CmUC08G143570 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC08G143570
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Mediator of RNA polymerase II transcription subunit 17
Location	CmU531Chr08: 1833499 .. 1845313 (-)
RNA-Seq Expression	CmUC08G143570
Synteny	CmUC08G143570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAATTTCAGGGACAAATTCGTCACTTCAGTTTTCTGCAGTCATCGGCTGAGCCCTCTGCCAGCGAACTTTCATCCCGATCGCGGACTTGTCTTCCATTCTAGGGCTCCCTCCAAACCTTTTCAATCCCGACATTATTCCGGTACAATACTGTGTGAATATGGACGAAGACATGAAAGTCTCTCTCGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATAGAAGAGAGCGGTCTAGAACGATTTCCATCGTATGTTCCTTCTTCCCGGGGTTTTCCCTCATTTTTTTGATTCCTGAGATAACAGAGGAAACATTATCTAGTTCGTATGTGTGTTAAGGTAGAAGAAGAAATGTCTTAGTTGATGAATGTCTGCTTGTCCTTCGACATTGTTAATTCTGATTACGTTTGTGTCTGTAAGTTGGCGATTGCTTGGAGTGAACTCACAATTGATCCCATTCTGCTAAATTGACCAGAATCTAATCTTTAAATGTGTTCCTTGATTTTTCCTGGTGAAAGTTTATGCTTAATTTCCTTGATTAATTGAGATTGATTGTGTTATATTGTTAACAGAGATGTTGGTTATGAAGAGAAACGGTTGTCACTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACACCGTGGCAATGGCAGAACATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTTATCAACACTGTGAGTTTATATATCAAACGCCTCTAAGTTTCTAGATTTTTTTACCATACTGTTCTTTTTATAAATAATGGGAAAACGTTACTTGTATTAGTTTCAATCAATAAATGTGCCTGCAAATATTTCTTTGTTCTAAAGAAAAAAAGGTGCATGCAAATGTAGAGGCAAGTTGTTTTAGATTTTACATTACATATATGTCTTGGCATATTTTTATTTTTTTAGAAAGCGTGGTACTGAAGTGCAATAGTTCTTTCGGACTTAAGTGCAAGGTGCAGTAAAGAGAGGGGAAAAAAACAAGGTGCTCACTGGAAAATGCTAATAATTTTCTTTACACATGAAGTAAAATAGTATTATGAATATTAAGATAATGAAAAATTGAAATTAGAGGTTTTATTGGTGATTGTTGAAAAAAAACAAACATTATAAAAGAATATTTCTTAGTTTCTTCCTTCTATTGGGCTTCAGGCACTGAAGCGCGTATCTCAAGTGCCCTTCATTAAGGGTGCCTTTTCTGGTAAGTCCATGTAGGTGTAGTTTTCTAAACACAGTGTCTATGTGCAGAGGATTTGTGAACCTACAAACTGATCTTTAATTCTTATTAGCTTTATGGATATACAGCAACAATGTGTCTGACAAAATCATCTTGTTGACTTGAGTTTCCTTATCCTAAGCTCTCTGTAAATAATGACATTTACTTCATCTCTCTGTTAGGCCCCCAATTCACCTTACATACAAGAGGAGGGGCAATAAAGGGAATTCACAGGAGCAGAGGAAGGGAGAGCATGAGGGTTGTTATTTGGGGAAATGTGGGGACCATCTGTACAAGGGTTGTGGGGTTAAGTAGGGTTTTGGGTCTCCAGCTGAGGGTGTGGAATATTTTGAGGTTAAGCCTAGAGGGAGGAGAGAACCAGCACTCTGTAATTTGCTGGAAGTTATTTTGCTTGTTATTTCCTTTCGGTTTAGTATCTTCTTGTTGAGACCTAGGATTTATCTCCTTATTTGTGAATATATAATACAAAAATATCGTAATACCCTGTCTTTCTTGGTATCTTGTTGGGTATTGTTCTTGTTTGCAAGTGTGGATACCTAACAAATTGGTATCAGAGCTCGGTTCAACACTAAGGATCACAAGAAGAATGGCGTAGAAGATGACAAAAGAACGTTTTGAAGCTCAGGAAAAGGAGCTAGCAGTTCTGAAGGAACTAGTGGTGACTACCTGTCGTAATGTTGAGAGGATGTCGAGCAATTTAAGGGAGTTGTCAGATCGAGTGAGTAAGGGGCAGACACTGTTGACGGAGGCCTCATAGACGAAGAACAAGGAAGTCGAAATGGAAGAAGGTGAGTCCTCTCAAGCTAAGAACGGGGGATCGATCGGAGCAAATACAAAAAGTTGGAGATACTGATCTTTGACGGAGAAGGTCCGGATTTGTGGCTTTTCTGAGCAGAGACGTATTTCGAAATACACGAACTCTCCGATGTAGAGAAGATGAAGGTGTCGGTGATTAGCTTTTCTCAGGAGGTTATCGATTGGTATCACTGGACTCACAACAGGAGACCGATCAATACATGGAACGAGTTGAAAGAAAGAATGTTCGAACGGTGAAGACCCACGATAGAGGGGACTCTCACTAATCAGCTTATGACCATTAAGCAAGAAGGAACCTACGCTGATTATTGAAAGAAATTTGAAGTTTACTCAGCTCCACTTCCAAATATGGAGGAGAGCGTGTTGGTGACGGTGTTCTTCAATGGACTACGGCCGACATTGAAGGCAGTCGTGGTGAGTCAGTGGCCAATGGGCCATGATTAATGTATGTTGGAAGCCCAATCCATTGATGATAAAGATTTAGCCATGAAACTAGCCCTCAAGGAAGTGGGCCATAGTGGGCCAGATAAGAAAGGGGGGAGGCCCAAGGAATGGGAGGAAAATATTTGGGAACAGTGGAGCTGGTGCCCTAAATCAGCAAGTTACCGTTCTTGGGAAGGGAAACCCAAGTTGAAAGAAGGATCCACTGATGAGACGAATGTTCGATGCTGAATTCAAGGAGAAGAGGGACAAGGGATTATGCTTCCGTTGTGATGAGAGATATTTCCAAGGCCACCGTTGCAAAATAAAAGAAAAGAGAGAGCTGAATTTGATTATAGCAGGCGAAGAAGGCGATTGTGAAGAAATGAATTGCGAGGAGGAGGTACCGGAAGTGGAAACTAAGGCCTTAGAAGTGGCGGACAATGTAGAGTTGGCCTTAAGATCGATTTATGGATTTTTGGCTCCGAGAATGATGAAATTAAAAGGGATTGTGGTAGGAAACGAGATGATTGTACTCATCGATTGCGGGGCGACCCACAACTTCATACATCAGAGACTCGCAGAGGAACTTAAATTACAGGTGGTTGAAACTTCGAATTACAGGATTGTGGTCGGGAATGGAACAACGATCAAAGTCTAGGGAATTTGCCAATCAATAATAGTCATGTTACCGGAGATTACTGTTGAGGACTTCTTACCGTTGGACTTGGGAAAAATGGATGTTATACTCGAAATGGCGTGACTCTGTACCACGGGCTTCATGGGGGTGCATTGGCCGTCATTGACAATGACCTTCGCCTTCAGAGACAACCAAGTGATGTTAAGAGGGGATCCCTCACTGACGAAGGCAGAAGTTAGCCTAAAGGTAATGACTAAGACATGGGAGGCAGAGGACCAAGGATTTCTTATTGAGTTTCAGAATATGGAAATTGAAGAAGAGGAAGAAGGAAACTCAGAGGAAAGGAATCGAGAGATAGAACAGCTTTTGGTGATGATCCAAACCTTATTAGGACGCAACCAAGACATTTTTGAGCTTTTGAAGGTACTCCCACCTAAGAGAGAGGTTGATCATAAAATTGTCATGGCAGAGGGGCAACCACCTATCAAAGTACGACCATACAAATATGGGCACGCTCAGAAGGATGAAATTGAAAGATTGGTGTGAGAAATGTTAGCAACTGGGATCATACGACCAAGTAGTTCTTTCTCAAGTCCAGTATTATTGGTAAGGAAGAAAGATGGAGGTTGGAGGTTCTGCGTGGATTATCAAAAGATAAATCAGGCCATGATCACTGACAAATTTCCAATTCTCGTTATTGAAGAATTGTTGGATGAATTACACGGAGCAAGTGTGTTTTCAAACTTGGATCTGTGATCAGGATACCATCAGATCCGAATGGATGGACGAGACATTCCCAAGACAGCTTTTGAACCCATGAGGGTCATTCCAAGTTCTTAGTCATGTCATTTGGGTTGATCAATGCCCTGCCAACGTTTTCGTCACGGAAGCTATGGTGTTGACAGTCTCGACACTAGTCGATATTGAGGTAGTTCAGCAAGAAGTGGAAAAGGATGAGTCATTGCAGAAAATCATTGAAAGACTTAAGGAAGGATCCAGATTCAGTACCTAAATTCTCACTTAACCATGGAAAGCTATTATACAAAATCCGGTTAGTCATATCTCACACTTCTTCCTTGATTCTTGCACTTTTGAGTACATTCCATGATTCAGGGATAGGAGGGTGCAAAGGTAGGGCTACCTTCACACCTATAAACGAATGACGGGGGAGTTGTATTGAAAGGGATGAAGAAAGACGTTAAAAAATATGTTGAGAGTTTCATCATCTGTCAAAAGAATAAAGTGGATTCAATTACCCTAGTAGGGCTATTACAACCGCTACCAGTACCAGATAGAGTTTGGGGAGACATCACCATGGATTTCGTGGAAGGATTGCCGAAATCTCAAGGGAAGGATGCGATTATGGTAGTGGTTGATAGGCTCAGCAAATATGGACACTTTGTGTCATTGAGCCATCCTTACAACGCCAAGCTAGTTGCCATTATGTTCATTCGAGAAGTGGTGAAACTTCATGGGTTCCTGAAGTCAATCATATCGGATTGAGATAAAATCTTCCTTAGTAACTTCTGGATTGAGTTATTTAAGAGTCAAGGAACTGTCCTGAAGAGGAGTACTGCCTTTCATCCACAGACCGACGGACAAACTGAACGGGTTAATAGGTGTTTGGAAACATACCTTCGGTGCTTTTGTAATGAACAGCCTAAGGCTTGATATGACGGGTTACCATGGGCGGAATATTGGTATAATACAACATACCATGTCTCAACCAACACCACTCCTTATAATATTGTGTATGGAATTGCAATGCCTCCTCTGATATCTTACGGGGAAACAAGGTGTCTAATGACACGGTAGAGCAACAACTAATGGCACGAGACAAGGGTTTGGTGGCTCTTAAGGAGCATCTGACCCTGGCACAGAATCGAATGAAGAAATTTTACGACATGAAATGGCGGGCAGTTGAATTTGAGGTTGGAATTGAAGTCTTTTTGAAACTAAGACCCTACAGACAATGAACACTAGCAAAGAAACATTGTGAGAAGCTATCTCTGAGGTTTTATGGACCTTATCCTGTGTTGGAAAGGATCGGGGAGGTAGCCTCTACCTTCTTCAAGTTCCACATGAGGCAACCATTCACAATGTTTTCCATGTTTCCCAATTGAAGAAGAAGGTGGGGGAGAGGTAGACGGTCCAAGTACACTCCCCTCAATTTTCGGAAGAATTTGAGTTGCAGGTCCGACCAAAAAATATACTCAGCGTCAGATGGAACTTGGAACTGAGTAGAGAGGAATGGCTGATCACATGGGAGAAGCTGCCAGAAAGTGAAGTGACTTGGTAAGAGGCTGCTTTCATCAAGTATTAATTTTCAAAATTACACCTTGAGGACAAGGTGCATCTAGAGACCAGGGGTATTGTTAGGCCCCCAATTCACCATACATACCAGAGGAGGGGCAAGAAAGGGAATTCACAGGAGCATGAGGGTCGTTATTTGGGGAAATGTGGGGACCATCCGTCCAGGGGTCATAGGGGTTAAGTAGGGTTTTGGGTCTCTAGCTGGGGGTGTGGTATATTTTGGGGTTAAGCCTAGAGGGAGGAGAGAACCAGCACTCTGTATATTTTTTATGCTTTATTTTCTTTTTCATTCTTTCTCGCAAGAATTGGTTGGGAGAACTGGGTTCTGTCAGGTTCATTAGGGAGGAGATAGGATTAAACTGCTAATTGTCAGGATCTAGAAATTGTGATATTTTTTCTCTGCTTGTTGTACTAGATTAGTTTTAATAAACTGGTATCTTGAGAATATTCTTTTTAGAAATATGGTGCCATTACAAATATTGTCTTTGTCTTGATATGACTGTAGGTGGAAGCTAATGATGCAGTAACAGTAGCTGGGATGACAAGGCCAAAACCGTTACCTAATGAAGTTTTGTCAGATCTTGGAGTGTCTGTCGCAACGAAATTACAATGCTTTCGAGTACTATTTTTATCCTTCTTTTGTTTTCAGAAGTGATGCTTGGCTTTTACGCCCTTATTGTCTTATCTGATTAGCTTACTTTGATTGGGCTGGCACGACCATGTTGTAAAGATTAATTACCAGTATTATTCAATTCAAATTTGATCTTATTATTTGTACTATCATTTTGAAAGTGCCTGATTTTATCATTTACACCTTTCTTTCTACAGCATCTTGGTAAATATTTCAAGCAGTCAGCTAAAGGTTTGGAACGACAGGTTGCAAGGGAAGCAAGATTTTATGGTGCTTTAATTCGGTAATCAATTCTCTTCATTTATCCAACGAATCATTGTGCAATTAATGTATACTCAAAATTGTATGTCATTGTGAATCTGGCAGTGCGTAGACAGTAATATTCTTTAGAATCCATGAAGTGTCCTTGAATTAAAAAGTTTTTATCATAAAATATAAATATGCTTTGATTTTTATTCACATGTGTTTATCAATTTAGATAAAATAGAAGTTTTTGTTAAGAAAACTTAGGAGGCATTTGGGGTGCTGAGTTGGTTATTATAGTTAGTAGTTATTATAGTTAATGGATTATAATAGTCTGTGGATTATAATAGTTTCTGTTTGGTGTGTAAACTATTTTAGTCTAAGTTATAATAGTTTGTGGTTGGGGTGCAAATTGTTTTGTTTGGATAGAAAATAGTAAACGCTGTAGCAAAAAAGAAAAGAAAGGATGAGTGGAAAATAGTTAATATTGTAGCAAAGAGGGTTTTGAAATAGTATTTACTATACTTAATTGTAGGTTATAAATAGTTGTAAACACCACTATTATATTGGGTACCCCAAACATGGAGTGGGCTATAACAACCCACTCACCAACTTCTTGTTGGTGCCCCAAACTCCTTAGTTTATGCCCCCATATGTTATACTATTTGTTTATTTATTTTAGGAAATGTAACTTTCATTGAAGGGCATTCAAAGAAGAAGCCCACAAAGGAATTCCATCACTAACTACAAGAAATAATTCCAATTTAAAAGAACTAAACCAAGCTGATAATAATTACAAAAAGTTGATGGATGAACACCCATAATGAAGCATTAAAAGTGACAACCTCCCAAACCCCTCCTCCCAAGATCTCTCCACTCCTATAAAAATCATACTTTTGCTCTCTAGTCAAAATACCTACAGAACAGCATAAAAACAAGCATGCCACATGACTTTCTCTTATCTAAGAAAGAAGAGTTCGGGAGCACCTTCTTAATCATAGAGCAAGAATTTTTTCTTTGAACTTTGCGAAGAACAAAAGAACTCAAGCACCGACTCCAGAGAGCGTAAACAAATTGGCAAGCCAACAATAAATGATTGTTGTCCTCTTGCTGCCAACAAAAAACACATGGTTGCGGATGCAACATAAAAGAATGATGTCTATGAATACAATCCGGGGTGTTAACTCTCCCATGCATCACCAACTAAGCAAAGAACTTCACTTTTTCGGGAATTTTAATCTTCTGAAGAGTGTAGAAAGCATAGGCAACTTGTGGGAGGAGGAAGTGAAACGCACAATGGGAAAAAATTATCTACAAGAAAATTCCTAAGAAGGATTAGGGCCCAAACCTGAAAGTTGGAGGAGTTCCTCTTCCTCCTAGGACATGCAAGGACGATAAAAGAAGAGAAAATGCCTAAGAAGGGTCGGTCTGGAATGATAGAACGAAGGTTTGCCACTTTTGTTGCCTCTTGGAAAGGATGACGAAAACCCAAAAGGAAGGGGAGAGCTCAGATAGTCAAAATGGAGGCCATTGAGCACATACTCTAATTGGACAGCTAATGTAAATGTGGAAAGTTGGAAACAGAGAACAAAAGACCCTGCAACATGCAACCCACTACTCAAAAGGGTGCAGACCATACCTATGCACAATAGTCCTATACCACAAAGAGATAGGCTCCATGAAGCCTCATATGTTATACTAACAGATTCATCGTATAAATTATCCAATCTAGGTATTAATTGCCACAATGAAATCTATATTTGCGTTCAGGGCATAACTGCAAAGTTGTCCTTTTCAGATCATAAGGTGGATAGCAGCAAAAAAAGATGGTAATTTTCTTAAGGGCATGAAAGTAACCCTTATTCAATCAGTTCTTTCCAATAATTGTCGTGTTCTTTTTGCCATAACCGAAAAGCTCATGAGAGACTTCTCATGGATGGGTGTGTGAGCAGTGAGCACTGAGAATGAGTCTTTTCATCTAAGTGGAGCATGGTGTTGTGTTTGTATGAGAGTGGCAGATTGGGAATCGGTAATGGCTGACCAATAACCTTGCTCTAATTAAGTGGCTTTGAACTCTGGAGGTTCTGTTGGTAGCAATCTACTTTAGTGCATAAGATTATTGCAATTAGATTTGGGGTTTAATCAACTAGTGGATTCCCATCTAGGCTTCATTAATCTCGCACCGTGGTTCTAGAAGGCCATTTCCATTGCATAGGCTTCTGTTTTTAGTTGTTGAGCTTCTTCACAAACTCAAAAGGGTAAGATTGTAGATAAAGATAATCAGTTTACTTTTCACTAAATCGATTGCTTCCTTGAAGGAGGTGATTTTCTACGTTGTGTGGGCTTGTGAAAGTTAGATTATTGGCCAGTTGGGACTCTTGTCATATTGTGTTTGAATGTAGTAGGGGATCTTTTAAGTTATATTGCTTCTTAACTGAGGCTGCTTTCAGTATAATTCCACTTGAGGCTTCCAGCTTGCCAATTCATTATCAGGCATATACCTTAATATTTTTTTATAATTGGAAGTTTTTTTCCTTTAATTTTGTGGGGATGGTGGCTTGAGAGTAGTAGAATTTTTAGACAGGTTGAGAGATCTTCAGAAGAGGTGTGGAGGTTGTGAGGTTTAATGCTTCTTTATGTGCGTCTGTTAATAAGCGTTTTAATTCCCATTTTGTGGGGTTTTTTTTTTTTTTTTTTTGTATGTCTTTGTGCATTACTGACTCCGCTTAAGAAAATAAAACTGTAAGGGTGGTTGCTCCAGTTTTCCCTTTGTATAGCTTTTGTTTAGCCTGCTAACATTGTTTTTTATGGTGCTTCTTCCTAGCCCCCTGCCACTTTATAAGTTGCACCTTCTCATATTATTTTTTAAATTTTTTTTTTTCATGGTTCCTTCTTTTCCTCTTTCTTTTTCTAATAACATCTCGTTCCTTATTAAAAATAAAACAACCTTTGGATTTTCTGAGGTTTAGCCTTCTTAATATCATGAGCTTGTTTTTTAATTCTTTCATATTGTTTCGTTTAAAAAAGTAAAATTTCCACCATTTGAATTTAGTATCTTTTTTACTTTTGGGTTTAACTTATTTAGCATCGAATGATCCATAAATACAAGTATATATTAATGTATTATAGTGCAATTTATATAGAAACAATTGGAAACCTTTTGATGCTCTTAATGCTTTCCAATCTTCATATATTTTCAGTATTTGCTGATGATGTATATCAGATTGCAGCAAAATTGGAAGGTTAAAAGGCAGCGAGTGGCTGCTCCAGCTCCTGCAAATGAAGGCTTTACCATTGATTTATTTGACAATTCATCGTGTGATCCTTCGTCTGTGTTTCGACCATCTTCATCTACTATTCGTGTTGATCATGATTCGTCTGGAATGCTGGCAATTAATTTGCCTCCAAATTCATGTCATTCCCTTCGTTTTGGATTTCTCAGTGGATGTAATGTGGAAAATCCTCTGGATCGTGGTAAAAATGAGTCTACAAATTCTTCCAATCAGTCTTCAATGAACAGGGAGAAGGAATTTACAAATGACGATGAGTACATTAAGGAAACAAACTCACTTCTCCGTCAAGTTCACCATGCCATTTTCAGTGAGCAGGTAGTTTCTTTAATACTTTGATCTTGCTCATTATAAGTCCTTGCTACTTTTGTTCCCCACCACATGATACACCATTGTTTTTTCCTGGTTCCAGGTGTTTGATTTGGTGAATCGTGAAGCATTCAATCCATCCTTAGGTATCAACGTGACTGGCATACGAGAAAATTACTTGCAATTAAGTATAGATCAGGGTACCTCGGTCTTTATCTCTCTTGTGCCATCTGGTCAACATTGCCAAACAGTTGAAGGTGTAAATACCGGGATTCTGGATAATGCAAATTTACCTTTTGATTCCCTTGATGAGATTGAATTACCAGATAGAAGTGATCCCCTTGAAAAGAAATTGCGGAATCCTAATCATATAACCTTTGAGATATATCTGCAACAAATTTTCCATGAGCTAGTATTTATAAAATCAAATGATAGACCCATTTCATCATTAAGCAGGCAATCAGGTCAAGGTTCTAATGATGGGTCTGGACTTCTTGGTCATTTCTGTTTGTCTCTGGCTCACAGAATGTTTGCAAACAATGTTCTCATGGAGCTCGAAAATGTGGTAAAGTCCTAATTTCTTAATAACTCAATTTCCAATGAAAGCACACTGCTTCATAATTTTTTAAGGAAAAAAAAACTACAATAATTATGATTTATGTATTTGGTGTTACCAGCATATTAATCTTGTAGATCTTTGGTTTGTTCTTAGGTTTGGAAAGTCCCATTTCTTCAGTTGATATCTCATCCCACTTGGAATTCTCGAAAATCATCATGGACGTTTTCTATGGAAGTTCCTTGGTCCATACTTCATCCTAATAGCATCCAGGCTCGTACATCAGACAGTCATCAGATGAATAATGTCACCAAAACACAATTTCTGACTAAAGTGGTTGTAAATGATGATTGCATTACTATCGAAGGGGAAGGTGCACCTAATGTTGTTGGCTTGTTCAACGGAAATTCCAAGGATATCCATTCAATGAACAGATATGGTTGTGACTTGGCTGATCTTCCCGTTATAATTCTGTTGCAGGTGAGTTCATAGTAGATTTCCATGCTTTCAAGCTTCTTTATCAGTGGAAAGTAACAGTAATAGTATCCTTGTGTTTACATAACAGGTTGCGAGCCAAATTATTCTTTGGCTTCATGAGGAAGCTCTAACCTGGGGAATAAAGGCCAACCGTGATTTCCTAAGTCTGTCATTTGAGCTAGAACAAGGTGAAACACTCCGTCTGGTAGCCCATGTGGACCCAGAAGATCCTCAAGGATGCCTTTCTTGGTGGTTGGTAATGGACGATGGTTTGATGGAGGACAGGAAACTTAATTTTGACAGTTCAGATGTTGTGCCTGAATACAGGAAGTTTTTGGGCCATTTATCTCTAGAAGTTTTGCATTCAACACTAATGGATTTGGTTAGTTTGTGCAGTGGAGTTGGTGGTAGCTTATAACCATGCCTTTCTTGTCTGGTATTACAAATAGAAATTGCATTGAGTTCTTGTAATTTCTGCCTCTAGATTTTCAAATCTAATGATATCTTCAGTTTTTGTCCGCATTGCTTACTCAACTTCATATATTATTTATATAACTATGCAAAAATAGTAAATGTAGGGCCATGGATGGTTGGAAGCTGACTTCAAGATGAAGAAACCGTTTAGCGAGGCTTTGTTTTGGTAACCATTTAGTTTTTTTTTTATTCACTTGGTTATTATGCTTTGTGTCTTTTCAAAAAACTATTTCAGAAACTTATTTTCTTTTGGTAAAAGTACTCTTTTAGTCCCTAAGTTTTTAAGATGTGGATTTGGTCTGTAATGTTTTAAATTGTCCATTTTAGTCC

mRNA sequence

AAAAATTTCAGGGACAAATTCGTCACTTCAGTTTTCTGCAGTCATCGGCTGAGCCCTCTGCCAGCGAACTTTCATCCCGATCGCGGACTTGTCTTCCATTCTAGGGCTCCCTCCAAACCTTTTCAATCCCGACATTATTCCGGTACAATACTGTGTGAATATGGACGAAGACATGAAAGTCTCTCTCGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATAGAAGAGAGCGGTCTAGAACGATTTCCATCAGATGTTGGTTATGAAGAGAAACGGTTGTCACTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACACCGTGGCAATGGCAGAACATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTTATCAACACTGCACTGAAGCGCGTATCTCAAGTGCCCTTCATTAAGGGTGCCTTTTCTGGACGCAACCAAGACATTTTTGAGCTTTTGAAGGTGGAAGCTAATGATGCAGTAACAGTAGCTGGGATGACAAGGCCAAAACCGTTACCTAATGAAGTTTTGTCAGATCTTGGAGTGTCTGTCGCAACGAAATTACAATGCTTTCGACATCTTGGTAAATATTTCAAGCAGTCAGCTAAAGGTTTGGAACGACAGGTTGCAAGGGAAGCAAGATTTTATGGTGCTTTAATTCGATTGCAGCAAAATTGGAAGGTTAAAAGGCAGCGAGTGGCTGCTCCAGCTCCTGCAAATGAAGGCTTTACCATTGATTTATTTGACAATTCATCGTGTGATCCTTCGTCTGTGTTTCGACCATCTTCATCTACTATTCGTGTTGATCATGATTCGTCTGGAATGCTGGCAATTAATTTGCCTCCAAATTCATGTCATTCCCTTCGTTTTGGATTTCTCAGTGGATGTAATGTGGAAAATCCTCTGGATCGTGGTAAAAATGAGTCTACAAATTCTTCCAATCAGTCTTCAATGAACAGGGAGAAGGAATTTACAAATGACGATGAGTACATTAAGGAAACAAACTCACTTCTCCGTCAAGTTCACCATGCCATTTTCAGTGAGCAGGTGTTTGATTTGGTGAATCGTGAAGCATTCAATCCATCCTTAGGTATCAACGTGACTGGCATACGAGAAAATTACTTGCAATTAAGTATAGATCAGGGTACCTCGGTCTTTATCTCTCTTGTGCCATCTGGTCAACATTGCCAAACAGTTGAAGGTGTAAATACCGGGATTCTGGATAATGCAAATTTACCTTTTGATTCCCTTGATGAGATTGAATTACCAGATAGAAGTGATCCCCTTGAAAAGAAATTGCGGAATCCTAATCATATAACCTTTGAGATATATCTGCAACAAATTTTCCATGAGCTAGTATTTATAAAATCAAATGATAGACCCATTTCATCATTAAGCAGGCAATCAGGTCAAGGTTCTAATGATGGGTCTGGACTTCTTGGTCATTTCTGTTTGTCTCTGGCTCACAGAATGTTTGCAAACAATGTTCTCATGGAGCTCGAAAATGTGGTTTGGAAAGTCCCATTTCTTCAGTTGATATCTCATCCCACTTGGAATTCTCGAAAATCATCATGGACGTTTTCTATGGAAGTTCCTTGGTCCATACTTCATCCTAATAGCATCCAGGCTCGTACATCAGACAGTCATCAGATGAATAATGTCACCAAAACACAATTTCTGACTAAAGTGGTTGTAAATGATGATTGCATTACTATCGAAGGGGAAGGTGCACCTAATGTTGTTGGCTTGTTCAACGGAAATTCCAAGGATATCCATTCAATGAACAGATATGGTTGTGACTTGGCTGATCTTCCCGTTATAATTCTGTTGCAGGTTGCGAGCCAAATTATTCTTTGGCTTCATGAGGAAGCTCTAACCTGGGGAATAAAGGCCAACCGTGATTTCCTAAGTCTGTCATTTGAGCTAGAACAAGGTGAAACACTCCGTCTGGTAGCCCATGTGGACCCAGAAGATCCTCAAGGATGCCTTTCTTGGTGGTTGGTAATGGACGATGGTTTGATGGAGGACAGGAAACTTAATTTTGACAGTTCAGATGTTGTGCCTGAATACAGGAAGTTTTTGGGCCATTTATCTCTAGAAGTTTTGCATTCAACACTAATGGATTTGGTTAGTTTGTGCAGTGGAGTTGGTGGTAGCTTATAACCATGCCTTTCTTGTCTGGTATTACAAATAGAAATTGCATTGAGTTCTTGTAATTTCTGCCTCTAGATTTTCAAATCTAATGATATCTTCAGTTTTTGTCCGCATTGCTTACTCAACTTCATATATTATTTATATAACTATGCAAAAATAGTAAATGTAGGGCCATGGATGGTTGGAAGCTGACTTCAAGATGAAGAAACCGTTTAGCGAGGCTTTGTTTTGGTAACCATTTAGTTTTTTTTTTATTCACTTGGTTATTATGCTTTGTGTCTTTTCAAAAAACTATTTCAGAAACTTATTTTCTTTTGGTAAAAGTACTCTTTTAGTCCCTAAGTTTTTAAGATGTGGATTTGGTCTGTAATGTTTTAAATTGTCCATTTTAGTCC

Coding sequence (CDS)

ATGGACGAAGACATGAAAGTCTCTCTCGACAAGCTTCCCGTCAAGCGCTTGGAGGCCATAGAAGAGAGCGGTCTAGAACGATTTCCATCAGATGTTGGTTATGAAGAGAAACGGTTGTCACTTATTCGGAGAATTGACTTTGCTTGGGCAATAGAGAAGGACGATGACAAAAAGAAGCAGAAGAAGAGCTCCAAGGAGAGTTCAACACCGTGGCAATGGCAGAACATGATAGAAAACTTGCAGTTGGCTCATCAAGAGCTCTCTGTTATCATAGACCTTATCAACACTGCACTGAAGCGCGTATCTCAAGTGCCCTTCATTAAGGGTGCCTTTTCTGGACGCAACCAAGACATTTTTGAGCTTTTGAAGGTGGAAGCTAATGATGCAGTAACAGTAGCTGGGATGACAAGGCCAAAACCGTTACCTAATGAAGTTTTGTCAGATCTTGGAGTGTCTGTCGCAACGAAATTACAATGCTTTCGACATCTTGGTAAATATTTCAAGCAGTCAGCTAAAGGTTTGGAACGACAGGTTGCAAGGGAAGCAAGATTTTATGGTGCTTTAATTCGATTGCAGCAAAATTGGAAGGTTAAAAGGCAGCGAGTGGCTGCTCCAGCTCCTGCAAATGAAGGCTTTACCATTGATTTATTTGACAATTCATCGTGTGATCCTTCGTCTGTGTTTCGACCATCTTCATCTACTATTCGTGTTGATCATGATTCGTCTGGAATGCTGGCAATTAATTTGCCTCCAAATTCATGTCATTCCCTTCGTTTTGGATTTCTCAGTGGATGTAATGTGGAAAATCCTCTGGATCGTGGTAAAAATGAGTCTACAAATTCTTCCAATCAGTCTTCAATGAACAGGGAGAAGGAATTTACAAATGACGATGAGTACATTAAGGAAACAAACTCACTTCTCCGTCAAGTTCACCATGCCATTTTCAGTGAGCAGGTGTTTGATTTGGTGAATCGTGAAGCATTCAATCCATCCTTAGGTATCAACGTGACTGGCATACGAGAAAATTACTTGCAATTAAGTATAGATCAGGGTACCTCGGTCTTTATCTCTCTTGTGCCATCTGGTCAACATTGCCAAACAGTTGAAGGTGTAAATACCGGGATTCTGGATAATGCAAATTTACCTTTTGATTCCCTTGATGAGATTGAATTACCAGATAGAAGTGATCCCCTTGAAAAGAAATTGCGGAATCCTAATCATATAACCTTTGAGATATATCTGCAACAAATTTTCCATGAGCTAGTATTTATAAAATCAAATGATAGACCCATTTCATCATTAAGCAGGCAATCAGGTCAAGGTTCTAATGATGGGTCTGGACTTCTTGGTCATTTCTGTTTGTCTCTGGCTCACAGAATGTTTGCAAACAATGTTCTCATGGAGCTCGAAAATGTGGTTTGGAAAGTCCCATTTCTTCAGTTGATATCTCATCCCACTTGGAATTCTCGAAAATCATCATGGACGTTTTCTATGGAAGTTCCTTGGTCCATACTTCATCCTAATAGCATCCAGGCTCGTACATCAGACAGTCATCAGATGAATAATGTCACCAAAACACAATTTCTGACTAAAGTGGTTGTAAATGATGATTGCATTACTATCGAAGGGGAAGGTGCACCTAATGTTGTTGGCTTGTTCAACGGAAATTCCAAGGATATCCATTCAATGAACAGATATGGTTGTGACTTGGCTGATCTTCCCGTTATAATTCTGTTGCAGGTTGCGAGCCAAATTATTCTTTGGCTTCATGAGGAAGCTCTAACCTGGGGAATAAAGGCCAACCGTGATTTCCTAAGTCTGTCATTTGAGCTAGAACAAGGTGAAACACTCCGTCTGGTAGCCCATGTGGACCCAGAAGATCCTCAAGGATGCCTTTCTTGGTGGTTGGTAATGGACGATGGTTTGATGGAGGACAGGAAACTTAATTTTGACAGTTCAGATGTTGTGCCTGAATACAGGAAGTTTTTGGGCCATTTATCTCTAGAAGTTTTGCATTCAACACTAATGGATTTGGTTAGTTTGTGCAGTGGAGTTGGTGGTAGCTTATAA

Protein sequence

MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKRVSQVPFIKGAFSGRNQDIFELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYIKETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEKKLRNPNHITFEIYLQQIFHELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQLISHPTWNSRKSSWTFSMEVPWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYRKFLGHLSLEVLHSTLMDLVSLCSGVGGSL

Homology

[Close]

BLAST of CmUC08G143570 vs. NCBI nr
Match: XP_038889914.1 (mediator of RNA polymerase II transcription subunit 17 [Benincasa hispida] >XP_038889915.1 mediator of RNA polymerase II transcription subunit 17 [Benincasa hispida] >XP_038889916.1 mediator of RNA polymerase II transcription subunit 17 [Benincasa hispida] >XP_038889917.1 mediator of RNA polymerase II transcription subunit 17 [Benincasa hispida] >XP_038889918.1 mediator of RNA polymerase II transcription subunit 17 [Benincasa hispida])

HSP 1 Score: 1258.4 bits (3255), Expect = 0.0e+00
Identity = 633/689 (91.87%), Postives = 649/689 (94.19%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MDEDMKVSLDKLPVKRLEAIEE+GLERFP DVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ
Sbjct: 1   MDEDMKVSLDKLPVKRLEAIEETGLERFPLDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60

Query: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKRVSQVPFIKGAFSGRNQDIFE 120
           KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINT                        
Sbjct: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINT------------------------ 120

Query: 121 LLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR 180
              VEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQ+AR
Sbjct: 121 ---VEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQIAR 180

Query: 181 EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHD 240
           EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRV+HD
Sbjct: 181 EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVEHD 240

Query: 241 SSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI 300
           SSGMLAINLPPNSCHSLRFGFLSGCNVENPL+RGKNESTNSSNQSS+NREKEFTNDDEYI
Sbjct: 241 SSGMLAINLPPNSCHSLRFGFLSGCNVENPLERGKNESTNSSNQSSINREKEFTNDDEYI 300

Query: 301 KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVP 360
           KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSV ISLVP
Sbjct: 301 KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVLISLVP 360

Query: 361 SGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEKKLRNPNHITFEIYLQQIFHE 420
           SGQ CQTVEG NTGILDNANLPFDSLD IELPDRSDP EKKLRNPNHITFEIYLQQIFHE
Sbjct: 361 SGQSCQTVEGANTGILDNANLPFDSLDGIELPDRSDPFEKKLRNPNHITFEIYLQQIFHE 420

Query: 421 LVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQ 480
           LVF++SNDRP S+LSRQSGQ +NDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQ
Sbjct: 421 LVFVRSNDRP-SALSRQSGQAANDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQ 480

Query: 481 LISHPTWNSRKSSWTFSMEVPWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCIT 540
           LISHPTWNSRKSSWTF MEVP SILHPNSIQA TSD+HQMNN+TK+QFLTKVVVNDDCIT
Sbjct: 481 LISHPTWNSRKSSWTFFMEVPRSILHPNSIQAHTSDNHQMNNITKSQFLTKVVVNDDCIT 540

Query: 541 IEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA 600
           IEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA
Sbjct: 541 IEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA 600

Query: 601 NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYR 660
           NRDFLSLSFELEQGE LRLVAHVDP+DPQGCLSWWLVMDDGLMED+KL+FDSSDV+PEYR
Sbjct: 601 NRDFLSLSFELEQGEILRLVAHVDPDDPQGCLSWWLVMDDGLMEDKKLHFDSSDVIPEYR 660

Query: 661 KFLGHLSLEVLHSTLMDLVSLCSGVGGSL 690
           KFLGHLSLEVLHSTLMDLVSLCSGVG SL
Sbjct: 661 KFLGHLSLEVLHSTLMDLVSLCSGVGSSL 661

[Close]

BLAST of CmUC08G143570 vs. NCBI nr
Match: XP_011656092.1 (mediator of RNA polymerase II transcription subunit 17 [Cucumis sativus] >XP_011656093.1 mediator of RNA polymerase II transcription subunit 17 [Cucumis sativus] >KGN52676.1 hypothetical protein Csa_008469 [Cucumis sativus])

HSP 1 Score: 1255.0 bits (3246), Expect = 0.0e+00
Identity = 633/689 (91.87%), Postives = 649/689 (94.19%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MDEDMKVSLDKLPVKRLEAIEE+GLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ
Sbjct: 1   MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60

Query: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKRVSQVPFIKGAFSGRNQDIFE 120
           KKSSKESSTPWQWQ+MIENLQLAHQELSVIIDLINT                        
Sbjct: 61  KKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINT------------------------ 120

Query: 121 LLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR 180
              VEANDAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR
Sbjct: 121 ---VEANDAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR 180

Query: 181 EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHD 240
           EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHD
Sbjct: 181 EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHD 240

Query: 241 SSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI 300
           SSGMLAINLPPNSCHSLRFGFLSGCNVENPL+R KNESTN SNQSS+NREKEFTNDDEYI
Sbjct: 241 SSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYI 300

Query: 301 KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVP 360
           KETNSLLRQVHHAIFSEQVFDLVN+EAFNPS+GINVTGIRENYLQLSIDQGTSVFISLVP
Sbjct: 301 KETNSLLRQVHHAIFSEQVFDLVNQEAFNPSVGINVTGIRENYLQLSIDQGTSVFISLVP 360

Query: 361 SGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEKKLRNPNHITFEIYLQQIFHE 420
           SGQ  QTVEG N+ IL+NA+LPFDSLD IELPDRSDPLEKKLRNPNHITFEIYLQQIFHE
Sbjct: 361 SGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHE 420

Query: 421 LVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQ 480
           LVF+KSNDRPISSLSRQSGQ SNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQ
Sbjct: 421 LVFVKSNDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQ 480

Query: 481 LISHPTWNSRKSSWTFSMEVPWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCIT 540
           LISHPTWNSRKSSWTF MEVPWSILHPNSI+ARTSD +QMNNVTKTQFLTKVVVNDDCIT
Sbjct: 481 LISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQFLTKVVVNDDCIT 540

Query: 541 IEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA 600
           IEGEGAPNVVGLFNGNSKDI+S NRY CDLADLPVIILLQVASQIILWLHEEAL WGIKA
Sbjct: 541 IEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKA 600

Query: 601 NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYR 660
           NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNF++SDVVPEYR
Sbjct: 601 NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYR 660

Query: 661 KFLGHLSLEVLHSTLMDLVSLCSGVGGSL 690
           KFLGHLSLEVLHSTLMDLVSLCSGVGGSL
Sbjct: 661 KFLGHLSLEVLHSTLMDLVSLCSGVGGSL 662

[Close]

BLAST of CmUC08G143570 vs. NCBI nr
Match: XP_008459609.1 (PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Cucumis melo] >XP_016902444.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Cucumis melo] >XP_016902445.1 PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Cucumis melo] >TYK00455.1 mediator of RNA polymerase II transcription subunit 17 [Cucumis melo var. makuwa])

HSP 1 Score: 1245.0 bits (3220), Expect = 0.0e+00
Identity = 627/689 (91.00%), Postives = 646/689 (93.76%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MDED+KVSLDKLP+KRLEAIEE+GLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQ
Sbjct: 1   MDEDLKVSLDKLPIKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQ 60

Query: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKRVSQVPFIKGAFSGRNQDIFE 120
           KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINT                        
Sbjct: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINT------------------------ 120

Query: 121 LLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR 180
              VEANDAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR
Sbjct: 121 ---VEANDAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR 180

Query: 181 EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHD 240
           EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHD
Sbjct: 181 EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHD 240

Query: 241 SSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI 300
           SSGMLAINLPPNSCHSLRFGFLSGCNVENPL+  KN++TN SNQ+S+ REKEFTNDDEYI
Sbjct: 241 SSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYI 300

Query: 301 KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVP 360
           KETNSLLRQVHHAIF EQVFDLVN EAFNPS+GINVTGIRENYLQLSIDQGTSVFISLVP
Sbjct: 301 KETNSLLRQVHHAIFCEQVFDLVNHEAFNPSVGINVTGIRENYLQLSIDQGTSVFISLVP 360

Query: 361 SGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEKKLRNPNHITFEIYLQQIFHE 420
           SGQ CQTVEG N+ ILDNANLPFDSLD IELPDRSDPLEKKLRNPNHITFEIYLQQIFHE
Sbjct: 361 SGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHE 420

Query: 421 LVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQ 480
           LVF+KSNDRPISSLSRQSGQ SNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQ
Sbjct: 421 LVFVKSNDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQ 480

Query: 481 LISHPTWNSRKSSWTFSMEVPWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCIT 540
           LISHPTWNSRKSSWTF MEVP SILHPNSIQARTSDS+QMNNVTKTQFLTKVVVNDDCIT
Sbjct: 481 LISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQFLTKVVVNDDCIT 540

Query: 541 IEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA 600
           IEGEGAPNVVGLFNGNSKDI+  NRY CDLADLPVIILLQVASQIILWLHEEALTWGIKA
Sbjct: 541 IEGEGAPNVVGLFNGNSKDIYLTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKA 600

Query: 601 NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYR 660
           NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNF++SDVVPEYR
Sbjct: 601 NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYR 660

Query: 661 KFLGHLSLEVLHSTLMDLVSLCSGVGGSL 690
           KFLG+LSLEVLHSTLMDLVSLCSGVGGSL
Sbjct: 661 KFLGNLSLEVLHSTLMDLVSLCSGVGGSL 662

[Close]

BLAST of CmUC08G143570 vs. NCBI nr
Match: KAA0039269.1 (mediator of RNA polymerase II transcription subunit 17 [Cucumis melo var. makuwa])

HSP 1 Score: 1240.3 bits (3208), Expect = 0.0e+00
Identity = 627/690 (90.87%), Postives = 646/690 (93.62%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MDED+KVSLDKLP+KRLEAIEE+GLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQ
Sbjct: 1   MDEDLKVSLDKLPIKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQ 60

Query: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKRVSQVPFIKGAFSGRNQDIFE 120
           KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINT                        
Sbjct: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINT------------------------ 120

Query: 121 LLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR 180
              VEANDAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR
Sbjct: 121 ---VEANDAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR 180

Query: 181 EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHD 240
           EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHD
Sbjct: 181 EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHD 240

Query: 241 SSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI 300
           SSGMLAINLPPNSCHSLRFGFLSGCNVENPL+  KN++TN SNQ+S+ REKEFTNDDEYI
Sbjct: 241 SSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYI 300

Query: 301 KETNSLLRQVHHAIFSEQ-VFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLV 360
           KETNSLLRQVHHAIF EQ VFDLVN EAFNPS+GINVTGIRENYLQLSIDQGTSVFISLV
Sbjct: 301 KETNSLLRQVHHAIFCEQVVFDLVNHEAFNPSVGINVTGIRENYLQLSIDQGTSVFISLV 360

Query: 361 PSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEKKLRNPNHITFEIYLQQIFH 420
           PSGQ CQTVEG N+ ILDNANLPFDSLD IELPDRSDPLEKKLRNPNHITFEIYLQQIFH
Sbjct: 361 PSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFH 420

Query: 421 ELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFL 480
           ELVF+KSNDRPISSLSRQSGQ SNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFL
Sbjct: 421 ELVFVKSNDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFL 480

Query: 481 QLISHPTWNSRKSSWTFSMEVPWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCI 540
           QLISHPTWNSRKSSWTF MEVP SILHPNSIQARTSDS+QMNNVTKTQFLTKVVVNDDCI
Sbjct: 481 QLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQFLTKVVVNDDCI 540

Query: 541 TIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIK 600
           TIEGEGAPNVVGLFNGNSKDI+  NRY CDLADLPVIILLQVASQIILWLHEEALTWGIK
Sbjct: 541 TIEGEGAPNVVGLFNGNSKDIYLTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIK 600

Query: 601 ANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEY 660
           ANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNF++SDVVPEY
Sbjct: 601 ANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEY 660

Query: 661 RKFLGHLSLEVLHSTLMDLVSLCSGVGGSL 690
           RKFLG+LSLEVLHSTLMDLVSLCSGVGGSL
Sbjct: 661 RKFLGNLSLEVLHSTLMDLVSLCSGVGGSL 663

[Close]

BLAST of CmUC08G143570 vs. NCBI nr
Match: XP_022987637.1 (mediator of RNA polymerase II transcription subunit 17-like [Cucurbita maxima])

HSP 1 Score: 1208.4 bits (3125), Expect = 0.0e+00
Identity = 612/689 (88.82%), Postives = 634/689 (92.02%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MD DMKVSLDKLPVKRLEAIEE+GLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ
Sbjct: 1   MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60

Query: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKRVSQVPFIKGAFSGRNQDIFE 120
           KK+SKES+TPWQWQ+MIENLQLAHQELSVIIDLINT                        
Sbjct: 61  KKTSKESATPWQWQSMIENLQLAHQELSVIIDLINT------------------------ 120

Query: 121 LLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR 180
              VEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR
Sbjct: 121 ---VEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR 180

Query: 181 EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHD 240
           EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDN SCDPSSVFRPSSSTIRVD D
Sbjct: 181 EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSVFRPSSSTIRVDRD 240

Query: 241 SSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI 300
           SSGMLAI+LPPN+CHSL FGFLSGCN+ENPL+RGKNESTNSSNQS +  EKEFTNDDEYI
Sbjct: 241 SSGMLAISLPPNTCHSLCFGFLSGCNMENPLERGKNESTNSSNQSPIESEKEFTNDDEYI 300

Query: 301 KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVP 360
           KETNSLLRQVHHAIFSEQVFD VNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVP
Sbjct: 301 KETNSLLRQVHHAIFSEQVFDFVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVP 360

Query: 361 SGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEKKLRNPNHITFEIYLQQIFHE 420
           +GQ CQTVE  NTGILDN NLPFDSLD IELPDRSDPLEKKLRNPN+ TFEIYLQQIFHE
Sbjct: 361 TGQSCQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHE 420

Query: 421 LVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQ 480
           LVF+KSND+PISSLSRQSGQ SNDGSGLLGHFCLSLAHR+FAN VLMELENVVWKVPFLQ
Sbjct: 421 LVFVKSNDKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQ 480

Query: 481 LISHPTWNSRKSSWTFSMEVPWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCIT 540
           LISHPTWNSRKSSWTF MEVP S LHP SIQARTSDSH+MN+VTK+QF TKVVVNDDCIT
Sbjct: 481 LISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHKMNSVTKSQFQTKVVVNDDCIT 540

Query: 541 IEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA 600
           IEGEGAP+VVGLF GNSKD++SMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIK 
Sbjct: 541 IEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKV 600

Query: 601 NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYR 660
           +RDFLSLSFELEQGETLRLVAHVDPED QGCLSWWLVMDDGLMEDRK NF+ SDVVPEYR
Sbjct: 601 SRDFLSLSFELEQGETLRLVAHVDPEDAQGCLSWWLVMDDGLMEDRKHNFNISDVVPEYR 660

Query: 661 KFLGHLSLEVLHSTLMDLVSLCSGVGGSL 690
           KFLGHLSLEVL STLMDLVSLCSG GGSL
Sbjct: 661 KFLGHLSLEVLQSTLMDLVSLCSGFGGSL 662

[Close]

BLAST of CmUC08G143570 vs. ExPASy Swiss-Prot
Match: F4K460 (Mediator of RNA polymerase II transcription subunit 17 OS=Arabidopsis thaliana OX=3702 GN=MED17 PE=1 SV=1)

HSP 1 Score: 722.6 bits (1864), Expect = 4.1e-207
Identity = 385/686 (56.12%), Postives = 499/686 (72.74%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KK 60
           MD DM++SLD+LP+KRLE+IEE+G ERFPSDV Y++KR+SLIRRIDFAWA+E++D+  KK
Sbjct: 1   MDSDMEISLDRLPIKRLESIEENGAERFPSDVDYDDKRVSLIRRIDFAWALEEEDELKKK 60

Query: 61  KQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKRVSQVPFIKGAFSGRNQDI 120
           KQKKSSK+S   W+W+ M+ENLQLAHQEL+VIIDLI+T                      
Sbjct: 61  KQKKSSKDSVEQWKWKGMVENLQLAHQELTVIIDLIDT---------------------- 120

Query: 121 FELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQV 180
                V+ANDAVTVAGMTRPKP+PNE+LSDL VS ATKLQ +R+LG YFKQSAK LE+++
Sbjct: 121 -----VQANDAVTVAGMTRPKPMPNEILSDLAVSTATKLQGYRNLGNYFKQSAKALEQKI 180

Query: 181 AREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSS-STIRV 240
            REARFYGALIRLQ+NWKVKRQR+ A   +NEGFTIDL D+S  DP+S FRPS+ STIRV
Sbjct: 181 NREARFYGALIRLQRNWKVKRQRMLASNASNEGFTIDLSDSSLYDPTSGFRPSTLSTIRV 240

Query: 241 DHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDD 300
           DHDS+GMLAIN+P +S +SLRFG++    + N  +  ++  + + +      EK   +DD
Sbjct: 241 DHDSAGMLAINVPQDSWYSLRFGYVGLNPIGNSNESDEHIDSTTGHDIPGTSEKLSASDD 300

Query: 301 EYIKETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFIS 360
           +Y+KET+SLLR+VH +IF+EQ+FD++NREAFN  +G N++G+REN++++SI QG S+F+S
Sbjct: 301 KYVKETHSLLREVHKSIFAEQLFDMLNREAFNEGVGFNISGLRENFMEMSIGQGASLFVS 360

Query: 361 LVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEKKLRNPNHITFEIYLQQI 420
           L PSG++    +       ++A L  +S   +E  +  D   KKL  PN  ++EIYLQQI
Sbjct: 361 LHPSGKNPSIKKS------ESATLLIESSGRVEPAEGGDYRLKKLGFPNRTSYEIYLQQI 420

Query: 421 FHELVFIKSNDRPISSLSRQSGQGSND-GSGLLGHFCLSLAHRMFANNVLMELENVVWKV 480
           FHE  F K+ D+  S   R S Q   D  SGLL HFCLSL HR+F+N VL+ LE+VV KV
Sbjct: 421 FHEHAFGKAKDQLKSKSIRASNQTEKDSNSGLLDHFCLSLTHRIFSNRVLVHLESVVCKV 480

Query: 481 PFLQLISHPTWNSRKSSWTFSMEVPWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVND 540
           P+L LISHPTWNSR SSWT  M VP SI+     + ++ D  +     KTQF TKVVV D
Sbjct: 481 PYLHLISHPTWNSRTSSWTVFMTVPPSIIPQGRSETQSPDGKRN---LKTQFRTKVVVKD 540

Query: 541 DCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTW 600
           DCI++E E  PNVVGL   +S ++ S+N+Y CD+ADLPV+IL QVASQI+ WL EEA T 
Sbjct: 541 DCISVEAECTPNVVGLLKSSSCNLFSINKYECDVADLPVMILQQVASQIVCWLLEEARTV 600

Query: 601 GIKANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVV 660
           G KA+R+FLSLS E+ +GE + LVAHV+PED +GC+SWWLVM++G  E+R       + V
Sbjct: 601 GTKASREFLSLSLEIVEGERVSLVAHVNPEDAKGCISWWLVMENGCTEER-------EGV 643

Query: 661 PEYRKFLGHLSLEVLHSTLMDLVSLC 683
            E RK LGHLSL+VL+S LMDL++LC
Sbjct: 661 SESRKLLGHLSLDVLYSVLMDLINLC 643

[Close]

BLAST of CmUC08G143570 vs. ExPASy TrEMBL
Match: A0A0A0KXX2 (Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis sativus OX=3659 GN=MED17 PE=3 SV=1)

HSP 1 Score: 1255.0 bits (3246), Expect = 0.0e+00
Identity = 633/689 (91.87%), Postives = 649/689 (94.19%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MDEDMKVSLDKLPVKRLEAIEE+GLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ
Sbjct: 1   MDEDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60

Query: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKRVSQVPFIKGAFSGRNQDIFE 120
           KKSSKESSTPWQWQ+MIENLQLAHQELSVIIDLINT                        
Sbjct: 61  KKSSKESSTPWQWQSMIENLQLAHQELSVIIDLINT------------------------ 120

Query: 121 LLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR 180
              VEANDAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR
Sbjct: 121 ---VEANDAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR 180

Query: 181 EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHD 240
           EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHD
Sbjct: 181 EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHD 240

Query: 241 SSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI 300
           SSGMLAINLPPNSCHSLRFGFLSGCNVENPL+R KNESTN SNQSS+NREKEFTNDDEYI
Sbjct: 241 SSGMLAINLPPNSCHSLRFGFLSGCNVENPLERDKNESTNPSNQSSVNREKEFTNDDEYI 300

Query: 301 KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVP 360
           KETNSLLRQVHHAIFSEQVFDLVN+EAFNPS+GINVTGIRENYLQLSIDQGTSVFISLVP
Sbjct: 301 KETNSLLRQVHHAIFSEQVFDLVNQEAFNPSVGINVTGIRENYLQLSIDQGTSVFISLVP 360

Query: 361 SGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEKKLRNPNHITFEIYLQQIFHE 420
           SGQ  QTVEG N+ IL+NA+LPFDSLD IELPDRSDPLEKKLRNPNHITFEIYLQQIFHE
Sbjct: 361 SGQSSQTVEGANSEILENASLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHE 420

Query: 421 LVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQ 480
           LVF+KSNDRPISSLSRQSGQ SNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQ
Sbjct: 421 LVFVKSNDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQ 480

Query: 481 LISHPTWNSRKSSWTFSMEVPWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCIT 540
           LISHPTWNSRKSSWTF MEVPWSILHPNSI+ARTSD +QMNNVTKTQFLTKVVVNDDCIT
Sbjct: 481 LISHPTWNSRKSSWTFFMEVPWSILHPNSIKARTSDGYQMNNVTKTQFLTKVVVNDDCIT 540

Query: 541 IEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA 600
           IEGEGAPNVVGLFNGNSKDI+S NRY CDLADLPVIILLQVASQIILWLHEEAL WGIKA
Sbjct: 541 IEGEGAPNVVGLFNGNSKDIYSTNRYSCDLADLPVIILLQVASQIILWLHEEALIWGIKA 600

Query: 601 NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYR 660
           NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNF++SDVVPEYR
Sbjct: 601 NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYR 660

Query: 661 KFLGHLSLEVLHSTLMDLVSLCSGVGGSL 690
           KFLGHLSLEVLHSTLMDLVSLCSGVGGSL
Sbjct: 661 KFLGHLSLEVLHSTLMDLVSLCSGVGGSL 662

[Close]

BLAST of CmUC08G143570 vs. ExPASy TrEMBL
Match: A0A1S4E2I2 (Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo OX=3656 GN=LOC103498687 PE=3 SV=1)

HSP 1 Score: 1245.0 bits (3220), Expect = 0.0e+00
Identity = 627/689 (91.00%), Postives = 646/689 (93.76%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MDED+KVSLDKLP+KRLEAIEE+GLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQ
Sbjct: 1   MDEDLKVSLDKLPIKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQ 60

Query: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKRVSQVPFIKGAFSGRNQDIFE 120
           KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINT                        
Sbjct: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINT------------------------ 120

Query: 121 LLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR 180
              VEANDAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR
Sbjct: 121 ---VEANDAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR 180

Query: 181 EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHD 240
           EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHD
Sbjct: 181 EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHD 240

Query: 241 SSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI 300
           SSGMLAINLPPNSCHSLRFGFLSGCNVENPL+  KN++TN SNQ+S+ REKEFTNDDEYI
Sbjct: 241 SSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYI 300

Query: 301 KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVP 360
           KETNSLLRQVHHAIF EQVFDLVN EAFNPS+GINVTGIRENYLQLSIDQGTSVFISLVP
Sbjct: 301 KETNSLLRQVHHAIFCEQVFDLVNHEAFNPSVGINVTGIRENYLQLSIDQGTSVFISLVP 360

Query: 361 SGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEKKLRNPNHITFEIYLQQIFHE 420
           SGQ CQTVEG N+ ILDNANLPFDSLD IELPDRSDPLEKKLRNPNHITFEIYLQQIFHE
Sbjct: 361 SGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHE 420

Query: 421 LVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQ 480
           LVF+KSNDRPISSLSRQSGQ SNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQ
Sbjct: 421 LVFVKSNDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQ 480

Query: 481 LISHPTWNSRKSSWTFSMEVPWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCIT 540
           LISHPTWNSRKSSWTF MEVP SILHPNSIQARTSDS+QMNNVTKTQFLTKVVVNDDCIT
Sbjct: 481 LISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQFLTKVVVNDDCIT 540

Query: 541 IEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA 600
           IEGEGAPNVVGLFNGNSKDI+  NRY CDLADLPVIILLQVASQIILWLHEEALTWGIKA
Sbjct: 541 IEGEGAPNVVGLFNGNSKDIYLTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKA 600

Query: 601 NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYR 660
           NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNF++SDVVPEYR
Sbjct: 601 NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYR 660

Query: 661 KFLGHLSLEVLHSTLMDLVSLCSGVGGSL 690
           KFLG+LSLEVLHSTLMDLVSLCSGVGGSL
Sbjct: 661 KFLGNLSLEVLHSTLMDLVSLCSGVGGSL 662

[Close]

BLAST of CmUC08G143570 vs. ExPASy TrEMBL
Match: A0A5D3BMZ9 (Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo var. makuwa OX=1194695 GN=MED17 PE=3 SV=1)

HSP 1 Score: 1245.0 bits (3220), Expect = 0.0e+00
Identity = 627/689 (91.00%), Postives = 646/689 (93.76%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MDED+KVSLDKLP+KRLEAIEE+GLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQ
Sbjct: 1   MDEDLKVSLDKLPIKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQ 60

Query: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKRVSQVPFIKGAFSGRNQDIFE 120
           KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINT                        
Sbjct: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINT------------------------ 120

Query: 121 LLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR 180
              VEANDAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR
Sbjct: 121 ---VEANDAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR 180

Query: 181 EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHD 240
           EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHD
Sbjct: 181 EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHD 240

Query: 241 SSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI 300
           SSGMLAINLPPNSCHSLRFGFLSGCNVENPL+  KN++TN SNQ+S+ REKEFTNDDEYI
Sbjct: 241 SSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYI 300

Query: 301 KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVP 360
           KETNSLLRQVHHAIF EQVFDLVN EAFNPS+GINVTGIRENYLQLSIDQGTSVFISLVP
Sbjct: 301 KETNSLLRQVHHAIFCEQVFDLVNHEAFNPSVGINVTGIRENYLQLSIDQGTSVFISLVP 360

Query: 361 SGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEKKLRNPNHITFEIYLQQIFHE 420
           SGQ CQTVEG N+ ILDNANLPFDSLD IELPDRSDPLEKKLRNPNHITFEIYLQQIFHE
Sbjct: 361 SGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFHE 420

Query: 421 LVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQ 480
           LVF+KSNDRPISSLSRQSGQ SNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQ
Sbjct: 421 LVFVKSNDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQ 480

Query: 481 LISHPTWNSRKSSWTFSMEVPWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCIT 540
           LISHPTWNSRKSSWTF MEVP SILHPNSIQARTSDS+QMNNVTKTQFLTKVVVNDDCIT
Sbjct: 481 LISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQFLTKVVVNDDCIT 540

Query: 541 IEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA 600
           IEGEGAPNVVGLFNGNSKDI+  NRY CDLADLPVIILLQVASQIILWLHEEALTWGIKA
Sbjct: 541 IEGEGAPNVVGLFNGNSKDIYLTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIKA 600

Query: 601 NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYR 660
           NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNF++SDVVPEYR
Sbjct: 601 NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEYR 660

Query: 661 KFLGHLSLEVLHSTLMDLVSLCSGVGGSL 690
           KFLG+LSLEVLHSTLMDLVSLCSGVGGSL
Sbjct: 661 KFLGNLSLEVLHSTLMDLVSLCSGVGGSL 662

[Close]

BLAST of CmUC08G143570 vs. ExPASy TrEMBL
Match: A0A5A7TDC1 (Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G00600 PE=3 SV=1)

HSP 1 Score: 1240.3 bits (3208), Expect = 0.0e+00
Identity = 627/690 (90.87%), Postives = 646/690 (93.62%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MDED+KVSLDKLP+KRLEAIEE+GLERFP+DVGYEEKRLSLIRRIDFAWAIEKDD+KKKQ
Sbjct: 1   MDEDLKVSLDKLPIKRLEAIEENGLERFPTDVGYEEKRLSLIRRIDFAWAIEKDDEKKKQ 60

Query: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKRVSQVPFIKGAFSGRNQDIFE 120
           KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINT                        
Sbjct: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINT------------------------ 120

Query: 121 LLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR 180
              VEANDAVTVAGMTRPKPLPNEVL+DLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR
Sbjct: 121 ---VEANDAVTVAGMTRPKPLPNEVLADLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR 180

Query: 181 EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHD 240
           EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHD
Sbjct: 181 EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHD 240

Query: 241 SSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI 300
           SSGMLAINLPPNSCHSLRFGFLSGCNVENPL+  KN++TN SNQ+S+ REKEFTNDDEYI
Sbjct: 241 SSGMLAINLPPNSCHSLRFGFLSGCNVENPLEHDKNDTTNPSNQTSVKREKEFTNDDEYI 300

Query: 301 KETNSLLRQVHHAIFSEQ-VFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLV 360
           KETNSLLRQVHHAIF EQ VFDLVN EAFNPS+GINVTGIRENYLQLSIDQGTSVFISLV
Sbjct: 301 KETNSLLRQVHHAIFCEQVVFDLVNHEAFNPSVGINVTGIRENYLQLSIDQGTSVFISLV 360

Query: 361 PSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEKKLRNPNHITFEIYLQQIFH 420
           PSGQ CQTVEG N+ ILDNANLPFDSLD IELPDRSDPLEKKLRNPNHITFEIYLQQIFH
Sbjct: 361 PSGQSCQTVEGANSEILDNANLPFDSLDGIELPDRSDPLEKKLRNPNHITFEIYLQQIFH 420

Query: 421 ELVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFL 480
           ELVF+KSNDRPISSLSRQSGQ SNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFL
Sbjct: 421 ELVFVKSNDRPISSLSRQSGQVSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFL 480

Query: 481 QLISHPTWNSRKSSWTFSMEVPWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCI 540
           QLISHPTWNSRKSSWTF MEVP SILHPNSIQARTSDS+QMNNVTKTQFLTKVVVNDDCI
Sbjct: 481 QLISHPTWNSRKSSWTFFMEVPRSILHPNSIQARTSDSYQMNNVTKTQFLTKVVVNDDCI 540

Query: 541 TIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIK 600
           TIEGEGAPNVVGLFNGNSKDI+  NRY CDLADLPVIILLQVASQIILWLHEEALTWGIK
Sbjct: 541 TIEGEGAPNVVGLFNGNSKDIYLTNRYSCDLADLPVIILLQVASQIILWLHEEALTWGIK 600

Query: 601 ANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEY 660
           ANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNF++SDVVPEY
Sbjct: 601 ANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFETSDVVPEY 660

Query: 661 RKFLGHLSLEVLHSTLMDLVSLCSGVGGSL 690
           RKFLG+LSLEVLHSTLMDLVSLCSGVGGSL
Sbjct: 661 RKFLGNLSLEVLHSTLMDLVSLCSGVGGSL 663

[Close]

BLAST of CmUC08G143570 vs. ExPASy TrEMBL
Match: A0A6J1JAW7 (Mediator of RNA polymerase II transcription subunit 17 OS=Cucurbita maxima OX=3661 GN=LOC111485135 PE=3 SV=1)

HSP 1 Score: 1208.4 bits (3125), Expect = 0.0e+00
Identity = 612/689 (88.82%), Postives = 634/689 (92.02%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60
           MD DMKVSLDKLPVKRLEAIEE+GLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ
Sbjct: 1   MDGDMKVSLDKLPVKRLEAIEENGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDDKKKQ 60

Query: 61  KKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKRVSQVPFIKGAFSGRNQDIFE 120
           KK+SKES+TPWQWQ+MIENLQLAHQELSVIIDLINT                        
Sbjct: 61  KKTSKESATPWQWQSMIENLQLAHQELSVIIDLINT------------------------ 120

Query: 121 LLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR 180
              VEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR
Sbjct: 121 ---VEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQVAR 180

Query: 181 EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSSSTIRVDHD 240
           EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDN SCDPSSVFRPSSSTIRVD D
Sbjct: 181 EARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNLSCDPSSVFRPSSSTIRVDRD 240

Query: 241 SSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDDEYI 300
           SSGMLAI+LPPN+CHSL FGFLSGCN+ENPL+RGKNESTNSSNQS +  EKEFTNDDEYI
Sbjct: 241 SSGMLAISLPPNTCHSLCFGFLSGCNMENPLERGKNESTNSSNQSPIESEKEFTNDDEYI 300

Query: 301 KETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVP 360
           KETNSLLRQVHHAIFSEQVFD VNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVP
Sbjct: 301 KETNSLLRQVHHAIFSEQVFDFVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFISLVP 360

Query: 361 SGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEKKLRNPNHITFEIYLQQIFHE 420
           +GQ CQTVE  NTGILDN NLPFDSLD IELPDRSDPLEKKLRNPN+ TFEIYLQQIFHE
Sbjct: 361 TGQSCQTVEDANTGILDNTNLPFDSLDGIELPDRSDPLEKKLRNPNYTTFEIYLQQIFHE 420

Query: 421 LVFIKSNDRPISSLSRQSGQGSNDGSGLLGHFCLSLAHRMFANNVLMELENVVWKVPFLQ 480
           LVF+KSND+PISSLSRQSGQ SNDGSGLLGHFCLSLAHR+FAN VLMELENVVWKVPFLQ
Sbjct: 421 LVFVKSNDKPISSLSRQSGQPSNDGSGLLGHFCLSLAHRIFANKVLMELENVVWKVPFLQ 480

Query: 481 LISHPTWNSRKSSWTFSMEVPWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVNDDCIT 540
           LISHPTWNSRKSSWTF MEVP S LHP SIQARTSDSH+MN+VTK+QF TKVVVNDDCIT
Sbjct: 481 LISHPTWNSRKSSWTFFMEVPQSKLHPPSIQARTSDSHKMNSVTKSQFQTKVVVNDDCIT 540

Query: 541 IEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKA 600
           IEGEGAP+VVGLF GNSKD++SMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIK 
Sbjct: 541 IEGEGAPDVVGLFKGNSKDMYSMNRYGCDLADLPVIILLQVASQIILWLHEEALTWGIKV 600

Query: 601 NRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVVPEYR 660
           +RDFLSLSFELEQGETLRLVAHVDPED QGCLSWWLVMDDGLMEDRK NF+ SDVVPEYR
Sbjct: 601 SRDFLSLSFELEQGETLRLVAHVDPEDAQGCLSWWLVMDDGLMEDRKHNFNISDVVPEYR 660

Query: 661 KFLGHLSLEVLHSTLMDLVSLCSGVGGSL 690
           KFLGHLSLEVL STLMDLVSLCSG GGSL
Sbjct: 661 KFLGHLSLEVLQSTLMDLVSLCSGFGGSL 662

[Close]

BLAST of CmUC08G143570 vs. TAIR 10
Match: AT5G20170.1 (RNA polymerase II transcription mediators )

HSP 1 Score: 722.6 bits (1864), Expect = 2.9e-208
Identity = 385/686 (56.12%), Postives = 499/686 (72.74%), Query Frame = 0


Query: 1   MDEDMKVSLDKLPVKRLEAIEESGLERFPSDVGYEEKRLSLIRRIDFAWAIEKDDD--KK 60
           MD DM++SLD+LP+KRLE+IEE+G ERFPSDV Y++KR+SLIRRIDFAWA+E++D+  KK
Sbjct: 1   MDSDMEISLDRLPIKRLESIEENGAERFPSDVDYDDKRVSLIRRIDFAWALEEEDELKKK 60

Query: 61  KQKKSSKESSTPWQWQNMIENLQLAHQELSVIIDLINTALKRVSQVPFIKGAFSGRNQDI 120
           KQKKSSK+S   W+W+ M+ENLQLAHQEL+VIIDLI+T                      
Sbjct: 61  KQKKSSKDSVEQWKWKGMVENLQLAHQELTVIIDLIDT---------------------- 120

Query: 121 FELLKVEANDAVTVAGMTRPKPLPNEVLSDLGVSVATKLQCFRHLGKYFKQSAKGLERQV 180
                V+ANDAVTVAGMTRPKP+PNE+LSDL VS ATKLQ +R+LG YFKQSAK LE+++
Sbjct: 121 -----VQANDAVTVAGMTRPKPMPNEILSDLAVSTATKLQGYRNLGNYFKQSAKALEQKI 180

Query: 181 AREARFYGALIRLQQNWKVKRQRVAAPAPANEGFTIDLFDNSSCDPSSVFRPSS-STIRV 240
            REARFYGALIRLQ+NWKVKRQR+ A   +NEGFTIDL D+S  DP+S FRPS+ STIRV
Sbjct: 181 NREARFYGALIRLQRNWKVKRQRMLASNASNEGFTIDLSDSSLYDPTSGFRPSTLSTIRV 240

Query: 241 DHDSSGMLAINLPPNSCHSLRFGFLSGCNVENPLDRGKNESTNSSNQSSMNREKEFTNDD 300
           DHDS+GMLAIN+P +S +SLRFG++    + N  +  ++  + + +      EK   +DD
Sbjct: 241 DHDSAGMLAINVPQDSWYSLRFGYVGLNPIGNSNESDEHIDSTTGHDIPGTSEKLSASDD 300

Query: 301 EYIKETNSLLRQVHHAIFSEQVFDLVNREAFNPSLGINVTGIRENYLQLSIDQGTSVFIS 360
           +Y+KET+SLLR+VH +IF+EQ+FD++NREAFN  +G N++G+REN++++SI QG S+F+S
Sbjct: 301 KYVKETHSLLREVHKSIFAEQLFDMLNREAFNEGVGFNISGLRENFMEMSIGQGASLFVS 360

Query: 361 LVPSGQHCQTVEGVNTGILDNANLPFDSLDEIELPDRSDPLEKKLRNPNHITFEIYLQQI 420
           L PSG++    +       ++A L  +S   +E  +  D   KKL  PN  ++EIYLQQI
Sbjct: 361 LHPSGKNPSIKKS------ESATLLIESSGRVEPAEGGDYRLKKLGFPNRTSYEIYLQQI 420

Query: 421 FHELVFIKSNDRPISSLSRQSGQGSND-GSGLLGHFCLSLAHRMFANNVLMELENVVWKV 480
           FHE  F K+ D+  S   R S Q   D  SGLL HFCLSL HR+F+N VL+ LE+VV KV
Sbjct: 421 FHEHAFGKAKDQLKSKSIRASNQTEKDSNSGLLDHFCLSLTHRIFSNRVLVHLESVVCKV 480

Query: 481 PFLQLISHPTWNSRKSSWTFSMEVPWSILHPNSIQARTSDSHQMNNVTKTQFLTKVVVND 540
           P+L LISHPTWNSR SSWT  M VP SI+     + ++ D  +     KTQF TKVVV D
Sbjct: 481 PYLHLISHPTWNSRTSSWTVFMTVPPSIIPQGRSETQSPDGKRN---LKTQFRTKVVVKD 540

Query: 541 DCITIEGEGAPNVVGLFNGNSKDIHSMNRYGCDLADLPVIILLQVASQIILWLHEEALTW 600
           DCI++E E  PNVVGL   +S ++ S+N+Y CD+ADLPV+IL QVASQI+ WL EEA T 
Sbjct: 541 DCISVEAECTPNVVGLLKSSSCNLFSINKYECDVADLPVMILQQVASQIVCWLLEEARTV 600

Query: 601 GIKANRDFLSLSFELEQGETLRLVAHVDPEDPQGCLSWWLVMDDGLMEDRKLNFDSSDVV 660
           G KA+R+FLSLS E+ +GE + LVAHV+PED +GC+SWWLVM++G  E+R       + V
Sbjct: 601 GTKASREFLSLSLEIVEGERVSLVAHVNPEDAKGCISWWLVMENGCTEER-------EGV 643

Query: 661 PEYRKFLGHLSLEVLHSTLMDLVSLC 683
            E RK LGHLSL+VL+S LMDL++LC
Sbjct: 661 SESRKLLGHLSLDVLYSVLMDLINLC 643

The following BLAST results are available for this feature:

BLAST of CmUC08G143570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038889914.1	0.0e+00	91.87	mediator of RNA polymerase II transcription subunit 17 [Benincasa hispida] >XP_0...	[more]
XP_011656092.1	0.0e+00	91.87	mediator of RNA polymerase II transcription subunit 17 [Cucumis sativus] >XP_011...	[more]
XP_008459609.1	0.0e+00	91.00	PREDICTED: mediator of RNA polymerase II transcription subunit 17 [Cucumis melo]...	[more]
KAA0039269.1	0.0e+00	90.87	mediator of RNA polymerase II transcription subunit 17 [Cucumis melo var. makuwa...	[more]
XP_022987637.1	0.0e+00	88.82	mediator of RNA polymerase II transcription subunit 17-like [Cucurbita maxima]	[more]

BLAST of CmUC08G143570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4K460	4.1e-207	56.12	Mediator of RNA polymerase II transcription subunit 17 OS=Arabidopsis thaliana O...	[more]

BLAST of CmUC08G143570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXX2	0.0e+00	91.87	Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis sativus OX=365...	[more]
A0A1S4E2I2	0.0e+00	91.00	Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo OX=3656 G...	[more]
A0A5D3BMZ9	0.0e+00	91.00	Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo var. maku...	[more]
A0A5A7TDC1	0.0e+00	90.87	Mediator of RNA polymerase II transcription subunit 17 OS=Cucumis melo var. maku...	[more]
A0A6J1JAW7	0.0e+00	88.82	Mediator of RNA polymerase II transcription subunit 17 OS=Cucurbita maxima OX=36...	[more]

BLAST of CmUC08G143570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20170.1	2.9e-208	56.12	RNA polymerase II transcription mediators	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019313	Mediator complex, subunit Med17	PFAM	PF10156	Med17	coord: 52..329 e-value: 1.5E-7 score: 30.6
IPR019313	Mediator complex, subunit Med17	PANTHER	PTHR13114	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 17	coord: 1..680
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 272..289
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 271..293

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC08G143570.1	CmUC08G143570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
cellular_component	GO:0070847	core mediator complex
cellular_component	GO:0016592	mediator complex
molecular_function	GO:0003712	transcription coregulator activity