CmUC07G135150 (gene) Watermelon (USVL531) v1

Overview
NameCmUC07G135150
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr07: 23693394 .. 23694018 (+)
RNA-Seq ExpressionCmUC07G135150
SyntenyCmUC07G135150
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAACCATCCTCTCAAAAGAATGTTCAAATGAAATATTGGGTTGGGGAGGAAAAACATAAGAAGAGGAATGTAAATGGAAAGAAACGGATTCATACAGCAAGCCAGATAATGGTATAGGAGGCAAAGGAATTGGCGGAAGATTCAGAAGAGTCCAAACAAGACGGAAACTCCAAGGATGATCAACCACAAAATATGCACGAGAAGGAGGGCCTGGCCAGGAATAGGCGCAGAACCGCCGTTGCCGACCTCACAAAATCCCATGTTGGCGACCTTGACACCGGAACACAGAGCATCGGCACAACCACACCAGTAGGTAACGCCATCAACCCCGCAGACCGGATCCGTCCTAAAGCATTTGACGGGGCAAGAAGAAGGGAGGGACAGAGGACAGAGATCTACATCGCCGTCGTTATTGGTGGCTTCAGAAGGCAAGCGGATGGCGTAGGAAACATCCTCCGATCGGACTGTAAAGACGAAGATGAGAAGCGAAAAGAAGAAAATGATGGAAATCGGGGGTGTAGAGAAGAGGATCATGTTCGGCGGGCTTTGAAAGCTTGCGTTATTGGAGCTAGATTTAGGGCAGGAAGGGGGAGAGAGACCTCTGTCATGGAATTTTCTTGA

mRNA sequence

ATGGAGGCAAAGGAATTGGCGGAAGATTCAGAAGAGTCCAAACAAGACGGAAACTCCAAGGATGATCAACCACAAAATATGCACGAGAAGGAGGGCCTGGCCAGGAATAGGCGCAGAACCGCCGTTGCCGACCTCACAAAATCCCATGTTGGCGACCTTGACACCGGAACACAGAGCATCGGCACAACCACACCAGTAGGTAACGCCATCAACCCCGCAGACCGGATCCGTCCTAAAGCATTTGACGGGGCAAGAAGAAGGGAGGGACAGAGGACAGAGATCTACATCGCCGTCGTTATTGGTGGCTTCAGAAGGCAAGCGGATGGCGTAGGAAACATCCTCCGATCGGACTGTAAAGACGAAGATGAGAAGCGAAAAGAAGAAAATGATGGAAATCGGGGGTGTAGAGAAGAGGATCATGTTCGGCGGGCTTTGAAAGCTTGCGTTATTGGAGCTAGATTTAGGGCAGGAAGGGGGAGAGAGACCTCTGTCATGGAATTTTCTTGA

Coding sequence (CDS)

ATGGAGGCAAAGGAATTGGCGGAAGATTCAGAAGAGTCCAAACAAGACGGAAACTCCAAGGATGATCAACCACAAAATATGCACGAGAAGGAGGGCCTGGCCAGGAATAGGCGCAGAACCGCCGTTGCCGACCTCACAAAATCCCATGTTGGCGACCTTGACACCGGAACACAGAGCATCGGCACAACCACACCAGTAGGTAACGCCATCAACCCCGCAGACCGGATCCGTCCTAAAGCATTTGACGGGGCAAGAAGAAGGGAGGGACAGAGGACAGAGATCTACATCGCCGTCGTTATTGGTGGCTTCAGAAGGCAAGCGGATGGCGTAGGAAACATCCTCCGATCGGACTGTAAAGACGAAGATGAGAAGCGAAAAGAAGAAAATGATGGAAATCGGGGGTGTAGAGAAGAGGATCATGTTCGGCGGGCTTTGAAAGCTTGCGTTATTGGAGCTAGATTTAGGGCAGGAAGGGGGAGAGAGACCTCTGTCATGGAATTTTCTTGA

Protein sequence

MEAKELAEDSEESKQDGNSKDDQPQNMHEKEGLARNRRRTAVADLTKSHVGDLDTGTQSIGTTTPVGNAINPADRIRPKAFDGARRREGQRTEIYIAVVIGGFRRQADGVGNILRSDCKDEDEKRKEENDGNRGCREEDHVRRALKACVIGARFRAGRGRETSVMEFS
Homology
BLAST of CmUC07G135150 vs. NCBI nr
Match: KAG5405213.1 (hypothetical protein IGI04_011332 [Brassica rapa subsp. trilocularis])

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-04
Identity = 33/78 (42.31%), Postives = 47/78 (60.26%), Query Frame = 0

Query: 10  SEESKQDGNSKDDQPQNMHEKEGLARNRRRTAVADLTKSHVGDLDTGTQSIGTTTPVGNA 69
           SEE+K+D   K   P N+ +K+ L+RNR+  A+ ++T S   D +   QSI TT PV NA
Sbjct: 29  SEEAKEDRKPKSHHPDNVDQKQSLSRNRQPNAITNITSSRFRDTNAVAQSICTTAPVRNA 88

Query: 70  INPADRIRPKAFDGARRR 88
           +  A+RI PK  +  R R
Sbjct: 89  VFSANRISPKTLNRTRSR 106

BLAST of CmUC07G135150 vs. NCBI nr
Match: KAE8009176.1 (hypothetical protein FH972_005627 [Carpinus fangiana])

HSP 1 Score: 57.4 bits (137), Expect = 1.4e-04
Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 0

Query: 1  MEAKELAEDSEESKQDGNSKDDQPQNMHEKEGLARNRRR--TAVADLTKSHVGDLDTGTQ 60
          M  +E    SE+ KQDG ++ D+P ++ +KEGL R+R R  TA  DL   H+GD   G  
Sbjct: 1  MNPREFPSPSEKPKQDGEAEHDEPDDLDQKEGLTRDRARLATATVDLAVPHLGDPGAGAG 60

Query: 61 SIGTTTPVGNAINPAD 75
           +GT TPVG+ ++  D
Sbjct: 61 GVGTATPVGHDVDATD 76

BLAST of CmUC07G135150 vs. NCBI nr
Match: RWV97411.1 (hypothetical protein GW17_00039805 [Ensete ventricosum])

HSP 1 Score: 56.2 bits (134), Expect = 3.1e-04
Identity = 38/118 (32.20%), Postives = 62/118 (52.54%), Query Frame = 0

Query: 10  SEESKQDGNSKDDQPQNMHEKEGLARNRRRTAVADLTKSHVGDLDTGTQSIGTTTPVGNA 69
           S+E+ ++G ++D++P +M E+EGLA +    AVADL    + D D G + +    PV +A
Sbjct: 46  SKEATENGEAEDNEPNDMEEEEGLAGDEAAPAVADLAGPPLRDADAGARRLRAAAPVRDA 105

Query: 70  INPADRIRPKAFDGARRREGQRTEIYIAVVIGGFRRQADGVG---NILRSDCKDEDEK 125
           ++ AD +RP+A D  R              +G    + DGVG    +L +   DE+ K
Sbjct: 106 VHAADGVRPEAIDATRG----------GYTVGSSAAEIDGVGGRVKVLGTSGGDEETK 153

BLAST of CmUC07G135150 vs. NCBI nr
Match: CAB77727.1 (hypothetical protein [Arabidopsis thaliana])

HSP 1 Score: 55.8 bits (133), Expect = 4.1e-04
Identity = 32/87 (36.78%), Postives = 54/87 (62.07%), Query Frame = 0

Query: 1   MEAKELAEDSEESKQDGNSKDDQPQNMHEKEGLARNRRRTAVADLTKSHVGDLDTGTQSI 60
           ++A++L   S+E K++   K   P N+++K+ L+RNR+   + ++T S   + +T  QSI
Sbjct: 308 LDAEKLEPKSKEPKENRKPKKHHPDNVYQKQSLSRNRQTNTITNITSSLFHNTNTMAQSI 367

Query: 61  GTTTPVGNAINPADRIRPKAFDGARRR 88
            TT PV NA+  A+RIRP+  +  R R
Sbjct: 368 CTTAPVSNAVFTANRIRPETLNRTRSR 394

BLAST of CmUC07G135150 vs. ExPASy TrEMBL
Match: A0A7C9E008 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 1.4e-05
Identity = 31/79 (39.24%), Postives = 51/79 (64.56%), Query Frame = 0

Query: 10  SEESKQDGNSKDDQPQNMHEKEGLARNRRRTAVADLTKSHVGDLDTGTQSIGTTTPVGNA 69
           S+E+K D  S+ ++P N+ +K+GL RNR R A+ +L ++ + D  +G   +GT+ PVG+A
Sbjct: 35  SKEAKDDRESQHNEPNNVGQKQGLTRNRARPAITNLAEADLCDAGSGAMRVGTSAPVGDA 94

Query: 70  INPADRIRPKAFDGARRRE 89
           +    R+  +A DGAR  E
Sbjct: 95  VFATHRVGSEALDGARSGE 113

BLAST of CmUC07G135150 vs. ExPASy TrEMBL
Match: A0A5N6QQT6 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_005627 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 6.7e-05
Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 0

Query: 1  MEAKELAEDSEESKQDGNSKDDQPQNMHEKEGLARNRRR--TAVADLTKSHVGDLDTGTQ 60
          M  +E    SE+ KQDG ++ D+P ++ +KEGL R+R R  TA  DL   H+GD   G  
Sbjct: 1  MNPREFPSPSEKPKQDGEAEHDEPDDLDQKEGLTRDRARLATATVDLAVPHLGDPGAGAG 60

Query: 61 SIGTTTPVGNAINPAD 75
           +GT TPVG+ ++  D
Sbjct: 61 GVGTATPVGHDVDATD 76

BLAST of CmUC07G135150 vs. ExPASy TrEMBL
Match: A0A444DH12 (Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00039805 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.5e-04
Identity = 38/118 (32.20%), Postives = 62/118 (52.54%), Query Frame = 0

Query: 10  SEESKQDGNSKDDQPQNMHEKEGLARNRRRTAVADLTKSHVGDLDTGTQSIGTTTPVGNA 69
           S+E+ ++G ++D++P +M E+EGLA +    AVADL    + D D G + +    PV +A
Sbjct: 46  SKEATENGEAEDNEPNDMEEEEGLAGDEAAPAVADLAGPPLRDADAGARRLRAAAPVRDA 105

Query: 70  INPADRIRPKAFDGARRREGQRTEIYIAVVIGGFRRQADGVG---NILRSDCKDEDEK 125
           ++ AD +RP+A D  R              +G    + DGVG    +L +   DE+ K
Sbjct: 106 VHAADGVRPEAIDATRG----------GYTVGSSAAEIDGVGGRVKVLGTSGGDEETK 153

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG5405213.11.1e-0442.31hypothetical protein IGI04_011332 [Brassica rapa subsp. trilocularis][more]
KAE8009176.11.4e-0442.11hypothetical protein FH972_005627 [Carpinus fangiana][more]
RWV97411.13.1e-0432.20hypothetical protein GW17_00039805 [Ensete ventricosum][more]
CAB77727.14.1e-0436.78hypothetical protein [Arabidopsis thaliana][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A7C9E0081.4e-0539.24Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1[more]
A0A5N6QQT66.7e-0542.11Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_005627 PE=4 SV=1[more]
A0A444DH121.5e-0432.20Uncharacterized protein OS=Ensete ventricosum OX=4639 GN=GW17_00039805 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 51..69
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 119..139
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..86

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC07G135150.1CmUC07G135150.1mRNA