CmUC06G121460 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC06G121460
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	F-box protein PP2-B10-like
Location	CmU531Chr06: 25035446 .. 25035805 (-)
RNA-Seq Expression	CmUC06G121460
Synteny	CmUC06G121460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGAAGACGGAAAGGGGAAGGCAACGGAGGGGGAAGAAATTTCTGGTTTCTCTTCGCTGCCTGAAGGAGTCGTAGCTAAAATCATGTCGCTGACCACTCCACCGGATGCCTGCCGATTGTCGGCGGTTTCTAGGACTTTCGTTGCGGCGGCGCAGTCGGATATCGTCTGGGGCAGATTCCTGCCCACCGATTGGAAGCTTTTGATTTCTCAGCGGAAATCTAGCAACCTCAATTTTGATCCAATTTCAAGTCCTAAGAAAGAGATCTTTTTCTCCCTTTGCGATGACTGCCCTTTGCTAATTGATGACGGCAATAAGGTGTGTTTTATTCCCCTAATTTCTCTAAATTCAAACTGA

mRNA sequence

ATGGAAGAAGACGGAAAGGGGAAGGCAACGGAGGGGGAAGAAATTTCTGGTTTCTCTTCGCTGCCTGAAGGAGTCGTAGCTAAAATCATGTCGCTGACCACTCCACCGGATGCCTGCCGATTGTCGGCGGTTTCTAGGACTTTCGTTGCGGCGGCGCAGTCGGATATCGTCTGGGGCAGATTCCTGCCCACCGATTGGAAGCTTTTGATTTCTCAGCGGAAATCTAGCAACCTCAATTTTGATCCAATTTCAAGTCCTAAGAAAGAGATCTTTTTCTCCCTTTGCGATGACTGCCCTTTGCTAATTGATGACGGCAATAAGGTGTGTTTTATTCCCCTAATTTCTCTAAATTCAAACTGA

Coding sequence (CDS)

ATGGAAGAAGACGGAAAGGGGAAGGCAACGGAGGGGGAAGAAATTTCTGGTTTCTCTTCGCTGCCTGAAGGAGTCGTAGCTAAAATCATGTCGCTGACCACTCCACCGGATGCCTGCCGATTGTCGGCGGTTTCTAGGACTTTCGTTGCGGCGGCGCAGTCGGATATCGTCTGGGGCAGATTCCTGCCCACCGATTGGAAGCTTTTGATTTCTCAGCGGAAATCTAGCAACCTCAATTTTGATCCAATTTCAAGTCCTAAGAAAGAGATCTTTTTCTCCCTTTGCGATGACTGCCCTTTGCTAATTGATGACGGCAATAAGGTGTGTTTTATTCCCCTAATTTCTCTAAATTCAAACTGA

Protein sequence

MEEDGKGKATEGEEISGFSSLPEGVVAKIMSLTTPPDACRLSAVSRTFVAAAQSDIVWGRFLPTDWKLLISQRKSSNLNFDPISSPKKEIFFSLCDDCPLLIDDGNKVCFIPLISLNSN

Homology

[Close]

BLAST of CmUC06G121460 vs. NCBI nr
Match: XP_038878692.1 (F-box protein PP2-B10-like [Benincasa hispida])

HSP 1 Score: 175.6 bits (444), Expect = 2.5e-40
Identity = 91/107 (85.05%), Postives = 96/107 (89.72%), Query Frame = 0


Query: 1   MEEDGKGKATEGEEISGFSSLPEGVVAKIMSLTTPPDACRLSAVSRTFVAAAQSDIVWGR 60
           MEE+ KGKATE EEIS FSSLPEGVVAKI+SLTTPPD CR SAV RTFVAA+QSDIVW R
Sbjct: 1   MEEEEKGKATE-EEISDFSSLPEGVVAKILSLTTPPDVCRSSAVCRTFVAASQSDIVWDR 60

Query: 61  FLPTDWKLLISQRKSSNLNFDPISSPKKEIFFSLCDDCPLLIDDGNK 108
           FLPTDW+LLIS+RK SNLNFDPISSPKKE FFSLCD  PLLIDDGNK
Sbjct: 61  FLPTDWELLISRRKPSNLNFDPISSPKKETFFSLCDS-PLLIDDGNK 105

[Close]

BLAST of CmUC06G121460 vs. NCBI nr
Match: XP_038878468.1 (F-box protein PP2-B10-like [Benincasa hispida])

HSP 1 Score: 172.6 bits (436), Expect = 2.1e-39
Identity = 89/107 (83.18%), Postives = 94/107 (87.85%), Query Frame = 0


Query: 1   MEEDGKGKATEGEEISGFSSLPEGVVAKIMSLTTPPDACRLSAVSRTFVAAAQSDIVWGR 60
           M E+ K K TEGEEIS FSSLPEGVVAKI+SLTTP DACR SAVSRTF AAAQSDIVW +
Sbjct: 1   MMEEEKEKGTEGEEISDFSSLPEGVVAKILSLTTPSDACRSSAVSRTFHAAAQSDIVWDK 60

Query: 61  FLPTDWKLLISQRKSSNLNFDPISSPKKEIFFSLCDDCPLLIDDGNK 108
            LPTDWKLLIS+RK SNLNFDPISSPKKEIFFSLC+  PLLIDDGNK
Sbjct: 61  LLPTDWKLLISRRKPSNLNFDPISSPKKEIFFSLCES-PLLIDDGNK 106

[Close]

BLAST of CmUC06G121460 vs. NCBI nr
Match: XP_038880064.1 (F-box protein PP2-B10-like [Benincasa hispida])

HSP 1 Score: 166.0 bits (419), Expect = 2.0e-37
Identity = 84/107 (78.50%), Postives = 92/107 (85.98%), Query Frame = 0


Query: 1   MEEDGKGKATEGEEISGFSSLPEGVVAKIMSLTTPPDACRLSAVSRTFVAAAQSDIVWGR 60
           MEE   G+A EGEEIS FSSLPEGVVAKI+SLTTPPDACR SAVSRTF AAAQSDIVW  
Sbjct: 2   MEEKENGRAMEGEEISDFSSLPEGVVAKILSLTTPPDACRSSAVSRTFHAAAQSDIVWNE 61

Query: 61  FLPTDWKLLISQRKSSNLNFDPISSPKKEIFFSLCDDCPLLIDDGNK 108
           FLPTDW+LLIS+RK   + FDPISSPKK+IFFSLC + P+LIDDGNK
Sbjct: 62  FLPTDWELLISRRKPGKIKFDPISSPKKDIFFSLCYN-PVLIDDGNK 107

[Close]

BLAST of CmUC06G121460 vs. NCBI nr
Match: XP_038879792.1 (F-box protein PP2-B10-like [Benincasa hispida])

HSP 1 Score: 165.2 bits (417), Expect = 3.4e-37
Identity = 87/106 (82.08%), Postives = 93/106 (87.74%), Query Frame = 0


Query: 2   EEDGKGKATEGEEISGFSSLPEGVVAKIMSLTTPPDACRLSAVSRTFVAAAQSDIVWGRF 61
           EE+ KGKATEGEEIS FSSLP GVVAKI SLTTP D CR SAVSR FVAAAQSD VW RF
Sbjct: 4   EEEEKGKATEGEEISDFSSLP-GVVAKIFSLTTPTDVCRSSAVSRIFVAAAQSDTVWDRF 63

Query: 62  LPTDWKLLISQRKSSNLNFDPISSPKKEIFFSLCDDCPLLIDDGNK 108
           LPTDW+LLIS+RK+SNLNFDPISS KKEIFFSLC+  P+LIDDGNK
Sbjct: 64  LPTDWELLISRRKTSNLNFDPISSSKKEIFFSLCNS-PVLIDDGNK 107

[Close]

BLAST of CmUC06G121460 vs. NCBI nr
Match: TYK09497.1 (F-box protein PP2-B10-like [Cucumis melo var. makuwa])

HSP 1 Score: 157.9 bits (398), Expect = 5.4e-35
Identity = 83/107 (77.57%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 1   MEEDGKGKATEGEEISGFSSLPEGVVAKIMSLTTPPDACRLSAVSRTFVAAAQSDIVWGR 60
           MEE+ K     GEEIS FSSLPEGVVAKI+S TTP DACR S VS TFVAAAQSDIVW  
Sbjct: 45  MEEEEK-----GEEISDFSSLPEGVVAKILSFTTPSDACRSSVVSTTFVAAAQSDIVWDS 104

Query: 61  FLPTDWKLLISQRKSSNLNFDPISSPKKEIFFSLCDDCPLLIDDGNK 108
           FLPTDW++LIS+RK SNLNFDPISS KKEIFFSLC D PL+IDDGNK
Sbjct: 105 FLPTDWEILISRRKPSNLNFDPISSSKKEIFFSLC-DTPLIIDDGNK 145

[Close]

BLAST of CmUC06G121460 vs. ExPASy Swiss-Prot
Match: Q9FV02 (F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2)

HSP 1 Score: 87.0 bits (214), Expect = 1.5e-16
Identity = 45/90 (50.00%), Postives = 63/90 (70.00%), Query Frame = 0


Query: 16  SGFSSLPEGVVAKIMSLTTPPDACRLSAVSRTFVAAAQSDIVWGRFLPTDWKLLISQRKS 75
           S   SLPEG ++ I+S T+P DAC  +AVS+ F +A +SDIVW +FLPTD++ LI+  + 
Sbjct: 22  STLDSLPEGCISNIISFTSPEDACVAAAVSKIFESAVKSDIVWEKFLPTDYESLITPSR- 81

Query: 76  SNLNFDPISSPKKEIFFSLCDDCPLLIDDG 106
                  + S KKE++FSLC+D PLLI+DG
Sbjct: 82  -------VFSSKKELYFSLCND-PLLIEDG 102

[Close]

BLAST of CmUC06G121460 vs. ExPASy Swiss-Prot
Match: Q9ZVQ8 (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 1.4e-14
Identity = 44/97 (45.36%), Postives = 67/97 (69.07%), Query Frame = 0


Query: 15  ISGFSSLPEGVVAKIMSLTTPPDACRLSAVSRTFVAAAQSDIVWGRFLPTDWKLLISQRK 74
           ++    LPE  V+ I+S T+P DAC L++VS+TF +A +SDIVW +F+P +++ LISQ +
Sbjct: 33  VAELDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSR 92

Query: 75  SSNLNFDPISSPKKEIFFSLCDDCPLLIDDGNKVCFI 112
           +    F  +S  KKE++F+LCD   +LIDDG K  +I
Sbjct: 93  A----FKFLS--KKELYFALCDK-SVLIDDGKKSLWI 122

[Close]

BLAST of CmUC06G121460 vs. ExPASy Swiss-Prot
Match: Q9ZVQ6 (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.2e-14
Identity = 41/94 (43.62%), Postives = 58/94 (61.70%), Query Frame = 0


Query: 14  EISGFSSLPEGVVAKIMSLTTPPDACRLSAVSRTFVAAAQSDIVWGRFLPTDWKLLISQR 73
           E S F S PE  ++ I+S T P DAC  + VS+TF +  +SDI+W +FLP D++ LI   
Sbjct: 10  ESSPFDSFPEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLIPPS 69

Query: 74  KSSNLNFDPISSPKKEIFFSLCDDCPLLIDDGNK 108
           +        + S KKE++FSLC+D P+L DD  K
Sbjct: 70  R--------VFSSKKELYFSLCND-PVLFDDDKK 94

[Close]

BLAST of CmUC06G121460 vs. ExPASy Swiss-Prot
Match: Q9ZVR5 (Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 4.1e-14
Identity = 42/110 (38.18%), Postives = 70/110 (63.64%), Query Frame = 0


Query: 1   MEEDGKGKATEGEEISG---FSSLPEGVVAKIMSLTTPPDACRLSAVSRTFVAAAQSDIV 60
           M +  + +++ G  ISG   F +LPE  ++ I+S T+P DAC  ++VS+TF +A  SD V
Sbjct: 27  MVQKHRVESSGGAIISGPSLFDNLPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSV 86

Query: 61  WGRFLPTDWKLLISQRKSSNLNFDPISSPKKEIFFSLCDDCPLLIDDGNK 108
           W +FLP+D+  L+   +        + S KKE++F++CD+ P+L++DG K
Sbjct: 87  WDKFLPSDYSSLVPPSR--------VFSSKKELYFAICDN-PVLVEDGGK 127

[Close]

BLAST of CmUC06G121460 vs. ExPASy Swiss-Prot
Match: Q570N1 (F-box protein PP2-B3 OS=Arabidopsis thaliana OX=3702 GN=PP2B3 PE=2 SV=2)

HSP 1 Score: 73.6 bits (179), Expect = 1.7e-12
Identity = 40/92 (43.48%), Postives = 55/92 (59.78%), Query Frame = 0


Query: 16  SGFSSLPEGVVAKIMSLTTPPDACRLSAVSRTFVAAAQSDIVWGRFLPTDWKLLISQRKS 75
           S F  LPE  ++ I+S TTP DAC  ++VS+ F +A QSD VW +FLP D+  L+ + + 
Sbjct: 11  SPFDGLPENCISNIISFTTPRDACFAASVSKAFESAVQSDSVWEKFLPLDYSSLVPESR- 70

Query: 76  SNLNFDPISSPKKEIFFSLCDDCPLLIDDGNK 108
                  +   KKE+ FSLC   PLLI+ G K
Sbjct: 71  -------VFLSKKELCFSLC-RVPLLIEGGKK 93

[Close]

BLAST of CmUC06G121460 vs. ExPASy TrEMBL
Match: A0A5A7UXV0 (F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold274G006450 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.6e-35
Identity = 83/107 (77.57%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 1   MEEDGKGKATEGEEISGFSSLPEGVVAKIMSLTTPPDACRLSAVSRTFVAAAQSDIVWGR 60
           MEE+ K     GEEIS FSSLPEGVVAKI+S TTP DACR S VS TFVAAAQSDIVW  
Sbjct: 1   MEEEEK-----GEEISDFSSLPEGVVAKILSFTTPSDACRSSVVSTTFVAAAQSDIVWDS 60

Query: 61  FLPTDWKLLISQRKSSNLNFDPISSPKKEIFFSLCDDCPLLIDDGNK 108
           FLPTDW++LIS+RK SNLNFDPISS KKEIFFSLC D PL+IDDGNK
Sbjct: 61  FLPTDWEILISRRKPSNLNFDPISSSKKEIFFSLC-DTPLIIDDGNK 101

[Close]

BLAST of CmUC06G121460 vs. ExPASy TrEMBL
Match: A0A5D3CBY5 (F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold499G00980 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.6e-35
Identity = 83/107 (77.57%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 1   MEEDGKGKATEGEEISGFSSLPEGVVAKIMSLTTPPDACRLSAVSRTFVAAAQSDIVWGR 60
           MEE+ K     GEEIS FSSLPEGVVAKI+S TTP DACR S VS TFVAAAQSDIVW  
Sbjct: 45  MEEEEK-----GEEISDFSSLPEGVVAKILSFTTPSDACRSSVVSTTFVAAAQSDIVWDS 104

Query: 61  FLPTDWKLLISQRKSSNLNFDPISSPKKEIFFSLCDDCPLLIDDGNK 108
           FLPTDW++LIS+RK SNLNFDPISS KKEIFFSLC D PL+IDDGNK
Sbjct: 105 FLPTDWEILISRRKPSNLNFDPISSSKKEIFFSLC-DTPLIIDDGNK 145

[Close]

BLAST of CmUC06G121460 vs. ExPASy TrEMBL
Match: A0A1S3BWT7 (F-box protein PP2-B10-like OS=Cucumis melo OX=3656 GN=LOC103494288 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 2.6e-35
Identity = 83/107 (77.57%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 1   MEEDGKGKATEGEEISGFSSLPEGVVAKIMSLTTPPDACRLSAVSRTFVAAAQSDIVWGR 60
           MEE+ K     GEEIS FSSLPEGVVAKI+S TTP DACR S VS TFVAAAQSDIVW  
Sbjct: 1   MEEEEK-----GEEISDFSSLPEGVVAKILSFTTPSDACRSSVVSTTFVAAAQSDIVWDS 60

Query: 61  FLPTDWKLLISQRKSSNLNFDPISSPKKEIFFSLCDDCPLLIDDGNK 108
           FLPTDW++LIS+RK SNLNFDPISS KKEIFFSLC D PL+IDDGNK
Sbjct: 61  FLPTDWEILISRRKPSNLNFDPISSSKKEIFFSLC-DTPLIIDDGNK 101

[Close]

BLAST of CmUC06G121460 vs. ExPASy TrEMBL
Match: A0A0A0LWS1 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G421890 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.1e-33
Identity = 81/107 (75.70%), Postives = 87/107 (81.31%), Query Frame = 0


Query: 1   MEEDGKGKATEGEEISGFSSLPEGVVAKIMSLTTPPDACRLSAVSRTFVAAAQSDIVWGR 60
           MEE+ K     GE IS FSSLPEGVVAKI+S TTP DACR S VS TFVAAAQSDIVW  
Sbjct: 1   MEEEEK-----GEGISDFSSLPEGVVAKILSFTTPSDACRSSVVSTTFVAAAQSDIVWDS 60

Query: 61  FLPTDWKLLISQRKSSNLNFDPISSPKKEIFFSLCDDCPLLIDDGNK 108
           FLPTDW++LIS+RK SNLNFDPISS KK IFFSLC D PL+IDDGNK
Sbjct: 61  FLPTDWEILISRRKPSNLNFDPISSSKKGIFFSLC-DTPLIIDDGNK 101

[Close]

BLAST of CmUC06G121460 vs. ExPASy TrEMBL
Match: A0A0A0LX65 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G421920 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 5.4e-33
Identity = 77/107 (71.96%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 1   MEEDGKGKATEGEEISGFSSLPEGVVAKIMSLTTPPDACRLSAVSRTFVAAAQSDIVWGR 60
           ME + KGKA EGE++S FSSLPEGVVAKI+SLTTPPDAC  SAVS+ F AAAQSDIVW +
Sbjct: 1   MEGEIKGKAMEGEQLSDFSSLPEGVVAKILSLTTPPDACVSSAVSKIFHAAAQSDIVWNQ 60

Query: 61  FLPTDWKLLISQRKSSNLNFDPISSPKKEIFFSLCDDCPLLIDDGNK 108
           FLPTDW+L IS+   + L FDPI SPKK+IFFSLC   P+LIDDGNK
Sbjct: 61  FLPTDWELFISRSNPNKLKFDPIFSPKKDIFFSLC-YFPVLIDDGNK 106

[Close]

BLAST of CmUC06G121460 vs. TAIR 10
Match: AT2G02340.1 (phloem protein 2-B8 )

HSP 1 Score: 80.5 bits (197), Expect = 1.0e-15
Identity = 44/97 (45.36%), Postives = 67/97 (69.07%), Query Frame = 0


Query: 15  ISGFSSLPEGVVAKIMSLTTPPDACRLSAVSRTFVAAAQSDIVWGRFLPTDWKLLISQRK 74
           ++    LPE  V+ I+S T+P DAC L++VS+TF +A +SDIVW +F+P +++ LISQ +
Sbjct: 33  VAELDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSR 92

Query: 75  SSNLNFDPISSPKKEIFFSLCDDCPLLIDDGNKVCFI 112
           +    F  +S  KKE++F+LCD   +LIDDG K  +I
Sbjct: 93  A----FKFLS--KKELYFALCDK-SVLIDDGKKSLWI 122

[Close]

BLAST of CmUC06G121460 vs. TAIR 10
Match: AT2G02360.1 (phloem protein 2-B10 )

HSP 1 Score: 79.3 bits (194), Expect = 2.3e-15
Identity = 41/94 (43.62%), Postives = 58/94 (61.70%), Query Frame = 0


Query: 14  EISGFSSLPEGVVAKIMSLTTPPDACRLSAVSRTFVAAAQSDIVWGRFLPTDWKLLISQR 73
           E S F S PE  ++ I+S T P DAC  + VS+TF +  +SDI+W +FLP D++ LI   
Sbjct: 10  ESSPFDSFPEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESLIPPS 69

Query: 74  KSSNLNFDPISSPKKEIFFSLCDDCPLLIDDGNK 108
           +        + S KKE++FSLC+D P+L DD  K
Sbjct: 70  R--------VFSSKKELYFSLCND-PVLFDDDKK 94

[Close]

BLAST of CmUC06G121460 vs. TAIR 10
Match: AT2G02250.1 (phloem protein 2-B2 )

HSP 1 Score: 79.0 bits (193), Expect = 2.9e-15
Identity = 42/110 (38.18%), Postives = 70/110 (63.64%), Query Frame = 0


Query: 1   MEEDGKGKATEGEEISG---FSSLPEGVVAKIMSLTTPPDACRLSAVSRTFVAAAQSDIV 60
           M +  + +++ G  ISG   F +LPE  ++ I+S T+P DAC  ++VS+TF +A  SD V
Sbjct: 27  MVQKHRVESSGGAIISGPSLFDNLPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSV 86

Query: 61  WGRFLPTDWKLLISQRKSSNLNFDPISSPKKEIFFSLCDDCPLLIDDGNK 108
           W +FLP+D+  L+   +        + S KKE++F++CD+ P+L++DG K
Sbjct: 87  WDKFLPSDYSSLVPPSR--------VFSSKKELYFAICDN-PVLVEDGGK 127

[Close]

BLAST of CmUC06G121460 vs. TAIR 10
Match: AT1G56250.1 (phloem protein 2-B14 )

HSP 1 Score: 71.6 bits (174), Expect = 4.7e-13
Identity = 41/88 (46.59%), Postives = 52/88 (59.09%), Query Frame = 0


Query: 21  LPEGVVAKIMSLTTPPDACRLSAVSRTFVAAAQSDIVWGRFLPTDWKLLISQRKSSNLNF 80
           LPE  +A I++ T+P DA   S VS  F  A  SD VW +FLP+D+K LISQ    + N 
Sbjct: 4   LPEACIANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSDYKSLISQSTDHHWNI 63

Query: 81  DPISSPKKEIFFSLCDDCPLLIDDGNKV 109
               S KKEI+  LCD   LLID+  K+
Sbjct: 64  ----SSKKEIYRCLCDS--LLIDNARKL 85

[Close]

BLAST of CmUC06G121460 vs. TAIR 10
Match: AT2G02230.1 (phloem protein 2-B1 )

HSP 1 Score: 71.6 bits (174), Expect = 4.7e-13
Identity = 42/108 (38.89%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 5   GKGKATEGEEI-----SGFSSLPEGVVAKIMSLTTPPDACRLSAVSRTFVAAAQSDIVWG 64
           G G ++  +EI     S F +LPE  ++K++S T+P DAC +++VS++  +AAQSD+VW 
Sbjct: 14  GGGGSSRNDEISVTRASRFDALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWE 73

Query: 65  RFLPTDWKLLISQRKSSNLNFDPISSPKKEIFFSLCDDCPLLIDDGNK 108
            FLP+++  L+ Q  +++L+       KKEIF SL D+  +L+++G K
Sbjct: 74  MFLPSEYSSLVLQ-SANHLS-------KKEIFLSLADN-SVLVENGKK 112

The following BLAST results are available for this feature:

BLAST of CmUC06G121460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878692.1	2.5e-40	85.05	F-box protein PP2-B10-like [Benincasa hispida]	[more]
XP_038878468.1	2.1e-39	83.18	F-box protein PP2-B10-like [Benincasa hispida]	[more]
XP_038880064.1	2.0e-37	78.50	F-box protein PP2-B10-like [Benincasa hispida]	[more]
XP_038879792.1	3.4e-37	82.08	F-box protein PP2-B10-like [Benincasa hispida]	[more]
TYK09497.1	5.4e-35	77.57	F-box protein PP2-B10-like [Cucumis melo var. makuwa]	[more]

BLAST of CmUC06G121460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FV02	1.5e-16	50.00	F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2	[more]
Q9ZVQ8	1.4e-14	45.36	Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1	[more]
Q9ZVQ6	3.2e-14	43.62	F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1	[more]
Q9ZVR5	4.1e-14	38.18	Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2	[more]
Q570N1	1.7e-12	43.48	F-box protein PP2-B3 OS=Arabidopsis thaliana OX=3702 GN=PP2B3 PE=2 SV=2	[more]

BLAST of CmUC06G121460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UXV0	2.6e-35	77.57	F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A5D3CBY5	2.6e-35	77.57	F-box protein PP2-B10-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S3BWT7	2.6e-35	77.57	F-box protein PP2-B10-like OS=Cucumis melo OX=3656 GN=LOC103494288 PE=4 SV=1	[more]
A0A0A0LWS1	1.1e-33	75.70	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G421890 PE=4 ...	[more]
A0A0A0LX65	5.4e-33	71.96	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G421920 PE=4 ...	[more]

BLAST of CmUC06G121460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02340.1	1.0e-15	45.36	phloem protein 2-B8	[more]
AT2G02360.1	2.3e-15	43.62	phloem protein 2-B10	[more]
AT2G02250.1	2.9e-15	38.18	phloem protein 2-B2	[more]
AT1G56250.1	4.7e-13	46.59	phloem protein 2-B14	[more]
AT2G02230.1	4.7e-13	38.89	phloem protein 2-B1	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.1280.50		coord: 7..91 e-value: 5.4E-7 score: 31.4
None	No IPR available	PANTHER	PTHR32278:SF71	SUBFAMILY NOT NAMED	coord: 10..108
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 10..108
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 15..61 score: 9.523964
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 6..91

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC06G121460.1	CmUC06G121460.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding