CmUC06G120010 (gene) Watermelon (USVL531) v1

Overview
NameCmUC06G120010
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr06: 23559133 .. 23561269 (-)
RNA-Seq ExpressionCmUC06G120010
SyntenyCmUC06G120010
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAGCATCACCCACCAAGTTACCACTTGTACTCCTACTCTGCATTGTCATTTTAGCATCATTAGTAACGGCTCATCCAGGAACTGTGGCAGCACCGGCGCCTAATCCGTTGGTAACAAAGGATTGCATATCATTTGTTCCTATGGCGACAAAATGTGTGATTGATGTGCTCAAGAATGTAGTTGCTCCTCATCCTTCTTGTTGCGAAGCTATTTCTAAACTCTATGAGTGTTCCTCCGAGTTTCTCAAAGACATTCCCTCTGGCGATATGATTTTGGTTAAGAGTGTTTGTGCTCTGTGGGGAGTTTCTATTTTTTAAACTAAAAGTTGTTTGACTTAATTTGATGAAGATGAATAAGAAAGTTATCCATGGATCAGTGATGTTTTTTTTTTTTTTTAATGTCTTTGTTTTCGAAGTATTTAGCTAGATTATACGAGGAAGTTGGTTGTTTTTTTAAATAAAACTATATTTCCCGTTGGATGAGAAAATAACTTTTTCCTAAAAATTCGAAAGGGAAATTTGTGACTCTAATCGAAAACTTTACACATACTCAAACATTGATATTATATATTATATGATAGATTTTAGAACCAAGAATGACACTCATTATTCATGGAAGAGTGTATTGCAACGGTTATCGGTTATGAACAAGGATTGGAGTTGTGTAGCAAGTCAAATTATATGTGTCATTAATGTCAATTCAATAACTATATAGTCAATCTCGTAATTTTCTTATAAAAAATTAATGATAAATTAAATATATTTACCGTAGCATAAATGGCAGTCCCTTCATGTTATGTTAGAGTTTTAAATTCCCAAGATCAACTTCTTGTACTTGGAAAAAAAAACACTAAAATGAAACTTAGTCCATTTATATTAGTATGAGACATTTATCAAATTAATCTTTTCCTGGGGGAAACATTTATCAAAGGGTTGAATATTCAAATCACTAAATTTTATGCTCAATTTTAATTTTAAAAAATATTCATTCTGTTCAATATAATTAGCAAAATCTTAACATTGAAAAGGAAAGGAAATAGTTGATAAATAAAAGGGAAAAGGAAGAGAAACAAAAAAAAAAAAAAAAATGGTTATAAATAGAAAAAATATCAAACTATTTATAAATATATCAAAATTTCATGATAAACCATCGATGTCTATTTGGTAAAGTGAAAGATGTCATCTGAGTCTATTACGGTCTATCATAGATAAAAAGTAAATTTTGTTGTAATTATTTTTAATAATTTTTTTATTATTTAAAAAATTTCAATAGAATAATTCATTTAAATTGAACAAACTACAAATTTAACTTTCATATATATTAAATTTGTTGGTAGAACATCATTTAATTTTGTGGTTTTTATCTAATTTGAAGTTTCTAACCATGAGTTTAACCTACATAATTAAATCTATTTTTTATGTTTCAATTTTGAAGAATGTTTCACTTTTCTTTCTCTCATTGTAAATATCTAACACTCTGATAGGATGAGTTTACAGCATAATTAAATCCATAACTTCTTAAAAATTAAACTTGAATTTTTTTTTTTAAATTCAAAGGGACTGTTACTTCAACAATAAGTGAATGAATCCATCAACATTAATAATGACTGTTTCCTTTACCAAAAAATGGTTACCCAAACAATATAATTGCAGTTTTCAATTGCAATAATGACCCCAAATGTTTCCAAATTTAATATCTTCCCCTAACCTTCCTTAGTCTCCAATTTTCTCCCACCAACCAAACACAGCTACTCCCTTAACCCACAAAAACAAACACACACCTAATTCAATCCTTCTTGAACCTTTTTCACACCCAAATTGAAACCATGGCGTAATTTAATGCATCTACAATGAAGTTACCACTTGTATTCTTAGTCTACATAGTCATTTTAGCATCACCCCCACGTCGCCTGATTCGACCACATTAGAAGATTTCTCATTGTTGGGCTGCACATCTTTTATTTTCGAGGCGACAAGATGTGTGATTGATGTGATAAAGAACGCTATTGCTCCTCATCCATCATGTTGCAAAGCCATTTCTAAGCTTAACGATTGTTACTCGGAGTTTCTCAAAGACATTCCATCTGCTGACATGATTTTAATTAAGGGCATTTGTGCTTTGTGGGGTGTTTGA

mRNA sequence

ATGGCAGCATCACCCACCAAGTTACCACTTGTACTCCTACTCTGCATTGTCATTTTAGCATCATTAGTAACGGCTCATCCAGGAACTGTGGCAGCACCGGCGCCTAATCCGTTGGTAACAAAGGATTGCATATCATTTGTTCCTATGGCGACAAAATGTGTGATTGATGTGCTCAAGAATGTAGTTGCTCCTCATCCTTCTTGTTGCGAAGCTATTTCTAAACTCTATGAGTGTTCCTCCGAGTTTCTCAAAGACATTCCCTCTGGCGATATGATTTTGGTTAAGAGTGTTTGTGCTCTTCTACATAGTCATTTTAGCATCACCCCCACGTCGCCTGATTCGACCACATTAGAAGATTTCTCATTGTTGGGCTGCACATCTTTTATTTTCGAGGCGACAAGATGTGTGATTGATGTGATAAAGAACGCTATTGCTCCTCATCCATCATGTTGCAAAGCCATTTCTAAGCTTAACGATTGTTACTCGGAGTTTCTCAAAGACATTCCATCTGCTGACATGATTTTAATTAAGGGCATTTGTGCTTTGTGGGGTGTTTGA

Coding sequence (CDS)

ATGGCAGCATCACCCACCAAGTTACCACTTGTACTCCTACTCTGCATTGTCATTTTAGCATCATTAGTAACGGCTCATCCAGGAACTGTGGCAGCACCGGCGCCTAATCCGTTGGTAACAAAGGATTGCATATCATTTGTTCCTATGGCGACAAAATGTGTGATTGATGTGCTCAAGAATGTAGTTGCTCCTCATCCTTCTTGTTGCGAAGCTATTTCTAAACTCTATGAGTGTTCCTCCGAGTTTCTCAAAGACATTCCCTCTGGCGATATGATTTTGGTTAAGAGTGTTTGTGCTCTTCTACATAGTCATTTTAGCATCACCCCCACGTCGCCTGATTCGACCACATTAGAAGATTTCTCATTGTTGGGCTGCACATCTTTTATTTTCGAGGCGACAAGATGTGTGATTGATGTGATAAAGAACGCTATTGCTCCTCATCCATCATGTTGCAAAGCCATTTCTAAGCTTAACGATTGTTACTCGGAGTTTCTCAAAGACATTCCATCTGCTGACATGATTTTAATTAAGGGCATTTGTGCTTTGTGGGGTGTTTGA

Protein sequence

MAASPTKLPLVLLLCIVILASLVTAHPGTVAAPAPNPLVTKDCISFVPMATKCVIDVLKNVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCALLHSHFSITPTSPDSTTLEDFSLLGCTSFIFEATRCVIDVIKNAIAPHPSCCKAISKLNDCYSEFLKDIPSADMILIKGICALWGV
Homology
[Close]
BLAST of CmUC06G120010 vs. NCBI nr
Match: TYK10345.1 (hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa])

HSP 1 Score: 133.3 bits (334), Expect = 2.2e-27
Identity = 71/96 (73.96%), Postives = 77/96 (80.21%), Query Frame = 0 

Query: 6   TKLPLVLLLCIVILASLVTAHPGTVAA--PAPNPLVTKDCISFVPMATKCVIDVLKNVVA 65
           TKLPLVLL+CI ILAS VTA P  VAA  P         CISFVP ATKCVIDVLKN VA
Sbjct: 7   TKLPLVLLVCIAILASSVTARPTIVAAATPTSEDFSLFPCISFVPKATKCVIDVLKNAVA 66

Query: 66  PHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA 100
           PHPSCCEAIS+L++CSS+FLKDIPS DMILVKS+CA
Sbjct: 67  PHPSCCEAISQLHDCSSQFLKDIPSSDMILVKSICA 102

[Close]
BLAST of CmUC06G120010 vs. NCBI nr
Match: KAA0050065.1 (hypothetical protein E6C27_scaffold675G00460 [Cucumis melo var. makuwa])

HSP 1 Score: 133.3 bits (334), Expect = 2.2e-27
Identity = 73/101 (72.28%), Postives = 82/101 (81.19%), Query Frame = 0 

Query: 1   MAASPTKLPLVLLLCIVILASLVTAHPGTVAAPAPNPLVTK-DCISFVPMATKCVIDVLK 60
           MAAS TKLPL LL CI ILAS V A P TVAA AP   ++   C SFVP AT+CVIDVLK
Sbjct: 1   MAASFTKLPLALLFCIFILASSVMARPVTVAAAAPEGDISLFPCKSFVPKATECVIDVLK 60

Query: 61  NVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCAL 101
           N VAPHPSCC+AIS+L++CSS+FLKDIPS DMILVKS+CAL
Sbjct: 61  NAVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICAL 101

[Close]
BLAST of CmUC06G120010 vs. NCBI nr
Match: TYK10343.1 (hypothetical protein E5676_scaffold367G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 132.9 bits (333), Expect = 2.9e-27
Identity = 73/101 (72.28%), Postives = 81/101 (80.20%), Query Frame = 0 

Query: 1   MAASPTKLPLVLLLCIVILASLVTAHPGTVAAPAP-NPLVTKDCISFVPMATKCVIDVLK 60
           MAAS TKLPL LL CI ILAS V A P TVAA AP   +    C SFVP AT+CVIDVLK
Sbjct: 1   MAASFTKLPLALLFCIFILASSVMARPVTVAAAAPIGDISLFPCKSFVPKATECVIDVLK 60

Query: 61  NVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCAL 101
           N VAPHPSCC+AIS+L++CSS+FLKDIPS DMILVKS+CAL
Sbjct: 61  NAVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICAL 101

[Close]
BLAST of CmUC06G120010 vs. NCBI nr
Match: KAA0050063.1 (hypothetical protein E6C27_scaffold675G00440 [Cucumis melo var. makuwa])

HSP 1 Score: 132.5 bits (332), Expect = 3.7e-27
Identity = 72/99 (72.73%), Postives = 81/99 (81.82%), Query Frame = 0 

Query: 6   TKLPLVLLLCIVILASLVTAHPGTVAAPAPNPLVTKD-----CISFVPMATKCVIDVLKN 65
           TKLPL+LL+CI ILAS VTA P  VAA  P   ++KD     CISFVPMATK VIDVLKN
Sbjct: 7   TKLPLILLVCIAILASSVTARPTIVAAATP---ISKDFSLFPCISFVPMATKRVIDVLKN 66

Query: 66  VVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA 100
            VAPHPSCCEAIS+L++CSS+FLKDIPS DMILVKS+CA
Sbjct: 67  AVAPHPSCCEAISQLHDCSSQFLKDIPSDDMILVKSICA 102

[Close]
BLAST of CmUC06G120010 vs. NCBI nr
Match: KAA0050079.1 (hypothetical protein E6C27_scaffold675G00630 [Cucumis melo var. makuwa])

HSP 1 Score: 132.5 bits (332), Expect = 3.7e-27
Identity = 71/96 (73.96%), Postives = 78/96 (81.25%), Query Frame = 0 

Query: 6   TKLPLVLLLCIVILASLVTAHPGTVAA--PAPNPLVTKDCISFVPMATKCVIDVLKNVVA 65
           TKLPLVL +CI ILAS VTA P  VAA  P         CISFVP ATKCVIDVLKNVVA
Sbjct: 7   TKLPLVLRVCIAILASSVTACPTIVAAATPTSEDFSLFPCISFVPKATKCVIDVLKNVVA 66

Query: 66  PHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA 100
           PHPSCCEAI++L++CSS+FLKDIPSGDMILVKS+CA
Sbjct: 67  PHPSCCEAITQLHDCSSQFLKDIPSGDMILVKSICA 102

[Close]
BLAST of CmUC06G120010 vs. ExPASy TrEMBL
Match: A0A5A7U8Y3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00460 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.1e-27
Identity = 73/101 (72.28%), Postives = 82/101 (81.19%), Query Frame = 0 

Query: 1   MAASPTKLPLVLLLCIVILASLVTAHPGTVAAPAPNPLVTK-DCISFVPMATKCVIDVLK 60
           MAAS TKLPL LL CI ILAS V A P TVAA AP   ++   C SFVP AT+CVIDVLK
Sbjct: 1   MAASFTKLPLALLFCIFILASSVMARPVTVAAAAPEGDISLFPCKSFVPKATECVIDVLK 60

Query: 61  NVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCAL 101
           N VAPHPSCC+AIS+L++CSS+FLKDIPS DMILVKS+CAL
Sbjct: 61  NAVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICAL 101

[Close]
BLAST of CmUC06G120010 vs. ExPASy TrEMBL
Match: A0A5D3CFS6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00210 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 1.1e-27
Identity = 71/96 (73.96%), Postives = 77/96 (80.21%), Query Frame = 0 

Query: 6   TKLPLVLLLCIVILASLVTAHPGTVAA--PAPNPLVTKDCISFVPMATKCVIDVLKNVVA 65
           TKLPLVLL+CI ILAS VTA P  VAA  P         CISFVP ATKCVIDVLKN VA
Sbjct: 7   TKLPLVLLVCIAILASSVTARPTIVAAATPTSEDFSLFPCISFVPKATKCVIDVLKNAVA 66

Query: 66  PHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA 100
           PHPSCCEAIS+L++CSS+FLKDIPS DMILVKS+CA
Sbjct: 67  PHPSCCEAISQLHDCSSQFLKDIPSSDMILVKSICA 102

[Close]
BLAST of CmUC06G120010 vs. ExPASy TrEMBL
Match: A0A5D3CEQ4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00180 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.4e-27
Identity = 73/101 (72.28%), Postives = 81/101 (80.20%), Query Frame = 0 

Query: 1   MAASPTKLPLVLLLCIVILASLVTAHPGTVAAPAP-NPLVTKDCISFVPMATKCVIDVLK 60
           MAAS TKLPL LL CI ILAS V A P TVAA AP   +    C SFVP AT+CVIDVLK
Sbjct: 1   MAASFTKLPLALLFCIFILASSVMARPVTVAAAAPIGDISLFPCKSFVPKATECVIDVLK 60

Query: 61  NVVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCAL 101
           N VAPHPSCC+AIS+L++CSS+FLKDIPS DMILVKS+CAL
Sbjct: 61  NAVAPHPSCCQAISELHDCSSQFLKDIPSVDMILVKSICAL 101

[Close]
BLAST of CmUC06G120010 vs. ExPASy TrEMBL
Match: A0A5A7U2D8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00440 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.8e-27
Identity = 72/99 (72.73%), Postives = 81/99 (81.82%), Query Frame = 0 

Query: 6   TKLPLVLLLCIVILASLVTAHPGTVAAPAPNPLVTKD-----CISFVPMATKCVIDVLKN 65
           TKLPL+LL+CI ILAS VTA P  VAA  P   ++KD     CISFVPMATK VIDVLKN
Sbjct: 7   TKLPLILLVCIAILASSVTARPTIVAAATP---ISKDFSLFPCISFVPMATKRVIDVLKN 66

Query: 66  VVAPHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA 100
            VAPHPSCCEAIS+L++CSS+FLKDIPS DMILVKS+CA
Sbjct: 67  AVAPHPSCCEAISQLHDCSSQFLKDIPSDDMILVKSICA 102

[Close]
BLAST of CmUC06G120010 vs. ExPASy TrEMBL
Match: A0A5A7U9B0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00630 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 1.8e-27
Identity = 71/96 (73.96%), Postives = 78/96 (81.25%), Query Frame = 0 

Query: 6   TKLPLVLLLCIVILASLVTAHPGTVAA--PAPNPLVTKDCISFVPMATKCVIDVLKNVVA 65
           TKLPLVL +CI ILAS VTA P  VAA  P         CISFVP ATKCVIDVLKNVVA
Sbjct: 7   TKLPLVLRVCIAILASSVTACPTIVAAATPTSEDFSLFPCISFVPKATKCVIDVLKNVVA 66

Query: 66  PHPSCCEAISKLYECSSEFLKDIPSGDMILVKSVCA 100
           PHPSCCEAI++L++CSS+FLKDIPSGDMILVKS+CA
Sbjct: 67  PHPSCCEAITQLHDCSSQFLKDIPSGDMILVKSICA 102

The following BLAST results are available for this feature:
BLAST of CmUC06G120010 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK10345.12.2e-2773.96hypothetical protein E5676_scaffold367G00210 [Cucumis melo var. makuwa][more]
KAA0050065.12.2e-2772.28hypothetical protein E6C27_scaffold675G00460 [Cucumis melo var. makuwa][more]
TYK10343.12.9e-2772.28hypothetical protein E5676_scaffold367G00180 [Cucumis melo var. makuwa][more]
KAA0050063.13.7e-2772.73hypothetical protein E6C27_scaffold675G00440 [Cucumis melo var. makuwa][more]
KAA0050079.13.7e-2773.96hypothetical protein E6C27_scaffold675G00630 [Cucumis melo var. makuwa][more]
BLAST of CmUC06G120010 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC06G120010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U8Y31.1e-2772.28Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3CFS61.1e-2773.96Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3CEQ41.4e-2772.28Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U2D81.8e-2772.73Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7U9B01.8e-2773.96Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of CmUC06G120010 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC06G120010.1CmUC06G120010.1mRNA