CmUC06G122420 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC06G122420
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	tRNA pseudouridine synthase
Location	CmU531Chr06: 26020109 .. 26025013 (-)
RNA-Seq Expression	CmUC06G122420
Synteny	CmUC06G122420

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATACCAAATCCAAGAGCTAGACTTGTATCACCATCAGGTGCCAATTTTGGCTTCAAGATTCTGATGGAGAATCGAGCTCAGCAAAAAGACTATCTTCACTATAACCACACTGATCGCTGCAGAAATGCTAGATGGACTGCCAGGTTTTTCTTTCGTACATCTTCATTATCTATGGCTTTATTAGATTAGAGATTTTACTCCTGGAATCAGCTTTGTGCTTGGTTGTTATTGTAATCCAATCTGAATCTGAGAAGGCTGTTAATCAAGCTGTTGTTATTCTTTTGGCAGGGAAAGCTACCAACTCATGTATGGAAGGCCGTGGCAAGAAGTGCTTGATTTTTACTTTCATGCTGTTAATGGAAGGTTCTCACTGACCTCGTTGTTTGGAACTGAGGCGAGTCTCCAATATCTACATTATCTTTAAACTTCGTTCCTCATTCTCTATAATTATTCCGTTTGTTAAAATGTAAGCAATTGAATCGTGAACTACGACTCCTTTTCCCTCCCTTGCGAGCTTACGAATCCTTCTCTCTTGTAATGCTAAGAGCAGTCTTTATATATCTTAAGCCGCTTTCGTCATACTGTTATAGTTAAGGAATCTTATTTTTTTCTGTTCAGGTTCTTTGATTCTTAAAATAATGGCTTCCATCTAAGACTGCCAATTGCTTTAACATTGTACCGTGTAGGTTCTAAATTTAGCTTGACTTCTCAGTTCTGGAGATGATTTTTAATCAAATGCTTGCTGTCAGTTGTTACATTTGATTTATTGATCCGGTTCATGTGTGTATATATATATATATATATAAACATTGGTTGATTCAAATTAGGAGAAATGAGGATAAATTTTTTGTTCTACAATTATCTTGTACAAAACAAGGAGATATCGTTGATTTTTTTAATTTATTGTATATGATACTTTACCCACAGATAGGTCTTGATCATGATGATGCTGAGACTCCAGCGATTTACAACACAGCAGAGTTAAACAGAGCTTCATTCAAAGATAAGGCTGGGAGGTGGGCAAGGGCAACATTTAAGATTGTTCTTTCCTACCATGGAAATTCCTTTGATGGGTGGCAAAAGCAGCCAGGCTTGAATACTGTTCAGGGGTAAGCTTATTTCATGGAAGTTACCATATAGACAAGTGATATTGTATGCAATTGGGAGTGACGTTCTTTTCACTATCAGATCTTTTAAACTGAAGAATTGTTGAGAACTTGTAATTTATAGTAAGCGTTGGAGAAGTTAGTTCTAGAGATACAAGTGAAAATCTCATGCCTTCATTTCAAATGAAACCTTTGTCTTGTGGACAATGTCCAAATTAAGTCAATTGACCTTGTTAATCTCACCTTTCTGGTACTGTATCTTCTTCTTCGAGTGTAATAGTTTAAAGCAATGTTTTAATATCTTTAGATGTATAAATAGTTTGATTTCAAAAATTGCTGTATATTGGAGGATTATGTCTACTTGTATCCTTTGGCAGCTTGGTAGAAAAATCTCTAGGGAAGTTTGTAGATGAGAAGAAAGCTCAGATGCTGAAAGATAGATGCTTACCAATAGAAGGATGTGCTGTGGTTGCTGGGCGAACTGACAAAGGGGTCACAGCTCTGCGACAAGTTTGCTCATTCTGTATGTTGGCTTTCTAATTTCTGTTGACATGATTTTTTGATTGGATATTTAATTTCACAACTCTGCTTTCATTTTCTTAGATTCTATCTCAGCTCAAAAATGAACTCTTCTATTAGAATAAATTATATCTTTTATATTATTTCTTGACATCTTTGATAGTTGCAATGAATAGCCTACCCATTAATTGCTTGTGACGTCCGTTTCATGAAATCCACTTTTGTTGTGCTTCACTTAAACACTCAAATAGTCAAATAGGTGACTTTGTCCCGACTGACCTATGCTCGAAGTGTTGGAAGGGTATGCCAAAAGAGCTGTCAAAAGCAATTAGTATTGAAACAAGGGTGGTGTGAAGTCTATATTTAATATTATCACAACTCTTTTATTGATTAAATTCTCATGAACATTTTCCTTTTTAACCAAACAGTAGGAGGTACCACACTGGAACTAAACCCAGGAATAACTTCGCAATAAAAAGTAGCAAGAGTAAAAAAATTTGTACTTCACACACTATATATTTTTTTTGGATAAGATGCACACTGTATTTTTTAAGGCAAATCTTTAGAAGCTTTGACCAACTACCCATCACTGATTATTAATTCAAGTAGTTCTGCAGCATGGAAGTTGGGAGTGCATTTCTTTTTATTACCATTGCAGAATTCCTTATCTGATGCTACAGAAAGGAAAAGTTGGCGAAGAAGATTGAAGTTTTTATTTGAACTATTTCCAATCTGTGCCTTTATACCAATAGTAGAATTCAAGTTAGACATCCAAACTACTCGGCCATCACAGTACCAATAATAGAATTCAACCTGAACCATGCTTCCTTTGGTTTGAGTTCTTTAACATAAATATATACATGAAACTTGTTTAGAAAGAGCAATTATATGTGTAGTTTTTTTAGTTTTTTCTGTTTCTTTTCATCTTTAGTTTCAAATTACCCTTGGAGCGAAACATCCTCTTTCTGACTTCACCCACTTAATTTTTATTATTGTTTTGTATTTTAGAGAATCAATATTCGACTTCAGTTAAACTCCCTACTTGTAGATACTTGGCGCACCGATGTTAAACCTCAAGACATTGAAGATTCTATCAATAGTGCAGCTCCTGGAAAACTCAGAACATTATCTGTTTCTCAGGTAAAATTAAGGTTTTTGAAAATTAATGTGGTCCCCGTGTCTAGCTTTAATTGTGTTGCAGATGTAACTTGTTTATTTCTCTTTCGTACATGTAACTTCTCAAATTATTTACTGCTGTAGGTGTCTCGTATCTTCCATCCAAATTTCTCTGCTAAATGGAGGCGATATCTGTATATTTTTCCTCTGAATGATGGAGAGAACATGGAGCCAGATTTTGCAATTTGGGAAGATGTAGAAAACTGTAGAGAACAGGAAAATTATGATAAAATAGAAGTCTTAAATGGTGAAGAATGCAAGAACGAGATTCATGATAATTTGGTCCTCGGTCCAAATGATGAGGAGCTTGTGTCGACTGATAAACCTAAAATGTTTAGTATAAGGAGGGTTAACCAACTACTTAGGAAACTAGAAGGGAAGTTATTGTCGTACAAGATTTTTGCACGTGACACCAAAGCATCAAGAAATGAGTGAGAATCATGAATTGATCCAATTATTGCCTTTTCTTTTGGTAGTTATTCTAGCTTCTAATTTTAGTATCATAATTCTTTTTGTTTTTTTTTTTTTTTTTAATTATGTTTATTTCTTTCTGCTCATAAAGATCCTTTTTTAAAAAAAAATTGTCAATATGAGATTAATGTGCTTGCTTGAAGCTTTCTTTTTCCCAAACGTTTTCTTTTCAATGACAGGAAGATGTTCTAAACTTTCTGACATGTACTAATTGCAATTACCGTCCTTTTCAGAGGTCCACCTACGGAATGTTTTGTTTACCATGCACGAGCAGCAGAAGCTAGATTACCATGCTTGGTATTTTTCCTATTTGTAGTCCTCTTCTTGCTCTCATCCTCCTTTTCTTTGATTATCCTTTTCCTTCTACATTTCTCTCCTATTGAAATCTATCTGTAGTGTGGTAACTGTAAAACAATATTCTATACTCTATAGCTCACATACACTGGAAAGAGGTAGAACCAGGTTATTTGGATTGTGTTTTTTACTGATTCAGAACATAGAAAACAGAAGATGAATTTGTGGAAGAGTATGAACCGAGGAAACATAGAAGAAATTTACTTTGACATTATATCTTCAGGGTGAAGTATTTGAATAGCAAACTAGCTGTAGTATGTGCTTCATTCAATGAATATTCAAATTTTATTCACAACGGTTGCTCTTGCTCTCTCTTCTGTTCTCTTCTTGTTTGTTTTTATATCCTAATCTTCTCTCTCTCTCTCTGTCAGAAGAGGTTGTTTTCCTCATGTTTTTGAAGAGTTTTGTTTCTTAAATCGATAGCTTACTCTTTGTTCTCTTTTGGCTTGATTTTTCTTTATAGTGAAAGCATGTTTCCCATTCGTGTCAACATGCTATCAGCATTTTTCTCTATTGAACTAACTTTTGCTGGGCATCTTCCTAAATCTGATCTTTTTTTTTCCCAACAAAATTAGTGACGTTAATGAATGCAGCTACTCCAAATTTGGGGATCTGACTTAGTGGTGGTGTTCTATTGACAGGACCAAGGAGTAGGAAGAAGTGTTATGTGCGTTGAGCTGGTTGCTAATCGCTTCTTGCGTAAGGTATCATAAAAGACGATATTACCGAACGTAAAATTGGTCTATTTAGATTTAGATAATCCTTTCTTCAACTGTTTAAACTCGAGAGTTAACATCTTAAACGTCAGCAAGGGAGTTTCCCCTTCGTTCGAGCTAAGTGTGTTGCAACCATTAAGGCCATATGTCCAAATGAAAAAATGACACTAATTATTGTCTTCTAGTGAATCCTTGTTTCTTTAGCAAGTTCAACCAATTATAATATCCTATAAGTTTCCTCAACACATAAATATTGTAGGGTCAAGCAGGTTACCTGTGAGATATGTCGAGGTGAGCTGATCCGGAGACTCACAGATATTAATAATAATAATGACGACAATGATGAAATCTAATAATGATCCTTGCAGATGGTACGGGTGCTTGTTGCGACAGCAATTAGAGAGGCAGCTGCTGGTGCAGGAGAGGATGCGTTACTAGAGTTGATGGATGCCACATGTCGACGTGCCACTGCACCGCCTGCACCCCCTGATGGCCTCAGTCTTGTTGATGTAGGATATGCAGAATTTGATTCACGAAATTGCTTCATTTTGGATGACTAA

mRNA sequence

ATGATACCAAATCCAAGAGCTAGACTTGTATCACCATCAGGTGCCAATTTTGGCTTCAAGATTCTGATGGAGAATCGAGCTCAGCAAAAAGACTATCTTCACTATAACCACACTGATCGCTGCAGAAATGCTAGATGGACTGCCAGGGAAAGCTACCAACTCATGTATGGAAGGCCGTGGCAAGAAGTGCTTGATTTTTACTTTCATGCTGTTAATGGAAGGTTCTCACTGACCTCGTTGTTTGGAACTGAGATAGGTCTTGATCATGATGATGCTGAGACTCCAGCGATTTACAACACAGCAGAGTTAAACAGAGCTTCATTCAAAGATAAGGCTGGGAGGTGGGCAAGGGCAACATTTAAGATTGTTCTTTCCTACCATGGAAATTCCTTTGATGGGTGGCAAAAGCAGCCAGGCTTGAATACTGTTCAGGGCTTGGTAGAAAAATCTCTAGGGAAGTTTGTAGATGAGAAGAAAGCTCAGATGCTGAAAGATAGATGCTTACCAATAGAAGGATGTGCTGTGGTTGCTGGGCGAACTGACAAAGGGGTCACAGCTCTGCGACAAGTTTGCTCATTCTATACTTGGCGCACCGATGTTAAACCTCAAGACATTGAAGATTCTATCAATAGTGCAGCTCCTGGAAAACTCAGAACATTATCTGTTTCTCAGGTGTCTCGTATCTTCCATCCAAATTTCTCTGCTAAATGGAGGCGATATCTGTATATTTTTCCTCTGAATGATGGAGAGAACATGGAGCCAGATTTTGCAATTTGGGAAGATGTAGAAAACTGTAGAGAACAGGAAAATTATGATAAAATAGAAGTCTTAAATGGTGAAGAATGCAAGAACGAGATTCATGATAATTTGGTCCTCGGTCCAAATGATGAGGAGCTTGTGTCGACTGATAAACCTAAAATGTTTAGTATAAGGAGGGTTAACCAACTACTTAGGAAACTAGAAGGGAAGTTATTGTCGTACAAGATTTTTGCACGTGACACCAAAGCATCAAGAAATGAAGGTCCACCTACGGAATGTTTTGTTTACCATGCACGAGCAGCAGAAGCTAGATTACCATGCTTGGACCAAGGAGTAGGAAGAAGTGTTATGTGCGTTGAGCTGGTTGCTAATCGCTTCTTGCGTAAGATGGTACGGGTGCTTGTTGCGACAGCAATTAGAGAGGCAGCTGCTGGTGCAGGAGAGGATGCGTTACTAGAGTTGATGGATGCCACATGTCGACGTGCCACTGCACCGCCTGCACCCCCTGATGGCCTCAGTCTTGTTGATGTAGGATATGCAGAATTTGATTCACGAAATTGCTTCATTTTGGATGACTAA

Coding sequence (CDS)

ATGATACCAAATCCAAGAGCTAGACTTGTATCACCATCAGGTGCCAATTTTGGCTTCAAGATTCTGATGGAGAATCGAGCTCAGCAAAAAGACTATCTTCACTATAACCACACTGATCGCTGCAGAAATGCTAGATGGACTGCCAGGGAAAGCTACCAACTCATGTATGGAAGGCCGTGGCAAGAAGTGCTTGATTTTTACTTTCATGCTGTTAATGGAAGGTTCTCACTGACCTCGTTGTTTGGAACTGAGATAGGTCTTGATCATGATGATGCTGAGACTCCAGCGATTTACAACACAGCAGAGTTAAACAGAGCTTCATTCAAAGATAAGGCTGGGAGGTGGGCAAGGGCAACATTTAAGATTGTTCTTTCCTACCATGGAAATTCCTTTGATGGGTGGCAAAAGCAGCCAGGCTTGAATACTGTTCAGGGCTTGGTAGAAAAATCTCTAGGGAAGTTTGTAGATGAGAAGAAAGCTCAGATGCTGAAAGATAGATGCTTACCAATAGAAGGATGTGCTGTGGTTGCTGGGCGAACTGACAAAGGGGTCACAGCTCTGCGACAAGTTTGCTCATTCTATACTTGGCGCACCGATGTTAAACCTCAAGACATTGAAGATTCTATCAATAGTGCAGCTCCTGGAAAACTCAGAACATTATCTGTTTCTCAGGTGTCTCGTATCTTCCATCCAAATTTCTCTGCTAAATGGAGGCGATATCTGTATATTTTTCCTCTGAATGATGGAGAGAACATGGAGCCAGATTTTGCAATTTGGGAAGATGTAGAAAACTGTAGAGAACAGGAAAATTATGATAAAATAGAAGTCTTAAATGGTGAAGAATGCAAGAACGAGATTCATGATAATTTGGTCCTCGGTCCAAATGATGAGGAGCTTGTGTCGACTGATAAACCTAAAATGTTTAGTATAAGGAGGGTTAACCAACTACTTAGGAAACTAGAAGGGAAGTTATTGTCGTACAAGATTTTTGCACGTGACACCAAAGCATCAAGAAATGAAGGTCCACCTACGGAATGTTTTGTTTACCATGCACGAGCAGCAGAAGCTAGATTACCATGCTTGGACCAAGGAGTAGGAAGAAGTGTTATGTGCGTTGAGCTGGTTGCTAATCGCTTCTTGCGTAAGATGGTACGGGTGCTTGTTGCGACAGCAATTAGAGAGGCAGCTGCTGGTGCAGGAGAGGATGCGTTACTAGAGTTGATGGATGCCACATGTCGACGTGCCACTGCACCGCCTGCACCCCCTGATGGCCTCAGTCTTGTTGATGTAGGATATGCAGAATTTGATTCACGAAATTGCTTCATTTTGGATGACTAA

Protein sequence

MIPNPRARLVSPSGANFGFKILMENRAQQKDYLHYNHTDRCRNARWTARESYQLMYGRPWQEVLDFYFHAVNGRFSLTSLFGTEIGLDHDDAETPAIYNTAELNRASFKDKAGRWARATFKIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQMLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRYLYIFPLNDGENMEPDFAIWEDVENCREQENYDKIEVLNGEECKNEIHDNLVLGPNDEELVSTDKPKMFSIRRVNQLLRKLEGKLLSYKIFARDTKASRNEGPPTECFVYHARAAEARLPCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPAPPDGLSLVDVGYAEFDSRNCFILDD

Homology

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BLAST of CmUC06G122420 vs. NCBI nr
Match: XP_038878348.1 (tRNA pseudouridine synthase A [Benincasa hispida])

HSP 1 Score: 867.5 bits (2240), Expect = 5.1e-248
Identity = 418/445 (93.93%), Postives = 431/445 (96.85%), Query Frame = 0


Query: 1   MIPNPRARLVSPSGANFGFKILMENRAQQKDYLHYNHTDRCRNARWTARESYQLMYGRPW 60
           MIPNPRARLVSPSGA FGFKILMENRAQQKDYLHYNHTDRCRNARWTARESYQLMYGRPW
Sbjct: 1   MIPNPRARLVSPSGAGFGFKILMENRAQQKDYLHYNHTDRCRNARWTARESYQLMYGRPW 60

Query: 61  QEVLDFYFHAVNGRFSLTSLFGTEIGLDHDDAETPAIYNTAELNRASFKDKAGRWARATF 120
           QEVLDFYFHAVNGRFSL+SLFGTEIG DHDDAE P IYNTAELNR S KDK GRWARATF
Sbjct: 61  QEVLDFYFHAVNGRFSLSSLFGTEIGHDHDDAEIPLIYNTAELNRVSVKDKTGRWARATF 120

Query: 121 KIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQMLKDRCLPIEGCAVVAGRT 180
           KIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVD+KKAQMLKD+CLPIEGCAVVAGRT
Sbjct: 121 KIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDDKKAQMLKDKCLPIEGCAVVAGRT 180

Query: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY 240
           DKGVTALRQVCSFYTWRTDV+PQDIEDSIN AAPGKLRTLSVSQVSRIFHPNFSAKWRRY
Sbjct: 181 DKGVTALRQVCSFYTWRTDVQPQDIEDSINRAAPGKLRTLSVSQVSRIFHPNFSAKWRRY 240

Query: 241 LYIFPLNDGENMEPDFAIWEDVENCREQENYDKIEVLNGEECKNEIHDNLVLGPNDEELV 300
           LYIFPLNDGENMEPD+AIWEDVE+CR++ENY KIEVLNGEECK+EIHDNLV GPNDEELV
Sbjct: 241 LYIFPLNDGENMEPDYAIWEDVEDCRKEENYGKIEVLNGEECKDEIHDNLVFGPNDEELV 300

Query: 301 STDKPKMFSIRRVNQLLRKLEGKLLSYKIFARDTKASRNEGPPTECFVYHARAAEARLPC 360
           S DKP+ FSIRRVNQLLRKLEGKLLSYK+FARDTKASRNEGPPTECFVYHARA EARLPC
Sbjct: 301 SADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAVEARLPC 360

Query: 361 LDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPA 420
           LDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPA
Sbjct: 361 LDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPA 420

Query: 421 PPDGLSLVDVGYAEFDSRNCFILDD 446
           PPDGLSLVDVGY EFDS+NCFIL+D
Sbjct: 421 PPDGLSLVDVGYTEFDSQNCFILND 445

[Close]

BLAST of CmUC06G122420 vs. NCBI nr
Match: XP_008453520.1 (PREDICTED: tRNA pseudouridine synthase A [Cucumis melo] >KAA0058161.1 tRNA pseudouridine synthase A [Cucumis melo var. makuwa])

HSP 1 Score: 818.5 bits (2113), Expect = 2.7e-233
Identity = 401/445 (90.11%), Postives = 417/445 (93.71%), Query Frame = 0


Query: 1   MIPNPRARLVSPSGANFGFKILMENRAQQKDYLHYNHTDRCRNARWTARESYQLMYGRPW 60
           MIPNPRARLVSPS A FG KILMENRAQQKDYLHYNHTDRCRNARWTARES+Q MYGRPW
Sbjct: 1   MIPNPRARLVSPSSAGFGLKILMENRAQQKDYLHYNHTDRCRNARWTARESFQFMYGRPW 60

Query: 61  QEVLDFYFHAVNGRFSLTSLFGTEIGLDHDDAETPAIYNTAELNRASFKDKAGRWARATF 120
           QEVLDFY HAVNGR SL+SL GTEI  DHDDAETP IYN+AELNRA+ KDK GRWARA F
Sbjct: 61  QEVLDFYSHAVNGRLSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARANF 120

Query: 121 KIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQMLKDRCLPIEGCAVVAGRT 180
           KIVLSYHGNSFDGWQKQPGLNTVQGLVE+SLGKFVDEKKAQMLKD+CLP+EGCAVVAGRT
Sbjct: 121 KIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAGRT 180

Query: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY 240
           DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY
Sbjct: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY 240

Query: 241 LYIFPLNDGENMEPDFAIWEDVENCREQENYDKIEVLNGEECKNEIHDNLVLGPNDEELV 300
           LYI PLNDGENMEPD AIWEDVEN RE+EN  KIE LNGE+C + IHDNLVL PND+ELV
Sbjct: 241 LYILPLNDGENMEPDSAIWEDVEN-REEENCVKIEALNGEKCVDGIHDNLVLSPNDDELV 300

Query: 301 STDKPKMFSIRRVNQLLRKLEGKLLSYKIFARDTKASRNEGPPTECFVYHARAAEARLPC 360
           S DKP+ FSIRRVNQLLRKLEGKLLSYK+FARDTKASRNEGPPTECFVYHARAAE RLPC
Sbjct: 301 SADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPC 360

Query: 361 LDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPA 420
           L+QGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELM ATCRRATAPPA
Sbjct: 361 LEQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMVATCRRATAPPA 420

Query: 421 PPDGLSLVDVGYAEFDSRNCFILDD 446
           PPDGLSLVDVGY EFDS+ CFIL+D
Sbjct: 421 PPDGLSLVDVGYTEFDSQICFILND 444

[Close]

BLAST of CmUC06G122420 vs. NCBI nr
Match: XP_004137363.1 (uncharacterized protein LOC101205562 [Cucumis sativus] >KGN63901.1 hypothetical protein Csa_013558 [Cucumis sativus])

HSP 1 Score: 808.1 bits (2086), Expect = 3.7e-230
Identity = 394/445 (88.54%), Postives = 415/445 (93.26%), Query Frame = 0


Query: 1   MIPNPRARLVSPSGANFGFKILMENRAQQKDYLHYNHTDRCRNARWTARESYQLMYGRPW 60
           MIPNPRARLVSPS A FG KILMENRAQ+KDYLHYNHTDRCR+ARWTARESYQ MYGRPW
Sbjct: 1   MIPNPRARLVSPSSAGFGLKILMENRAQRKDYLHYNHTDRCRSARWTARESYQFMYGRPW 60

Query: 61  QEVLDFYFHAVNGRFSLTSLFGTEIGLDHDDAETPAIYNTAELNRASFKDKAGRWARATF 120
           QEVLDFY HAVNGRFSL+SL GTEI  DHDDAETP IYN+AELNRA+ KDK GRWARATF
Sbjct: 61  QEVLDFYSHAVNGRFSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARATF 120

Query: 121 KIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQMLKDRCLPIEGCAVVAGRT 180
           KIVLSY GNSFDGWQKQPGLNTVQGLVE+SLGKFVDEKKAQMLKD+CLP+EGCA+VAGRT
Sbjct: 121 KIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRT 180

Query: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY 240
           DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRT SVSQVSRIFHPNFSAKWRRY
Sbjct: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRY 240

Query: 241 LYIFPLNDGENMEPDFAIWEDVENCREQENYDKIEVLNGEECKNEIHDNLVLGPNDEELV 300
           LYI PLNDGENMEPD   WE+VEN RE+EN+ KIE  NGE+C + IHDNLVL PND+ELV
Sbjct: 241 LYILPLNDGENMEPDSTTWENVEN-REEENFVKIEASNGEKCVDGIHDNLVLSPNDQELV 300

Query: 301 STDKPKMFSIRRVNQLLRKLEGKLLSYKIFARDTKASRNEGPPTECFVYHARAAEARLPC 360
           S DKP+ FSI RVNQLLRKLEGKLLSYK+FARDTKASRNEGPPTECFVYHARAAE RLPC
Sbjct: 301 SADKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPC 360

Query: 361 LDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPA 420
           L+QGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPA
Sbjct: 361 LEQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPA 420

Query: 421 PPDGLSLVDVGYAEFDSRNCFILDD 446
           PPDGLSLVDVGY +FDS+ CFIL+D
Sbjct: 421 PPDGLSLVDVGYTDFDSQICFILND 444

[Close]

BLAST of CmUC06G122420 vs. NCBI nr
Match: XP_022135239.1 (uncharacterized protein LOC111007251 isoform X1 [Momordica charantia])

HSP 1 Score: 790.4 bits (2040), Expect = 8.0e-225
Identity = 393/447 (87.92%), Postives = 411/447 (91.95%), Query Frame = 0


Query: 1   MIPNPRARLVSPSGANFGFKILMENRAQQKDYLHYNHTDRCRNARWTARESYQLMYGRPW 60
           MIPNPRARLV  S A+FG K LMENRA QKDYLHYNHTDRCRNARWTARESYQLMYGRPW
Sbjct: 1   MIPNPRARLV--SSADFGCKFLMENRAPQKDYLHYNHTDRCRNARWTARESYQLMYGRPW 60

Query: 61  QEVLDFYFHAVNGRFSLTSLFGTEIGL--DHDDAETPAIYNTAELNRASFKDKAGRWARA 120
           QEVLDFYFHAVNGRFS +SLFGTE+    DH+DAE P IYNT+ELNRAS KDK GRWARA
Sbjct: 61  QEVLDFYFHAVNGRFSPSSLFGTEVKTVHDHNDAEIPLIYNTSELNRASVKDKTGRWARA 120

Query: 121 TFKIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQMLKDRCLPIEGCAVVAG 180
           TFKIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQ+LKDRCLP+EGCAVVAG
Sbjct: 121 TFKIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQLLKDRCLPLEGCAVVAG 180

Query: 181 RTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWR 240
           RTDKGVTALRQVCSFYTWRTDVKP DIEDSINSAAP KLR LSVSQVSR FHPNFSAKWR
Sbjct: 181 RTDKGVTALRQVCSFYTWRTDVKPLDIEDSINSAAPRKLRVLSVSQVSRNFHPNFSAKWR 240

Query: 241 RYLYIFPLNDGENMEPDFAIWEDVENCREQENYDKIEVLNGEECKNEIHDNLVLGPNDEE 300
           RYLYIFPL DGENMEPDFAI ED ENCRE+ENY+KIE LNG E K+EI DNLVL  N EE
Sbjct: 241 RYLYIFPLKDGENMEPDFAIGEDAENCREEENYNKIEALNG-EFKDEILDNLVLSQN-EE 300

Query: 301 LVSTDKPKMFSIRRVNQLLRKLEGKLLSYKIFARDTKASRNEGPPTECFVYHARAAEARL 360
           L S DKP+ FS+RRVN+LLRKLEGKLLSYK+FARDTKASRNEGPPTECF+YHARA EARL
Sbjct: 301 LASDDKPQTFSVRRVNRLLRKLEGKLLSYKMFARDTKASRNEGPPTECFLYHARAVEARL 360

Query: 361 PCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAP 420
           PCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIRE AAGAGEDALL LMDATCRRATAP
Sbjct: 361 PCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREVAAGAGEDALLRLMDATCRRATAP 420

Query: 421 PAPPDGLSLVDVGYAEFDSRNCFILDD 446
           PAPPDGLSLVDVGY+EFD +NCFIL+D
Sbjct: 421 PAPPDGLSLVDVGYSEFDPQNCFILND 443

[Close]

BLAST of CmUC06G122420 vs. NCBI nr
Match: XP_022933289.1 (uncharacterized protein LOC111440432 isoform X1 [Cucurbita moschata])

HSP 1 Score: 769.2 bits (1985), Expect = 1.9e-218
Identity = 383/447 (85.68%), Postives = 404/447 (90.38%), Query Frame = 0


Query: 1   MIPNPRARLVSPSGANFGF--KILMENRAQQKDYLHYNHTDRCRNARWTARESYQLMYGR 60
           MIPNPRA L+S SGA FGF  K LMENRAQ+KDYLHYNHTDRCRNARWT+RESYQ MY R
Sbjct: 1   MIPNPRAILLSSSGAGFGFGIKCLMENRAQKKDYLHYNHTDRCRNARWTSRESYQFMYER 60

Query: 61  PWQEVLDFYFHAVNGRFSLTSLFGTEIGLDHDDAETPAIYNTAELNRASFKDKAGRWARA 120
           PWQEVLDFY HAVNGR SL+SL GTE   DHDD E   + NTAELNRA  KD  GRWARA
Sbjct: 61  PWQEVLDFYSHAVNGRLSLSSL-GTETVRDHDDTEIQPVCNTAELNRAPGKDGTGRWARA 120

Query: 121 TFKIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQMLKDRCLPIEGCAVVAG 180
           TFKIVLSYHGNSFDGWQKQP LNTVQG+VEKSLGKFVDEKKAQ LKDRCLPIEGCAVVAG
Sbjct: 121 TFKIVLSYHGNSFDGWQKQPELNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAG 180

Query: 181 RTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWR 240
           RTDKGVTALRQVCSFYTWRTDVKPQDIE SIN+AAPGKLR LSVSQVSR+FHPNFSAKWR
Sbjct: 181 RTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWR 240

Query: 241 RYLYIFPLNDGENMEPDFAIWEDVENCREQENYDKIEVLNGEECKNEIHDNLVLGPNDEE 300
           RYLYIFPL DGENMEP+FAIWEDVEN RE+E+ DKIE L+G ECK+EI +NLVL  +DEE
Sbjct: 241 RYLYIFPLKDGENMEPNFAIWEDVENIREEEHRDKIEALHG-ECKDEILNNLVLSQDDEE 300

Query: 301 LVSTDKPKMFSIRRVNQLLRKLEGKLLSYKIFARDTKASRNEGPPTECFVYHARAAEARL 360
             S +KP+ FSI RVNQLLRKLEGKLLSYK+FARDTKASRNEGPPTECFVYHARA EARL
Sbjct: 301 PASANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARL 360

Query: 361 PCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAP 420
           PCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALL+LMDATCRRATAP
Sbjct: 361 PCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAP 420

Query: 421 PAPPDGLSLVDVGYAEFDSRNCFILDD 446
           PAPPDGLSLVDVGY EFD +NCFIL+D
Sbjct: 421 PAPPDGLSLVDVGYTEFDPQNCFILND 445

[Close]

BLAST of CmUC06G122420 vs. ExPASy Swiss-Prot
Match: B5YDX5 (tRNA pseudouridine synthase A OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) OX=309799 GN=truA PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 2.0e-13
Identity = 50/134 (37.31%), Postives = 71/134 (52.99%), Query Frame = 0


Query: 120 FKIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQMLKDRCLPIEGCAVVAGR 179
           +K+ LSY G  F G+QKQPG  TVQG +EK L         ++L D  + + G    AGR
Sbjct: 4   WKVELSYIGKDFWGFQKQPGKRTVQGELEKVL---------KLLFDEDIKVIG----AGR 63

Query: 180 TDKGVTALRQVCSFYTWRT-DVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWR 239
           TD GV AL QV +F T  + +     +   +N   PG ++   V  V   FH  +SAK R
Sbjct: 64  TDAGVHALGQVVNFKTKESKNFSCDKLYKVLNKLLPGDIKIKKVEIVDDNFHARYSAKRR 123

Query: 240 RYLYIFPLNDGENM 253
            Y+Y+   N+ +N+
Sbjct: 124 WYIYVIYNNEEKNL 124

[Close]

BLAST of CmUC06G122420 vs. ExPASy Swiss-Prot
Match: C0QZT8 (tRNA pseudouridine synthase A OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) OX=565034 GN=truA PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.7e-12
Identity = 46/123 (37.40%), Postives = 61/123 (49.59%), Query Frame = 0


Query: 121 KIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQMLKDRCLPIEGCAVVAGRT 180
           KI + Y G  F GWQ QP L TVQG + K++ K   EK         + I GC    GRT
Sbjct: 5   KITIQYDGTDFYGWQIQPNLRTVQGEIYKAVQKVYGEK---------ITIYGC----GRT 64

Query: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY 240
           D GV AL QV +F   +  V    +  ++NS     LR +   ++   F+   SA +R Y
Sbjct: 65  DAGVHALGQVANFRVPKMLVPINKVHIALNSYLDRDLRIIKAEEMPDSFNARASATFREY 114

Query: 241 LYI 244
           LYI
Sbjct: 125 LYI 114

[Close]

BLAST of CmUC06G122420 vs. ExPASy Swiss-Prot
Match: B0SC03 (tRNA pseudouridine synthase A OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) OX=355278 GN=truA PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.7e-12
Identity = 43/123 (34.96%), Postives = 59/123 (47.97%), Query Frame = 0


Query: 120 FKIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQMLKDRCLPIEGCAVVAGR 179
           + +++ Y G  F+GWQKQ  L TVQ  +E +LG  +    A  L            VAGR
Sbjct: 4   YALLVEYDGTHFNGWQKQKNLPTVQSSIESALGIILRRNPASRLS-----------VAGR 63

Query: 180 TDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRR 239
           TD GV AL  VC+F T         +  S+N+  P  +   +V +V   FH  FS   R 
Sbjct: 64  TDTGVHALGMVCNFKTEHPIPNFHKLLVSLNALTPTGVSVKNVVEVPSDFHARFSCTGRE 115

Query: 240 YLY 243
           Y+Y
Sbjct: 124 YIY 115

[Close]

BLAST of CmUC06G122420 vs. ExPASy Swiss-Prot
Match: B0SJC4 (tRNA pseudouridine synthase A OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) OX=456481 GN=truA PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.7e-12
Identity = 43/123 (34.96%), Postives = 59/123 (47.97%), Query Frame = 0


Query: 120 FKIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQMLKDRCLPIEGCAVVAGR 179
           + +++ Y G  F+GWQKQ  L TVQ  +E +LG  +    A  L            VAGR
Sbjct: 4   YALLVEYDGTHFNGWQKQKNLPTVQSSIESALGIILRRNPASRLS-----------VAGR 63

Query: 180 TDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRR 239
           TD GV AL  VC+F T         +  S+N+  P  +   +V +V   FH  FS   R 
Sbjct: 64  TDTGVHALGMVCNFKTEHPIPNFHKLLVSLNALTPTGVSVKNVVEVPSDFHARFSCTGRE 115

Query: 240 YLY 243
           Y+Y
Sbjct: 124 YIY 115

[Close]

BLAST of CmUC06G122420 vs. ExPASy Swiss-Prot
Match: Q01WL4 (tRNA pseudouridine synthase A OS=Solibacter usitatus (strain Ellin6076) OX=234267 GN=truA PE=3 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 3.8e-12
Identity = 41/122 (33.61%), Postives = 65/122 (53.28%), Query Frame = 0


Query: 121 KIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQMLKDRCLPIEGCAVVAGRT 180
           +I L+Y G  F GWQ QPGL T+QG++E+ +G          ++ + + + G    +GRT
Sbjct: 5   RIYLAYDGGPFHGWQVQPGLATIQGILEEIVGG---------MEGKPVHVAG----SGRT 64

Query: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY 240
           D GV AL QV +F +    +  +++  ++N   P  +R L   +V   FHP F A  + Y
Sbjct: 65  DAGVHALAQVAAF-SIENPIPVENLRRAVNRLLPPAIRILCAEEVQADFHPRFDAVAKTY 112

Query: 241 LY 243
            Y
Sbjct: 125 EY 112

[Close]

BLAST of CmUC06G122420 vs. ExPASy TrEMBL
Match: A0A5A7UXE7 (tRNA pseudouridine synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G004790 PE=3 SV=1)

HSP 1 Score: 818.5 bits (2113), Expect = 1.3e-233
Identity = 401/445 (90.11%), Postives = 417/445 (93.71%), Query Frame = 0


Query: 1   MIPNPRARLVSPSGANFGFKILMENRAQQKDYLHYNHTDRCRNARWTARESYQLMYGRPW 60
           MIPNPRARLVSPS A FG KILMENRAQQKDYLHYNHTDRCRNARWTARES+Q MYGRPW
Sbjct: 1   MIPNPRARLVSPSSAGFGLKILMENRAQQKDYLHYNHTDRCRNARWTARESFQFMYGRPW 60

Query: 61  QEVLDFYFHAVNGRFSLTSLFGTEIGLDHDDAETPAIYNTAELNRASFKDKAGRWARATF 120
           QEVLDFY HAVNGR SL+SL GTEI  DHDDAETP IYN+AELNRA+ KDK GRWARA F
Sbjct: 61  QEVLDFYSHAVNGRLSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARANF 120

Query: 121 KIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQMLKDRCLPIEGCAVVAGRT 180
           KIVLSYHGNSFDGWQKQPGLNTVQGLVE+SLGKFVDEKKAQMLKD+CLP+EGCAVVAGRT
Sbjct: 121 KIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAGRT 180

Query: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY 240
           DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY
Sbjct: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY 240

Query: 241 LYIFPLNDGENMEPDFAIWEDVENCREQENYDKIEVLNGEECKNEIHDNLVLGPNDEELV 300
           LYI PLNDGENMEPD AIWEDVEN RE+EN  KIE LNGE+C + IHDNLVL PND+ELV
Sbjct: 241 LYILPLNDGENMEPDSAIWEDVEN-REEENCVKIEALNGEKCVDGIHDNLVLSPNDDELV 300

Query: 301 STDKPKMFSIRRVNQLLRKLEGKLLSYKIFARDTKASRNEGPPTECFVYHARAAEARLPC 360
           S DKP+ FSIRRVNQLLRKLEGKLLSYK+FARDTKASRNEGPPTECFVYHARAAE RLPC
Sbjct: 301 SADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPC 360

Query: 361 LDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPA 420
           L+QGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELM ATCRRATAPPA
Sbjct: 361 LEQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMVATCRRATAPPA 420

Query: 421 PPDGLSLVDVGYAEFDSRNCFILDD 446
           PPDGLSLVDVGY EFDS+ CFIL+D
Sbjct: 421 PPDGLSLVDVGYTEFDSQICFILND 444

[Close]

BLAST of CmUC06G122420 vs. ExPASy TrEMBL
Match: A0A1S3BWI6 (tRNA pseudouridine synthase OS=Cucumis melo OX=3656 GN=LOC103494203 PE=3 SV=1)

HSP 1 Score: 818.5 bits (2113), Expect = 1.3e-233
Identity = 401/445 (90.11%), Postives = 417/445 (93.71%), Query Frame = 0


Query: 1   MIPNPRARLVSPSGANFGFKILMENRAQQKDYLHYNHTDRCRNARWTARESYQLMYGRPW 60
           MIPNPRARLVSPS A FG KILMENRAQQKDYLHYNHTDRCRNARWTARES+Q MYGRPW
Sbjct: 1   MIPNPRARLVSPSSAGFGLKILMENRAQQKDYLHYNHTDRCRNARWTARESFQFMYGRPW 60

Query: 61  QEVLDFYFHAVNGRFSLTSLFGTEIGLDHDDAETPAIYNTAELNRASFKDKAGRWARATF 120
           QEVLDFY HAVNGR SL+SL GTEI  DHDDAETP IYN+AELNRA+ KDK GRWARA F
Sbjct: 61  QEVLDFYSHAVNGRLSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARANF 120

Query: 121 KIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQMLKDRCLPIEGCAVVAGRT 180
           KIVLSYHGNSFDGWQKQPGLNTVQGLVE+SLGKFVDEKKAQMLKD+CLP+EGCAVVAGRT
Sbjct: 121 KIVLSYHGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCAVVAGRT 180

Query: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY 240
           DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY
Sbjct: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY 240

Query: 241 LYIFPLNDGENMEPDFAIWEDVENCREQENYDKIEVLNGEECKNEIHDNLVLGPNDEELV 300
           LYI PLNDGENMEPD AIWEDVEN RE+EN  KIE LNGE+C + IHDNLVL PND+ELV
Sbjct: 241 LYILPLNDGENMEPDSAIWEDVEN-REEENCVKIEALNGEKCVDGIHDNLVLSPNDDELV 300

Query: 301 STDKPKMFSIRRVNQLLRKLEGKLLSYKIFARDTKASRNEGPPTECFVYHARAAEARLPC 360
           S DKP+ FSIRRVNQLLRKLEGKLLSYK+FARDTKASRNEGPPTECFVYHARAAE RLPC
Sbjct: 301 SADKPQTFSIRRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPC 360

Query: 361 LDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPA 420
           L+QGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELM ATCRRATAPPA
Sbjct: 361 LEQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMVATCRRATAPPA 420

Query: 421 PPDGLSLVDVGYAEFDSRNCFILDD 446
           PPDGLSLVDVGY EFDS+ CFIL+D
Sbjct: 421 PPDGLSLVDVGYTEFDSQICFILND 444

[Close]

BLAST of CmUC06G122420 vs. ExPASy TrEMBL
Match: A0A0A0LV59 (tRNA pseudouridine synthase OS=Cucumis sativus OX=3659 GN=Csa_1G025830 PE=3 SV=1)

HSP 1 Score: 808.1 bits (2086), Expect = 1.8e-230
Identity = 394/445 (88.54%), Postives = 415/445 (93.26%), Query Frame = 0


Query: 1   MIPNPRARLVSPSGANFGFKILMENRAQQKDYLHYNHTDRCRNARWTARESYQLMYGRPW 60
           MIPNPRARLVSPS A FG KILMENRAQ+KDYLHYNHTDRCR+ARWTARESYQ MYGRPW
Sbjct: 1   MIPNPRARLVSPSSAGFGLKILMENRAQRKDYLHYNHTDRCRSARWTARESYQFMYGRPW 60

Query: 61  QEVLDFYFHAVNGRFSLTSLFGTEIGLDHDDAETPAIYNTAELNRASFKDKAGRWARATF 120
           QEVLDFY HAVNGRFSL+SL GTEI  DHDDAETP IYN+AELNRA+ KDK GRWARATF
Sbjct: 61  QEVLDFYSHAVNGRFSLSSLLGTEICRDHDDAETPLIYNSAELNRAAVKDKTGRWARATF 120

Query: 121 KIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQMLKDRCLPIEGCAVVAGRT 180
           KIVLSY GNSFDGWQKQPGLNTVQGLVE+SLGKFVDEKKAQMLKD+CLP+EGCA+VAGRT
Sbjct: 121 KIVLSYDGNSFDGWQKQPGLNTVQGLVERSLGKFVDEKKAQMLKDKCLPLEGCALVAGRT 180

Query: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRY 240
           DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRT SVSQVSRIFHPNFSAKWRRY
Sbjct: 181 DKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTSSVSQVSRIFHPNFSAKWRRY 240

Query: 241 LYIFPLNDGENMEPDFAIWEDVENCREQENYDKIEVLNGEECKNEIHDNLVLGPNDEELV 300
           LYI PLNDGENMEPD   WE+VEN RE+EN+ KIE  NGE+C + IHDNLVL PND+ELV
Sbjct: 241 LYILPLNDGENMEPDSTTWENVEN-REEENFVKIEASNGEKCVDGIHDNLVLSPNDQELV 300

Query: 301 STDKPKMFSIRRVNQLLRKLEGKLLSYKIFARDTKASRNEGPPTECFVYHARAAEARLPC 360
           S DKP+ FSI RVNQLLRKLEGKLLSYK+FARDTKASRNEGPPTECFVYHARAAE RLPC
Sbjct: 301 SADKPQTFSITRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAAETRLPC 360

Query: 361 LDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPA 420
           L+QGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPA
Sbjct: 361 LEQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAPPA 420

Query: 421 PPDGLSLVDVGYAEFDSRNCFILDD 446
           PPDGLSLVDVGY +FDS+ CFIL+D
Sbjct: 421 PPDGLSLVDVGYTDFDSQICFILND 444

[Close]

BLAST of CmUC06G122420 vs. ExPASy TrEMBL
Match: A0A6J1C0W1 (tRNA pseudouridine synthase OS=Momordica charantia OX=3673 GN=LOC111007251 PE=3 SV=1)

HSP 1 Score: 790.4 bits (2040), Expect = 3.9e-225
Identity = 393/447 (87.92%), Postives = 411/447 (91.95%), Query Frame = 0


Query: 1   MIPNPRARLVSPSGANFGFKILMENRAQQKDYLHYNHTDRCRNARWTARESYQLMYGRPW 60
           MIPNPRARLV  S A+FG K LMENRA QKDYLHYNHTDRCRNARWTARESYQLMYGRPW
Sbjct: 1   MIPNPRARLV--SSADFGCKFLMENRAPQKDYLHYNHTDRCRNARWTARESYQLMYGRPW 60

Query: 61  QEVLDFYFHAVNGRFSLTSLFGTEIGL--DHDDAETPAIYNTAELNRASFKDKAGRWARA 120
           QEVLDFYFHAVNGRFS +SLFGTE+    DH+DAE P IYNT+ELNRAS KDK GRWARA
Sbjct: 61  QEVLDFYFHAVNGRFSPSSLFGTEVKTVHDHNDAEIPLIYNTSELNRASVKDKTGRWARA 120

Query: 121 TFKIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQMLKDRCLPIEGCAVVAG 180
           TFKIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQ+LKDRCLP+EGCAVVAG
Sbjct: 121 TFKIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQLLKDRCLPLEGCAVVAG 180

Query: 181 RTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWR 240
           RTDKGVTALRQVCSFYTWRTDVKP DIEDSINSAAP KLR LSVSQVSR FHPNFSAKWR
Sbjct: 181 RTDKGVTALRQVCSFYTWRTDVKPLDIEDSINSAAPRKLRVLSVSQVSRNFHPNFSAKWR 240

Query: 241 RYLYIFPLNDGENMEPDFAIWEDVENCREQENYDKIEVLNGEECKNEIHDNLVLGPNDEE 300
           RYLYIFPL DGENMEPDFAI ED ENCRE+ENY+KIE LNG E K+EI DNLVL  N EE
Sbjct: 241 RYLYIFPLKDGENMEPDFAIGEDAENCREEENYNKIEALNG-EFKDEILDNLVLSQN-EE 300

Query: 301 LVSTDKPKMFSIRRVNQLLRKLEGKLLSYKIFARDTKASRNEGPPTECFVYHARAAEARL 360
           L S DKP+ FS+RRVN+LLRKLEGKLLSYK+FARDTKASRNEGPPTECF+YHARA EARL
Sbjct: 301 LASDDKPQTFSVRRVNRLLRKLEGKLLSYKMFARDTKASRNEGPPTECFLYHARAVEARL 360

Query: 361 PCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAP 420
           PCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIRE AAGAGEDALL LMDATCRRATAP
Sbjct: 361 PCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREVAAGAGEDALLRLMDATCRRATAP 420

Query: 421 PAPPDGLSLVDVGYAEFDSRNCFILDD 446
           PAPPDGLSLVDVGY+EFD +NCFIL+D
Sbjct: 421 PAPPDGLSLVDVGYSEFDPQNCFILND 443

[Close]

BLAST of CmUC06G122420 vs. ExPASy TrEMBL
Match: A0A6J1EZC2 (tRNA pseudouridine synthase OS=Cucurbita moschata OX=3662 GN=LOC111440432 PE=3 SV=1)

HSP 1 Score: 769.2 bits (1985), Expect = 9.2e-219
Identity = 383/447 (85.68%), Postives = 404/447 (90.38%), Query Frame = 0


Query: 1   MIPNPRARLVSPSGANFGF--KILMENRAQQKDYLHYNHTDRCRNARWTARESYQLMYGR 60
           MIPNPRA L+S SGA FGF  K LMENRAQ+KDYLHYNHTDRCRNARWT+RESYQ MY R
Sbjct: 1   MIPNPRAILLSSSGAGFGFGIKCLMENRAQKKDYLHYNHTDRCRNARWTSRESYQFMYER 60

Query: 61  PWQEVLDFYFHAVNGRFSLTSLFGTEIGLDHDDAETPAIYNTAELNRASFKDKAGRWARA 120
           PWQEVLDFY HAVNGR SL+SL GTE   DHDD E   + NTAELNRA  KD  GRWARA
Sbjct: 61  PWQEVLDFYSHAVNGRLSLSSL-GTETVRDHDDTEIQPVCNTAELNRAPGKDGTGRWARA 120

Query: 121 TFKIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQMLKDRCLPIEGCAVVAG 180
           TFKIVLSYHGNSFDGWQKQP LNTVQG+VEKSLGKFVDEKKAQ LKDRCLPIEGCAVVAG
Sbjct: 121 TFKIVLSYHGNSFDGWQKQPELNTVQGVVEKSLGKFVDEKKAQQLKDRCLPIEGCAVVAG 180

Query: 181 RTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWR 240
           RTDKGVTALRQVCSFYTWRTDVKPQDIE SIN+AAPGKLR LSVSQVSR+FHPNFSAKWR
Sbjct: 181 RTDKGVTALRQVCSFYTWRTDVKPQDIEGSINNAAPGKLRVLSVSQVSRMFHPNFSAKWR 240

Query: 241 RYLYIFPLNDGENMEPDFAIWEDVENCREQENYDKIEVLNGEECKNEIHDNLVLGPNDEE 300
           RYLYIFPL DGENMEP+FAIWEDVEN RE+E+ DKIE L+G ECK+EI +NLVL  +DEE
Sbjct: 241 RYLYIFPLKDGENMEPNFAIWEDVENIREEEHRDKIEALHG-ECKDEILNNLVLSQDDEE 300

Query: 301 LVSTDKPKMFSIRRVNQLLRKLEGKLLSYKIFARDTKASRNEGPPTECFVYHARAAEARL 360
             S +KP+ FSI RVNQLLRKLEGKLLSYK+FARDTKASRNEGPPTECFVYHARA EARL
Sbjct: 301 PASANKPQTFSIMRVNQLLRKLEGKLLSYKMFARDTKASRNEGPPTECFVYHARAMEARL 360

Query: 361 PCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLELMDATCRRATAP 420
           PCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALL+LMDATCRRATAP
Sbjct: 361 PCLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAAAGAGEDALLKLMDATCRRATAP 420

Query: 421 PAPPDGLSLVDVGYAEFDSRNCFILDD 446
           PAPPDGLSLVDVGY EFD +NCFIL+D
Sbjct: 421 PAPPDGLSLVDVGYTEFDPQNCFILND 445

[Close]

BLAST of CmUC06G122420 vs. TAIR 10
Match: AT5G35400.1 (Pseudouridine synthase family protein )

HSP 1 Score: 490.0 bits (1260), Expect = 2.1e-138
Identity = 251/415 (60.48%), Postives = 307/415 (73.98%), Query Frame = 0


Query: 32  YLHYNHTDRCRNARWTARESYQLMYGRPWQEVLDFYFHAVNGRFSLTSLFGTEIGLDHDD 91
           Y+HY+H D C  ARW ARE+++ MY RPWQ VLDFY +AV G  S+ SLF  +  L HDD
Sbjct: 6   YVHYHHADACSKARWNARETFRFMYDRPWQHVLDFYSNAVEGNLSVLSLFQPKKSLVHDD 65

Query: 92  AETPAIYNTAELNRASFKD-KAGRWARATFKIVLSYHGNSFDGWQKQPGLNTVQGLVEKS 151
             T  +   +E   ++ KD ++GRW R  FKIVLSY+G SFDGWQKQP L+TVQG+VEKS
Sbjct: 66  GITEEMLLESEPETSTRKDGRSGRWERVNFKIVLSYNGASFDGWQKQPDLHTVQGVVEKS 125

Query: 152 LGKFVDEKKAQMLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSIN 211
           LG FVDE+KAQ+LK +C P+EG  +VAGRTDKGV+AL QVCSFYTWR D++P  IED+IN
Sbjct: 126 LGGFVDERKAQLLKKKCKPLEGRVLVAGRTDKGVSALNQVCSFYTWRKDIEPIAIEDAIN 185

Query: 212 SAAPGKLRTLSVSQVSRIFHPNFSAKWRRYLYIFPLNDGENMEPDFAIWEDV---ENCRE 271
             A GKLR +S+S+VSR FHPNFSAKWRRYLYIFPL+D E +       E+    EN ++
Sbjct: 186 KDASGKLRVVSISKVSRSFHPNFSAKWRRYLYIFPLDDAEPLRKSGENHENFIFDENKKK 245

Query: 272 QENYDKIEVLNGEECKNEIHDNLVLGPNDEELVSTDKPKMFSIRRVNQLLRKLEGKLLSY 331
           Q N    E +  E   +E  D L +      L   +KP  FS+ +V+QLL+ L+GK+LSY
Sbjct: 246 QRNGLLSEEIAEEVIMSE-DDELEIEETSNALEVVEKPSDFSVSKVDQLLQHLQGKVLSY 305

Query: 332 KIFARDTKASRNEGPPTECFVYHARAAEARLPCLDQGVGRSVMCVELVANRFLRKMVRVL 391
           K+FARDTKA+RNEGPPTECF+YHARAAE RL   D   GR VMCVELVANRFLRKMVRVL
Sbjct: 306 KMFARDTKAARNEGPPTECFMYHARAAEIRLSSSDCVEGRRVMCVELVANRFLRKMVRVL 365

Query: 392 VATAIREAAAGAGEDALLELMDATCRRATAPPAPPDGLSLVDVGYAEFDSRNCFI 443
           VAT+IREAAAGA +DALL+L++A+CRRATAPPAP +GL L DVGY +FD +   I
Sbjct: 366 VATSIREAAAGAEDDALLKLLEASCRRATAPPAPSEGLCLFDVGYTDFDPQTSLI 419

[Close]

BLAST of CmUC06G122420 vs. TAIR 10
Match: AT5G35400.2 (Pseudouridine synthase family protein )

HSP 1 Score: 466.5 bits (1199), Expect = 2.5e-131
Identity = 251/466 (53.86%), Postives = 307/466 (65.88%), Query Frame = 0


Query: 32  YLHYNHTDRCRNARWTARESYQLMYGRPWQEVLDFYFHAVNGRFSLTSLFGTEIGLDHDD 91
           Y+HY+H D C  ARW ARE+++ MY RPWQ VLDFY +AV G  S+ SLF  +  L HDD
Sbjct: 6   YVHYHHADACSKARWNARETFRFMYDRPWQHVLDFYSNAVEGNLSVLSLFQPKKSLVHDD 65

Query: 92  AETPAIYNTAELNRASFKD-KAGRWARATFKIVLSYHGNSFDGWQKQPGLNTVQGLVEKS 151
             T  +   +E   ++ KD ++GRW R  FKIVLSY+G SFDGWQKQP L+TVQG+VEKS
Sbjct: 66  GITEEMLLESEPETSTRKDGRSGRWERVNFKIVLSYNGASFDGWQKQPDLHTVQGVVEKS 125

Query: 152 LGKFVDEKKAQMLKDRCLPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSIN 211
           LG FVDE+KAQ+LK +C P+EG  +VAGRTDKGV+AL QVCSFYTWR D++P  IED+IN
Sbjct: 126 LGGFVDERKAQLLKKKCKPLEGRVLVAGRTDKGVSALNQVCSFYTWRKDIEPIAIEDAIN 185

Query: 212 SAAPGKLRTLSVSQVSRIFHPNFSAKWRRYLYIFPLNDGENMEPDFAIWEDV---ENCRE 271
             A GKLR +S+S+VSR FHPNFSAKWRRYLYIFPL+D E +       E+    EN ++
Sbjct: 186 KDASGKLRVVSISKVSRSFHPNFSAKWRRYLYIFPLDDAEPLRKSGENHENFIFDENKKK 245

Query: 272 QENYDKIEVLNGEECKNEIHDNLVLGPNDEELVSTDKPKMFSIRRVNQLLRKLEGKLLSY 331
           Q N    E +  E   +E  D L +      L   +KP  FS+ +V+QLL+ L+GK+LSY
Sbjct: 246 QRNGLLSEEIAEEVIMSE-DDELEIEETSNALEVVEKPSDFSVSKVDQLLQHLQGKVLSY 305

Query: 332 KIFARDTKASRNEGPPTECFVYHARAAEARLP---------------------------- 391
           K+FARDTKA+RNEGPPTECF+YHARAAE RL                             
Sbjct: 306 KMFARDTKAARNEGPPTECFMYHARAAEIRLSSSVVHFVAWVFGGSIVLVILATEGSTLD 365

Query: 392 -----------------------CLDQGVGRSVMCVELVANRFLRKMVRVLVATAIREAA 443
                                    D   GR VMCVELVANRFLRKMVRVLVAT+IREAA
Sbjct: 366 LTDTKLYIASWFLIKRSCEFLFIASDCVEGRRVMCVELVANRFLRKMVRVLVATSIREAA 425

[Close]

BLAST of CmUC06G122420 vs. TAIR 10
Match: AT1G20370.1 (Pseudouridine synthase family protein )

HSP 1 Score: 62.8 bits (151), Expect = 8.2e-10
Identity = 43/139 (30.94%), Postives = 66/139 (47.48%), Query Frame = 0


Query: 111 KAGRWARATFKIVLSYHGNSFDGWQKQPGLNTVQGLVEKSL---GKFVDEKKAQMLKDRC 170
           +A ++ R    IV ++ G  + G QK PG  T++G +E++L   G   D        DR 
Sbjct: 51  RAPKYRRRKVAIVFAFCGVGYQGMQKNPGAKTIEGELEEALFHAGAVPD-------ADRN 110

Query: 171 LPIEGCAVVAGRTDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSR 230
            P       + RTDKGV+A+ QV S    R  V P    + +NS  P ++R     +V+ 
Sbjct: 111 KPRNYEWARSARTDKGVSAVGQVVS---GRFYVDPPGFVERLNSKLPDQIRVFGYKRVAP 170

Query: 231 IFHPNFSAKWRRYLYIFPL 247
            F        RRY+Y+ P+
Sbjct: 171 SFSSKKFCDRRRYVYLIPV 179

[Close]

BLAST of CmUC06G122420 vs. TAIR 10
Match: AT3G06950.1 (Pseudouridine synthase family protein )

HSP 1 Score: 60.8 bits (146), Expect = 3.1e-09
Identity = 36/123 (29.27%), Postives = 56/123 (45.53%), Query Frame = 0


Query: 120 FKIVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQMLKDRCLPIEGCAVVAGR 179
           +++V++Y G  F GWQ Q    T+Q ++EK+L +  +  + ++            + AGR
Sbjct: 43  WRLVIAYDGTRFAGWQYQESPPTIQSMLEKALIQITELGRKELQ----------LIGAGR 102

Query: 180 TDKGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRR 239
           TD GV A  QV  F T            ++N   P  +R   +S     FH  FSA  + 
Sbjct: 103 TDAGVHAWGQVAHFVTPFNYTSLDSFHAALNGLLPKDIRVRELSAAVPEFHARFSASSKV 155

Query: 240 YLY 243
           Y Y
Sbjct: 163 YRY 155

[Close]

BLAST of CmUC06G122420 vs. TAIR 10
Match: AT1G76120.1 (Pseudouridine synthase family protein )

HSP 1 Score: 56.2 bits (134), Expect = 7.7e-08
Identity = 37/125 (29.60%), Postives = 59/125 (47.20%), Query Frame = 0


Query: 122 IVLSYHGNSFDGWQKQPGLNTVQGLVEKSLGKFVDEKKAQMLKDRCLPIEGCAVVAGRTD 181
           I+ ++ G  + G QK PG  T++G +E++L       ++   K +       A    RTD
Sbjct: 26  IIFAFCGVGYQGMQKNPGAKTIEGELEEALFHAGAVPESIRGKPKLYDFARSA----RTD 85

Query: 182 KGVTALRQVCSFYTWRTDVKPQDIEDSINSAAPGKLRTLSVSQVSRIFHPNFSAKWRRYL 241
           KGV+A+ QV S    R  V P    + +NS  P ++R      V+  F        RRY+
Sbjct: 86  KGVSAVGQVVS---GRFIVDPLGFVNRLNSNLPNQIRIFGYKHVTPSFSSKKFCDRRRYV 143

Query: 242 YIFPL 247
           Y+ P+
Sbjct: 146 YLLPV 143

The following BLAST results are available for this feature:

BLAST of CmUC06G122420 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878348.1	5.1e-248	93.93	tRNA pseudouridine synthase A [Benincasa hispida]	[more]
XP_008453520.1	2.7e-233	90.11	PREDICTED: tRNA pseudouridine synthase A [Cucumis melo] >KAA0058161.1 tRNA pseud...	[more]
XP_004137363.1	3.7e-230	88.54	uncharacterized protein LOC101205562 [Cucumis sativus] >KGN63901.1 hypothetical ...	[more]
XP_022135239.1	8.0e-225	87.92	uncharacterized protein LOC111007251 isoform X1 [Momordica charantia]	[more]
XP_022933289.1	1.9e-218	85.68	uncharacterized protein LOC111440432 isoform X1 [Cucurbita moschata]	[more]

BLAST of CmUC06G122420 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B5YDX5	2.0e-13	37.31	tRNA pseudouridine synthase A OS=Dictyoglomus thermophilum (strain ATCC 35947 / ...	[more]
C0QZT8	1.7e-12	37.40	tRNA pseudouridine synthase A OS=Brachyspira hyodysenteriae (strain ATCC 49526 /...	[more]
B0SC03	1.7e-12	34.96	tRNA pseudouridine synthase A OS=Leptospira biflexa serovar Patoc (strain Patoc ...	[more]
B0SJC4	1.7e-12	34.96	tRNA pseudouridine synthase A OS=Leptospira biflexa serovar Patoc (strain Patoc ...	[more]
Q01WL4	3.8e-12	33.61	tRNA pseudouridine synthase A OS=Solibacter usitatus (strain Ellin6076) OX=23426...	[more]

BLAST of CmUC06G122420 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UXE7	1.3e-233	90.11	tRNA pseudouridine synthase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf...	[more]
A0A1S3BWI6	1.3e-233	90.11	tRNA pseudouridine synthase OS=Cucumis melo OX=3656 GN=LOC103494203 PE=3 SV=1	[more]
A0A0A0LV59	1.8e-230	88.54	tRNA pseudouridine synthase OS=Cucumis sativus OX=3659 GN=Csa_1G025830 PE=3 SV=1	[more]
A0A6J1C0W1	3.9e-225	87.92	tRNA pseudouridine synthase OS=Momordica charantia OX=3673 GN=LOC111007251 PE=3 ...	[more]
A0A6J1EZC2	9.2e-219	85.68	tRNA pseudouridine synthase OS=Cucurbita moschata OX=3662 GN=LOC111440432 PE=3 S...	[more]

BLAST of CmUC06G122420 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G35400.1	2.1e-138	60.48	Pseudouridine synthase family protein	[more]
AT5G35400.2	2.5e-131	53.86	Pseudouridine synthase family protein	[more]
AT1G20370.1	8.2e-10	30.94	Pseudouridine synthase family protein	[more]
AT3G06950.1	3.1e-09	29.27	Pseudouridine synthase family protein	[more]
AT1G76120.1	7.7e-08	29.60	Pseudouridine synthase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020095	Pseudouridine synthase I, TruA, C-terminal	GENE3D	3.30.70.660		coord: 292..430 e-value: 2.8E-14 score: 55.1
IPR020097	Pseudouridine synthase I, TruA, alpha/beta domain	PFAM	PF01416	PseudoU_synth_1	coord: 338..432 e-value: 7.9E-7 score: 29.5
IPR020094	Pseudouridine synthase TruA/RsuA/RluB/E/F, N-terminal	GENE3D	3.30.70.580		coord: 117..235 e-value: 7.1E-24 score: 86.1
None	No IPR available	PANTHER	PTHR11142:SF10	TRNA PSEUDOURIDINE SYNTHASE	coord: 40..442
IPR001406	Pseudouridine synthase I, TruA	PANTHER	PTHR11142	PSEUDOURIDYLATE SYNTHASE	coord: 40..442
IPR020103	Pseudouridine synthase, catalytic domain superfamily	SUPERFAMILY	55120	Pseudouridine synthase	coord: 119..438

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC06G122420.1	CmUC06G122420.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031119	tRNA pseudouridine synthesis
biological_process	GO:0001522	pseudouridine synthesis
biological_process	GO:0009451	RNA modification
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0106029	tRNA pseudouridine synthase activity
molecular_function	GO:0009982	pseudouridine synthase activity