CmUC06G123180 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC06G123180
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr06: 26750674 .. 26751057 (+)
RNA-Seq Expression	CmUC06G123180
Synteny	CmUC06G123180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGGGAAAAGAGAAAGGGGCGGCCGGAGAACAGCGGCGGAATTTATGAAAAGAAAATCAAGAAGGACGAGACAGCGGCCGCCATGGCGGAGGAGCCGACCGACGAGGAGGTGGAAGAGTTCTATTTGATACTGCGGCGGATGAAGCAAGCGGCGGAGTATTTTGGAGTGGAAAAGGGGATGTTGGCGAAGAGTTTGAGTGTGGTGGTTGCAGGGGCGGCGGATCGGGGAGAGAAAGAGGAGGAGGAGAAGGGACCGGACACGGTGGCTCCGGCACCGGCGGAGGTGAAACCGCGTGGGAAGGAAAAGGAAGTGGTGGAGGAAAATGGGTTGCCGTTGGATTTGAATATAGCGGTGGCTGTACCGGTGATCGATATTTGA

mRNA sequence

ATGGGAAGGGAAAAGAGAAAGGGGCGGCCGGAGAACAGCGGCGGAATTTATGAAAAGAAAATCAAGAAGGACGAGACAGCGGCCGCCATGGCGGAGGAGCCGACCGACGAGGAGGTGGAAGAGTTCTATTTGATACTGCGGCGGATGAAGCAAGCGGCGGAGTATTTTGGAGTGGAAAAGGGGATGTTGGCGAAGAGTTTGAGTGTGGTGGTTGCAGGGGCGGCGGATCGGGGAGAGAAAGAGGAGGAGGAGAAGGGACCGGACACGGTGGCTCCGGCACCGGCGGAGGTGAAACCGCGTGGGAAGGAAAAGGAAGTGGTGGAGGAAAATGGGTTGCCGTTGGATTTGAATATAGCGGTGGCTGTACCGGTGATCGATATTTGA

Coding sequence (CDS)

ATGGGAAGGGAAAAGAGAAAGGGGCGGCCGGAGAACAGCGGCGGAATTTATGAAAAGAAAATCAAGAAGGACGAGACAGCGGCCGCCATGGCGGAGGAGCCGACCGACGAGGAGGTGGAAGAGTTCTATTTGATACTGCGGCGGATGAAGCAAGCGGCGGAGTATTTTGGAGTGGAAAAGGGGATGTTGGCGAAGAGTTTGAGTGTGGTGGTTGCAGGGGCGGCGGATCGGGGAGAGAAAGAGGAGGAGGAGAAGGGACCGGACACGGTGGCTCCGGCACCGGCGGAGGTGAAACCGCGTGGGAAGGAAAAGGAAGTGGTGGAGGAAAATGGGTTGCCGTTGGATTTGAATATAGCGGTGGCTGTACCGGTGATCGATATTTGA

Protein sequence

MGREKRKGRPENSGGIYEKKIKKDETAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVEKGMLAKSLSVVVAGAADRGEKEEEEKGPDTVAPAPAEVKPRGKEKEVVEENGLPLDLNIAVAVPVIDI

Homology

[Close]

BLAST of CmUC06G123180 vs. NCBI nr
Match: KAE8652459.1 (hypothetical protein Csa_013196 [Cucumis sativus])

HSP 1 Score: 154.1 bits (388), Expect = 8.3e-34
Identity = 90/130 (69.23%), Postives = 100/130 (76.92%), Query Frame = 0


Query: 1   MGREKRKGRPENSGGIYEKKIKKDETAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVEK 60
           MG+EKRK + EN   I+EKK K D+T    AEEPTDEEVEEFY+ILRRMKQ AEYFGVE+
Sbjct: 1   MGKEKRKRQMENRAEIHEKKTKNDDTPTPAAEEPTDEEVEEFYMILRRMKQMAEYFGVER 60

Query: 61  GMLAKSLSVVVAGAADRGEK----EEEEKGPDTVAPAPAEVKPRGKEKEVVEENGLPLDL 120
           GMLAKSLS VVA AAD+ EK    EEE+KG    AP+PAEV  RGK KEVVEENGL LDL
Sbjct: 61  GMLAKSLSAVVAAAADQQEKKEEEEEEKKGLSMAAPSPAEVSRRGKGKEVVEENGLRLDL 120

Query: 121 NIAVAVPVID 127
           NIA+AV   D
Sbjct: 121 NIALAVQQSD 130

[Close]

BLAST of CmUC06G123180 vs. NCBI nr
Match: KAA0058070.1 (hypothetical protein E6C27_scaffold274G003770 [Cucumis melo var. makuwa])

HSP 1 Score: 145.2 bits (365), Expect = 3.8e-31
Identity = 88/125 (70.40%), Postives = 101/125 (80.80%), Query Frame = 0


Query: 1   MGREKRKGRPENSGGIYEKKIKKDE-TAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVE 60
           MG+EKRK + E+   I+EKK + D+ TA+  AEEPTDEEVEEFY+ILRRMKQ AEYFGVE
Sbjct: 1   MGKEKRKRQLESRVPIHEKKTENDDSTASPAAEEPTDEEVEEFYMILRRMKQMAEYFGVE 60

Query: 61  KGMLAKSLSVVVAGAADRGEKEEEEKGPDTVAPAPAEVKPRGK-EKEVVEENGLP-LDLN 120
           +GML KSLS VVA AA++ EK+EEEKG  T APAPAE   RGK +KEVVEENGL  LDLN
Sbjct: 61  RGMLTKSLSAVVAAAANQQEKKEEEKGLSTAAPAPAEANQRGKDQKEVVEENGLRLLDLN 120

Query: 121 IAVAV 123
           IAVAV
Sbjct: 121 IAVAV 125

[Close]

BLAST of CmUC06G123180 vs. NCBI nr
Match: TYK28420.1 (hypothetical protein E5676_scaffold629G00500 [Cucumis melo var. makuwa])

HSP 1 Score: 145.2 bits (365), Expect = 3.8e-31
Identity = 88/125 (70.40%), Postives = 101/125 (80.80%), Query Frame = 0


Query: 1   MGREKRKGRPENSGGIYEKKIKKDE-TAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVE 60
           MG+EKRK + E+   I+EKK + D+ TA+  AEEPTDEEVEEFY+ILRRMKQ AEYFGVE
Sbjct: 1   MGKEKRKRQLESRVRIHEKKTENDDSTASPAAEEPTDEEVEEFYMILRRMKQMAEYFGVE 60

Query: 61  KGMLAKSLSVVVAGAADRGEKEEEEKGPDTVAPAPAEVKPRGK-EKEVVEENGLP-LDLN 120
           +GML KSLS VVA AA++ EK+EEEKG  T APAPAE   RGK +KEVVEENGL  LDLN
Sbjct: 61  RGMLTKSLSAVVAAAANQQEKKEEEKGLSTAAPAPAEANQRGKDQKEVVEENGLRLLDLN 120

Query: 121 IAVAV 123
           IAVAV
Sbjct: 121 IAVAV 125

[Close]

BLAST of CmUC06G123180 vs. NCBI nr
Match: KAG6589551.1 (hypothetical protein SDJN03_14974, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 133.3 bits (334), Expect = 1.5e-27
Identity = 83/124 (66.94%), Postives = 88/124 (70.97%), Query Frame = 0


Query: 1   MGREKRKGRPENSGGIYEKKIKKDETAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVEK 60
           M R KRK + EN G   EKK K DET AA  +EPTDEEVEEFY ILRRMK+AAEYFGVEK
Sbjct: 1   MVRGKRKCQSENDGKFCEKKTKNDETTAAAEKEPTDEEVEEFYSILRRMKRAAEYFGVEK 60

Query: 61  GMLAKSLSVVVAGAADRGEKEEEEKGPDTVAPAP--AEVKPRGKEKEVVEENGLPLDLNI 120
           GML KSL  V A AADR EKEEE+KG          A +K  GK KEVV ENGL LDLNI
Sbjct: 61  GMLTKSLRDVAAAAADREEKEEEKKGVKRAEAETDVARMKQGGKGKEVVAENGLRLDLNI 120

Query: 121 AVAV 123
           AVAV
Sbjct: 121 AVAV 124

[Close]

BLAST of CmUC06G123180 vs. ExPASy TrEMBL
Match: A0A5D3DYW7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold629G00500 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.9e-31
Identity = 88/125 (70.40%), Postives = 101/125 (80.80%), Query Frame = 0


Query: 1   MGREKRKGRPENSGGIYEKKIKKDE-TAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVE 60
           MG+EKRK + E+   I+EKK + D+ TA+  AEEPTDEEVEEFY+ILRRMKQ AEYFGVE
Sbjct: 1   MGKEKRKRQLESRVRIHEKKTENDDSTASPAAEEPTDEEVEEFYMILRRMKQMAEYFGVE 60

Query: 61  KGMLAKSLSVVVAGAADRGEKEEEEKGPDTVAPAPAEVKPRGK-EKEVVEENGLP-LDLN 120
           +GML KSLS VVA AA++ EK+EEEKG  T APAPAE   RGK +KEVVEENGL  LDLN
Sbjct: 61  RGMLTKSLSAVVAAAANQQEKKEEEKGLSTAAPAPAEANQRGKDQKEVVEENGLRLLDLN 120

Query: 121 IAVAV 123
           IAVAV
Sbjct: 121 IAVAV 125

[Close]

BLAST of CmUC06G123180 vs. ExPASy TrEMBL
Match: A0A5A7USD1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G003770 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 1.9e-31
Identity = 88/125 (70.40%), Postives = 101/125 (80.80%), Query Frame = 0


Query: 1   MGREKRKGRPENSGGIYEKKIKKDE-TAAAMAEEPTDEEVEEFYLILRRMKQAAEYFGVE 60
           MG+EKRK + E+   I+EKK + D+ TA+  AEEPTDEEVEEFY+ILRRMKQ AEYFGVE
Sbjct: 1   MGKEKRKRQLESRVPIHEKKTENDDSTASPAAEEPTDEEVEEFYMILRRMKQMAEYFGVE 60

Query: 61  KGMLAKSLSVVVAGAADRGEKEEEEKGPDTVAPAPAEVKPRGK-EKEVVEENGLP-LDLN 120
           +GML KSLS VVA AA++ EK+EEEKG  T APAPAE   RGK +KEVVEENGL  LDLN
Sbjct: 61  RGMLTKSLSAVVAAAANQQEKKEEEKGLSTAAPAPAEANQRGKDQKEVVEENGLRLLDLN 120

Query: 121 IAVAV 123
           IAVAV
Sbjct: 121 IAVAV 125

The following BLAST results are available for this feature:

BLAST of CmUC06G123180 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8652459.1	8.3e-34	69.23	hypothetical protein Csa_013196 [Cucumis sativus]	[more]
KAA0058070.1	3.8e-31	70.40	hypothetical protein E6C27_scaffold274G003770 [Cucumis melo var. makuwa]	[more]
TYK28420.1	3.8e-31	70.40	hypothetical protein E5676_scaffold629G00500 [Cucumis melo var. makuwa]	[more]
KAG6589551.1	1.5e-27	66.94	hypothetical protein SDJN03_14974, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CmUC06G123180 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC06G123180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DYW7	1.9e-31	70.40	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7USD1	1.9e-31	70.40	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of CmUC06G123180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..103
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..89
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
IPR034577	Protein NIM1-INTERACTING 2	PANTHER	PTHR35735	PROTEIN NIM1-INTERACTING 2	coord: 1..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC06G123180.1	CmUC06G123180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010112	regulation of systemic acquired resistance