDSEGDATAISNQ

Homology

[Close]

BLAST of CmUC08G144150 vs. NCBI nr
Match: XP_038889902.1 (30-kDa cleavage and polyadenylation specificity factor 30-like [Benincasa hispida])

HSP 1 Score: 1332.8 bits (3448), Expect = 0.0e+00
Identity = 680/746 (91.15%), Postives = 693/746 (92.90%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPLIHSDSSAPPAASAVSNSLSGALGPAVSAE 60
           MEDSEGVLSFDFEGGLDAGPTNPAATSSLPL HSDSSAPPAASAVSNSLSGALGPAVSAE
Sbjct: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPLNHSDSSAPPAASAVSNSLSGALGPAVSAE 60

Query: 61  PPGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120
           PPGA TGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ
Sbjct: 61  PPGASTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120

Query: 121 DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSYNYGPS 180
           DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSYNYG S
Sbjct: 121 DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSYNYGSS 180

Query: 181 NKFFSQRGVGLSQQNEKAQFPQGPAIVAQG-VTGKPSAAESANVQQQQGQQSAQQTSQTP 240
           NKFF+QRGVGLSQQNEK+QFPQG  +V QG VTGKPSAAESANV QQQGQQSAQQTSQTP
Sbjct: 181 NKFFTQRGVGLSQQNEKSQFPQGQPLVTQGVVTGKPSAAESANVPQQQGQQSAQQTSQTP 240

Query: 241 VQSLSNGQPNQLNKTGTSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF 300
           +QSLSNGQPNQLN+T TSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF
Sbjct: 241 IQSLSNGQPNQLNRTATSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF 300

Query: 301 DSADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCEL 360
           DSADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCEL
Sbjct: 301 DSADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCEL 360

Query: 361 SFQKTRHLRNPYNENLPVKRTYPHHPCLQGFLLFLTYCIVPCFTVTLTSYFFGLISRDCQ 420
           SFQKTRHLRNPYNENLPVK                                   ISRDCQ
Sbjct: 361 SFQKTRHLRNPYNENLPVK-----------------------------------ISRDCQ 420

Query: 421 ELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGSENPDIVPFEDNEE 480
           ELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGSENPDIVPFEDNEE
Sbjct: 421 ELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGSENPDIVPFEDNEE 480

Query: 481 EEEEESEEEEEESFGQSVGLPPQGRGRGRGIMWPPHMPMGRGAARPFHGMQGFPPGMMGT 540
           EEEEESEEEEEESFGQSVGLPPQGRGRGRGI+WPPHMPMGRG ARPF GMQGFPPGMMG 
Sbjct: 481 EEEEESEEEEEESFGQSVGLPPQGRGRGRGIVWPPHMPMGRG-ARPFPGMQGFPPGMMGP 540

Query: 541 DGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPTAMMFRGRPSQPGAVFPPG 600
           DGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPTAMMFRGRPSQPGA+FPPG
Sbjct: 541 DGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPTAMMFRGRPSQPGAMFPPG 600

Query: 601 GFGMMIGQGRGPFMGGMGVTGTNPARPGRPVGVPPLYPPPAVPSPQNMNRAIKRDQRGPA 660
           GFGMM+GQGRGPFMGGMG+ GTNP+RPGRPVGV PLYPPPAVPS QNMNRAIKRDQRGPA
Sbjct: 601 GFGMMMGQGRGPFMGGMGIAGTNPSRPGRPVGVSPLYPPPAVPSSQNMNRAIKRDQRGPA 660

Query: 661 SDRNDRYIVGLDQNKGPEMPNSGRDDEMQYKQGSKAYSDEQYGIGATFRNEESESEDEAP 720
           S+RNDRYIVGLDQNKG EMP+SGRDDEMQYKQGSKAYSDEQYG+G TFRNEESESEDEAP
Sbjct: 661 SERNDRYIVGLDQNKGLEMPSSGRDDEMQYKQGSKAYSDEQYGVGTTFRNEESESEDEAP 709

Query: 721 RRSRHGEGKKKRRGDSEGDATAISNQ 746
           RRSRHGEGKKKRRG SEGDATAISNQ
Sbjct: 721 RRSRHGEGKKKRRG-SEGDATAISNQ 709

[Close]

BLAST of CmUC08G144150 vs. NCBI nr
Match: XP_008459517.1 (PREDICTED: 30-kDa cleavage and polyadenylation specificity factor 30-like [Cucumis melo])

HSP 1 Score: 1302.0 bits (3368), Expect = 0.0e+00
Identity = 670/748 (89.57%), Postives = 685/748 (91.58%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPLIHSDSSAPPAASAVSNSLSGALGPAVSAE 60
           MEDSEGVLSFDFEGGLDAGPTNPAATSSLPLI+SDSSAPPAASAVSNSLSGALGPAVSAE
Sbjct: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPLINSDSSAPPAASAVSNSLSGALGPAVSAE 60

Query: 61  PPGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120
           PPGAP GNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ
Sbjct: 61  PPGAPPGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120

Query: 121 DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSYNYGPS 180
           DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSYNYGPS
Sbjct: 121 DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSYNYGPS 180

Query: 181 NKFFSQRGVGLSQQNEKAQFPQGPAIVAQGVTGKPSAAESANVQQQQGQQSAQQTSQTPV 240
           NKFF+QRGVGLSQQNEK+QFPQ PAI  QGVTGKPSAAESANVQQQQGQQSA Q SQTPV
Sbjct: 181 NKFFTQRGVGLSQQNEKSQFPQVPAITTQGVTGKPSAAESANVQQQQGQQSAPQASQTPV 240

Query: 241 QSLSNGQPNQLNKTGTSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300
           Q+LSNGQPNQLN+  TSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD
Sbjct: 241 QNLSNGQPNQLNRNATSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300

Query: 301 SADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360
           +ADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS
Sbjct: 301 TADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360

Query: 361 FQKTRHLRNPYNENLPVKRTYPHHPCLQGFLLFLTYCIVPCFTVTLTSYFFGLISRDCQE 420
           FQKTRHLRNPYNENLPVK                                   ISRDCQE
Sbjct: 361 FQKTRHLRNPYNENLPVK-----------------------------------ISRDCQE 420

Query: 421 LEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGSENPDIVPFEDNEEE 480
           LEPSIGEQLASLLYLEPDGELMAVS+AAESKREEEKAKGVNPDIGSENPDIVPFEDNEEE
Sbjct: 421 LEPSIGEQLASLLYLEPDGELMAVSIAAESKREEEKAKGVNPDIGSENPDIVPFEDNEEE 480

Query: 481 EEEESEEEEEESFGQSVGLPPQGRGRGRGIMWPPHMPMGRGAARPFHGMQGFPPGMMGTD 540
           EEEESEEEEEESFGQSVGLPPQGRGRGRG+MWPP MP+GRG ARPFHGMQGFPPGMMG D
Sbjct: 481 EEEESEEEEEESFGQSVGLPPQGRGRGRGMMWPPQMPIGRG-ARPFHGMQGFPPGMMGPD 540

Query: 541 GLSYGPVTPDGFPMPDIFGMAPRGFGPYG--PRFSGDFMGPPTAMMFRGRPSQPGAVFPP 600
           GLSYGPVTPDGFPMPDIFGMAPRGFGPYG  PRFS DFMGPPTAMMFRGRPSQPGA+FPP
Sbjct: 541 GLSYGPVTPDGFPMPDIFGMAPRGFGPYGPTPRFSSDFMGPPTAMMFRGRPSQPGAMFPP 600

Query: 601 GGFGMMIGQGR-GPFMGGMGVTGTNPARPGRPVGVPPLYPPPAVPSPQNMNRAIKRDQRG 660
           GGFGMM+GQGR GPFMGGMGVTG NPARPGRPVGV PLYPPPAVPS QNMNRAIKRDQRG
Sbjct: 601 GGFGMMMGQGRGGPFMGGMGVTGANPARPGRPVGVSPLYPPPAVPSSQNMNRAIKRDQRG 660

Query: 661 PASDRNDRYIVGLDQNKGPEMPNSGRDDEMQYKQGSKAYSDEQYGIGATFRNEESESEDE 720
                ND+YIVG+DQNKG E+ +SGRDDEMQYKQGSKAYSDEQYG G TFRNEESESEDE
Sbjct: 661 LT---NDKYIVGIDQNKGLEIQSSGRDDEMQYKQGSKAYSDEQYGTGTTFRNEESESEDE 708

Query: 721 APRRSRHGEGKKKRRGDSEGDATAISNQ 746
           APRRSRHGEGKKKRRG SEGDATAISNQ
Sbjct: 721 APRRSRHGEGKKKRRG-SEGDATAISNQ 708

[Close]

BLAST of CmUC08G144150 vs. NCBI nr
Match: XP_004141524.1 (30-kDa cleavage and polyadenylation specificity factor 30 [Cucumis sativus] >KGN52613.1 hypothetical protein Csa_008573 [Cucumis sativus])

HSP 1 Score: 1295.4 bits (3351), Expect = 0.0e+00
Identity = 663/747 (88.76%), Postives = 679/747 (90.90%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPLIHSDSSAPPAASAVSNSLSGALGPAVSAE 60
           MEDSEGVLSFDFEGGLDAGPTNPAATSSLP+I+SDSSAPPAASAVSN LSGALGPAVSAE
Sbjct: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIINSDSSAPPAASAVSNPLSGALGPAVSAE 60

Query: 61  PPGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120
           P GAP GNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ
Sbjct: 61  PTGAPHGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120

Query: 121 DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSYNYGPS 180
           DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPP+EEILQKIQHLGSYNYGPS
Sbjct: 121 DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPLEEILQKIQHLGSYNYGPS 180

Query: 181 NKFFSQRGVGLSQQNEKAQFPQGPAIVAQGVTGKPSAAESANVQQQQGQQSAQQTSQTPV 240
           NKFF+QRGVGLSQQNEK+QFPQ PA+V QGVTGKPSAAES NVQQQQGQQSA Q SQTPV
Sbjct: 181 NKFFTQRGVGLSQQNEKSQFPQVPALVTQGVTGKPSAAESVNVQQQQGQQSAPQASQTPV 240

Query: 241 QSLSNGQPNQLNKTGTSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300
           QSLSNGQPNQLN+  TSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD
Sbjct: 241 QSLSNGQPNQLNRNATSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300

Query: 301 SADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360
           SADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGT HYGQNFSLKWLKLCELS
Sbjct: 301 SADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTPHYGQNFSLKWLKLCELS 360

Query: 361 FQKTRHLRNPYNENLPVKRTYPHHPCLQGFLLFLTYCIVPCFTVTLTSYFFGLISRDCQE 420
           FQKTRHLRNPYNENLPVK                                   ISRDCQE
Sbjct: 361 FQKTRHLRNPYNENLPVK-----------------------------------ISRDCQE 420

Query: 421 LEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGSENPDIVPFEDNEEE 480
           LEPS+GEQLASLLYLEPDGELMAVS+AAESKREEEKAKGVNPDIGSENPDIVPFEDNEEE
Sbjct: 421 LEPSVGEQLASLLYLEPDGELMAVSVAAESKREEEKAKGVNPDIGSENPDIVPFEDNEEE 480

Query: 481 EEEESEEEEEESFGQSVGLPPQGRGRGRGIMWPPHMPMGRGAARPFHGMQGFPPGMMGTD 540
           EEEESEEEEEESFGQS GLPPQGRGRGRG+MWPPHMPMGRG ARPFHGMQGFPPGMMG D
Sbjct: 481 EEEESEEEEEESFGQSAGLPPQGRGRGRGMMWPPHMPMGRG-ARPFHGMQGFPPGMMGPD 540

Query: 541 GLSYGPVTPDGFPMPDIFGMAPRGFGPYG--PRFSGDFMGPPTAMMFRGRPSQPGAVFPP 600
           GLSYGPVTPDGFPMPDIFGM PRGFGPYG  PRFSGDFMGPPTAMMFRGRPSQP A+FPP
Sbjct: 541 GLSYGPVTPDGFPMPDIFGMTPRGFGPYGPTPRFSGDFMGPPTAMMFRGRPSQPAAMFPP 600

Query: 601 GGFGMMIGQGRGPFMGGMGVTGTNPARPGRPVGVPPLYPPPAVPSPQNMNRAIKRDQRGP 660
            GFGMM+GQGRGPFMGGMGV G NPARPGRPVGV PLYPPPAVPS QNMNRAIKRDQRG 
Sbjct: 601 SGFGMMMGQGRGPFMGGMGVAGANPARPGRPVGVSPLYPPPAVPSSQNMNRAIKRDQRGL 660

Query: 661 ASDRNDRYIVGLDQNKGPEMPNSGRDDEMQYKQGSKAYSDEQYGIGATFRNEESESEDEA 720
               NDRYIVG+DQNKG E+ +SGRD+EMQYKQGSKAYSDEQYG G TFRNEESESEDEA
Sbjct: 661 T---NDRYIVGMDQNKGVEIQSSGRDEEMQYKQGSKAYSDEQYGTGTTFRNEESESEDEA 707

Query: 721 PRRSRHGEGKKKRRGDSEGDATAISNQ 746
           PRRSRHGEGKKKRRG SEGDATAISNQ
Sbjct: 721 PRRSRHGEGKKKRRG-SEGDATAISNQ 707

[Close]

BLAST of CmUC08G144150 vs. NCBI nr
Match: KAA0039343.1 (30-kDa cleavage and polyadenylation specificity factor 30-like [Cucumis melo var. makuwa])

HSP 1 Score: 1287.3 bits (3330), Expect = 0.0e+00
Identity = 667/761 (87.65%), Postives = 683/761 (89.75%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPLIHSDSSAPPAASAVSNSLSGALGPAVSAE 60
           MEDSEGVLSFDFEGGLDAGPTNPAATSSLPLI+SDSSAPPAASAVSNSLSGALGPAVSAE
Sbjct: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPLINSDSSAPPAASAVSNSLSGALGPAVSAE 60

Query: 61  PPGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120
           PPGAP GNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ
Sbjct: 61  PPGAPPGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120

Query: 121 DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSYNYGPS 180
           DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSYNYGPS
Sbjct: 121 DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSYNYGPS 180

Query: 181 NKFFSQRGVGLSQQNEKAQFPQGPAIVAQGVTGKPSAAESANVQQQQGQQSAQQTSQTPV 240
           NKFF+QRGVGLSQQNEK+QFPQ PAI  QGVTGKPSAAESANVQQQQGQQSA Q SQTPV
Sbjct: 181 NKFFTQRGVGLSQQNEKSQFPQVPAITTQGVTGKPSAAESANVQQQQGQQSAPQASQTPV 240

Query: 241 QSLSNGQPNQLNKTGTSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300
           Q+LSNGQPNQLN+  TSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD
Sbjct: 241 QNLSNGQPNQLNRNATSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300

Query: 301 SADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360
           +ADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS
Sbjct: 301 TADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360

Query: 361 FQKTRHLRNPYNENLPVKRTYPHHPCLQGFLLFLTYCIVPCFTVTLTSYFFGLISRDCQE 420
           FQKTRHLRNPYNENLPVK                                   ISRDCQE
Sbjct: 361 FQKTRHLRNPYNENLPVK-----------------------------------ISRDCQE 420

Query: 421 LEPSIGEQLASLLYLEPDGELMA-------------VSLAAESKREEEKAKGVNPDIGSE 480
           LEPSIGEQLASLLYLEPDGELMA               ++AESKREEEKAKGVNPDIGSE
Sbjct: 421 LEPSIGEQLASLLYLEPDGELMARKKIKYEEMHFGSSRMSAESKREEEKAKGVNPDIGSE 480

Query: 481 NPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPPQGRGRGRGIMWPPHMPMGRGAARPFH 540
           NPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPPQGRGRGRG+MWPP MP+GRG ARPFH
Sbjct: 481 NPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPPQGRGRGRGMMWPPQMPIGRG-ARPFH 540

Query: 541 GMQGFPPGMMGTDGLSYGPVTPDGFPMPDIFGMAPRGFGPYG--PRFSGDFMGPPTAMMF 600
           GMQGFPPGMMG DGLSYGPVTPDGFPMPDIFGMAPRGFGPYG  PRFS DFMGPPTAMMF
Sbjct: 541 GMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPTPRFSSDFMGPPTAMMF 600

Query: 601 RGRPSQPGAVFPPGGFGMMIGQGR-GPFMGGMGVTGTNPARPGRPVGVPPLYPPPAVPSP 660
           RGRPSQPGA+FPPGGFGMM+GQGR GPFMGGMGVTG NPARPGRPVGV PLYPPPAVPS 
Sbjct: 601 RGRPSQPGAMFPPGGFGMMMGQGRGGPFMGGMGVTGANPARPGRPVGVSPLYPPPAVPSS 660

Query: 661 QNMNRAIKRDQRGPASDRNDRYIVGLDQNKGPEMPNSGRDDEMQYKQGSKAYSDEQYGIG 720
           QNMNRAIKRDQRG     ND+YIVG+DQNKG E+ +SGRDDEMQYKQGSKAYSDEQYG G
Sbjct: 661 QNMNRAIKRDQRGLT---NDKYIVGIDQNKGLEIQSSGRDDEMQYKQGSKAYSDEQYGTG 720

Query: 721 ATFRNEESESEDEAPRRSRHGEGKKKRRGDSEGDATAISNQ 746
            TFRNEESESEDEAPRRSRHGEGKKKRRG SEGDATAISNQ
Sbjct: 721 TTFRNEESESEDEAPRRSRHGEGKKKRRG-SEGDATAISNQ 721

[Close]

BLAST of CmUC08G144150 vs. NCBI nr
Match: XP_038894441.1 (30-kDa cleavage and polyadenylation specificity factor 30-like [Benincasa hispida])

HSP 1 Score: 1273.5 bits (3294), Expect = 0.0e+00
Identity = 650/748 (86.90%), Postives = 673/748 (89.97%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNP---AATSSLPLIHSDSSAPPAASAVSNSLSGALGPAV 60
           MEDS+GVLSFDFEGGLDA PTNP   AA SSLPLIHSDSSAPP   A+SNS+ G LGPA 
Sbjct: 1   MEDSDGVLSFDFEGGLDAAPTNPAAAAAASSLPLIHSDSSAPP---ALSNSVPGPLGPAP 60

Query: 61  SAEPPGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGEC 120
           + E PGAPTGN G+RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGEC
Sbjct: 61  TPEAPGAPTGNAGSRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGEC 120

Query: 121 REQDCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSYNY 180
           REQDCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPP VEEILQKIQH+GSYN+
Sbjct: 121 REQDCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPSVEEILQKIQHIGSYNH 180

Query: 181 GPSNKFFSQRGVGLSQQNEKAQFPQGPAIVAQGVTGKPSAAESANVQQQQGQQSAQQTSQ 240
           GPSNK F QRGVGLSQQNEK+QFPQGPA V QGV GKPS AESANVQQ Q QQS QQTSQ
Sbjct: 181 GPSNKLFLQRGVGLSQQNEKSQFPQGPAPVTQGVIGKPSTAESANVQQPQVQQSTQQTSQ 240

Query: 241 TPVQSLSNGQPNQLNKTGTSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE 300
           T +QSLSNGQPNQLN+T TSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE
Sbjct: 241 TQIQSLSNGQPNQLNRTATSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE 300

Query: 301 AFDSADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLC 360
           AFDSADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLC
Sbjct: 301 AFDSADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLC 360

Query: 361 ELSFQKTRHLRNPYNENLPVKRTYPHHPCLQGFLLFLTYCIVPCFTVTLTSYFFGLISRD 420
           ELSFQKTRHLRNPYNENLPVK                                   ISRD
Sbjct: 361 ELSFQKTRHLRNPYNENLPVK-----------------------------------ISRD 420

Query: 421 CQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGSENPDIVPFEDN 480
           CQELEPSIGEQLASLLYLEPDGELMAVS+AAE+KREEEKAKGVNPDIG+ENPDIVPFEDN
Sbjct: 421 CQELEPSIGEQLASLLYLEPDGELMAVSIAAEAKREEEKAKGVNPDIGNENPDIVPFEDN 480

Query: 481 EEEEEEESEEEEEESFGQSVGLPPQGRGRGRGIMWPPHMPMGRGAARPFHGMQGFPPGMM 540
           EEEEEEESEEEEEESFGQSVGLP QGRGRGRGIMWPPHMPMGRG ARPFHGMQGFPPGM+
Sbjct: 481 EEEEEEESEEEEEESFGQSVGLPAQGRGRGRGIMWPPHMPMGRG-ARPFHGMQGFPPGMI 540

Query: 541 GTDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPTAMMFRGRPSQPGAVFP 600
           G DGLSYGPVTP+GFPMPDIFGMAPRGFGPYGPRFSGDFMGPP+AMMFRGRPSQPGA+F 
Sbjct: 541 GPDGLSYGPVTPEGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFS 600

Query: 601 PGGFGMMIGQGRGPFMGGMGVTGTNPARPGRPVGVPPLYPPPAVPSPQNMNRAIKRDQRG 660
           P GFGMM+GQGRGPFMGGMGVTGTNPARPGRPVGV PLYPPPAVPSPQN+NRA+KRDQRG
Sbjct: 601 PSGFGMMMGQGRGPFMGGMGVTGTNPARPGRPVGVSPLYPPPAVPSPQNINRAVKRDQRG 660

Query: 661 PASDRNDRYIVGLDQNKGPEMPNSGRDDEMQYKQGSKAYSDEQYGIGATFRNEESESEDE 720
           P SDRNDRYIVGLDQNKG EMP SG DD MQYKQGSK YSDEQYG+G TFRNEESESEDE
Sbjct: 661 PTSDRNDRYIVGLDQNKGQEMPGSGYDDGMQYKQGSKGYSDEQYGMGTTFRNEESESEDE 708

Query: 721 APRRSRHGEGKKKRRGDSEGDATAISNQ 746
           APRRSRHGEGK+KRRG SEGDATAIS+Q
Sbjct: 721 APRRSRHGEGKEKRRG-SEGDATAISDQ 708

[Close]

BLAST of CmUC08G144150 vs. ExPASy Swiss-Prot
Match: A9LNK9 (30-kDa cleavage and polyadenylation specificity factor 30 OS=Arabidopsis thaliana OX=3702 GN=CPSF30 PE=1 SV=1)

HSP 1 Score: 761.5 bits (1965), Expect = 8.7e-219
Identity = 443/734 (60.35%), Postives = 501/734 (68.26%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPLIHSDSSAPPAASAVSNSLSGALGPAVSAE 60
           MED++G LSFDFEGGLD+GP     T+S+P+      APP      NS S A+  A + +
Sbjct: 1   MEDADG-LSFDFEGGLDSGPVQ--NTASVPV------APP-----ENSSSAAVNVAPTYD 60

Query: 61  PPGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120
              A     G  RSFRQTVCRHWLR LCMKGDACGFLHQ+DK+RMPICRFFRLYGECREQ
Sbjct: 61  HSSATVAGAGRGRSFRQTVCRHWLRGLCMKGDACGFLHQFDKARMPICRFFRLYGECREQ 120

Query: 121 DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSYNYGPS 180
           DCVYKHTNEDIKECNMYK GFCPNGPDCRYRHAKLPGPPPPVEE+LQKIQ L +YNYG +
Sbjct: 121 DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLTTYNYG-T 180

Query: 181 NKFFSQRGVGLSQQNEKAQFPQGPAIVAQGVTGKPSAAESANVQQQQGQQSAQQTSQTPV 240
           N+ +  R V    Q+     PQG       + G+P   ES N+QQQQ QQ  QQ+     
Sbjct: 181 NRLYQARNVAPQLQDR----PQGQV----PMQGQPQ--ESGNLQQQQ-QQQPQQSQHQVS 240

Query: 241 QSLSNGQPNQLNKTGTSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300
           Q+L     +Q N+T   LPQG++RYF+VKS NREN ELSVQQGVWATQRSNEAKLNEAFD
Sbjct: 241 QTLIPNPADQTNRTSHPLPQGVNRYFVVKSNNRENFELSVQQGVWATQRSNEAKLNEAFD 300

Query: 301 SADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360
           S +NVILIFSVNRTRHFQGCAKM SRIGG + GGNWK+ HGTA YG+NFS+KWLKLCELS
Sbjct: 301 SVENVILIFSVNRTRHFQGCAKMTSRIGGYIGGGNWKHEHGTAQYGRNFSVKWLKLCELS 360

Query: 361 FQKTRHLRNPYNENLPVKRTYPHHPCLQGFLLFLTYCIVPCFTVTLTSYFFGLISRDCQE 420
           F KTR+LRNPYNENLPVK                                   ISRDCQE
Sbjct: 361 FHKTRNLRNPYNENLPVK-----------------------------------ISRDCQE 420

Query: 421 LEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGSENPDIVPFEDNEEE 480
           LEPS+GEQLASLLYLEPD ELMA+S+AAE+KREEEKAKGVNP+  +ENPDIVPFEDNEEE
Sbjct: 421 LEPSVGEQLASLLYLEPDSELMAISIAAEAKREEEKAKGVNPESRAENPDIVPFEDNEEE 480

Query: 481 EEEESEEEEEESFGQSVGLPPQGRGRGRGIMWPPHMPMGRGAARPFHGMQGFPPGMMGT- 540
           EEEE E EEEE   +S+   PQGRGRGRGIMWPP MP+GRG  RP  GM GFP G+MG  
Sbjct: 481 EEEEDESEEEE---ESMAGGPQGRGRGRGIMWPPQMPLGRG-IRPMPGMGGFPLGVMGPG 540

Query: 541 DGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPTAMMFRGRPSQPGAVFPPG 600
           D   YGP   +G  MPD FGM PR FGPYGPRF GDF GP   MMF GRP Q    FP G
Sbjct: 541 DAFPYGPGGYNG--MPDPFGMGPRPFGPYGPRFGGDFRGPVPGMMFPGRPPQQ---FPHG 600

Query: 601 GFGMMIGQGRGPFMGGMGVTGTNPARPGRPVGVPPLYPPPAVPSPQNMNRAIKRDQRGPA 660
           G+GMM G GRGP MGGMG    N  R GRP+  PP     A P P N     + D+RG +
Sbjct: 601 GYGMM-GGGRGPHMGGMG----NAPRGGRPMYYPPA-TSSARPGPSNRKTPERSDERGVS 631

Query: 661 SDRNDRYIVGLDQNKGPEMPNSGRDDEMQYKQGSKAYSDEQYGIGATFRNEESES--EDE 720
            D+ ++                             ++  EQ+ +G + RNEESES  EDE
Sbjct: 661 GDQQNQ---------------------------DASHDMEQFEVGNSLRNEESESEDEDE 631

Query: 721 APRRSRHGEGKKKR 732
           APRRSRHGEGKK+R
Sbjct: 721 APRRSRHGEGKKRR 631

[Close]

BLAST of CmUC08G144150 vs. ExPASy Swiss-Prot
Match: Q0DA50 (Zinc finger CCCH domain-containing protein 45 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0677700 PE=4 SV=1)

HSP 1 Score: 701.0 bits (1808), Expect = 1.4e-200
Identity = 414/742 (55.80%), Postives = 486/742 (65.50%), Query Frame = 0


Query: 5   EGVLSFDFEGGLDAGPTNPAATSSLPLIHSDSSAPPAASAVSNSLSGALGPAVSAEPPGA 64
           +G LSFDFEGGLD     PA     P  HS                G  GP       G 
Sbjct: 3   DGDLSFDFEGGLD---QPPAGGGGGPAPHSSDPGGVGGG------GGGGGPG-----DGG 62

Query: 65  PTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCVY 124
             G    R S+RQTVCRHWLR LCMKG+ACGFLHQ+DK+RMP+CRFFR +GECRE DC Y
Sbjct: 63  GHGRGRGRGSYRQTVCRHWLRGLCMKGEACGFLHQFDKARMPVCRFFRDFGECREPDCAY 122

Query: 125 KHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSYNYGPSNKFF 184
           KH+ +D+KECNMYK GFCPNGP+CRY+H KLPGPPPPVEE+LQKI  + S+     NKF 
Sbjct: 123 KHSYDDVKECNMYKMGFCPNGPNCRYKHVKLPGPPPPVEEVLQKILQIRSF-----NKFN 182

Query: 185 SQRGVGLSQQNEKAQFPQGPAIVAQG-------VTGKPSAAESANV------QQQQGQQS 244
             R    +QQ E+ Q PQG  +  Q         T +P+  + A        QQQQ QQ 
Sbjct: 183 QHRHNNYNQQGERPQHPQGSGLPNQNSIDNTTTTTAQPAVGQQAQTTNQQPPQQQQQQQQ 242

Query: 245 AQQTSQTP-----VQSLSNGQPNQLNKTGTSLPQGISRYFIVKSCNRENLELSVQQGVWA 304
            QQ  Q P     VQS+ NG  NQ  +  T LPQG SRYFIVKSCNRENLE+SVQQG+WA
Sbjct: 243 QQQQQQKPNTNDQVQSVPNGSSNQATRIATPLPQGPSRYFIVKSCNRENLEISVQQGIWA 302

Query: 305 TQRSNEAKLNEAFDSADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYG 364
           TQRSNEAKLNEAF+S +NVILIFS+NRTR+FQGCAKM SRIGG + GGNWK AHGTAHYG
Sbjct: 303 TQRSNEAKLNEAFESIENVILIFSINRTRNFQGCAKMTSRIGGYIGGGNWKSAHGTAHYG 362

Query: 365 QNFSLKWLKLCELSFQKTRHLRNPYNENLPVKRTYPHHPCLQGFLLFLTYCIVPCFTVTL 424
           +NFS++WLKLCELSFQKT HLRNPYN+NLPVK                            
Sbjct: 363 RNFSIQWLKLCELSFQKTHHLRNPYNDNLPVK---------------------------- 422

Query: 425 TSYFFGLISRDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGS 484
                  ISRDCQELEP IGEQLASLLYLEPD EL A+ +AAE+K+EEEKAKGV+ D  +
Sbjct: 423 -------ISRDCQELEPFIGEQLASLLYLEPDSELTAILIAAEAKKEEEKAKGVSADEAA 482

Query: 485 ENPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPPQGRGRGRGIMWPPHMPMGRGAARPF 544
           +N DIV F+DNEEEEEEESEEEEE +     G   QGRGRGRG+MWPP MPM RG   P 
Sbjct: 483 DNQDIVLFDDNEEEEEEESEEEEEGN-----GQESQGRGRGRGMMWPPQMPMLRGVG-PM 542

Query: 545 HGMQGFPPGMMGTDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFM--GPPTAMM 604
            G +GFPP M+G DG  +G     GF MPD FG+ PRGF P+GPRF GDF   GP   M+
Sbjct: 543 MGGRGFPPNMIG-DGFGFG----GGFGMPDPFGV-PRGFPPFGPRFPGDFARGGPMPGMV 602

Query: 605 FRGRPSQPGAVFPPGGFGMMIGQGRGPFMGGMGVTGTNPARPGRPVGVPPLYPPPAVPSP 664
           F GRP QPG +FP  G  MM+G GRGP MGG+G+ G  P RP RPVG+ P  PPP  P+ 
Sbjct: 603 FPGRPPQPGGMFPM-GLEMMMGPGRGPLMGGLGMGG--PGRPNRPVGMAPFMPPPPPPN- 662

Query: 665 QNMNRAIKRDQRGPASDRNDRYIVGLDQ-NKGPEMP-NSGRDDEMQYKQGSKAYSDEQYG 724
              NR  KR+QR P  +R DRY    DQ ++G +   NSG        +G+++ S ++YG
Sbjct: 663 ---NRGTKREQRRPGGERGDRYETTSDQGSRGHDATGNSG-------AEGARSQSGDRYG 663

[Close]

BLAST of CmUC08G144150 vs. ExPASy Swiss-Prot
Match: Q5R746 (3'-5' RNA helicase YTHDC2 OS=Pongo abelii OX=9601 GN=YTHDC2 PE=2 SV=2)

HSP 1 Score: 104.8 bits (260), Expect = 4.4e-21
Identity = 78/221 (35.29%), Postives = 106/221 (47.96%), Query Frame = 0


Query: 224  QQQQGQQSAQQTSQ----TPVQSLSNGQPNQLNKTGTSLPQGISRYFIVKSCNRENLELS 283
            + +  Q S + T      +P  S S     + +K+ +  P    RYFI+KS N  NLE+S
Sbjct: 1245 EDRSDQSSVKSTDSSSYPSPCASPSPPSSGKGSKSPSPRPNMPVRYFIMKSSNLRNLEIS 1304

Query: 284  VQQGVWATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYA 343
             Q+G+W+T  SNE KLN AF  +  V L+FSV  + HFQG ++M S IG   S  +W   
Sbjct: 1305 QQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRMSSEIGREKS-QDW--- 1364

Query: 344  HGTAHYGQNFSLKWLKLCELSFQKTRHLRNPYNENLPVKRTYPHHPCLQGFLLFLTYCIV 403
             G+A  G  F ++W++   L FQ   HL NP+N+N  V+                     
Sbjct: 1365 -GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQ--------------------- 1424

Query: 404  PCFTVTLTSYFFGLISRDCQELEPSIGEQLASLLYLEPDGE 441
                          ISRD QELEP +GEQL  L    P GE
Sbjct: 1425 --------------ISRDGQELEPQVGEQLLQLWERLPLGE 1425

[Close]

BLAST of CmUC08G144150 vs. ExPASy Swiss-Prot
Match: Q9H6S0 (3'-5' RNA helicase YTHDC2 OS=Homo sapiens OX=9606 GN=YTHDC2 PE=1 SV=2)

HSP 1 Score: 103.2 bits (256), Expect = 1.3e-20
Identity = 78/221 (35.29%), Postives = 106/221 (47.96%), Query Frame = 0


Query: 224  QQQQGQQSAQQTSQ----TPVQSLSNGQPNQLNKTGTSLPQGISRYFIVKSCNRENLELS 283
            + +  Q S + T      +P  S S     + +K+ +  P    RYFI+KS N  NLE+S
Sbjct: 1245 EDRSDQSSLKSTDSSSYPSPCASPSPPSSGKGSKSPSPRPNMPVRYFIMKSSNLRNLEIS 1304

Query: 284  VQQGVWATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYA 343
             Q+G+W+T  SNE KLN AF  +  V L+FSV  + HFQG ++M S IG   S  +W   
Sbjct: 1305 QQKGIWSTTPSNERKLNRAFWESSIVYLVFSVQGSGHFQGFSRMSSEIGREKS-QDW--- 1364

Query: 344  HGTAHYGQNFSLKWLKLCELSFQKTRHLRNPYNENLPVKRTYPHHPCLQGFLLFLTYCIV 403
             G+A  G  F ++W++   L FQ   HL NP+N+N  V+                     
Sbjct: 1365 -GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQ--------------------- 1424

Query: 404  PCFTVTLTSYFFGLISRDCQELEPSIGEQLASLLYLEPDGE 441
                          ISRD QELEP +GEQL  L    P GE
Sbjct: 1425 --------------ISRDGQELEPLVGEQLLQLWERLPLGE 1425

[Close]

BLAST of CmUC08G144150 vs. ExPASy Swiss-Prot
Match: B2RR83 (3'-5' RNA helicase YTHDC2 OS=Mus musculus OX=10090 GN=Ythdc2 PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 1.3e-20
Identity = 77/226 (34.07%), Postives = 106/226 (46.90%), Query Frame = 0


Query: 215  PSAAESANVQQQQGQQSAQQTSQTPVQSLSNGQPNQLNKTGTSLPQGISRYFIVKSCNRE 274
            P  +      Q   + +   +  +P  S S     + +K+ +  P    RYFI+KS N  
Sbjct: 1255 PKRSTDDRSDQSSVKSTDSSSYPSPCASPSPPSSGKGSKSPSPRPNMPIRYFIMKSSNLR 1314

Query: 275  NLELSVQQGVWATQRSNEAKLNEAFDSADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGG 334
            NLE+S Q+G+W+T  SNE KLN AF  +  V L+FSV  + HFQG ++M S IG   S  
Sbjct: 1315 NLEISQQKGIWSTTPSNERKLNRAFWESSMVYLVFSVQGSGHFQGFSRMSSEIGREKS-Q 1374

Query: 335  NWKYAHGTAHYGQNFSLKWLKLCELSFQKTRHLRNPYNENLPVKRTYPHHPCLQGFLLFL 394
            +W    G+A  G  F ++W++   L FQ   HL NP+N+N  V+                
Sbjct: 1375 DW----GSAGLGGVFKVEWIRKESLPFQFAHHLLNPWNDNKKVQ---------------- 1434

Query: 395  TYCIVPCFTVTLTSYFFGLISRDCQELEPSIGEQLASLLYLEPDGE 441
                               ISRD QELEP +GEQL  L    P GE
Sbjct: 1435 -------------------ISRDGQELEPQVGEQLLQLWERLPLGE 1440

[Close]

BLAST of CmUC08G144150 vs. ExPASy TrEMBL
Match: A0A1S3CAV8 (30-kDa cleavage and polyadenylation specificity factor 30-like OS=Cucumis melo OX=3656 GN=LOC103498632 PE=4 SV=1)

HSP 1 Score: 1302.0 bits (3368), Expect = 0.0e+00
Identity = 670/748 (89.57%), Postives = 685/748 (91.58%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPLIHSDSSAPPAASAVSNSLSGALGPAVSAE 60
           MEDSEGVLSFDFEGGLDAGPTNPAATSSLPLI+SDSSAPPAASAVSNSLSGALGPAVSAE
Sbjct: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPLINSDSSAPPAASAVSNSLSGALGPAVSAE 60

Query: 61  PPGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120
           PPGAP GNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ
Sbjct: 61  PPGAPPGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120

Query: 121 DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSYNYGPS 180
           DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSYNYGPS
Sbjct: 121 DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSYNYGPS 180

Query: 181 NKFFSQRGVGLSQQNEKAQFPQGPAIVAQGVTGKPSAAESANVQQQQGQQSAQQTSQTPV 240
           NKFF+QRGVGLSQQNEK+QFPQ PAI  QGVTGKPSAAESANVQQQQGQQSA Q SQTPV
Sbjct: 181 NKFFTQRGVGLSQQNEKSQFPQVPAITTQGVTGKPSAAESANVQQQQGQQSAPQASQTPV 240

Query: 241 QSLSNGQPNQLNKTGTSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300
           Q+LSNGQPNQLN+  TSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD
Sbjct: 241 QNLSNGQPNQLNRNATSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300

Query: 301 SADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360
           +ADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS
Sbjct: 301 TADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360

Query: 361 FQKTRHLRNPYNENLPVKRTYPHHPCLQGFLLFLTYCIVPCFTVTLTSYFFGLISRDCQE 420
           FQKTRHLRNPYNENLPVK                                   ISRDCQE
Sbjct: 361 FQKTRHLRNPYNENLPVK-----------------------------------ISRDCQE 420

Query: 421 LEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGSENPDIVPFEDNEEE 480
           LEPSIGEQLASLLYLEPDGELMAVS+AAESKREEEKAKGVNPDIGSENPDIVPFEDNEEE
Sbjct: 421 LEPSIGEQLASLLYLEPDGELMAVSIAAESKREEEKAKGVNPDIGSENPDIVPFEDNEEE 480

Query: 481 EEEESEEEEEESFGQSVGLPPQGRGRGRGIMWPPHMPMGRGAARPFHGMQGFPPGMMGTD 540
           EEEESEEEEEESFGQSVGLPPQGRGRGRG+MWPP MP+GRG ARPFHGMQGFPPGMMG D
Sbjct: 481 EEEESEEEEEESFGQSVGLPPQGRGRGRGMMWPPQMPIGRG-ARPFHGMQGFPPGMMGPD 540

Query: 541 GLSYGPVTPDGFPMPDIFGMAPRGFGPYG--PRFSGDFMGPPTAMMFRGRPSQPGAVFPP 600
           GLSYGPVTPDGFPMPDIFGMAPRGFGPYG  PRFS DFMGPPTAMMFRGRPSQPGA+FPP
Sbjct: 541 GLSYGPVTPDGFPMPDIFGMAPRGFGPYGPTPRFSSDFMGPPTAMMFRGRPSQPGAMFPP 600

Query: 601 GGFGMMIGQGR-GPFMGGMGVTGTNPARPGRPVGVPPLYPPPAVPSPQNMNRAIKRDQRG 660
           GGFGMM+GQGR GPFMGGMGVTG NPARPGRPVGV PLYPPPAVPS QNMNRAIKRDQRG
Sbjct: 601 GGFGMMMGQGRGGPFMGGMGVTGANPARPGRPVGVSPLYPPPAVPSSQNMNRAIKRDQRG 660

Query: 661 PASDRNDRYIVGLDQNKGPEMPNSGRDDEMQYKQGSKAYSDEQYGIGATFRNEESESEDE 720
                ND+YIVG+DQNKG E+ +SGRDDEMQYKQGSKAYSDEQYG G TFRNEESESEDE
Sbjct: 661 LT---NDKYIVGIDQNKGLEIQSSGRDDEMQYKQGSKAYSDEQYGTGTTFRNEESESEDE 708

Query: 721 APRRSRHGEGKKKRRGDSEGDATAISNQ 746
           APRRSRHGEGKKKRRG SEGDATAISNQ
Sbjct: 721 APRRSRHGEGKKKRRG-SEGDATAISNQ 708

[Close]

BLAST of CmUC08G144150 vs. ExPASy TrEMBL
Match: A0A0A0KSR6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G647360 PE=4 SV=1)

HSP 1 Score: 1295.4 bits (3351), Expect = 0.0e+00
Identity = 663/747 (88.76%), Postives = 679/747 (90.90%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPLIHSDSSAPPAASAVSNSLSGALGPAVSAE 60
           MEDSEGVLSFDFEGGLDAGPTNPAATSSLP+I+SDSSAPPAASAVSN LSGALGPAVSAE
Sbjct: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPIINSDSSAPPAASAVSNPLSGALGPAVSAE 60

Query: 61  PPGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120
           P GAP GNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ
Sbjct: 61  PTGAPHGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120

Query: 121 DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSYNYGPS 180
           DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPP+EEILQKIQHLGSYNYGPS
Sbjct: 121 DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPLEEILQKIQHLGSYNYGPS 180

Query: 181 NKFFSQRGVGLSQQNEKAQFPQGPAIVAQGVTGKPSAAESANVQQQQGQQSAQQTSQTPV 240
           NKFF+QRGVGLSQQNEK+QFPQ PA+V QGVTGKPSAAES NVQQQQGQQSA Q SQTPV
Sbjct: 181 NKFFTQRGVGLSQQNEKSQFPQVPALVTQGVTGKPSAAESVNVQQQQGQQSAPQASQTPV 240

Query: 241 QSLSNGQPNQLNKTGTSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300
           QSLSNGQPNQLN+  TSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD
Sbjct: 241 QSLSNGQPNQLNRNATSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300

Query: 301 SADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360
           SADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGT HYGQNFSLKWLKLCELS
Sbjct: 301 SADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTPHYGQNFSLKWLKLCELS 360

Query: 361 FQKTRHLRNPYNENLPVKRTYPHHPCLQGFLLFLTYCIVPCFTVTLTSYFFGLISRDCQE 420
           FQKTRHLRNPYNENLPVK                                   ISRDCQE
Sbjct: 361 FQKTRHLRNPYNENLPVK-----------------------------------ISRDCQE 420

Query: 421 LEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGSENPDIVPFEDNEEE 480
           LEPS+GEQLASLLYLEPDGELMAVS+AAESKREEEKAKGVNPDIGSENPDIVPFEDNEEE
Sbjct: 421 LEPSVGEQLASLLYLEPDGELMAVSVAAESKREEEKAKGVNPDIGSENPDIVPFEDNEEE 480

Query: 481 EEEESEEEEEESFGQSVGLPPQGRGRGRGIMWPPHMPMGRGAARPFHGMQGFPPGMMGTD 540
           EEEESEEEEEESFGQS GLPPQGRGRGRG+MWPPHMPMGRG ARPFHGMQGFPPGMMG D
Sbjct: 481 EEEESEEEEEESFGQSAGLPPQGRGRGRGMMWPPHMPMGRG-ARPFHGMQGFPPGMMGPD 540

Query: 541 GLSYGPVTPDGFPMPDIFGMAPRGFGPYG--PRFSGDFMGPPTAMMFRGRPSQPGAVFPP 600
           GLSYGPVTPDGFPMPDIFGM PRGFGPYG  PRFSGDFMGPPTAMMFRGRPSQP A+FPP
Sbjct: 541 GLSYGPVTPDGFPMPDIFGMTPRGFGPYGPTPRFSGDFMGPPTAMMFRGRPSQPAAMFPP 600

Query: 601 GGFGMMIGQGRGPFMGGMGVTGTNPARPGRPVGVPPLYPPPAVPSPQNMNRAIKRDQRGP 660
            GFGMM+GQGRGPFMGGMGV G NPARPGRPVGV PLYPPPAVPS QNMNRAIKRDQRG 
Sbjct: 601 SGFGMMMGQGRGPFMGGMGVAGANPARPGRPVGVSPLYPPPAVPSSQNMNRAIKRDQRGL 660

Query: 661 ASDRNDRYIVGLDQNKGPEMPNSGRDDEMQYKQGSKAYSDEQYGIGATFRNEESESEDEA 720
               NDRYIVG+DQNKG E+ +SGRD+EMQYKQGSKAYSDEQYG G TFRNEESESEDEA
Sbjct: 661 T---NDRYIVGMDQNKGVEIQSSGRDEEMQYKQGSKAYSDEQYGTGTTFRNEESESEDEA 707

Query: 721 PRRSRHGEGKKKRRGDSEGDATAISNQ 746
           PRRSRHGEGKKKRRG SEGDATAISNQ
Sbjct: 721 PRRSRHGEGKKKRRG-SEGDATAISNQ 707

[Close]

BLAST of CmUC08G144150 vs. ExPASy TrEMBL
Match: A0A5A7T8Q5 (30-kDa cleavage and polyadenylation specificity factor 30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G001410 PE=4 SV=1)

HSP 1 Score: 1287.3 bits (3330), Expect = 0.0e+00
Identity = 667/761 (87.65%), Postives = 683/761 (89.75%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPLIHSDSSAPPAASAVSNSLSGALGPAVSAE 60
           MEDSEGVLSFDFEGGLDAGPTNPAATSSLPLI+SDSSAPPAASAVSNSLSGALGPAVSAE
Sbjct: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPLINSDSSAPPAASAVSNSLSGALGPAVSAE 60

Query: 61  PPGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120
           PPGAP GNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ
Sbjct: 61  PPGAPPGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120

Query: 121 DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSYNYGPS 180
           DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSYNYGPS
Sbjct: 121 DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSYNYGPS 180

Query: 181 NKFFSQRGVGLSQQNEKAQFPQGPAIVAQGVTGKPSAAESANVQQQQGQQSAQQTSQTPV 240
           NKFF+QRGVGLSQQNEK+QFPQ PAI  QGVTGKPSAAESANVQQQQGQQSA Q SQTPV
Sbjct: 181 NKFFTQRGVGLSQQNEKSQFPQVPAITTQGVTGKPSAAESANVQQQQGQQSAPQASQTPV 240

Query: 241 QSLSNGQPNQLNKTGTSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300
           Q+LSNGQPNQLN+  TSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD
Sbjct: 241 QNLSNGQPNQLNRNATSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300

Query: 301 SADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360
           +ADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS
Sbjct: 301 TADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360

Query: 361 FQKTRHLRNPYNENLPVKRTYPHHPCLQGFLLFLTYCIVPCFTVTLTSYFFGLISRDCQE 420
           FQKTRHLRNPYNENLPVK                                   ISRDCQE
Sbjct: 361 FQKTRHLRNPYNENLPVK-----------------------------------ISRDCQE 420

Query: 421 LEPSIGEQLASLLYLEPDGELMA-------------VSLAAESKREEEKAKGVNPDIGSE 480
           LEPSIGEQLASLLYLEPDGELMA               ++AESKREEEKAKGVNPDIGSE
Sbjct: 421 LEPSIGEQLASLLYLEPDGELMARKKIKYEEMHFGSSRMSAESKREEEKAKGVNPDIGSE 480

Query: 481 NPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPPQGRGRGRGIMWPPHMPMGRGAARPFH 540
           NPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPPQGRGRGRG+MWPP MP+GRG ARPFH
Sbjct: 481 NPDIVPFEDNEEEEEEESEEEEEESFGQSVGLPPQGRGRGRGMMWPPQMPIGRG-ARPFH 540

Query: 541 GMQGFPPGMMGTDGLSYGPVTPDGFPMPDIFGMAPRGFGPYG--PRFSGDFMGPPTAMMF 600
           GMQGFPPGMMG DGLSYGPVTPDGFPMPDIFGMAPRGFGPYG  PRFS DFMGPPTAMMF
Sbjct: 541 GMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPTPRFSSDFMGPPTAMMF 600

Query: 601 RGRPSQPGAVFPPGGFGMMIGQGR-GPFMGGMGVTGTNPARPGRPVGVPPLYPPPAVPSP 660
           RGRPSQPGA+FPPGGFGMM+GQGR GPFMGGMGVTG NPARPGRPVGV PLYPPPAVPS 
Sbjct: 601 RGRPSQPGAMFPPGGFGMMMGQGRGGPFMGGMGVTGANPARPGRPVGVSPLYPPPAVPSS 660

Query: 661 QNMNRAIKRDQRGPASDRNDRYIVGLDQNKGPEMPNSGRDDEMQYKQGSKAYSDEQYGIG 720
           QNMNRAIKRDQRG     ND+YIVG+DQNKG E+ +SGRDDEMQYKQGSKAYSDEQYG G
Sbjct: 661 QNMNRAIKRDQRGLT---NDKYIVGIDQNKGLEIQSSGRDDEMQYKQGSKAYSDEQYGTG 720

Query: 721 ATFRNEESESEDEAPRRSRHGEGKKKRRGDSEGDATAISNQ 746
            TFRNEESESEDEAPRRSRHGEGKKKRRG SEGDATAISNQ
Sbjct: 721 TTFRNEESESEDEAPRRSRHGEGKKKRRG-SEGDATAISNQ 721

[Close]

BLAST of CmUC08G144150 vs. ExPASy TrEMBL
Match: A0A6J1CE78 (30-kDa cleavage and polyadenylation specificity factor 30 OS=Momordica charantia OX=3673 GN=LOC111010855 PE=4 SV=1)

HSP 1 Score: 1271.5 bits (3289), Expect = 0.0e+00
Identity = 652/745 (87.52%), Postives = 666/745 (89.40%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPLIHSDSSAPPAASAVSNSLSGALGPAVSAE 60
           MED EGVLSFDFEGGLDAGPTNPAAT SLPLI SD SAPPAASAVS+S  GA+G AV+ E
Sbjct: 1   MEDPEGVLSFDFEGGLDAGPTNPAAT-SLPLIQSDPSAPPAASAVSSSGPGAVGHAVTVE 60

Query: 61  PPGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120
             GA TGNVG+RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ
Sbjct: 61  AGGAVTGNVGSRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120

Query: 121 DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSYNYGPS 180
           DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHL SYNYGPS
Sbjct: 121 DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLSSYNYGPS 180

Query: 181 NKFFSQRGVGLSQQNEKAQFPQGPAIVAQGVTGKPSAAESANVQQQQGQQSAQQTSQTPV 240
           NKFFSQRG GLS Q EK QFPQGPA V QGV GKPS AESANVQQ Q QQSAQQTSQT +
Sbjct: 181 NKFFSQRGAGLSHQIEKPQFPQGPATVNQGVVGKPSTAESANVQQPQAQQSAQQTSQTQI 240

Query: 241 QSLSNGQPNQLNKTGTSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300
           QSLSNGQPNQLN+T TSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD
Sbjct: 241 QSLSNGQPNQLNRTATSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300

Query: 301 SADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360
           SADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS
Sbjct: 301 SADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360

Query: 361 FQKTRHLRNPYNENLPVKRTYPHHPCLQGFLLFLTYCIVPCFTVTLTSYFFGLISRDCQE 420
           FQKTRHLRNPYNENLPVK                                   ISRDCQE
Sbjct: 361 FQKTRHLRNPYNENLPVK-----------------------------------ISRDCQE 420

Query: 421 LEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGSENPDIVPFEDNEEE 480
           LEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGSENPDIVPFEDNEEE
Sbjct: 421 LEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGSENPDIVPFEDNEEE 480

Query: 481 EEEESEEEEEESFGQSVGLPPQGRGRGRGIMWPPHMPMGRGAARPFHGMQGFPPGMMGTD 540
           EEEESEEEEEESFGQSVGLP QGRGRGRGIMWPPHMPMGRG ARPFHGMQGFPPGMMG D
Sbjct: 481 EEEESEEEEEESFGQSVGLPAQGRGRGRGIMWPPHMPMGRG-ARPFHGMQGFPPGMMGPD 540

Query: 541 GLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPTAMMFRGRPSQPGAVFPPGG 600
           GLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPP+AMMFRGRPSQPGA+FPPGG
Sbjct: 541 GLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAMFPPGG 600

Query: 601 FGMMIGQGRGPFMGGMGVTGTNPARPGRPVGVPPLYPPPAVPSPQNMNRAIKRDQRGPAS 660
           FGMM+GQGRGPFMGGMGVTG NPARPGRPV V  LYPPPAVP  QNMNR +KRDQRGP +
Sbjct: 601 FGMMMGQGRGPFMGGMGVTGANPARPGRPVSVSQLYPPPAVPPSQNMNRVVKRDQRGPGN 660

Query: 661 DRNDRYIVGLDQNKGPEMPNSGRDDEMQYKQGSKAYSDEQYGIGATFRNEESESEDEAPR 720
           DRNDRYI G DQ+KG EMP SG DDEMQYKQGSKAY DEQYGIG TFRNEESESEDEAPR
Sbjct: 661 DRNDRYIAGPDQSKGQEMPGSGHDDEMQYKQGSKAYPDEQYGIGTTFRNEESESEDEAPR 707

Query: 721 RSRHGEGKKKRRGDSEGDATAISNQ 746
           RSRHGEGKKKRRG SEGDAT +S+Q
Sbjct: 721 RSRHGEGKKKRRG-SEGDATVVSDQ 707

[Close]

BLAST of CmUC08G144150 vs. ExPASy TrEMBL
Match: A0A5D3C2W1 (30-kDa cleavage and polyadenylation specificity factor 30 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold178G00560 PE=4 SV=1)

HSP 1 Score: 1265.0 bits (3272), Expect = 0.0e+00
Identity = 651/750 (86.80%), Postives = 671/750 (89.47%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAA-----TSSLPLIHSDSSAPPAASAVSNSLSGALGP 60
           MEDSEGVLSFDFEGGLDA PTNPAA     +SSLPLI SDSSAPP    +SNSL G+LGP
Sbjct: 1   MEDSEGVLSFDFEGGLDAAPTNPAAAAAASSSSLPLIPSDSSAPP---PLSNSLPGSLGP 60

Query: 61  AVSAEPPGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYG 120
            ++ EP GAPT NVG RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYG
Sbjct: 61  TLAPEPLGAPTANVGTRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYG 120

Query: 121 ECREQDCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSY 180
           ECREQDCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPP VEEILQKIQHLGSY
Sbjct: 121 ECREQDCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPSVEEILQKIQHLGSY 180

Query: 181 NYGPSNKFFSQRGVGLSQQNEKAQFPQGPAIVAQGVTGKPSAAESANVQQQQGQQSAQQT 240
           NYG SNKFFSQRGVGL QQNEK+QFPQGPA V QGV GKPS AESANVQQQQ QQ AQQT
Sbjct: 181 NYGSSNKFFSQRGVGLPQQNEKSQFPQGPAPVTQGVIGKPSTAESANVQQQQVQQPAQQT 240

Query: 241 SQTPVQSLSNGQPNQLNKTGTSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKL 300
           SQT +QS+SNGQPNQLN+T TSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKL
Sbjct: 241 SQTQIQSVSNGQPNQLNRTATSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKL 300

Query: 301 NEAFDSADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLK 360
           NEAFDSADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLK
Sbjct: 301 NEAFDSADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLK 360

Query: 361 LCELSFQKTRHLRNPYNENLPVKRTYPHHPCLQGFLLFLTYCIVPCFTVTLTSYFFGLIS 420
           LCELSFQKTRHLRNPYNENLPVK                                   IS
Sbjct: 361 LCELSFQKTRHLRNPYNENLPVK-----------------------------------IS 420

Query: 421 RDCQELEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGSENPDIVPFE 480
           RDCQELEPSIGEQLASLLYLEPDGELMAVS+AAESKREEEKAKGVNPDIG+ENPDIVPFE
Sbjct: 421 RDCQELEPSIGEQLASLLYLEPDGELMAVSIAAESKREEEKAKGVNPDIGNENPDIVPFE 480

Query: 481 DNEEEEEEESEEEEEESFGQSVGLPPQGRGRGRGIMWPPHMPMGRGAARPFHGMQGFPPG 540
           DNEEEEEEESEEEEEESFGQSVGLP QGRGRGRGIMWPPHMPMGRG ARPFHGMQ FPPG
Sbjct: 481 DNEEEEEEESEEEEEESFGQSVGLPAQGRGRGRGIMWPPHMPMGRG-ARPFHGMQSFPPG 540

Query: 541 MMGTDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPTAMMFRGRPSQPGAV 600
           MMG DGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPP+AMMFRGRPSQPGA+
Sbjct: 541 MMGPDGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPSAMMFRGRPSQPGAM 600

Query: 601 FPPGGFGMMIGQGRGPFMGGMGVTGTNPARPGRPVGVPPLYPPPAVPSPQNMNRAIKRDQ 660
           F PGGFGMM+GQGRGPFMGGMGVTGT+PARPGRPVGV PLYPPPAVPS QN+NRAIKRDQ
Sbjct: 601 FTPGGFGMMMGQGRGPFMGGMGVTGTSPARPGRPVGVSPLYPPPAVPSAQNINRAIKRDQ 660

Query: 661 RGPASDRNDRYIVGLDQNKGPEMPNSGRDDEMQYKQGSKAYSDEQYGIGATFRNEESESE 720
           RGP SDRNDRYIVG DQNKG EM +SG D+ MQYKQGSKAY DEQYG+G TFRNEESESE
Sbjct: 661 RGPTSDRNDRYIVGPDQNKGQEMLSSGHDEGMQYKQGSKAYPDEQYGMGTTFRNEESESE 710

Query: 721 DEAPRRSRHGEGKKKRRGDSEGDATAISNQ 746
           DEAPRRSRHGEGKKKRRG SEGDATAIS+Q
Sbjct: 721 DEAPRRSRHGEGKKKRRG-SEGDATAISDQ 710

[Close]

BLAST of CmUC08G144150 vs. TAIR 10
Match: AT1G30460.1 (cleavage and polyadenylation specificity factor 30 )

HSP 1 Score: 761.5 bits (1965), Expect = 6.2e-220
Identity = 443/734 (60.35%), Postives = 501/734 (68.26%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPLIHSDSSAPPAASAVSNSLSGALGPAVSAE 60
           MED++G LSFDFEGGLD+GP     T+S+P+      APP      NS S A+  A + +
Sbjct: 1   MEDADG-LSFDFEGGLDSGPVQ--NTASVPV------APP-----ENSSSAAVNVAPTYD 60

Query: 61  PPGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120
              A     G  RSFRQTVCRHWLR LCMKGDACGFLHQ+DK+RMPICRFFRLYGECREQ
Sbjct: 61  HSSATVAGAGRGRSFRQTVCRHWLRGLCMKGDACGFLHQFDKARMPICRFFRLYGECREQ 120

Query: 121 DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSYNYGPS 180
           DCVYKHTNEDIKECNMYK GFCPNGPDCRYRHAKLPGPPPPVEE+LQKIQ L +YNYG +
Sbjct: 121 DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLTTYNYG-T 180

Query: 181 NKFFSQRGVGLSQQNEKAQFPQGPAIVAQGVTGKPSAAESANVQQQQGQQSAQQTSQTPV 240
           N+ +  R V    Q+     PQG       + G+P   ES N+QQQQ QQ  QQ+     
Sbjct: 181 NRLYQARNVAPQLQDR----PQGQV----PMQGQPQ--ESGNLQQQQ-QQQPQQSQHQVS 240

Query: 241 QSLSNGQPNQLNKTGTSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 300
           Q+L     +Q N+T   LPQG++RYF+VKS NREN ELSVQQGVWATQRSNEAKLNEAFD
Sbjct: 241 QTLIPNPADQTNRTSHPLPQGVNRYFVVKSNNRENFELSVQQGVWATQRSNEAKLNEAFD 300

Query: 301 SADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAHYGQNFSLKWLKLCELS 360
           S +NVILIFSVNRTRHFQGCAKM SRIGG + GGNWK+ HGTA YG+NFS+KWLKLCELS
Sbjct: 301 SVENVILIFSVNRTRHFQGCAKMTSRIGGYIGGGNWKHEHGTAQYGRNFSVKWLKLCELS 360

Query: 361 FQKTRHLRNPYNENLPVKRTYPHHPCLQGFLLFLTYCIVPCFTVTLTSYFFGLISRDCQE 420
           F KTR+LRNPYNENLPVK                                   ISRDCQE
Sbjct: 361 FHKTRNLRNPYNENLPVK-----------------------------------ISRDCQE 420

Query: 421 LEPSIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGSENPDIVPFEDNEEE 480
           LEPS+GEQLASLLYLEPD ELMA+S+AAE+KREEEKAKGVNP+  +ENPDIVPFEDNEEE
Sbjct: 421 LEPSVGEQLASLLYLEPDSELMAISIAAEAKREEEKAKGVNPESRAENPDIVPFEDNEEE 480

Query: 481 EEEESEEEEEESFGQSVGLPPQGRGRGRGIMWPPHMPMGRGAARPFHGMQGFPPGMMGT- 540
           EEEE E EEEE   +S+   PQGRGRGRGIMWPP MP+GRG  RP  GM GFP G+MG  
Sbjct: 481 EEEEDESEEEE---ESMAGGPQGRGRGRGIMWPPQMPLGRG-IRPMPGMGGFPLGVMGPG 540

Query: 541 DGLSYGPVTPDGFPMPDIFGMAPRGFGPYGPRFSGDFMGPPTAMMFRGRPSQPGAVFPPG 600
           D   YGP   +G  MPD FGM PR FGPYGPRF GDF GP   MMF GRP Q    FP G
Sbjct: 541 DAFPYGPGGYNG--MPDPFGMGPRPFGPYGPRFGGDFRGPVPGMMFPGRPPQQ---FPHG 600

Query: 601 GFGMMIGQGRGPFMGGMGVTGTNPARPGRPVGVPPLYPPPAVPSPQNMNRAIKRDQRGPA 660
           G+GMM G GRGP MGGMG    N  R GRP+  PP     A P P N     + D+RG +
Sbjct: 601 GYGMM-GGGRGPHMGGMG----NAPRGGRPMYYPPA-TSSARPGPSNRKTPERSDERGVS 631

Query: 661 SDRNDRYIVGLDQNKGPEMPNSGRDDEMQYKQGSKAYSDEQYGIGATFRNEESES--EDE 720
            D+ ++                             ++  EQ+ +G + RNEESES  EDE
Sbjct: 661 GDQQNQ---------------------------DASHDMEQFEVGNSLRNEESESEDEDE 631

Query: 721 APRRSRHGEGKKKR 732
           APRRSRHGEGKK+R
Sbjct: 721 APRRSRHGEGKKRR 631

[Close]

BLAST of CmUC08G144150 vs. TAIR 10
Match: AT1G30460.2 (cleavage and polyadenylation specificity factor 30 )

HSP 1 Score: 283.5 bits (724), Expect = 4.9e-76
Identity = 157/264 (59.47%), Postives = 183/264 (69.32%), Query Frame = 0


Query: 1   MEDSEGVLSFDFEGGLDAGPTNPAATSSLPLIHSDSSAPPAASAVSNSLSGALGPAVSAE 60
           MED++G LSFDFEGGLD+GP     T+S+P+      APP      NS S A+  A + +
Sbjct: 1   MEDADG-LSFDFEGGLDSGPVQ--NTASVPV------APP-----ENSSSAAVNVAPTYD 60

Query: 61  PPGAPTGNVGNRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQ 120
              A     G  RSFRQTVCRHWLR LCMKGDACGFLHQ+DK+RMPICRFFRLYGECREQ
Sbjct: 61  HSSATVAGAGRGRSFRQTVCRHWLRGLCMKGDACGFLHQFDKARMPICRFFRLYGECREQ 120

Query: 121 DCVYKHTNEDIKECNMYKFGFCPNGPDCRYRHAKLPGPPPPVEEILQKIQHLGSYNYGPS 180
           DCVYKHTNEDIKECNMYK GFCPNGPDCRYRHAKLPGPPPPVEE+LQKIQ L +YNYG +
Sbjct: 121 DCVYKHTNEDIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLTTYNYG-T 180

Query: 181 NKFFSQRGVGLSQQNEKAQFPQGPAIVAQGVTGKPSAAESANVQQQQGQQSAQQTSQTPV 240
           N+ +  R V    Q+     PQG       + G+P   ES N+QQQQ QQ  QQ+     
Sbjct: 181 NRLYQARNVAPQLQDR----PQGQV----PMQGQPQ--ESGNLQQQQ-QQQPQQSQHQVS 238

Query: 241 QSLSNGQPNQLNKTGTSLPQGISR 265
           Q+L     +Q N+T   LPQG++R
Sbjct: 241 QTLIPNPADQTNRTSHPLPQGVNR 238

[Close]

BLAST of CmUC08G144150 vs. TAIR 10
Match: AT4G11970.1 (YTH family protein )

HSP 1 Score: 115.9 bits (289), Expect = 1.4e-25
Identity = 83/227 (36.56%), Postives = 110/227 (48.46%), Query Frame = 0


Query: 248 PNQLNK---TGTSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSADN 307
           P+QL        S P   +RYFI+KS N +N+++SV++G+WATQ  NE  L  AF  +  
Sbjct: 54  PDQLESAKANKNSKPGYRTRYFIIKSLNYDNIQVSVEKGIWATQVMNEPILEGAFHKSGR 113

Query: 308 VILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAH-YGQNFSLKWLKLCELSFQK 367
           VILIFSVN +  FQG A+M+S +G       W    G  + +G++F +KWL+L EL FQK
Sbjct: 114 VILIFSVNMSGFFQGYAEMLSPVGWR-RDQIWSQGGGKNNPWGRSFKVKWLRLSELPFQK 173

Query: 368 TRHLRNPYNENLPVKRTYPHHPCLQGFLLFLTYCIVPCFTVTLTSYFFGLISRDCQELEP 427
           T HL+NP N+  PVK                                   ISRDCQEL  
Sbjct: 174 TLHLKNPLNDYKPVK-----------------------------------ISRDCQELPE 233

Query: 428 SIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGSENPD 471
            IGE L  LL    D       L   S R++   K    +  S + D
Sbjct: 234 DIGEALCELL----DANSCDDGLLNSSSRDDYSTKRSRAEPPSSSGD 240

[Close]

BLAST of CmUC08G144150 vs. TAIR 10
Match: AT4G11970.2 (YTH family protein )

HSP 1 Score: 115.9 bits (289), Expect = 1.4e-25
Identity = 83/227 (36.56%), Postives = 110/227 (48.46%), Query Frame = 0


Query: 248 PNQLNK---TGTSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSADN 307
           P+QL        S P   +RYFI+KS N +N+++SV++G+WATQ  NE  L  AF  +  
Sbjct: 54  PDQLESAKANKNSKPGYRTRYFIIKSLNYDNIQVSVEKGIWATQVMNEPILEGAFHKSGR 113

Query: 308 VILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAH-YGQNFSLKWLKLCELSFQK 367
           VILIFSVN +  FQG A+M+S +G       W    G  + +G++F +KWL+L EL FQK
Sbjct: 114 VILIFSVNMSGFFQGYAEMLSPVGWR-RDQIWSQGGGKNNPWGRSFKVKWLRLSELPFQK 173

Query: 368 TRHLRNPYNENLPVKRTYPHHPCLQGFLLFLTYCIVPCFTVTLTSYFFGLISRDCQELEP 427
           T HL+NP N+  PVK                                   ISRDCQEL  
Sbjct: 174 TLHLKNPLNDYKPVK-----------------------------------ISRDCQELPE 233

Query: 428 SIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGSENPD 471
            IGE L  LL    D       L   S R++   K    +  S + D
Sbjct: 234 DIGEALCELL----DANSCDDGLLNSSSRDDYSTKRSRAEPPSSSGD 240

[Close]

BLAST of CmUC08G144150 vs. TAIR 10
Match: AT4G11970.3 (YTH family protein )

HSP 1 Score: 115.9 bits (289), Expect = 1.4e-25
Identity = 83/227 (36.56%), Postives = 110/227 (48.46%), Query Frame = 0


Query: 248 PNQLNK---TGTSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFDSADN 307
           P+QL        S P   +RYFI+KS N +N+++SV++G+WATQ  NE  L  AF  +  
Sbjct: 54  PDQLESAKANKNSKPGYRTRYFIIKSLNYDNIQVSVEKGIWATQVMNEPILEGAFHKSGR 113

Query: 308 VILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTAH-YGQNFSLKWLKLCELSFQK 367
           VILIFSVN +  FQG A+M+S +G       W    G  + +G++F +KWL+L EL FQK
Sbjct: 114 VILIFSVNMSGFFQGYAEMLSPVGWR-RDQIWSQGGGKNNPWGRSFKVKWLRLSELPFQK 173

Query: 368 TRHLRNPYNENLPVKRTYPHHPCLQGFLLFLTYCIVPCFTVTLTSYFFGLISRDCQELEP 427
           T HL+NP N+  PVK                                   ISRDCQEL  
Sbjct: 174 TLHLKNPLNDYKPVK-----------------------------------ISRDCQELPE 233

Query: 428 SIGEQLASLLYLEPDGELMAVSLAAESKREEEKAKGVNPDIGSENPD 471
            IGE L  LL    D       L   S R++   K    +  S + D
Sbjct: 234 DIGEALCELL----DANSCDDGLLNSSSRDDYSTKRSRAEPPSSSGD 240

The following BLAST results are available for this feature:

BLAST of CmUC08G144150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889902.1	0.0e+00	91.15	30-kDa cleavage and polyadenylation specificity factor 30-like [Benincasa hispid...	[more]
XP_008459517.1	0.0e+00	89.57	PREDICTED: 30-kDa cleavage and polyadenylation specificity factor 30-like [Cucum...	[more]
XP_004141524.1	0.0e+00	88.76	30-kDa cleavage and polyadenylation specificity factor 30 [Cucumis sativus] >KGN...	[more]
KAA0039343.1	0.0e+00	87.65	30-kDa cleavage and polyadenylation specificity factor 30-like [Cucumis melo var...	[more]
XP_038894441.1	0.0e+00	86.90	30-kDa cleavage and polyadenylation specificity factor 30-like [Benincasa hispid...	[more]

BLAST of CmUC08G144150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A9LNK9	8.7e-219	60.35	30-kDa cleavage and polyadenylation specificity factor 30 OS=Arabidopsis thalian...	[more]
Q0DA50	1.4e-200	55.80	Zinc finger CCCH domain-containing protein 45 OS=Oryza sativa subsp. japonica OX...	[more]
Q5R746	4.4e-21	35.29	3'-5' RNA helicase YTHDC2 OS=Pongo abelii OX=9601 GN=YTHDC2 PE=2 SV=2	[more]
Q9H6S0	1.3e-20	35.29	3'-5' RNA helicase YTHDC2 OS=Homo sapiens OX=9606 GN=YTHDC2 PE=1 SV=2	[more]
B2RR83	1.3e-20	34.07	3'-5' RNA helicase YTHDC2 OS=Mus musculus OX=10090 GN=Ythdc2 PE=1 SV=1	[more]

BLAST of CmUC08G144150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CAV8	0.0e+00	89.57	30-kDa cleavage and polyadenylation specificity factor 30-like OS=Cucumis melo O...	[more]
A0A0A0KSR6	0.0e+00	88.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G647360 PE=4 SV=1	[more]
A0A5A7T8Q5	0.0e+00	87.65	30-kDa cleavage and polyadenylation specificity factor 30-like OS=Cucumis melo v...	[more]
A0A6J1CE78	0.0e+00	87.52	30-kDa cleavage and polyadenylation specificity factor 30 OS=Momordica charantia...	[more]
A0A5D3C2W1	0.0e+00	86.80	30-kDa cleavage and polyadenylation specificity factor 30 OS=Cucumis melo var. m...	[more]

BLAST of CmUC08G144150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30460.1	6.2e-220	60.35	cleavage and polyadenylation specificity factor 30	[more]
AT1G30460.2	4.9e-76	59.47	cleavage and polyadenylation specificity factor 30	[more]
AT4G11970.1	1.4e-25	36.56	YTH family protein	[more]
AT4G11970.2	1.4e-25	36.56	YTH family protein	[more]
AT4G11970.3	1.4e-25	36.56	YTH family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 471..491
None	No IPR available	GENE3D	4.10.1000.10		coord: 68..132 e-value: 1.4E-15 score: 59.0
None	No IPR available	GENE3D	3.10.590.10	ph1033 like domains	coord: 217..436 e-value: 1.4E-47 score: 163.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 678..692
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 709..737
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 472..493
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 11..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 627..644
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 450..511
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 215..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 617..745
None	No IPR available	PANTHER	PTHR12357	YTH YT521-B HOMOLOGY DOMAIN-CONTAINING	coord: 1..378 coord: 414..741
None	No IPR available	PANTHER	PTHR12357:SF106	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45	coord: 1..378
None	No IPR available	PANTHER	PTHR12357:SF106	ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45	coord: 414..741
IPR000571	Zinc finger, CCCH-type	SMART	SM00356	c3hfinal6	coord: 74..100 e-value: 3.5E-4 score: 29.9 coord: 130..154 e-value: 0.052 score: 22.7 coord: 102..128 e-value: 0.051 score: 22.7
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 128..155 score: 12.089031
IPR000571	Zinc finger, CCCH-type	PROSITE	PS50103	ZF_C3H1	coord: 74..101 score: 12.83077
IPR007275	YTH domain	PFAM	PF04146	YTH	coord: 263..379 e-value: 8.1E-35 score: 120.6
IPR007275	YTH domain	PROSITE	PS50882	YTH	coord: 263..398 score: 47.23122
IPR036855	Zinc finger, CCCH-type superfamily	SUPERFAMILY	90229	CCCH zinc finger	coord: 74..104

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC08G144150.1	CmUC08G144150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000381	regulation of alternative mRNA splicing, via spliceosome
cellular_component	GO:0005654	nucleoplasm
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:1990247	N6-methyladenosine-containing RNA binding
molecular_function	GO:0003723	RNA binding