CmUC06G121740 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTACAAACACGACCATTAAACCCCTTAAATTTCCTTGTCCTTAGCACATCAAAAGATTAGATTAGATATTTTAACCTAAAGTTTATGTACAATTTAATCAACTCCCTAATCCCATATTAATCCCCCGTTTCACTCTCCTAAATCCCACTTTCAAAACTTTCCCCTATCTCTCAGCTCACACACCCTCTTCACATCACGAACCCCATATATATATATAGAGAGAGAGAGAGATTTTCATGAATTTAATTTTCAAAATTGGGAATTATGAAGGAAGAAAAAAATGGTGAATTGTTTGTTCTTCCTTTGGATAATAATTTTCCATCAAGAAATTCATCTATGAGTCGTTCCTCTCGTTTCTACTACAGAAGAACCACTGAAGGAGTTCCATTTCAGTGGGAGAAACAACCGGGGACTCCCAAGAATAATCCACCGCTCACGGAGGTCGTTCCGCCGCCGATCAGCCCTCCACCGGCCGCGCTCAGCCTTGGTTTGTCGAAGCCGGCCGTCAGAGTTGTTCAGAATAAACAACCGATTTTTTTGTTATTTGGGCCGTGGAGGAAGCAGCCCAAGCCCAAGAAGAATCCTTGTCCGTTGGATCATGATAATAGCAACGAACGTCCGAGATTTGACTCTTGTGGGTCCCACTGTGAGTTTATGGAAAAATCATCGTGCAAAGCAAAATCTCTACCGGCGACGGAATCTTCCGGTCACTTACGGGTGGGATGCGGTCCGTGGAGGATCAACCCGATTAAAATTGCAATAGGAAGGCGAGTTTAATTTCCTAATATTTTCTCCTTTGTTTGTTGGTAGGTTTTGTAAATAAATAAATTTTCTTTTATTTGTGACTATTGATAATAAGGAGCTTCTACTTATTATATTATGTTCTGAATTTTGTAGTAAATACAAATATTTCCATGTAAGCAGAAGCTCCAATTTATCAATAGGTAGGTTAGTATTATTTTATAATATCTATCTTCTTTTTATTACTAAAATAATATATTTGTGTTGTT TTACAAACACGACCATTAAACCCCTTAAATTTCCTTGTCCTTAGCACATCAAAAGATTAGATTAGATATTTTAACCTAAAGTTTATGTACAATTTAATCAACTCCCTAATCCCATATTAATCCCCCGTTTCACTCTCCTAAATCCCACTTTCAAAACTTTCCCCTATCTCTCAGCTCACACACCCTCTTCACATCACGAACCCCATATATATATATAGAGAGAGAGAGAGATTTTCATGAATTTAATTTTCAAAATTGGGAATTATGAAGGAAGAAAAAAATGGTGAATTGTTTGTTCTTCCTTTGGATAATAATTTTCCATCAAGAAATTCATCTATGAGTCGTTCCTCTCGTTTCTACTACAGAAGAACCACTGAAGGAGTTCCATTTCAGTGGGAGAAACAACCGGGGACTCCCAAGAATAATCCACCGCTCACGGAGGTCGTTCCGCCGCCGATCAGCCCTCCACCGGCCGCGCTCAGCCTTGGTTTGTCGAAGCCGGCCGTCAGAGTTGTTCAGAATAAACAACCGATTTTTTTGTTATTTGGGCCGTGGAGGAAGCAGCCCAAGCCCAAGAAGAATCCTTGTCCGTTGGATCATGATAATAGCAACGAACGTCCGAGATTTGACTCTTGTGGGTCCCACTGTGAGTTTATGGAAAAATCATCGTGCAAAGCAAAATCTCTACCGGCGACGGAATCTTCCGGTCACTTACGGGTGGGATGCGGTCCGTGGAGGATCAACCCGATTAAAATTGCAATAGGAAGGCGAGTTTAATTTCCTAATATTTTCTCCTTTGTTTGTTGGTAGGTTTTGTAAATAAATAAATTTTCTTTTATTTGTGACTATTGATAATAAGGAGCTTCTACTTATTATATTATGTTCTGAATTTTGTAGTAAATACAAATATTTCCATGTAAGCAGAAGCTCCAATTTATCAATAGGTAGGTTAGTATTATTTTATAATATCTATCTTCTTTTTATTACTAAAATAATATATTTGTGTTGTT ATGAAGGAAGAAAAAAATGGTGAATTGTTTGTTCTTCCTTTGGATAATAATTTTCCATCAAGAAATTCATCTATGAGTCGTTCCTCTCGTTTCTACTACAGAAGAACCACTGAAGGAGTTCCATTTCAGTGGGAGAAACAACCGGGGACTCCCAAGAATAATCCACCGCTCACGGAGGTCGTTCCGCCGCCGATCAGCCCTCCACCGGCCGCGCTCAGCCTTGGTTTGTCGAAGCCGGCCGTCAGAGTTGTTCAGAATAAACAACCGATTTTTTTGTTATTTGGGCCGTGGAGGAAGCAGCCCAAGCCCAAGAAGAATCCTTGTCCGTTGGATCATGATAATAGCAACGAACGTCCGAGATTTGACTCTTGTGGGTCCCACTGTGAGTTTATGGAAAAATCATCGTGCAAAGCAAAATCTCTACCGGCGACGGAATCTTCCGGTCACTTACGGGTGGGATGCGGTCCGTGGAGGATCAACCCGATTAAAATTGCAATAGGAAGGCGAGTTTAA MKEEKNGELFVLPLDNNFPSRNSSMSRSSRFYYRRTTEGVPFQWEKQPGTPKNNPPLTEVVPPPISPPPAALSLGLSKPAVRVVQNKQPIFLLFGPWRKQPKPKKNPCPLDHDNSNERPRFDSCGSHCEFMEKSSCKAKSLPATESSGHLRVGCGPWRINPIKIAIGRRV Homology
BLAST of CmUC06G121740 vs. NCBI nr
Match: XP_004146363.1 (uncharacterized protein LOC101210202 [Cucumis sativus] >KGN65458.1 hypothetical protein Csa_019691 [Cucumis sativus]) HSP 1 Score: 283.1 bits (723), Expect = 1.6e-72 Identity = 144/173 (83.24%), Postives = 151/173 (87.28%), Query Frame = 0
BLAST of CmUC06G121740 vs. NCBI nr
Match: XP_038878338.1 (uncharacterized protein LOC120070597 [Benincasa hispida]) HSP 1 Score: 258.8 bits (660), Expect = 3.2e-65 Identity = 125/146 (85.62%), Postives = 130/146 (89.04%), Query Frame = 0
BLAST of CmUC06G121740 vs. NCBI nr
Match: KAA0058273.1 (oxysterol-binding protein-related protein 4B-like [Cucumis melo var. makuwa] >TYK11825.1 oxysterol-binding protein-related protein 4B-like [Cucumis melo var. makuwa]) HSP 1 Score: 241.1 bits (614), Expect = 6.9e-60 Identity = 118/150 (78.67%), Postives = 128/150 (85.33%), Query Frame = 0
BLAST of CmUC06G121740 vs. NCBI nr
Match: XP_023530969.1 (uncharacterized protein LOC111793357 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 186.4 bits (472), Expect = 2.0e-43 Identity = 109/179 (60.89%), Postives = 124/179 (69.27%), Query Frame = 0
BLAST of CmUC06G121740 vs. NCBI nr
Match: XP_023007086.1 (uncharacterized protein LOC111499680 [Cucurbita maxima]) HSP 1 Score: 183.7 bits (465), Expect = 1.3e-42 Identity = 109/179 (60.89%), Postives = 125/179 (69.83%), Query Frame = 0
BLAST of CmUC06G121740 vs. ExPASy TrEMBL
Match: A0A0A0LUL8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G423160 PE=4 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 7.6e-73 Identity = 144/173 (83.24%), Postives = 151/173 (87.28%), Query Frame = 0
BLAST of CmUC06G121740 vs. ExPASy TrEMBL
Match: A0A5D3CJV8 (Oxysterol-binding protein-related protein 4B-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold152G00380 PE=4 SV=1) HSP 1 Score: 241.1 bits (614), Expect = 3.3e-60 Identity = 118/150 (78.67%), Postives = 128/150 (85.33%), Query Frame = 0
BLAST of CmUC06G121740 vs. ExPASy TrEMBL
Match: A0A6J1KZJ1 (uncharacterized protein LOC111499680 OS=Cucurbita maxima OX=3661 GN=LOC111499680 PE=4 SV=1) HSP 1 Score: 183.7 bits (465), Expect = 6.3e-43 Identity = 109/179 (60.89%), Postives = 125/179 (69.83%), Query Frame = 0
BLAST of CmUC06G121740 vs. ExPASy TrEMBL
Match: A0A6J1EQV3 (uncharacterized protein LOC111436686 OS=Cucurbita moschata OX=3662 GN=LOC111436686 PE=4 SV=1) HSP 1 Score: 182.2 bits (461), Expect = 1.8e-42 Identity = 107/178 (60.11%), Postives = 123/178 (69.10%), Query Frame = 0
BLAST of CmUC06G121740 vs. ExPASy TrEMBL
Match: A0A2N9IW61 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56261 PE=4 SV=1) HSP 1 Score: 106.3 bits (264), Expect = 1.3e-19 Identity = 80/189 (42.33%), Postives = 95/189 (50.26%), Query Frame = 0
BLAST of CmUC06G121740 vs. TAIR 10
Match: AT4G25845.1 (BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 4B (TAIR:AT4G25850.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 69.7 bits (169), Expect = 2.6e-12 Identity = 40/71 (56.34%), Postives = 50/71 (70.42%), Query Frame = 0
BLAST of CmUC06G121740 vs. TAIR 10
Match: AT4G25850.2 (OSBP(oxysterol binding protein)-related protein 4B ) HSP 1 Score: 69.7 bits (169), Expect = 2.6e-12 Identity = 40/71 (56.34%), Postives = 50/71 (70.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
|