CmUC06G126650 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC06G126650
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	LINE-1 retrotransposable element ORF2 protein
Location	CmU531Chr06: 29691522 .. 29693840 (-)
RNA-Seq Expression	CmUC06G126650
Synteny	CmUC06G126650

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAAAAAGCCTATAATCGAGAAAAGAAGGGTCAGCTTTCCTTCTCCAAGGAGACAAATTATTACCTACAATCCTCGTAATGCCCCAGCCGAAACCCTAAAGGAAAATGATGGAAGCAATGGGAACTTTGACCCGCCAAGGCAAAATCGGAAGAAAGAGAAGCTTAAATCTATCATTGAAAAGCCCATTGAGCAAGATGGGCCTTTATGTGAGATAGAAGCCCAAAAAACATCCATGGATCAACTTTTCCATAAAATGGAAATATCAGTAACCGAAGCAAATAGGAAAACACTAGACTTTGAGATAGAAGATTTATATGTGGACCTCGGTGACATTCCAGAATTACCTAATATTCAGATTTCAAGCCTAGAAGCATCACCTCAGAATCAAGACAAGACACAAGTGACCATTGAATATGAGGGGGATAGGATTTCAATAGCAGATCTTAGTGAGCTCTTTGATGAGGGTGAAGCCGTTGAAAAGGAAAAAGTTGGAGAAGAACCAAGCAGCGACATACCAACAACAACAATTGAAACAAGGAACTTTAATTTGCAGCTAAGTAAATTGGCTAACAGAAAACAATTTCTGTATCATCCCAATGCTGGAACAAAACCAAAAAACAAGCTACACTCGCAGAATCAAGAAGGGGCCGACAGTAGCATTATGAAGATCTTGGCTTGGAATGTTAGAGCCCTCGGCTCTGCCCCTAAAAGAGCCTTAATTAAAGATATGATCACTAAAAACAGCTCGGACATTGTCATTCTTACAGAAACGAAATTGGAAAATATTAACCGCCATCTGATCAAATCTATCTGGAGCTCAATCAGCATCGCCTGGACTTACATCAAAGCATCCAGATCAGCTGGAGGCATAATCATCCTCTGGGACTCCCTCTCTCAAGAAGCTATCGAAGCCATTGAAGGTAAATTCACCATCTCTGTTAATTTTAAATGTTCTGATGGTTATAATTGGTGGTTATCAGGTGTTTATGGTCCTGCTAGCAGAAGGAATCGTATAGATTTCTGGAATGAACTATATCTGTTAAAGGATTTCTGTGGTCCAAACTGGATGTTAGGTGGCGATTTTAATGTCTATAGATGGTCCCATGAGACTACTTCTACAAATCCCTCAAGATATTGTATGGGGAAATTCAATTCTTTCATTGAGACTGCTAATTTAAGTGAGCCAGCGCACTCAAATGGAGTCTTCACTTGGTCGAACCTCCGTAGCTCTCCATCAATGTCTAAGCTGGATCGATTTCTTCACACTGAAGGATGGGAACGGAAATTCAAAATCCATCAAGTTCAAAGACTGAACAGAATCATTTCAGATCACTATCCAATACTCCTTCTCTCAGATTCCTTGAGATGGGGACCATGTCCCTTTAAATTCGATAACAGATGGCTCTCACACAAATATCTTAACAAGGAAGTTGAATTAGGATGGTCTTATCGGCAACAACAAGGACATTCTGGCCATGTCTTTATGAAAAATATGAAGATTCTTTCCTCTAAAGTAAAGGCTTGGAATATTGATACTTTCAAAAAGGAGCAAAACATGATGGAGGAAATAGTCAAGAATATCGCTATTATTGATGACAAGGAAAATTCACAAAACATCACTGATATAGACCTACAACAGCGTATTGCCCTCAAAAGTGATCTTCTGAAGTTGAATTTGAATGAAGCGAGGAAGTGGAGTCAGCTTTGTAAGTTGAAGTGGCTCATGGAAGGGGATGAAAATACTGCTTATTTTCATAAGATTTGTTTGGCTCGCCGCAGATTCAATTTTATCTCTGAAATTCAGGATGGGCAAAATATCGCCCAATGCTCGGACAGTGGTATTGAAAAAGCTTTCATTGACCACTTCAATGAAGTTTTTCAAAATGCTCCTCATGAAAAGTGGCTGATTGGAAATCTAAATTGGAGACCGATAACAGAAGCTCAAGCAACCTCTCTTGTTCTTCCATTTACAGAAGCCGAAGTCCTTAGCAAAGTTAACCTGTTGGGAAATAATAAAACACCTGGACCTGATGGCTTTACAATAGAGTTCTTCAAAAAATTCTGGAACATTTTCAGTGGGGACATAATGAAGTTGTTTCACGATTTTTTCTTGAACAAAATTATCAACAAGGCCATGAATACTACGTATATTGCTCTTATCCCGAAAAGATCTCACTGCACAAAAGTTTCTGACTACCGCCCCATCAGCCTAACAACCAGCATGTATAAAATTCTGGCTAAAGTACTCTCTGAAGGGCTTAAAAGACTGTTATGCCATCCACCTTCGCTACTAATCAAGCTGCTTTTGTGGTAG

mRNA sequence

ATGGGGAAAAAGCCTATAATCGAGAAAAGAAGGGTCAGCTTTCCTTCTCCAAGGAGACAAATTATTACCTACAATCCTCGTAATGCCCCAGCCGAAACCCTAAAGGAAAATGATGGAAGCAATGGGAACTTTGACCCGCCAAGGCAAAATCGGAAGAAAGAGAAGCTTAAATCTATCATTGAAAAGCCCATTGAGCAAGATGGGCCTTTATGTGAGATAGAAGCCCAAAAAACATCCATGGATCAACTTTTCCATAAAATGGAAATATCAGTAACCGAAGCAAATAGGAAAACACTAGACTTTGAGATAGAAGATTTATATGTGGACCTCGGTGACATTCCAGAATTACCTAATATTCAGATTTCAAGCCTAGAAGCATCACCTCAGAATCAAGACAAGACACAAGTGACCATTGAATATGAGGGGGATAGGATTTCAATAGCAGATCTTAGTGAGCTCTTTGATGAGGGTGAAGCCGTTGAAAAGGAAAAAGTTGGAGAAGAACCAAGCAGCGACATACCAACAACAACAATTGAAACAAGGAACTTTAATTTGCAGCTAAGTGTTTATGGTCCTGCTAGCAGAAGGAATCGTATAGATTTCTGGAATGAACTATATCTGTTAAAGGATTTCTGTGGTCCAAACTGGATGTTAGGTGGCGATTTTAATGTCTATAGATGGTCCCATGAGACTACTTCTACAAATCCCTCAAGATATTGTATGGGGAAATTCAATTCTTTCATTGAGACTGCTAATTTAAGTGAGCCAGCGCACTCAAATGGAGTCTTCACTTGGTCGAACCTCCGTAGCTCTCCATCAATGTCTAAGCTGGATCGATTTCTTCACACTGAAGGATGGGAACGGAAATTCAAAATCCATCAAGTTCAAAGACTGAACAGAATCATTTCAGATCACTATCCAATACTCCTTCTCTCAGATTCCTTGAGATGGGGACCATGTCCCTTTAAATTCGATAACAGATGGCTCTCACACAAATATCTTAACAAGGAAGTTGAATTAGGATGGTCTTATCGGCAACAACAAGGACATTCTGGCCATGTCTTTATGAAAAATATGAAGATTCTTTCCTCTAAAGTAAAGGCTTGGAATATTGATACTTTCAAAAAGGAGCAAAACATGATGGAGGAAATAGTCAAGAATATCGCTATTATTGATGACAAGGAAAATTCACAAAACATCACTGATATAGACCTACAACAGCGTATTGCCCTCAAAAGTGATCTTCTGAAGTTGAATTTGAATGAAGCGAGGAAGTGGAGTCAGCTTTGTAAGTTGAAGTGGCTCATGGAAGGGGATGAAAATACTGCTTATTTTCATAAGATTTGTTTGGCTCGCCGCAGATTCAATTTTATCTCTGAAATTCAGGATGGGCAAAATATCGCCCAATGCTCGGACAGTGGTATTGAAAAAGCTTTCATTGACCACTTCAATGAAGTTTTTCAAAATGCTCCTCATGAAAAGTGGCTGATTGGAAATCTAAATTGGAGACCGATAACAGAAGCTCAAGCAACCTCTCTTGTTCTTCCATTTACAGAAGCCGAAGTCCTTAGCAAAGTTAACCTGTTGGGAAATAATAAAACACCTGGACCTGATGGCTTTACAATAGAGTTCTTCAAAAAATTCTGGAACATTTTCAGTGGGGACATAATGAAGTTGTTTCACGATTTTTTCTTGAACAAAATTATCAACAAGGCCATGAATACTACGTATATTGCTCTTATCCCGAAAAGATCTCACTGCACAAAAGTTTCTGACTACCGCCCCATCAGCCTAACAACCAGCATGTATAAAATTCTGGCTAAAGTACTCTCTGAAGGGCTTAAAAGACTGTTATGCCATCCACCTTCGCTACTAATCAAGCTGCTTTTGTGGTAG

Coding sequence (CDS)

ATGGGGAAAAAGCCTATAATCGAGAAAAGAAGGGTCAGCTTTCCTTCTCCAAGGAGACAAATTATTACCTACAATCCTCGTAATGCCCCAGCCGAAACCCTAAAGGAAAATGATGGAAGCAATGGGAACTTTGACCCGCCAAGGCAAAATCGGAAGAAAGAGAAGCTTAAATCTATCATTGAAAAGCCCATTGAGCAAGATGGGCCTTTATGTGAGATAGAAGCCCAAAAAACATCCATGGATCAACTTTTCCATAAAATGGAAATATCAGTAACCGAAGCAAATAGGAAAACACTAGACTTTGAGATAGAAGATTTATATGTGGACCTCGGTGACATTCCAGAATTACCTAATATTCAGATTTCAAGCCTAGAAGCATCACCTCAGAATCAAGACAAGACACAAGTGACCATTGAATATGAGGGGGATAGGATTTCAATAGCAGATCTTAGTGAGCTCTTTGATGAGGGTGAAGCCGTTGAAAAGGAAAAAGTTGGAGAAGAACCAAGCAGCGACATACCAACAACAACAATTGAAACAAGGAACTTTAATTTGCAGCTAAGTGTTTATGGTCCTGCTAGCAGAAGGAATCGTATAGATTTCTGGAATGAACTATATCTGTTAAAGGATTTCTGTGGTCCAAACTGGATGTTAGGTGGCGATTTTAATGTCTATAGATGGTCCCATGAGACTACTTCTACAAATCCCTCAAGATATTGTATGGGGAAATTCAATTCTTTCATTGAGACTGCTAATTTAAGTGAGCCAGCGCACTCAAATGGAGTCTTCACTTGGTCGAACCTCCGTAGCTCTCCATCAATGTCTAAGCTGGATCGATTTCTTCACACTGAAGGATGGGAACGGAAATTCAAAATCCATCAAGTTCAAAGACTGAACAGAATCATTTCAGATCACTATCCAATACTCCTTCTCTCAGATTCCTTGAGATGGGGACCATGTCCCTTTAAATTCGATAACAGATGGCTCTCACACAAATATCTTAACAAGGAAGTTGAATTAGGATGGTCTTATCGGCAACAACAAGGACATTCTGGCCATGTCTTTATGAAAAATATGAAGATTCTTTCCTCTAAAGTAAAGGCTTGGAATATTGATACTTTCAAAAAGGAGCAAAACATGATGGAGGAAATAGTCAAGAATATCGCTATTATTGATGACAAGGAAAATTCACAAAACATCACTGATATAGACCTACAACAGCGTATTGCCCTCAAAAGTGATCTTCTGAAGTTGAATTTGAATGAAGCGAGGAAGTGGAGTCAGCTTTGTAAGTTGAAGTGGCTCATGGAAGGGGATGAAAATACTGCTTATTTTCATAAGATTTGTTTGGCTCGCCGCAGATTCAATTTTATCTCTGAAATTCAGGATGGGCAAAATATCGCCCAATGCTCGGACAGTGGTATTGAAAAAGCTTTCATTGACCACTTCAATGAAGTTTTTCAAAATGCTCCTCATGAAAAGTGGCTGATTGGAAATCTAAATTGGAGACCGATAACAGAAGCTCAAGCAACCTCTCTTGTTCTTCCATTTACAGAAGCCGAAGTCCTTAGCAAAGTTAACCTGTTGGGAAATAATAAAACACCTGGACCTGATGGCTTTACAATAGAGTTCTTCAAAAAATTCTGGAACATTTTCAGTGGGGACATAATGAAGTTGTTTCACGATTTTTTCTTGAACAAAATTATCAACAAGGCCATGAATACTACGTATATTGCTCTTATCCCGAAAAGATCTCACTGCACAAAAGTTTCTGACTACCGCCCCATCAGCCTAACAACCAGCATGTATAAAATTCTGGCTAAAGTACTCTCTGAAGGGCTTAAAAGACTGTTATGCCATCCACCTTCGCTACTAATCAAGCTGCTTTTGTGGTAG

Protein sequence

MGKKPIIEKRRVSFPSPRRQIITYNPRNAPAETLKENDGSNGNFDPPRQNRKKEKLKSIIEKPIEQDGPLCEIEAQKTSMDQLFHKMEISVTEANRKTLDFEIEDLYVDLGDIPELPNIQISSLEASPQNQDKTQVTIEYEGDRISIADLSELFDEGEAVEKEKVGEEPSSDIPTTTIETRNFNLQLSVYGPASRRNRIDFWNELYLLKDFCGPNWMLGGDFNVYRWSHETTSTNPSRYCMGKFNSFIETANLSEPAHSNGVFTWSNLRSSPSMSKLDRFLHTEGWERKFKIHQVQRLNRIISDHYPILLLSDSLRWGPCPFKFDNRWLSHKYLNKEVELGWSYRQQQGHSGHVFMKNMKILSSKVKAWNIDTFKKEQNMMEEIVKNIAIIDDKENSQNITDIDLQQRIALKSDLLKLNLNEARKWSQLCKLKWLMEGDENTAYFHKICLARRRFNFISEIQDGQNIAQCSDSGIEKAFIDHFNEVFQNAPHEKWLIGNLNWRPITEAQATSLVLPFTEAEVLSKVNLLGNNKTPGPDGFTIEFFKKFWNIFSGDIMKLFHDFFLNKIINKAMNTTYIALIPKRSHCTKVSDYRPISLTTSMYKILAKVLSEGLKRLLCHPPSLLIKLLLW

Homology

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BLAST of CmUC06G126650 vs. NCBI nr
Match: TYK29577.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 392.5 bits (1007), Expect = 6.9e-105
Identity = 237/665 (35.64%), Postives = 350/665 (52.63%), Query Frame = 0


Query: 5   PIIEKRRVSFPSPRRQIITYNPRNAPAETLKENDGSNGNFDPPRQNRKKEKLKSIIEKPI 64
           PI  KR+VSF SP+ +   ++  +AP +TLK   GS  ++    + + K   +SI +K  
Sbjct: 21  PINTKRKVSFSSPKNETFLFSAHSAPTKTLKL--GSPMSY-AKMEAKSKRPTQSIKKKVY 80

Query: 65  EQDGPLCEIEAQKTSMDQLFHKMEISVTEANRKTLDFEIEDLYVDLGDIPELPNIQISSL 124
                  E E  +TS             + +++ +D    +L VDLG I  L +   S  
Sbjct: 81  RVKSRSMERETPQTS------------RQKDKEKIDPNEFELVVDLGHISPLSDTDFSCP 140

Query: 125 EASPQNQDKTQVTIEYEGDRISIADLSE-LFDEGEAVEKEKVGEEPSSDIP------TTT 184
           E+       T  T E +  + S+A +     ++ E  +KE + EE   D        T  
Sbjct: 141 ESPSYIPSPTSPT-ESDIVKDSLASMMTCAHEDREKKKKENLREETEDDEVSFKRKLTDW 200

Query: 185 IETRN------FNLQL--------------------------------------SVYGPA 244
           ++  N      FN Q                                       ++YGPA
Sbjct: 201 LKENNLRLAADFNSQFNSVTNDRMISILNGPPNVGAFSVSIQVGSNNGASWWLSAIYGPA 260

Query: 245 SRRNRIDFWNELYLLKDFCGPNWMLGGDFNVYRWSHETTSTNPSRYCMGKFNSFIETANL 304
            R+NR  FW EL  LK  C P W+LGGDFNV RW  ET++ NP+   M +FN+FI   NL
Sbjct: 261 KRKNRPLFWEELENLKSICFPTWILGGDFNVIRWKEETSTKNPASLSMKRFNTFISNCNL 320

Query: 305 SEPAHSNGVFTWSNLRSSPSMSKLDRFLHTEGWERKFKIHQVQRLNRIISDHYPILLLSD 364
            +P  +N  FTWSNLR+  ++S+LDRFL +  WE  F  H  + L R  SDH+PI+L S 
Sbjct: 321 IDPPLTNAKFTWSNLRAQATLSRLDRFLFSTHWENIFPGHTSKVLTRTTSDHFPIVLESS 380

Query: 365 SLRWGPCPFKFDNRWLSHKYLNKEVELGWSYRQQQGHSGHVFMKNMKILSSKVKAWNIDT 424
           ++ WGP PF+F N +L      K +E  W    Q G++G+ FM  +K L+ K+KAW  + 
Sbjct: 381 TISWGPSPFRFTNAYLKDPDYKKNIEFWWGNTSQPGYAGYSFMHRLKQLALKIKAWGREK 440

Query: 425 FKKEQNMMEEIVKNIAIIDDKENSQNITDIDLQQRIALKSDLLKLNLNEARKWSQLCKLK 484
             K +   +  +K I +ID  E   + T+I  ++RIALK+DL ++ L EA+ W+Q CK  
Sbjct: 441 KGKNEASKKAWIKEIDLIDKLEAEGSATEIHREKRIALKADLSQITLTEAQIWAQKCKRI 500

Query: 485 WLMEGDENTAYFHKICLARRRFNFISEIQDGQNIAQCSDSGIEKAFIDHFNEVFQNAPHE 544
           W+ EGDEN+++FHKIC AR++   IS+I +       +DS I  AFI HF E++ +  + 
Sbjct: 501 WVHEGDENSSFFHKICTARQKKCLISKIINNSGQNCLNDSDIADAFIQHFEEIYTDNRNS 560

Query: 545 KWLIGNLNWRPITEAQATSLVLPFTEAEVLSKVNLLGNNKTPGPDGFTIEFFKKFWNIFS 604
              I NL+W PI+   +  L  PF EAE+   +     NK PGPDG+T++F +K W+   
Sbjct: 561 HLFIDNLDWCPISNTNSDLLDKPFNEAEIWLTLKSFAKNKAPGPDGYTMDFLQKSWSFMK 620

Query: 605 GDIMKLFHDFFLNKIINKAMNTTYIALIPKRSHCTKVSDYRPISLTTSMYKILAKVLSEG 619
            +I  +F DF     INK +N T I LI K+ +C  V+D+RPISLTT++YK++AK L++ 
Sbjct: 621 QNICDIFKDFHSTHTINKVVNETLITLIAKKENCETVADFRPISLTTAIYKLIAKALADR 669

[Close]

BLAST of CmUC06G126650 vs. NCBI nr
Match: KAA0039950.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK24553.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 387.9 bits (995), Expect = 1.7e-103
Identity = 188/431 (43.62%), Postives = 266/431 (61.72%), Query Frame = 0


Query: 188 SVYGPASRRNRIDFWNELYLLKDFCGPNWMLGGDFNVYRWSHETTSTNPSRYCMGKFNSF 247
           ++YGPA R+NR  FW EL  LK  C P W+LGGDFNV RW  ETT+ NP+   M +FNSF
Sbjct: 35  AIYGPAKRKNRPLFWEELEHLKSICLPTWILGGDFNVIRWKEETTTKNPALLSMRRFNSF 94

Query: 248 IETANLSEPAHSNGVFTWSNLRSSPSMSKLDRFLHTEGWERKFKIHQVQRLNRIISDHYP 307
           I   NL +P  SN  +TWSNLR+  ++S+LDRFL T  WE  F  H  + L R  SDH+P
Sbjct: 95  ISNCNLIDPPLSNAKYTWSNLRAQATLSRLDRFLFTSQWENIFPGHTSKVLTRTTSDHFP 154

Query: 308 ILLLSDSLRWGPCPFKFDNRWLSHKYLNKEVELGWSYRQQQGHSGHVFMKNMKILSSKVK 367
           I+L S ++ WGP PF+F N +L      K +E  W    Q G++G+ FM+ +K L+  +K
Sbjct: 155 IVLESSTISWGPSPFRFTNAYLKDPDYKKNIEFWWGNTSQPGYAGYSFMRRLKQLALIIK 214

Query: 368 AWNIDTFKKEQNMMEEIVKNIAIIDDKENSQNITDIDLQQRIALKSDLLKLNLNEARKWS 427
            W  D   K +   +  +K I  ID  E   + T+I  ++R ALK+DL ++NL EA+ W+
Sbjct: 215 TWGRDKKGKNEASKKACIKEIDQIDKLEAEGSATEIHREKRTALKADLSQINLTEAQIWA 274

Query: 428 QLCKLKWLMEGDENTAYFHKICLARRRFNFISEIQDGQNIAQCSDSGIEKAFIDHFNEVF 487
           Q CK  W+ EGDEN+++FHKIC AR++   IS+I +       +DS I  AFI HF +++
Sbjct: 275 QKCKRIWVHEGDENSSFFHKICTARQKKCLISKIINNSGQNCLNDSDIADAFIQHFEDIY 334

Query: 488 QNAPHEKWLIGNLNWRPITEAQATSLVLPFTEAEVLSKVNLLGNNKTPGPDGFTIEFFKK 547
            +  + +  I NL+W PI+   +  L  PF EAE+   +     NK PGPDG+ ++F +K
Sbjct: 335 TDNRNSQLFIENLDWCPISNINSELLDKPFNEAEIWLTLKSFAKNKAPGPDGYAMDFLQK 394

Query: 548 FWNIFSGDIMKLFHDFFLNKIINKAMNTTYIALIPKRSHCTKVSDYRPISLTTSMYKILA 607
            W+    +I  +F DF    IINK +N T I LI K+ HC   +D+RPISLTT++YK++A
Sbjct: 395 SWSFMKQNICDIFKDFHSTHIINKVVNETLITLIAKKEHCETAADFRPISLTTAIYKLIA 454

Query: 608 KVLSEGLKRLL 619
           K L++ LK+ L
Sbjct: 455 KTLADRLKQTL 465

[Close]

BLAST of CmUC06G126650 vs. NCBI nr
Match: KAA0040038.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 387.1 bits (993), Expect = 2.9e-103
Identity = 194/432 (44.91%), Postives = 266/432 (61.57%), Query Frame = 0


Query: 188 SVYGPASRRNRIDFWNELYLLKDFCGPNWMLGGDFNVYRWSHETTSTNPSRYCMGKFNSF 247
           ++YGP+  RNR  FW EL  LK+ C P W+L GDFNV R+S ET++ NPS++ M  FN F
Sbjct: 38  AIYGPSGGRNRKSFWAELLDLKNKCSPTWLLAGDFNVVRFSSETSTQNPSKHSMRCFNKF 97

Query: 248 IETANLSEPAHSNGVFTWSNLRSSPSMSKLDRFLHTEGWERKFKIHQVQRLNRIISDHYP 307
           I  +NL +P  SN  FTWSNLR  P +S++DRFL+T  WE  F  H  + L+R+ SDH+P
Sbjct: 98  ISDSNLIDPPLSNAKFTWSNLRVQPVLSRIDRFLYTTNWENLFTAHYSKTLSRVTSDHFP 157

Query: 308 ILLLSDSLRWGPCPFKFDNRWLSHKYLNKEVELGWSYRQQQGHSGHVFMKNMKILSSKVK 367
           I L S  + WGP PFK  N  L   +L K V   W   +Q+GH G  FM+ +K LS+ ++
Sbjct: 158 IALESSMISWGPSPFKLINVHLKESWLKKNVTYWWKNLRQEGHPGFSFMRKLKQLSAIIR 217

Query: 368 AWNIDTFKKEQNMMEEIVKNIAIIDDKENSQNITDIDLQQRIALKSDLLKLNLNEARKWS 427
                            +K I  ID  E   N+++    +R  LK+D+L     EA+ W 
Sbjct: 218 NEQRKNKCYSDEDKNAWIKEIDNIDRLEAEGNLSEELSLRRTRLKADVLMSGFKEAQIWY 277

Query: 428 QLCKLKWLMEGDENTAYFHKICLARRRFNFISEIQDGQNIAQCSDSGIEKAFIDHFNEVF 487
           Q  K  W+ EGDENT++FHKIC AR+R + IS I     +   ++  I KAF+DHF +++
Sbjct: 278 QKSKRLWITEGDENTSFFHKICSARQRRSIISNINSVDGVPCSTNESIAKAFLDHFEDIY 337

Query: 488 QNAPHEK-WLIGNLNWRPITEAQATSLVLPFTEAEVLSKVNLLGNNKTPGPDGFTIEFFK 547
           +    E  WLI NL+W PI+  QA +L   FTE E+ + +    NNK+PGPDGFT+EF+K
Sbjct: 338 KGGGEESPWLIDNLSWSPISTTQAQNLCSLFTEEEIHAALTAFSNNKSPGPDGFTMEFYK 397

Query: 548 KFWNIFSGDIMKLFHDFFLNKIINKAMNTTYIALIPKRSHCTKVSDYRPISLTTSMYKIL 607
             W+    +I+ +F DF  N IINKA+N T IALI K+  C + +DYRPISLTTS+YK++
Sbjct: 398 STWSDLKEEILNIFRDFHSNCIINKAVNITNIALIAKKEKCAESADYRPISLTTSIYKLI 457

Query: 608 AKVLSEGLKRLL 619
           AKV++E LK  L
Sbjct: 458 AKVIAERLKETL 469

[Close]

BLAST of CmUC06G126650 vs. NCBI nr
Match: TYJ99326.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 385.6 bits (989), Expect = 8.4e-103
Identity = 191/433 (44.11%), Postives = 271/433 (62.59%), Query Frame = 0


Query: 188 SVYGPASRRNRIDFWNELYLLKDFCGPNWMLGGDFNVYRWSHETTSTNPSRYCMGKFNSF 247
           ++YGPA R+NR  FW EL  LK  C P W+LGGDFNV RW  ET++ NP+   M +FN+F
Sbjct: 35  AIYGPAKRKNRPLFWEELENLKSICFPTWILGGDFNVIRWKEETSTKNPASLSMKRFNTF 94

Query: 248 IETANLSEPAHSNGVFTWSNLRSSPSMSKLDRFLHTEGWERKFKIHQVQRLNRIISDHYP 307
           I   NL +P  +N  FTWSNLR+  ++S+LDRFL +  WE  F  H  + L R  SDH+P
Sbjct: 95  ISNCNLIDPPLTNAKFTWSNLRAQATLSRLDRFLFSTQWENIFPGHTSKVLTRTTSDHFP 154

Query: 308 ILLLSDSLRWGPCPFKFDNRWLSHKYLNKEVELGWSYRQQQGHSGHVFMKNMKILSSKVK 367
           I+L S S+ WGP PF+F N +L      + +E  W    Q G +G+ FM  +K L+ K+K
Sbjct: 155 IVLESSSISWGPSPFRFTNAYLKDPDYKRNIEFWWGNTSQPGFAGYSFMHRLKQLAMKIK 214

Query: 368 AWNIDTFKKEQNMMEEIVKNIAIIDDKENSQNITDIDLQQRIALKSDLLKLNLNEARKWS 427
           AW  +   K++   +  +K I +I+  E     T+I  ++RIALK+DL ++ L EA+ W+
Sbjct: 215 AWGREKKGKDEASKKAWIKEIDLINKLEAEGTSTEIHREKRIALKADLSQITLTEAQIWA 274

Query: 428 QLCKLKWLMEGDENTAYFHKICLARRRFNFISEIQD--GQNIAQCSDSGIEKAFIDHFNE 487
           Q CK  W+ EGDEN+++FHKIC AR++   IS+I +  GQN    +DS I  AFI HF E
Sbjct: 275 QKCKRIWVHEGDENSSFFHKICTARQKKCLISKIINICGQNC--LNDSDIVDAFIQHFEE 334

Query: 488 VFQNAPHEKWLIGNLNWRPITEAQATSLVLPFTEAEVLSKVNLLGNNKTPGPDGFTIEFF 547
           ++ +  +    I NL+W PI+   +  L  PF EAE+   +     NK PGPDGFT++F 
Sbjct: 335 IYTDNRNSHLFIDNLDWCPISNTNSGLLDKPFNEAEIWLTLKSFAKNKAPGPDGFTMDFL 394

Query: 548 KKFWNIFSGDIMKLFHDFFLNKIINKAMNTTYIALIPKRSHCTKVSDYRPISLTTSMYKI 607
           +K W+    +I  +F DF  N  INK +N T I  I K+ +C  V+D+RPISLTT++YK+
Sbjct: 395 QKSWSFMKQNICDIFKDFHSNHTINKVVNETLITFIAKKENCETVADFRPISLTTAIYKL 454

Query: 608 LAKVLSEGLKRLL 619
           +AKVL++ LK+ L
Sbjct: 455 IAKVLADRLKQTL 465

[Close]

BLAST of CmUC06G126650 vs. NCBI nr
Match: TYK08190.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])

HSP 1 Score: 366.7 bits (940), Expect = 4.0e-97
Identity = 180/431 (41.76%), Postives = 254/431 (58.93%), Query Frame = 0


Query: 188  SVYGPASRRNRIDFWNELYLLKDFCGPNWMLGGDFNVYRWSHETTSTNPSRYCMGKFNSF 247
            SVYGP    +R   W EL +L+  C PNW++ GDFN+ RW  ET + +  +  M  FN+F
Sbjct: 715  SVYGPYKYNDRTKLWPELEILQSLCLPNWLIAGDFNIVRWERETNAKSLDKRNMANFNNF 774

Query: 248  IETANLSEPAHSNGVFTWSNLRSSPSMSKLDRFLHTEGWERKFKIHQVQRLNRIISDHYP 307
            I    L +P   N  FTWSNLR +P+ S+LDRFL ++GWE  F +H  + L R ISDH+P
Sbjct: 775  ISVNELIDPPPLNNNFTWSNLRVNPTYSRLDRFLLSKGWENAFGLHTSRTLERNISDHFP 834

Query: 308  ILLLSDSLRWGPCPFKFDNRWLSHKYLNKEVELGWSYRQQQGHSGHVFMKNMKILSSKVK 367
            ILL S  ++WGPCPF+ +N  L  K   K     W+  +Q G  G+ F++++  LS  +K
Sbjct: 835  ILLESPQIKWGPCPFRLNNSSLRDKEFQKNFINWWNSSKQAGFPGYAFIQSLNSLSKFIK 894

Query: 368  AWNIDTFKKEQNMMEEIVKNIAIIDDKENSQNITDIDLQQRIALKSDLLKLNLNEARKWS 427
             W  +         + ++K I IID  E    ++    Q+RI+LKSDLL +  N+A+ W 
Sbjct: 895  EWQHNKVNLYDANKKALLKEIDIIDKLEFQGEMSTTHHQKRISLKSDLLSIENNQAQIWH 954

Query: 428  QLCKLKWLMEGDENTAYFHKICLARRRFNFISEIQDGQNIAQCSDSGIEKAFIDHFNEVF 487
            Q  + +W + GDEN +YFH+IC   +R N I  I D    +  S   I + FI HF  ++
Sbjct: 955  QRARQRWNLLGDENNSYFHRICTINQRKNLIKSICDPAGTSLDSIDDISRTFISHFQNIY 1014

Query: 488  QNAPHEKWLIGNLNWRPITEAQATSLVLPFTEAEVLSKVNLLGNNKTPGPDGFTIEFFKK 547
                +E+ LI NL+W PI+    + L  PF E+E+ S +    N K PGPDG+T+ F+KK
Sbjct: 1015 TKESYEEILIDNLSWNPISRLCQSELCKPFDESEIKSTIMSFSNEKAPGPDGYTMLFYKK 1074

Query: 548  FWNIFSGDIMKLFHDFFLNKIINKAMNTTYIALIPKRSHCTKVSDYRPISLTTSMYKILA 607
             W     D++ +F DF    I+N  +N T+IALI K+  C+K SDYRPISLTTS+YKI+A
Sbjct: 1075 HWPDLKDDLLNVFKDFHKAGIVNNNVNNTFIALISKKEKCSKPSDYRPISLTTSLYKIMA 1134

Query: 608  KVLSEGLKRLL 619
            K L+  LK  L
Sbjct: 1135 KALANRLKSAL 1145

[Close]

BLAST of CmUC06G126650 vs. ExPASy Swiss-Prot
Match: O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 1.4e-12
Identity = 83/372 (22.31%), Postives = 162/372 (43.55%), Query Frame = 0


Query: 275 SKLDRFLHTEGWERKFKIHQVQRLNRIISDHYPI--------LLLSDSLRWGPCPFKFDN 334
           SK+D  + ++    K K  + + +   +SDH  I        L  S S  W       ++
Sbjct: 202 SKIDHIVGSKALLSKCK--RTEIITNYLSDHSAIKLELRIKNLTQSRSTTWKLNNLLLND 261

Query: 335 RWLSHKYLNKEVELGWSYRQQQGHSGHVFMKNMK-ILSSKVKAWNIDTFKKEQNMMEEIV 394
            W+ H  +  E+++ +   + +  +        K +   K  A N    K+E++ ++ + 
Sbjct: 262 YWV-HNEMKAEIKMFFETNENKDTTYQNLWDAFKAVCRGKFIALNAYKRKQERSKIDTLT 321

Query: 395 KNIAIIDDKENS-------QNITDIDLQ-QRIALKSDLLKLNLNEARKWSQLCKLKWLME 454
             +  ++ +E +       Q IT I  + + I  +  L K  +NE+R W      + + +
Sbjct: 322 SQLKELEKQEQTHSKASRRQEITKIRAELKEIETQKTLQK--INESRSWF----FERINK 381

Query: 455 GDENTAYFHKICLARRRFNFISEIQDGQNIAQCSDSGIEKAFIDHFNEVF----QNAPHE 514
            D   A   ++   +R  N I  I++ +       + I+    +++  ++    +N    
Sbjct: 382 IDRPLA---RLIKKKREKNQIDTIKNDKGDITTDPTEIQTTIREYYKHLYANKLENLEEM 441

Query: 515 KWLIGNLNWRPITEAQATSLVLPFTEAEVLSKVNLLGNNKTPGPDGFTIEFFKKFWNIFS 574
              +       + + +  SL  P T +E+++ +N L   K+PGPDGFT EF++++     
Sbjct: 442 DTFLDTYTLPRLNQEEVESLNRPITGSEIVAIINSLPTKKSPGPDGFTAEFYQRYKEELV 501

Query: 575 GDIMKLFHDFFLNKIINKAMNTTYIALIPKRSH-CTKVSDYRPISLTTSMYKILAKVLS- 621
             ++KLF       I+  +     I LIPK     TK  ++RPISL     KIL K+L+ 
Sbjct: 502 PFLLKLFQSIEKEGILPNSFYEASIILIPKPGRDTTKKENFRPISLMNIDAKILNKILAN 561

[Close]

BLAST of CmUC06G126650 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)

HSP 1 Score: 74.3 bits (181), Expect = 5.4e-12
Identity = 100/464 (21.55%), Postives = 205/464 (44.18%), Query Frame = 0


Query: 187 LSVYGPASRRNRIDFWNELYLLKDFCGPNWMLGGDFNVYRWSHETTSTNPSRYCMGKFNS 246
           L++Y P +R       + L  LK +  P+ ++ GDFN    S + +          K   
Sbjct: 119 LNIYAPNARAATF-IRDTLVKLKAYIAPHTIIVGDFNTPLSSKDRSWKQKLNRDTVKLTE 178

Query: 247 FIETANLSEPAHSNGVFTWS-NLRSSP--SMSKLDRFL-HTEGWERKFKIHQVQRLNRII 306
            ++  +L++   +    T      S+P  + SK+D  + H  G  R      ++ +  I+
Sbjct: 179 VMKQMDLTDIYRTFYPKTKGYTFFSAPHGTFSKIDHIIGHKTGLNR---YKNIEIVPCIL 238

Query: 307 SDHYPI-LLLSDSLRWGPCPFKFD------NRWLSHKYLNKEVELGWSYRQQQGHSGHVF 366
           SDH+ + L+ ++++  G   F +       N  L  + + KE++    + + +  +    
Sbjct: 239 SDHHGLRLIFNNNINNGKPTFTWKLNNTLLNDTLVKEGIKKEIKDFLEFNENEATTYPNL 298

Query: 367 MKNMK-ILSSKVKAWNIDTFKKEQNMMEEIVKNIAIIDDKENSQNITDIDLQQRIALKSD 426
              MK  L  K+ A +    K+E      +  ++  ++ KE + +      Q+ I L+ +
Sbjct: 299 WDTMKAFLRGKLIALSASKKKRETAHTSSLTTHLKALEKKE-ANSPKRSRRQEIIKLRGE 358

Query: 427 LLKL-------NLNEARKW-----SQLCK-LKWLMEGDENTAYFHKICLARRRFNFISEI 486
           + ++        +N+ R W     +++ K L  L +G  +    +KI     + +  ++ 
Sbjct: 359 INQVETRRTIQRINQTRSWFFEKINKIDKPLARLTKGHRDKILINKI--RNEKGDITTDP 418

Query: 487 QDGQNIAQCSDSGIEKAFIDHFNEVFQNAPHEKWLIGNLNWRPITEAQATSLVLPFTEAE 546
           ++ QN  +     +    +++ +E+ +    +++ +  LN     + Q   L  P +  E
Sbjct: 419 EEIQNTIRSFYKRLYSTKLENLDEMDKFL--DRYQVPKLN-----QDQVDHLNSPISPKE 478

Query: 547 VLSKVNLLGNNKTPGPDGFTIEFFKKFWNIFSGDIMKLFHDFFLNKIINKAMNTTYIALI 606
           + + +N L   K+PGPDGF+ EF++ F       + KLFH   +   +  +     I LI
Sbjct: 479 IEAVINSLPTKKSPGPDGFSAEFYQTFKEDLIPILHKLFHKIEVEGTLPNSFYEATITLI 538

Query: 607 PK-RSHCTKVSDYRPISLTTSMYKILAKVLSEGLK---RLLCHP 622
           PK +   TK+ ++RPISL     KIL K+L+  ++   + + HP
Sbjct: 539 PKPQKDPTKIENFRPISLMNIDAKILNKILANRIQEHIKAIIHP 568

[Close]

BLAST of CmUC06G126650 vs. ExPASy Swiss-Prot
Match: P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 7.1e-12
Identity = 39/120 (32.50%), Postives = 67/120 (55.83%), Query Frame = 0


Query: 505 ITEAQATSLVLPFTEAEVLSKVNLLGNNKTPGPDGFTIEFFKKFWNIFSGDIMKLFHDFF 564
           ++E +   L  P T  E+   + L+ +NK+PG DG TIEFF+ FW+    D  ++  + F
Sbjct: 437 VSERRKERLETPITLDELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAF 496

Query: 565 LNKIINKAMNTTYIALIPKRSHCTKVSDYRPISLTTSMYKILAKVLSEGLKRLLC---HP 622
               +  +     ++L+PK+     + ++RP+SL ++ YKI+AK +S  LK +L    HP
Sbjct: 497 KKGELPLSCRRAVLSLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHP 556

[Close]

BLAST of CmUC06G126650 vs. ExPASy Swiss-Prot
Match: P08548 (LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.0e-10
Identity = 81/370 (21.89%), Postives = 167/370 (45.14%), Query Frame = 0


Query: 275 SKLDRFLHTEGWERKFKIHQVQRLNRIISDHYPI---LLLSDSLRWGPCPFKFDNRWLSH 334
           SK+D  L  +    KFK  +++ +  I SDH+ I   L  + +L      +K +N  L  
Sbjct: 201 SKIDHILGHKSNLSKFK--KIEIIPCIFSDHHGIKVELNNNRNLHTHTKTWKLNNLMLKD 260

Query: 335 KYLNKEVELGWSYRQQQGHSGHVFMKNM-----KILSSKVKAWNIDTFKKEQNMMEEIVK 394
            ++  E++   +   +Q ++     +N+      +L  K  A      K E+  +  ++ 
Sbjct: 261 TWVIDEIKKEITKFLEQNNNQDTNYQNLWDTAKAVLRGKFIALQAFLKKTEREEVNNLMG 320

Query: 395 NIAIIDDKENS-------QNITDIDLQQRIALKSDLLKLNLNEARKWSQLCKLKWLMEGD 454
           ++  ++ +E+S       + IT I  +    +++  +   +N+++ W      + + + D
Sbjct: 321 HLKQLEKEEHSNPKPSRRKEITKIRAELN-EIENKRIIQQINKSKSWF----FEKINKID 380

Query: 455 ENTAYFHKICLARRRFNFISEIQDGQNIAQCSDSGIEKAFIDHFNEV----FQNAPHEKW 514
           +  A    +   +R  + IS I++G +      S I+K   +++ ++    ++N      
Sbjct: 381 KPLA---NLTRKKRVKSLISSIRNGNDEITTDPSEIQKILNEYYKKLYSHKYENLKEIDQ 440

Query: 515 LIGNLNWRPITEAQATSLVLPFTEAEVLSKVNLLGNNKTPGPDGFTIEFFKKFWNIFSGD 574
            +   +   +++ +   L  P + +E+ S +  L   K+PGPDGFT EF++ F       
Sbjct: 441 YLEACHLPRLSQKEVEMLNRPISSSEIASTIQNLPKKKSPGPDGFTSEFYQTFKEELVPI 500

Query: 575 IMKLFHDFFLNKIINKAMNTTYIALIPK-RSHCTKVSDYRPISLTTSMYKILAKVLS--- 621
           ++ LF +     I+        I LIPK     T+  +YRPISL     KIL K+L+   
Sbjct: 501 LLNLFQNIEKEGILPNTFYEANITLIPKPGKDPTRKENYRPISLMNIDAKILNKILTNRI 560

[Close]

BLAST of CmUC06G126650 vs. ExPASy TrEMBL
Match: A0A5D3E0F6 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001830 PE=4 SV=1)

HSP 1 Score: 392.5 bits (1007), Expect = 3.3e-105
Identity = 237/665 (35.64%), Postives = 350/665 (52.63%), Query Frame = 0


Query: 5   PIIEKRRVSFPSPRRQIITYNPRNAPAETLKENDGSNGNFDPPRQNRKKEKLKSIIEKPI 64
           PI  KR+VSF SP+ +   ++  +AP +TLK   GS  ++    + + K   +SI +K  
Sbjct: 21  PINTKRKVSFSSPKNETFLFSAHSAPTKTLKL--GSPMSY-AKMEAKSKRPTQSIKKKVY 80

Query: 65  EQDGPLCEIEAQKTSMDQLFHKMEISVTEANRKTLDFEIEDLYVDLGDIPELPNIQISSL 124
                  E E  +TS             + +++ +D    +L VDLG I  L +   S  
Sbjct: 81  RVKSRSMERETPQTS------------RQKDKEKIDPNEFELVVDLGHISPLSDTDFSCP 140

Query: 125 EASPQNQDKTQVTIEYEGDRISIADLSE-LFDEGEAVEKEKVGEEPSSDIP------TTT 184
           E+       T  T E +  + S+A +     ++ E  +KE + EE   D        T  
Sbjct: 141 ESPSYIPSPTSPT-ESDIVKDSLASMMTCAHEDREKKKKENLREETEDDEVSFKRKLTDW 200

Query: 185 IETRN------FNLQL--------------------------------------SVYGPA 244
           ++  N      FN Q                                       ++YGPA
Sbjct: 201 LKENNLRLAADFNSQFNSVTNDRMISILNGPPNVGAFSVSIQVGSNNGASWWLSAIYGPA 260

Query: 245 SRRNRIDFWNELYLLKDFCGPNWMLGGDFNVYRWSHETTSTNPSRYCMGKFNSFIETANL 304
            R+NR  FW EL  LK  C P W+LGGDFNV RW  ET++ NP+   M +FN+FI   NL
Sbjct: 261 KRKNRPLFWEELENLKSICFPTWILGGDFNVIRWKEETSTKNPASLSMKRFNTFISNCNL 320

Query: 305 SEPAHSNGVFTWSNLRSSPSMSKLDRFLHTEGWERKFKIHQVQRLNRIISDHYPILLLSD 364
            +P  +N  FTWSNLR+  ++S+LDRFL +  WE  F  H  + L R  SDH+PI+L S 
Sbjct: 321 IDPPLTNAKFTWSNLRAQATLSRLDRFLFSTHWENIFPGHTSKVLTRTTSDHFPIVLESS 380

Query: 365 SLRWGPCPFKFDNRWLSHKYLNKEVELGWSYRQQQGHSGHVFMKNMKILSSKVKAWNIDT 424
           ++ WGP PF+F N +L      K +E  W    Q G++G+ FM  +K L+ K+KAW  + 
Sbjct: 381 TISWGPSPFRFTNAYLKDPDYKKNIEFWWGNTSQPGYAGYSFMHRLKQLALKIKAWGREK 440

Query: 425 FKKEQNMMEEIVKNIAIIDDKENSQNITDIDLQQRIALKSDLLKLNLNEARKWSQLCKLK 484
             K +   +  +K I +ID  E   + T+I  ++RIALK+DL ++ L EA+ W+Q CK  
Sbjct: 441 KGKNEASKKAWIKEIDLIDKLEAEGSATEIHREKRIALKADLSQITLTEAQIWAQKCKRI 500

Query: 485 WLMEGDENTAYFHKICLARRRFNFISEIQDGQNIAQCSDSGIEKAFIDHFNEVFQNAPHE 544
           W+ EGDEN+++FHKIC AR++   IS+I +       +DS I  AFI HF E++ +  + 
Sbjct: 501 WVHEGDENSSFFHKICTARQKKCLISKIINNSGQNCLNDSDIADAFIQHFEEIYTDNRNS 560

Query: 545 KWLIGNLNWRPITEAQATSLVLPFTEAEVLSKVNLLGNNKTPGPDGFTIEFFKKFWNIFS 604
              I NL+W PI+   +  L  PF EAE+   +     NK PGPDG+T++F +K W+   
Sbjct: 561 HLFIDNLDWCPISNTNSDLLDKPFNEAEIWLTLKSFAKNKAPGPDGYTMDFLQKSWSFMK 620

Query: 605 GDIMKLFHDFFLNKIINKAMNTTYIALIPKRSHCTKVSDYRPISLTTSMYKILAKVLSEG 619
            +I  +F DF     INK +N T I LI K+ +C  V+D+RPISLTT++YK++AK L++ 
Sbjct: 621 QNICDIFKDFHSTHTINKVVNETLITLIAKKENCETVADFRPISLTTAIYKLIAKALADR 669

[Close]

BLAST of CmUC06G126650 vs. ExPASy TrEMBL
Match: A0A5A7T9I7 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00980 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 8.2e-104
Identity = 188/431 (43.62%), Postives = 266/431 (61.72%), Query Frame = 0


Query: 188 SVYGPASRRNRIDFWNELYLLKDFCGPNWMLGGDFNVYRWSHETTSTNPSRYCMGKFNSF 247
           ++YGPA R+NR  FW EL  LK  C P W+LGGDFNV RW  ETT+ NP+   M +FNSF
Sbjct: 35  AIYGPAKRKNRPLFWEELEHLKSICLPTWILGGDFNVIRWKEETTTKNPALLSMRRFNSF 94

Query: 248 IETANLSEPAHSNGVFTWSNLRSSPSMSKLDRFLHTEGWERKFKIHQVQRLNRIISDHYP 307
           I   NL +P  SN  +TWSNLR+  ++S+LDRFL T  WE  F  H  + L R  SDH+P
Sbjct: 95  ISNCNLIDPPLSNAKYTWSNLRAQATLSRLDRFLFTSQWENIFPGHTSKVLTRTTSDHFP 154

Query: 308 ILLLSDSLRWGPCPFKFDNRWLSHKYLNKEVELGWSYRQQQGHSGHVFMKNMKILSSKVK 367
           I+L S ++ WGP PF+F N +L      K +E  W    Q G++G+ FM+ +K L+  +K
Sbjct: 155 IVLESSTISWGPSPFRFTNAYLKDPDYKKNIEFWWGNTSQPGYAGYSFMRRLKQLALIIK 214

Query: 368 AWNIDTFKKEQNMMEEIVKNIAIIDDKENSQNITDIDLQQRIALKSDLLKLNLNEARKWS 427
            W  D   K +   +  +K I  ID  E   + T+I  ++R ALK+DL ++NL EA+ W+
Sbjct: 215 TWGRDKKGKNEASKKACIKEIDQIDKLEAEGSATEIHREKRTALKADLSQINLTEAQIWA 274

Query: 428 QLCKLKWLMEGDENTAYFHKICLARRRFNFISEIQDGQNIAQCSDSGIEKAFIDHFNEVF 487
           Q CK  W+ EGDEN+++FHKIC AR++   IS+I +       +DS I  AFI HF +++
Sbjct: 275 QKCKRIWVHEGDENSSFFHKICTARQKKCLISKIINNSGQNCLNDSDIADAFIQHFEDIY 334

Query: 488 QNAPHEKWLIGNLNWRPITEAQATSLVLPFTEAEVLSKVNLLGNNKTPGPDGFTIEFFKK 547
            +  + +  I NL+W PI+   +  L  PF EAE+   +     NK PGPDG+ ++F +K
Sbjct: 335 TDNRNSQLFIENLDWCPISNINSELLDKPFNEAEIWLTLKSFAKNKAPGPDGYAMDFLQK 394

Query: 548 FWNIFSGDIMKLFHDFFLNKIINKAMNTTYIALIPKRSHCTKVSDYRPISLTTSMYKILA 607
            W+    +I  +F DF    IINK +N T I LI K+ HC   +D+RPISLTT++YK++A
Sbjct: 395 SWSFMKQNICDIFKDFHSTHIINKVVNETLITLIAKKEHCETAADFRPISLTTAIYKLIA 454

Query: 608 KVLSEGLKRLL 619
           K L++ LK+ L
Sbjct: 455 KTLADRLKQTL 465

[Close]

BLAST of CmUC06G126650 vs. ExPASy TrEMBL
Match: A0A5A7TAQ1 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00050 PE=4 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 1.4e-103
Identity = 194/432 (44.91%), Postives = 266/432 (61.57%), Query Frame = 0


Query: 188 SVYGPASRRNRIDFWNELYLLKDFCGPNWMLGGDFNVYRWSHETTSTNPSRYCMGKFNSF 247
           ++YGP+  RNR  FW EL  LK+ C P W+L GDFNV R+S ET++ NPS++ M  FN F
Sbjct: 38  AIYGPSGGRNRKSFWAELLDLKNKCSPTWLLAGDFNVVRFSSETSTQNPSKHSMRCFNKF 97

Query: 248 IETANLSEPAHSNGVFTWSNLRSSPSMSKLDRFLHTEGWERKFKIHQVQRLNRIISDHYP 307
           I  +NL +P  SN  FTWSNLR  P +S++DRFL+T  WE  F  H  + L+R+ SDH+P
Sbjct: 98  ISDSNLIDPPLSNAKFTWSNLRVQPVLSRIDRFLYTTNWENLFTAHYSKTLSRVTSDHFP 157

Query: 308 ILLLSDSLRWGPCPFKFDNRWLSHKYLNKEVELGWSYRQQQGHSGHVFMKNMKILSSKVK 367
           I L S  + WGP PFK  N  L   +L K V   W   +Q+GH G  FM+ +K LS+ ++
Sbjct: 158 IALESSMISWGPSPFKLINVHLKESWLKKNVTYWWKNLRQEGHPGFSFMRKLKQLSAIIR 217

Query: 368 AWNIDTFKKEQNMMEEIVKNIAIIDDKENSQNITDIDLQQRIALKSDLLKLNLNEARKWS 427
                            +K I  ID  E   N+++    +R  LK+D+L     EA+ W 
Sbjct: 218 NEQRKNKCYSDEDKNAWIKEIDNIDRLEAEGNLSEELSLRRTRLKADVLMSGFKEAQIWY 277

Query: 428 QLCKLKWLMEGDENTAYFHKICLARRRFNFISEIQDGQNIAQCSDSGIEKAFIDHFNEVF 487
           Q  K  W+ EGDENT++FHKIC AR+R + IS I     +   ++  I KAF+DHF +++
Sbjct: 278 QKSKRLWITEGDENTSFFHKICSARQRRSIISNINSVDGVPCSTNESIAKAFLDHFEDIY 337

Query: 488 QNAPHEK-WLIGNLNWRPITEAQATSLVLPFTEAEVLSKVNLLGNNKTPGPDGFTIEFFK 547
           +    E  WLI NL+W PI+  QA +L   FTE E+ + +    NNK+PGPDGFT+EF+K
Sbjct: 338 KGGGEESPWLIDNLSWSPISTTQAQNLCSLFTEEEIHAALTAFSNNKSPGPDGFTMEFYK 397

Query: 548 KFWNIFSGDIMKLFHDFFLNKIINKAMNTTYIALIPKRSHCTKVSDYRPISLTTSMYKIL 607
             W+    +I+ +F DF  N IINKA+N T IALI K+  C + +DYRPISLTTS+YK++
Sbjct: 398 STWSDLKEEILNIFRDFHSNCIINKAVNITNIALIAKKEKCAESADYRPISLTTSIYKLI 457

Query: 608 AKVLSEGLKRLL 619
           AKV++E LK  L
Sbjct: 458 AKVIAERLKETL 469

[Close]

BLAST of CmUC06G126650 vs. ExPASy TrEMBL
Match: A0A5D3BJP3 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G005410 PE=4 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 4.1e-103
Identity = 191/433 (44.11%), Postives = 271/433 (62.59%), Query Frame = 0


Query: 188 SVYGPASRRNRIDFWNELYLLKDFCGPNWMLGGDFNVYRWSHETTSTNPSRYCMGKFNSF 247
           ++YGPA R+NR  FW EL  LK  C P W+LGGDFNV RW  ET++ NP+   M +FN+F
Sbjct: 35  AIYGPAKRKNRPLFWEELENLKSICFPTWILGGDFNVIRWKEETSTKNPASLSMKRFNTF 94

Query: 248 IETANLSEPAHSNGVFTWSNLRSSPSMSKLDRFLHTEGWERKFKIHQVQRLNRIISDHYP 307
           I   NL +P  +N  FTWSNLR+  ++S+LDRFL +  WE  F  H  + L R  SDH+P
Sbjct: 95  ISNCNLIDPPLTNAKFTWSNLRAQATLSRLDRFLFSTQWENIFPGHTSKVLTRTTSDHFP 154

Query: 308 ILLLSDSLRWGPCPFKFDNRWLSHKYLNKEVELGWSYRQQQGHSGHVFMKNMKILSSKVK 367
           I+L S S+ WGP PF+F N +L      + +E  W    Q G +G+ FM  +K L+ K+K
Sbjct: 155 IVLESSSISWGPSPFRFTNAYLKDPDYKRNIEFWWGNTSQPGFAGYSFMHRLKQLAMKIK 214

Query: 368 AWNIDTFKKEQNMMEEIVKNIAIIDDKENSQNITDIDLQQRIALKSDLLKLNLNEARKWS 427
           AW  +   K++   +  +K I +I+  E     T+I  ++RIALK+DL ++ L EA+ W+
Sbjct: 215 AWGREKKGKDEASKKAWIKEIDLINKLEAEGTSTEIHREKRIALKADLSQITLTEAQIWA 274

Query: 428 QLCKLKWLMEGDENTAYFHKICLARRRFNFISEIQD--GQNIAQCSDSGIEKAFIDHFNE 487
           Q CK  W+ EGDEN+++FHKIC AR++   IS+I +  GQN    +DS I  AFI HF E
Sbjct: 275 QKCKRIWVHEGDENSSFFHKICTARQKKCLISKIINICGQNC--LNDSDIVDAFIQHFEE 334

Query: 488 VFQNAPHEKWLIGNLNWRPITEAQATSLVLPFTEAEVLSKVNLLGNNKTPGPDGFTIEFF 547
           ++ +  +    I NL+W PI+   +  L  PF EAE+   +     NK PGPDGFT++F 
Sbjct: 335 IYTDNRNSHLFIDNLDWCPISNTNSGLLDKPFNEAEIWLTLKSFAKNKAPGPDGFTMDFL 394

Query: 548 KKFWNIFSGDIMKLFHDFFLNKIINKAMNTTYIALIPKRSHCTKVSDYRPISLTTSMYKI 607
           +K W+    +I  +F DF  N  INK +N T I  I K+ +C  V+D+RPISLTT++YK+
Sbjct: 395 QKSWSFMKQNICDIFKDFHSNHTINKVVNETLITFIAKKENCETVADFRPISLTTAIYKL 454

Query: 608 LAKVLSEGLKRLL 619
           +AKVL++ LK+ L
Sbjct: 455 IAKVLADRLKQTL 465

[Close]

BLAST of CmUC06G126650 vs. ExPASy TrEMBL
Match: A0A5A7US62 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold280G003960 PE=4 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.0e-97
Identity = 180/431 (41.76%), Postives = 254/431 (58.93%), Query Frame = 0


Query: 188  SVYGPASRRNRIDFWNELYLLKDFCGPNWMLGGDFNVYRWSHETTSTNPSRYCMGKFNSF 247
            SVYGP    +R   W EL +L+  C PNW++ GDFN+ RW  ET + +  +  M  FN+F
Sbjct: 715  SVYGPYKYNDRTKLWPELEILQSLCLPNWLIAGDFNIVRWERETNAKSLDKRNMANFNNF 774

Query: 248  IETANLSEPAHSNGVFTWSNLRSSPSMSKLDRFLHTEGWERKFKIHQVQRLNRIISDHYP 307
            I    L +P   N  FTWSNLR +P+ S+LDRFL ++GWE  F +H  + L R ISDH+P
Sbjct: 775  ISVNELIDPPPLNNNFTWSNLRVNPTYSRLDRFLLSKGWENAFGLHTSRTLERNISDHFP 834

Query: 308  ILLLSDSLRWGPCPFKFDNRWLSHKYLNKEVELGWSYRQQQGHSGHVFMKNMKILSSKVK 367
            ILL S  ++WGPCPF+ +N  L  K   K     W+  +Q G  G+ F++++  LS  +K
Sbjct: 835  ILLESPQIKWGPCPFRLNNSSLRDKEFQKNFINWWNSSKQAGFPGYAFIQSLNSLSKFIK 894

Query: 368  AWNIDTFKKEQNMMEEIVKNIAIIDDKENSQNITDIDLQQRIALKSDLLKLNLNEARKWS 427
             W  +         + ++K I IID  E    ++    Q+RI+LKSDLL +  N+A+ W 
Sbjct: 895  EWQHNKVNLYDANKKALLKEIDIIDKLEFQGEMSTTHHQKRISLKSDLLSIENNQAQIWH 954

Query: 428  QLCKLKWLMEGDENTAYFHKICLARRRFNFISEIQDGQNIAQCSDSGIEKAFIDHFNEVF 487
            Q  + +W + GDEN +YFH+IC   +R N I  I D    +  S   I + FI HF  ++
Sbjct: 955  QRARQRWNLLGDENNSYFHRICTINQRKNLIKSICDPAGTSLDSIDDISRTFISHFQNIY 1014

Query: 488  QNAPHEKWLIGNLNWRPITEAQATSLVLPFTEAEVLSKVNLLGNNKTPGPDGFTIEFFKK 547
                +E+ LI NL+W PI+    + L  PF E+E+ S +    N K PGPDG+T+ F+KK
Sbjct: 1015 TKESYEEILIDNLSWNPISRLCQSELCKPFDESEIKSTIMSFSNEKAPGPDGYTMLFYKK 1074

Query: 548  FWNIFSGDIMKLFHDFFLNKIINKAMNTTYIALIPKRSHCTKVSDYRPISLTTSMYKILA 607
             W     D++ +F DF    I+N  +N T+IALI K+  C+K SDYRPISLTTS+YKI+A
Sbjct: 1075 HWPDLKDDLLNVFKDFHKAGIVNNNVNNTFIALISKKEKCSKPSDYRPISLTTSLYKIMA 1134

Query: 608  KVLSEGLKRLL 619
            K L+  LK  L
Sbjct: 1135 KALANRLKSAL 1145

[Close]

BLAST of CmUC06G126650 vs. TAIR 10
Match: AT1G43760.1 (DNAse I-like superfamily protein )

HSP 1 Score: 105.9 bits (263), Expect = 1.2e-22
Identity = 88/360 (24.44%), Postives = 162/360 (45.00%), Query Frame = 0


Query: 259 SNGV-FTWSNLR-SSPSMSKLDRFLHTEGWERKFKIHQVQRLNRIISDHYPILLLSDSL- 318
           S GV +TWSN +  +P + KLDR +    W   F           +SDH P +++ ++L 
Sbjct: 266 SRGVHYTWSNHQDDNPIIRKLDRAIANGDWFSSFPSAIAVFELSGVSDHSPCIIILENLP 325

Query: 319 -RWGPCPFKFDNRWLSHKYLNKEVELGWSYRQQQGHSGHVFMKNMKILSSKVKAWNIDTF 378
            R   C F++ +   +H      + + W  +   G       +++K      K  N   F
Sbjct: 326 KRSKKC-FRYFSFLSTHPTFLVSLTVAWEEQIPVGSHMFSLGEHLKAAKKCCKLLNRQGF 385

Query: 379 KKEQNMMEEIVKNIAIIDDKENSQNITDIDLQQRIALKSDLLKLNLNEARK---WSQLCK 438
              Q+  +E + ++  I  +  +     +   + +A K    K N   A     + Q  +
Sbjct: 386 GNIQHKTKEALDSLESIQSQLLTNPSDSLFRVEHVARK----KWNFFAAALESFYRQKSR 445

Query: 439 LKWLMEGDENTAYFHKICLARRRFNFISEIQDGQNIAQCSDSGIEKAFIDHFNEVFQN-- 498
           +KWL +GD NT +FHK+ LA +  N I  ++   ++   + + +++  + ++  +  +  
Sbjct: 446 IKWLQDGDANTRFFHKVILANQAKNLIKFLRMDDDVRVENVTQVKEMIVAYYTHLLGSDS 505

Query: 499 ---APHEKWLIGNLNWRPITEAQATSLVLPFTEAEVLSKVNLLGNNKTPGPDGFTIEFFK 558
               P     I +++     +  A+ L    ++ E+ + V  +  NK PGPD FT EFF 
Sbjct: 506 DILTPDSVQRIKDIHPFRCNDTLASRLSALPSDKEITAAVFAMPRNKAPGPDSFTAEFFW 565

Query: 559 KFWNIFSGDIMKLFHDFFLNKIINKAMNTTYIALIPKRSHCTKVSDYRPISLTTSMYKIL 607
           + W +     +    +FF    + K  N T I LIPK +   ++S +RP+S  T +YKI+
Sbjct: 566 ESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITLIPKVTGVDQLSMFRPVSCCTVVYKII 620

The following BLAST results are available for this feature:

BLAST of CmUC06G126650 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK29577.1	6.9e-105	35.64	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
KAA0039950.1	1.7e-103	43.62	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK245...	[more]
KAA0040038.1	2.9e-103	44.91	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
TYJ99326.1	8.4e-103	44.11	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]
TYK08190.1	4.0e-97	41.76	LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]	[more]

BLAST of CmUC06G126650 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O00370	1.4e-12	22.31	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1	[more]
P11369	5.4e-12	21.55	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE...	[more]
P14381	7.1e-12	32.50	Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV...	[more]
P08548	1.0e-10	21.89	LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1	[more]

BLAST of CmUC06G126650 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E0F6	3.3e-105	35.64	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7T9I7	8.2e-104	43.62	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7TAQ1	1.4e-103	44.91	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5D3BJP3	4.1e-103	44.11	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A5A7US62	2.0e-97	41.76	LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119...	[more]

BLAST of CmUC06G126650 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G43760.1	1.2e-22	24.44	DNAse I-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	GENE3D	3.60.10.10	Endonuclease/exonuclease/phosphatase	coord: 154..311 e-value: 7.6E-17 score: 63.8
IPR036691	Endonuclease/exonuclease/phosphatase superfamily	SUPERFAMILY	56219	DNase I-like	coord: 188..310
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..54
None	No IPR available	PANTHER	PTHR33116:SF38	OS01G0158850 PROTEIN	coord: 264..616
None	No IPR available	PANTHER	PTHR33116	REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATED	coord: 264..616

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC06G126650.1	CmUC06G126650.1	mRNA