Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACTTCATTTCCATCTGGGATAGTGATTCTCCTCCTTACTGTTCCTGAAAGCGCAGCATCCAATGGAGTAAACAATGATGAGAAACACGAGTACAACAATATTAATAATCGCCACTTTCTTCCAGTTCCTCTTCAAATTATCCAACACTCCACCCTTGCAGGATTGGCAATTGAAGCACAGAGTTTCAGGATTGTTATTCCACAAACCACAATCCGGATTAGAAAAACTTGAAGAATTCGTTGGATTCGTCCACTGAGTTGGCGTCATGTAGTTGAAATTGCATTCATCTGGCGGCTTGCAGCACCCAGACTACAGAGAATTCACAAAAACATCTTGTTAGTTATGAAATTATTAGAGGGGTTTTGTTAAATTCCCCTTTTAATTAAAACCGAAAGCGAAATCGTACCTGAATTGAAGATAAGTGTTCTTGGTAGAATTGCTCAACGGAATCACGGGCGAATTTATCGTTGAATTCATTACAGACCTTGCCGTCGACCAAACAGCTTCTGATTCTGTTCCAGTCTTTGTTGTTGCTAACGCGATTCTGGAGCCAGTTGGAGTAATCGCCGAGTCTGTATTCCTTGTAGCCTCTGTTGGAGAGAACTTTTCCGGCGCCTTTGTTGGTGACGGCGAAGGCGAAGATGGTGAAGACGAAGAGGAGGACGATGAGAAGGAACATGACGAAAAGGTAAATCCAGAGAAGCCATCTCACGCGACAGCACGCGCCGATGAAACCCGCGAGTGA
mRNA sequence
ATGACTTCATTTCCATCTGGGATAGTGATTCTCCTCCTTACTGTTCCTGAAAGCGCAGCATCCAATGGAGTAAACAATGATGAGAAACACGAGTACAACAATATTAATAATCGCCACTTTCTTCCAGTTCCTCTTCAAATTATCCAACACTCCACCCTTGCAGGATTGGCAATTGAAGCACAGAGTTTCAGGATTTTGAAATTGCATTCATCTGGCGGCTTGCAGCACCCAGACTACAGAGAATTCACAAAAACATCTTACCTTGCCGTCGACCAAACAGCTTCTGATTCTGTTCCAGTCTTTGTTGTTGCTAACGCGATTCTGGAGCCAGTTGGAGTAATCGCCGAGTCTGTATTCCTTGTAGCCTCTGTTGGAGAGAACTTTTCCGGCGCCTTTGTTGGTGACGGCGAAGGCGAAGATGGTGAAGACGAAGAGGAGGACGATGAGAAGGAACATGACGAAAAGGTAAATCCAGAGAAGCCATCTCACGCGACAGCACGCGCCGATGAAACCCGCGAGTGA
Coding sequence (CDS)
ATGACTTCATTTCCATCTGGGATAGTGATTCTCCTCCTTACTGTTCCTGAAAGCGCAGCATCCAATGGAGTAAACAATGATGAGAAACACGAGTACAACAATATTAATAATCGCCACTTTCTTCCAGTTCCTCTTCAAATTATCCAACACTCCACCCTTGCAGGATTGGCAATTGAAGCACAGAGTTTCAGGATTTTGAAATTGCATTCATCTGGCGGCTTGCAGCACCCAGACTACAGAGAATTCACAAAAACATCTTACCTTGCCGTCGACCAAACAGCTTCTGATTCTGTTCCAGTCTTTGTTGTTGCTAACGCGATTCTGGAGCCAGTTGGAGTAATCGCCGAGTCTGTATTCCTTGTAGCCTCTGTTGGAGAGAACTTTTCCGGCGCCTTTGTTGGTGACGGCGAAGGCGAAGATGGTGAAGACGAAGAGGAGGACGATGAGAAGGAACATGACGAAAAGGTAAATCCAGAGAAGCCATCTCACGCGACAGCACGCGCCGATGAAACCCGCGAGTGA
Protein sequence
MTSFPSGIVILLLTVPESAASNGVNNDEKHEYNNINNRHFLPVPLQIIQHSTLAGLAIEAQSFRILKLHSSGGLQHPDYREFTKTSYLAVDQTASDSVPVFVVANAILEPVGVIAESVFLVASVGENFSGAFVGDGEGEDGEDEEEDDEKEHDEKVNPEKPSHATARADETRE
Homology
BLAST of CmUC06G121120 vs. NCBI nr
Match:
ONK69678.1 (uncharacterized protein A4U43_C05F25580 [Asparagus officinalis])
HSP 1 Score: 119.4 bits (298), Expect = 3.1e-23
Identity = 79/186 (42.47%), Postives = 112/186 (60.22%), Query Frame = 0
Query: 3 SFPSGIVILLLTVPESAASNGVNNDEKHEYNNINNRHFLPVPLQIIQHSTLA-------- 62
SFPSGI I+L VP+ ASN V+NDEKH+ +++ +R LP+ L + + ++LA
Sbjct: 2 SFPSGISIVLPVVPKGTASNRVDNDEKHKEDDVQDRDLLPIILDVGEDTSLARFTIVTEG 61
Query: 63 -GLAIEAQSFRILKLHSSGGL------QHPDYREFTKTSYLAVDQTASDSVPVFVVANAI 122
G+ + + ++ S GL P + LA++QTA D P+ + +
Sbjct: 62 VGIVVPDWAVGVVGGESICGLVPYSCALSPVAIPLKPLANLAINQTAPDLPPILGALDPL 121
Query: 123 LEPVGVIAESVFLVASVGENFSGAFVGDGEGEDGEDEEEDDEKEHDEKVNPEKPSHATAR 174
L+PVGV+ E V LVAS G+N +G+ VGD EGEDGE EEEDDE+EHDE+V+PE+ A A
Sbjct: 122 LQPVGVVPEPVLLVASPGDNLAGSLVGDDEGEDGEAEEEDDEEEHDEEVDPEEEGVAAAG 181
BLAST of CmUC06G121120 vs. NCBI nr
Match:
OAY76094.1 (WAT1-related protein [Ananas comosus])
HSP 1 Score: 96.7 bits (239), Expect = 2.1e-16
Identity = 78/212 (36.79%), Postives = 111/212 (52.36%), Query Frame = 0
Query: 1 MTSFPSGIVILLL--TVPESAASNGVNNDEKHEYNNINNRHFLPVPLQIIQHSTLAGLAI 60
++SFPS + + ++ VPE AAS+ V++DE+ E ++I + LPV L + +H+ LAGLA
Sbjct: 356 ISSFPSAVAVRIVAPNVPECAASDRVDDDEEDEDDDIYDGDLLPVLLDVGEHAGLAGLAA 415
Query: 61 EAQSFRIL---------------KLHSSGGLQH-------------------PD------ 120
A+ R++ +HS H PD
Sbjct: 416 IAEGRRVVVPRRAVGVVGRAQCRGVHSPHSWTHIVEVAFGGRQLYLNRGEIVPDELIEGL 475
Query: 121 YREFTKTSYLAVDQTASDSVPVFVVANAILEPVGVIAESVFLVASVGENFSGAFVGDGEG 171
+ L V Q A D PV V +A+LEPVGV+AE+V L +VG+ +GA VGD EG
Sbjct: 476 VALLEPLANLRVLQAAPDLGPVLGVVDALLEPVGVVAEAVLLEPAVGDGLAGALVGDEEG 535
BLAST of CmUC06G121120 vs. NCBI nr
Match:
CAA2615004.1 (unnamed protein product [Spirodela intermedia])
HSP 1 Score: 68.9 bits (167), Expect = 4.8e-08
Identity = 55/170 (32.35%), Postives = 87/170 (51.18%), Query Frame = 0
Query: 15 VPESAASNGVNNDEKHEYNNINNRHFLPVPLQIIQHSTLAGLAIEAQSFRIL------KL 74
V E AA++GV+ ++ +++++ +R+ +PVP ++QH+ AG+A+ AQ R++ +
Sbjct: 31 VAEGAAADGVDAHQEGQHHHVQHRYLVPVPPHLLQHAGSAGIALVAQHRRLVAPPTRRRR 90
Query: 75 HSSGGLQHPDYREFT--------KTSYLAVDQTASDSVPVFVVANAILEPVGVIAESVFL 134
L + + L D A++ P V NA EP V+ E V
Sbjct: 91 REMADLDGGEIALHVVERGPGGDHGAGLGGDDAATEGEPAAGVGNAGTEPWVVVLEVVLA 150
Query: 135 VASVGENFSGAFVGDGEGEDGEDEEEDDEKEHDEKVNPEKPSHATARADE 171
V G+ + A G GE ED E EE+ DE+EHD +V PE+P A ADE
Sbjct: 151 VDPAGDLGAAAAAGHGEPEDSEAEEDADEEEHDAEVEPERPRDVEAGADE 200
BLAST of CmUC06G121120 vs. NCBI nr
Match:
CAA7389445.1 (unnamed protein product [Spirodela intermedia])
HSP 1 Score: 68.2 bits (165), Expect = 8.1e-08
Identity = 55/170 (32.35%), Postives = 87/170 (51.18%), Query Frame = 0
Query: 15 VPESAASNGVNNDEKHEYNNINNRHFLPVPLQIIQHSTLAGLAIEAQSFRIL------KL 74
V E AA++GV+ ++ +++++ +R+ +PVP ++QH+ AG+A+ AQ R++ +
Sbjct: 31 VAEGAAADGVDAHQEGQHHHVQHRYLVPVPPHLLQHAGSAGIALVAQHRRLVAPPTRRRR 90
Query: 75 HSSGGLQHPDYREFT--------KTSYLAVDQTASDSVPVFVVANAILEPVGVIAESVFL 134
L + + L D A++ P V NA EP V+ E V
Sbjct: 91 REMADLDGGEIALHVVERGPGGDHGAGLGGDDAATEGEPAPGVGNAGTEPWVVVLEVVLA 150
Query: 135 VASVGENFSGAFVGDGEGEDGEDEEEDDEKEHDEKVNPEKPSHATARADE 171
V G+ + A G GE ED E EE+ DE+EHD +V PE+P A ADE
Sbjct: 151 VDPAGDLGAAAAAGHGEPEDSEAEEDADEEEHDAEVEPERPRDVEAGADE 200
BLAST of CmUC06G121120 vs. NCBI nr
Match:
EYU39587.1 (hypothetical protein MIMGU_mgv1a013325mg [Erythranthe guttata])
HSP 1 Score: 55.1 bits (131), Expect = 7.1e-04
Identity = 56/184 (30.43%), Postives = 86/184 (46.74%), Query Frame = 0
Query: 20 ASNGVNNDEKHEYNNINNRHFLPVPLQIIQHSTLAGLAIEAQ---------SFRIL---- 79
AS+GV +DE H ++ I +R +PVP ++QH A LA+ AQ + R+L
Sbjct: 40 ASDGVYSDEHHHHHYIQHRQLVPVPPHVLQHPRPARLALVAQHPRRVAPPVAVRLLRRRL 99
Query: 80 ---------------KLHSSGGLQHPDYR--EFTKTSYLAVDQTASDSVPVFVVANAILE 139
+LH + R + + L A D PV V + + +
Sbjct: 100 RRRRIVAGRRRLAAPRLHRRHLRRQVIERRPQNNLRASLRPQYAALDIHPVPRVLDPLPQ 159
Query: 140 PVGVIAESVFLVASVGENFSGAFVGDGEGEDGEDEEEDDEKEHDEKVNPEKPSHATARAD 174
P V+ + + V + + A GD E E+G+ + DE+EHD+KV+P+ P H ARAD
Sbjct: 160 PRRVVFQVILPVRAARHGGAAAGAGDDEPENGKAHQCSDEEEHDDKVHPQCPRHVEARAD 219
BLAST of CmUC06G121120 vs. ExPASy TrEMBL
Match:
A0A5P1EUF8 (Uncharacterized protein OS=Asparagus officinalis OX=4686 GN=A4U43_C05F25580 PE=4 SV=1)
HSP 1 Score: 119.4 bits (298), Expect = 1.5e-23
Identity = 79/186 (42.47%), Postives = 112/186 (60.22%), Query Frame = 0
Query: 3 SFPSGIVILLLTVPESAASNGVNNDEKHEYNNINNRHFLPVPLQIIQHSTLA-------- 62
SFPSGI I+L VP+ ASN V+NDEKH+ +++ +R LP+ L + + ++LA
Sbjct: 2 SFPSGISIVLPVVPKGTASNRVDNDEKHKEDDVQDRDLLPIILDVGEDTSLARFTIVTEG 61
Query: 63 -GLAIEAQSFRILKLHSSGGL------QHPDYREFTKTSYLAVDQTASDSVPVFVVANAI 122
G+ + + ++ S GL P + LA++QTA D P+ + +
Sbjct: 62 VGIVVPDWAVGVVGGESICGLVPYSCALSPVAIPLKPLANLAINQTAPDLPPILGALDPL 121
Query: 123 LEPVGVIAESVFLVASVGENFSGAFVGDGEGEDGEDEEEDDEKEHDEKVNPEKPSHATAR 174
L+PVGV+ E V LVAS G+N +G+ VGD EGEDGE EEEDDE+EHDE+V+PE+ A A
Sbjct: 122 LQPVGVVPEPVLLVASPGDNLAGSLVGDDEGEDGEAEEEDDEEEHDEEVDPEEEGVAAAG 181
BLAST of CmUC06G121120 vs. ExPASy TrEMBL
Match:
A0A199VG59 (WAT1-related protein OS=Ananas comosus OX=4615 GN=ACMD2_24744 PE=4 SV=1)
HSP 1 Score: 96.7 bits (239), Expect = 1.0e-16
Identity = 78/212 (36.79%), Postives = 111/212 (52.36%), Query Frame = 0
Query: 1 MTSFPSGIVILLL--TVPESAASNGVNNDEKHEYNNINNRHFLPVPLQIIQHSTLAGLAI 60
++SFPS + + ++ VPE AAS+ V++DE+ E ++I + LPV L + +H+ LAGLA
Sbjct: 356 ISSFPSAVAVRIVAPNVPECAASDRVDDDEEDEDDDIYDGDLLPVLLDVGEHAGLAGLAA 415
Query: 61 EAQSFRIL---------------KLHSSGGLQH-------------------PD------ 120
A+ R++ +HS H PD
Sbjct: 416 IAEGRRVVVPRRAVGVVGRAQCRGVHSPHSWTHIVEVAFGGRQLYLNRGEIVPDELIEGL 475
Query: 121 YREFTKTSYLAVDQTASDSVPVFVVANAILEPVGVIAESVFLVASVGENFSGAFVGDGEG 171
+ L V Q A D PV V +A+LEPVGV+AE+V L +VG+ +GA VGD EG
Sbjct: 476 VALLEPLANLRVLQAAPDLGPVLGVVDALLEPVGVVAEAVLLEPAVGDGLAGALVGDEEG 535
BLAST of CmUC06G121120 vs. ExPASy TrEMBL
Match:
A0A7C9ERC8 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)
HSP 1 Score: 87.0 bits (214), Expect = 8.2e-14
Identity = 62/186 (33.33%), Postives = 94/186 (50.54%), Query Frame = 0
Query: 15 VPESAASNGVNNDEKHEYNNINNRHFLPVPLQIIQHSTLAGLAIEAQSFRIL-------- 74
V ES A++GV+NDE+ + +++++ H PV L+++QH LA EA+ ++
Sbjct: 22 VTESTAADGVDNDEEDKEDDVDHSHPFPVGLEVLQHPGLARFTAEAEGIGVIAPFIAVWI 81
Query: 75 -KLHSSGGLQHPDYREFTKTSYL---------------------------------AVDQ 134
+ GGL + K + L V Q
Sbjct: 82 RAICCWGGLDPHGWALVGKVATLWWFAATRLNRIQILGEELLGGNFVILNEILAEFTVHQ 141
Query: 135 TASDSVPVFVVANAILEPVGVIAESVFLVASVGENFSGAFVGDGEGEDGEDEEEDDEKEH 159
TA + +P+ V + L+PVGV+ E V LV+S+ + F+G+FVGD EGEDGE EE DDE EH
Sbjct: 142 TAVNPIPIPTVGDTFLKPVGVVPELVLLVSSITQGFAGSFVGDDEGEDGEAEEYDDEYEH 201
BLAST of CmUC06G121120 vs. ExPASy TrEMBL
Match:
A0A3N6S050 (Uncharacterized protein (Fragment) OS=Brassica cretica OX=69181 GN=DY000_00002759 PE=4 SV=1)
HSP 1 Score: 80.1 bits (196), Expect = 1.0e-11
Identity = 45/86 (52.33%), Postives = 62/86 (72.09%), Query Frame = 0
Query: 86 SYLAVDQTASDSVPVFVVANAILEPVGVIAESVFLVASVGENFSGAFVGDGEGEDGEDEE 145
+++ VDQ A D +P+ +A++ L+PV VI ++V L+ S+G+N SGA VGDGEGEDGE E
Sbjct: 45 AHVGVDQAALDPIPILSIAHSFLQPVRVITDAVLLIPSIGQNLSGAAVGDGEGEDGEAEP 104
Query: 146 EDDEKEHDEKVNPEKPSHATARADET 172
E+ E+EH KV PE+ A A ADET
Sbjct: 105 EEYEEEHGAKVEPEEARDAAASADET 130
BLAST of CmUC06G121120 vs. ExPASy TrEMBL
Match:
A0A7I8IAL1 (Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_01001367 PE=4 SV=1)
HSP 1 Score: 68.9 bits (167), Expect = 2.3e-08
Identity = 55/170 (32.35%), Postives = 87/170 (51.18%), Query Frame = 0
Query: 15 VPESAASNGVNNDEKHEYNNINNRHFLPVPLQIIQHSTLAGLAIEAQSFRIL------KL 74
V E AA++GV+ ++ +++++ +R+ +PVP ++QH+ AG+A+ AQ R++ +
Sbjct: 31 VAEGAAADGVDAHQEGQHHHVQHRYLVPVPPHLLQHAGSAGIALVAQHRRLVAPPTRRRR 90
Query: 75 HSSGGLQHPDYREFT--------KTSYLAVDQTASDSVPVFVVANAILEPVGVIAESVFL 134
L + + L D A++ P V NA EP V+ E V
Sbjct: 91 REMADLDGGEIALHVVERGPGGDHGAGLGGDDAATEGEPAAGVGNAGTEPWVVVLEVVLA 150
Query: 135 VASVGENFSGAFVGDGEGEDGEDEEEDDEKEHDEKVNPEKPSHATARADE 171
V G+ + A G GE ED E EE+ DE+EHD +V PE+P A ADE
Sbjct: 151 VDPAGDLGAAAAAGHGEPEDSEAEEDADEEEHDAEVEPERPRDVEAGADE 200
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| ONK69678.1 | 3.1e-23 | 42.47 | uncharacterized protein A4U43_C05F25580 [Asparagus officinalis] | [more] |
| OAY76094.1 | 2.1e-16 | 36.79 | WAT1-related protein [Ananas comosus] | [more] |
| CAA2615004.1 | 4.8e-08 | 32.35 | unnamed protein product [Spirodela intermedia] | [more] |
| CAA7389445.1 | 8.1e-08 | 32.35 | unnamed protein product [Spirodela intermedia] | [more] |
| EYU39587.1 | 7.1e-04 | 30.43 | hypothetical protein MIMGU_mgv1a013325mg [Erythranthe guttata] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5P1EUF8 | 1.5e-23 | 42.47 | Uncharacterized protein OS=Asparagus officinalis OX=4686 GN=A4U43_C05F25580 PE=4... | [more] |
| A0A199VG59 | 1.0e-16 | 36.79 | WAT1-related protein OS=Ananas comosus OX=4615 GN=ACMD2_24744 PE=4 SV=1 | [more] |
| A0A7C9ERC8 | 8.2e-14 | 33.33 | Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | [more] |
| A0A3N6S050 | 1.0e-11 | 52.33 | Uncharacterized protein (Fragment) OS=Brassica cretica OX=69181 GN=DY000_0000275... | [more] |
| A0A7I8IAL1 | 2.3e-08 | 32.35 | Hypothetical protein OS=Spirodela intermedia OX=51605 GN=SI7747_01001367 PE=4 SV... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
