CmUC06G119220 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC06G119220
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Ribosome biogenesis regulatory protein
Location	CmU531Chr06: 22350591 .. 22353419 (-)
RNA-Seq Expression	CmUC06G119220
Synteny	CmUC06G119220

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGACCCAGCAGCAAGTTCACGTCGACATTGCTCATCTCATGGCACTCAATCCTCACCACAATCTTATCTCCCCGCCGTCCTCTAGGTTAGTCTCTGCCCCTTCCAACAATCTCTTCTGCAGAGCACGTCTACATCAGCTGTAGTTGCTACATGGATTAGGTTCGCATTGTTTCGGAAGTTTTTTTTTTTCTCTGAATTCAATGGGACTTTGGTACTGCCCTTCGTTTCTCTTGATTGACATCTTTGAACCGGATATTGGCATTGAGGAACAATGCCTGGAAATTCTGTATATTTGGTTATTATTGGCTGTGTTTCGACAAATTACTGAAAACATGTTATCGAGAAGAATTCGATAATTAGAGAAAACTGTGATGTACTCAATATCTGAACCTACCATCTTTGAGGGTTTTAGTTGTTTAGAATAGGTTAAATTACAAATTTGGTTAGGAGAAAATTAGAATTTAGTTAGTCCCTTTGGTTTGATAAAACCGTCTTAAATAGTCCATAGGGTAAGACTATTTCTGAGAATATTATCAGACAAATTTTGTGGGGACTGATTAAATTCTAAATTTTAAAACTATTGGGACTAAATTCTATACATTTTTAAAATGGTTGGACCCAATTTGGCCTTTAGAATTAAGTACATTATTTAAACACATTGGCGCATACATACATATCTATGTTATTTGAAGAGAATCTTCACTGTTTTTGGTTTGTAACTTTTATAATTACAGGGAGGAGTTAGTGAATGAATGCATACAGAAGGGTACGGAGCTAGTTCAAGCTATTGCGAATGAACTTTTCTTCCTGCCCTCAACTGAAGCCAAAGATGGTCTTCTAGTGGAGTTGCCTCCACCTAAAACAAGATTGCCTAGGGAGAAGCATGTAAGCCCTTTAATATTTAATATTTTTGTTGATCTTCTCATTGTCGCTTTTAAACTTTGGATGTTTACATTTTTGGTTGATGTAACTATTTTCTTGCTTTCCAGCTTCCAAAGCCTAAGCCTCCTACAAAATGGGAACTTTTTGCTAAAAAAAAAGGTCGGCCATTTTTGTTCTGGTTTCATCTGTTTTTGTGCTGTTCTGTTTTGTATTGAAATATTCATATTTCCAACCATTTAATTGTGTGGCTTGAATTGAATTGAGCTGAAAGGCTGACTTGCTGTAAAGCAAAAACTGGTAAAAAGAGGAGAGGCACAATCCGGTCAAATACAAGACTTTGGAGTTTCTTGGGTGGAATTTAATTTTTAGTACTTTGCCACTTTTGCAGGTATAAAGATCATTAAAAAAACTAAGCACGTGTTTGATAAAAATACTCATACATGGAAGCGTTGCTATGGTTATGATCGTGCAAATGATGAGAAGAACATACCCATCCTTAAGTCCAAGATGACTGATGGTATTATTTAATATAACCTTGCATTTTAATATGAGCCACTTTTCTTTTTGTTAGTTATATGTCTTTTTATCTTACTCTGCGTGTTGTCAAATTTCTGAACATGATAACTTTGACAGAGATAATTTGAATATTGATTATTTATATTACTTGCCATCCATGCTCAATTAATACAAATCTCAAAATGTCCATTAAGTGTCATGCTTTTTGTTGCAGAGCCGGGCGTGGATCCCTTTGCCGAGAGGCGAGCAAAAAAGAGGCAACGAATTGAAAAGCAAGAAAAGAATCGCTTACAGAATCTGAAACAAGCTGCGAAAATGGGTGCTTTGCCAAGGTTTTACCCTCTTGTCACAGTTATTGGATGTTGGTCAAGTAACTAGATAAAATCTTCTCACTTTGCAGACCTTCATTTTCCTTTTCTCCTTCCCTCTCGTACAAGAATATTATAGCATGCTAATGCATACATTTGGGTCATTGAATTTCATCGATAATGTCGGGTGGATTATTTGACCACATATTGTACCAGTTTAACCCATTGATTTGTGCCATTCGTTTCCGAAAATATCATATTGTCTTAACTCCGTCTTTTGATTTTCATCATTTTTCTGTTGTATATAACCAAGTTGATTAAACTCATGCAGCCATGTTCAACTAGCTGCAACTGCTTTGCCCATAACAGGGACACAAGCTGCAACAAAGAAAATCACAAAAGATGAGCTTGGAAATGTGGCTGGAATAGCTGCAACCGCAACGGCTACTGGTGGAAAATTCGACAAGAAGTTGCCTGGGGAAAAGCCTCCAAAGCATGAAGGAAAATATCGCAAGGTTAGCTAAACAAACCTTTTCCATGGACAAAAACATATAACAATCCTTCTCCTTGGCATGCTGGGGTATATTATATACTATCACAAAGTTACATATTTTGTCATTCATTTATATGCAGTTTTTGCCTGTTGTGGAAGGAACGGGTATTGGGTCTCAAGAAAAGGAGCAAACTGAGAAAGTCCTGAACCGACTAATATCCAAGAATTCACATGAGATACTAAACATCAATAAGGTCTTTTTATTTATAGTTCTTTGTTGAAATTAATCATCATTGAAATTTGTCTAATGGTCTTCACTAATTATGCTAATTATAGGCTGTCAACGTGTGCAATGTGAAAAGAGAAAAGAAGCGAACACATGAACGTAGAAAGCCCTCATCATCAACATCGAGCAAGTTGAAACCAAATAAGAAACTTCAAAAGAAGTCACTGAAGAAGGGAAAGGCAAACTGAAGTTAATCTCAGTATTTTATTTAGAGTTTTTTGTTCTACACTATCTTCTTTATGCAAGAAATTTTGCATTTGGCTGCCTATTAGTTATCTTCTCCATTTAAAGAACTAAAACTAGTTATTTAGCACGTGCAAAAAAGCACGCTTATATATTC

mRNA sequence

ATGGAGACCCAGCAGCAAGTTCACGTCGACATTGCTCATCTCATGGCACTCAATCCTCACCACAATCTTATCTCCCCGCCGTCCTCTAGGTTAGTCTCTGCCCCTTCCAACAATCTCTTCTGCAGAGCACGTCTACATCAGCTGGAGGAGTTAGTGAATGAATGCATACAGAAGGGTACGGAGCTAGTTCAAGCTATTGCGAATGAACTTTTCTTCCTGCCCTCAACTGAAGCCAAAGATGGTCTTCTAGTGGAGTTGCCTCCACCTAAAACAAGATTGCCTAGGGAGAAGCATCTTCCAAAGCCTAAGCCTCCTACAAAATGGGAACTTTTTGCTAAAAAAAAAGGTCGGCCATTTTTGTTCTGGTTTCATCTGTTTTTGTGCTGTATAAAGATCATTAAAAAAACTAAGCACGTGTTTGATAAAAATACTCATACATGGAAGCGTTGCTATGGTTATGATCGTGCAAATGATGAGAAGAACATACCCATCCTTAAGTCCAAGATGACTGATGAGCCGGGCGTGGATCCCTTTGCCGAGAGGCGAGCAAAAAAGAGGCAACGAATTGAAAAGCAAGAAAAGAATCGCTTACAGAATCTGAAACAAGCTGCGAAAATGGGTGCTTTGCCAAGCCATGTTCAACTAGCTGCAACTGCTTTGCCCATAACAGGGACACAAGCTGCAACAAAGAAAATCACAAAAGATGAGCTTGGAAATGTGGCTGGAATAGCTGCAACCGCAACGGCTACTGGTGGAAAATTCGACAAGAAGTTGCCTGGGGAAAAGCCTCCAAAGCATGAAGGAAAATATCGCAAGTTTTTGCCTGTTGTGGAAGGAACGGGTATTGGGTCTCAAGAAAAGGAGCAAACTGAGAAAGTCCTGAACCGACTAATATCCAAGAATTCACATGAGATACTAAACATCAATAAGGCTGTCAACGTGTGCAATGTGAAAAGAGAAAAGAAGCGAACACATGAACGTAGAAAGCCCTCATCATCAACATCGAGCAAGTTGAAACCAAATAAGAAACTTCAAAAGAAGTCACTGAAGAAGGGAAAGGCAAACTGAAGTTAATCTCAGTATTTTATTTAGAGTTTTTTGTTCTACACTATCTTCTTTATGCAAGAAATTTTGCATTTGGCTGCCTATTAGTTATCTTCTCCATTTAAAGAACTAAAACTAGTTATTTAGCACGTGCAAAAAAGCACGCTTATATATTC

Coding sequence (CDS)

ATGGAGACCCAGCAGCAAGTTCACGTCGACATTGCTCATCTCATGGCACTCAATCCTCACCACAATCTTATCTCCCCGCCGTCCTCTAGGTTAGTCTCTGCCCCTTCCAACAATCTCTTCTGCAGAGCACGTCTACATCAGCTGGAGGAGTTAGTGAATGAATGCATACAGAAGGGTACGGAGCTAGTTCAAGCTATTGCGAATGAACTTTTCTTCCTGCCCTCAACTGAAGCCAAAGATGGTCTTCTAGTGGAGTTGCCTCCACCTAAAACAAGATTGCCTAGGGAGAAGCATCTTCCAAAGCCTAAGCCTCCTACAAAATGGGAACTTTTTGCTAAAAAAAAAGGTCGGCCATTTTTGTTCTGGTTTCATCTGTTTTTGTGCTGTATAAAGATCATTAAAAAAACTAAGCACGTGTTTGATAAAAATACTCATACATGGAAGCGTTGCTATGGTTATGATCGTGCAAATGATGAGAAGAACATACCCATCCTTAAGTCCAAGATGACTGATGAGCCGGGCGTGGATCCCTTTGCCGAGAGGCGAGCAAAAAAGAGGCAACGAATTGAAAAGCAAGAAAAGAATCGCTTACAGAATCTGAAACAAGCTGCGAAAATGGGTGCTTTGCCAAGCCATGTTCAACTAGCTGCAACTGCTTTGCCCATAACAGGGACACAAGCTGCAACAAAGAAAATCACAAAAGATGAGCTTGGAAATGTGGCTGGAATAGCTGCAACCGCAACGGCTACTGGTGGAAAATTCGACAAGAAGTTGCCTGGGGAAAAGCCTCCAAAGCATGAAGGAAAATATCGCAAGTTTTTGCCTGTTGTGGAAGGAACGGGTATTGGGTCTCAAGAAAAGGAGCAAACTGAGAAAGTCCTGAACCGACTAATATCCAAGAATTCACATGAGATACTAAACATCAATAAGGCTGTCAACGTGTGCAATGTGAAAAGAGAAAAGAAGCGAACACATGAACGTAGAAAGCCCTCATCATCAACATCGAGCAAGTTGAAACCAAATAAGAAACTTCAAAAGAAGTCACTGAAGAAGGGAAAGGCAAACTGA

Protein sequence

METQQQVHVDIAHLMALNPHHNLISPPSSRLVSAPSNNLFCRARLHQLEELVNECIQKGTELVQAIANELFFLPSTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFLFWFHLFLCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAERRAKKRQRIEKQEKNRLQNLKQAAKMGALPSHVQLAATALPITGTQAATKKITKDELGNVAGIAATATATGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGIGSQEKEQTEKVLNRLISKNSHEILNINKAVNVCNVKREKKRTHERRKPSSSTSSKLKPNKKLQKKSLKKGKAN

Homology

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BLAST of CmUC06G119220 vs. NCBI nr
Match: XP_022961058.1 (ribosome biogenesis regulatory protein homolog [Cucurbita moschata])

HSP 1 Score: 492.3 bits (1266), Expect = 3.6e-135
Identity = 266/354 (75.14%), Postives = 295/354 (83.33%), Query Frame = 0


Query: 1   METQQQVHVDIAHLMALNPHHNLISPPSSRLVSAPSNNLFCRARLHQLEELVNECIQKGT 60
           MET Q+V VDI HLMA NPHH+  SPPSSR                  EELVNEC+QKGT
Sbjct: 1   METPQEVQVDIGHLMAFNPHHHFTSPPSSR------------------EELVNECLQKGT 60

Query: 61  ELVQAIANELFFLPSTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFL 120
           ELVQAIANELF LPSTE +DG LV+L  PKT+LPREK LPKPK PTKWELFAKK+G    
Sbjct: 61  ELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRG---- 120

Query: 121 FWFHLFLCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAE 180
                    IK  KK K ++D+ T TWKR +GYDRANDE+NIPI+++KMTDEPGVDPFA+
Sbjct: 121 ---------IKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAK 180

Query: 181 RRAKKRQRIEKQEKNRLQNLKQAAKMGALPSHVQLAATALPITGTQAATKKITKDELGNV 240
           R+  KR+R+EKQE NRLQNLKQAAK+GALPSHVQLAATALPITGTQAATKKITKDELGNV
Sbjct: 181 RQENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQAATKKITKDELGNV 240

Query: 241 AGIAATATATGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGIGSQEKEQTEKVLNRLISK 300
           AG+AATATA+GGKFDKKLPGEKPPKHEGKYRKFLPVVEGTG+GS+E+EQTEKVLNRLISK
Sbjct: 241 AGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISK 300

Query: 301 NSHEILNINKAVNVCNVKREKKRTHERRKPSSSTSSKLKPNKKLQKKSLKKGKA 355
           NSHEILNINKAVN+ NVKREK+R H+ RKPSSSTSSKLKPNKKLQKK LKKG +
Sbjct: 301 NSHEILNINKAVNMYNVKREKRRKHDDRKPSSSTSSKLKPNKKLQKKPLKKGSS 323

[Close]

BLAST of CmUC06G119220 vs. NCBI nr
Match: XP_023515967.1 (ribosome biogenesis regulatory protein homolog isoform X1 [Cucurbita pepo subsp. pepo] >XP_023515969.1 ribosome biogenesis regulatory protein homolog isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 490.3 bits (1261), Expect = 1.4e-134
Identity = 264/354 (74.58%), Postives = 294/354 (83.05%), Query Frame = 0


Query: 1   METQQQVHVDIAHLMALNPHHNLISPPSSRLVSAPSNNLFCRARLHQLEELVNECIQKGT 60
           MET Q+V VDI HLMA NPHH+  SPPSSR                  EELVNEC+QKGT
Sbjct: 1   METPQEVQVDIGHLMAFNPHHHFTSPPSSR------------------EELVNECLQKGT 60

Query: 61  ELVQAIANELFFLPSTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFL 120
           ELVQAIANELF LPSTE +DG LV+L  PKT+LPREK LPKPK PTKWELFAKK+G    
Sbjct: 61  ELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRG---- 120

Query: 121 FWFHLFLCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAE 180
                    IK  KK K ++D+ T TWKR +GYDRANDE+NIPI+++KMTDEPGVDPFA+
Sbjct: 121 ---------IKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAK 180

Query: 181 RRAKKRQRIEKQEKNRLQNLKQAAKMGALPSHVQLAATALPITGTQAATKKITKDELGNV 240
           R+  KR+R+EKQE NRLQNLKQAAK+GALPSHVQLAATALPITGTQA TKKITKDELGNV
Sbjct: 181 RQENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQATTKKITKDELGNV 240

Query: 241 AGIAATATATGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGIGSQEKEQTEKVLNRLISK 300
           AG+AATATA+GGKFDKKLPGEKPPKHEGKYRKFLPVVEGTG+GS+E+EQTEKVLNRLISK
Sbjct: 241 AGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISK 300

Query: 301 NSHEILNINKAVNVCNVKREKKRTHERRKPSSSTSSKLKPNKKLQKKSLKKGKA 355
           NSHEILN+NKAVN+ NVKREK+R H+ RKPSSSTSSKLKPNKKLQKK LKKG +
Sbjct: 301 NSHEILNVNKAVNMYNVKREKRRKHDDRKPSSSTSSKLKPNKKLQKKPLKKGSS 323

[Close]

BLAST of CmUC06G119220 vs. NCBI nr
Match: XP_022144805.1 (ribosome biogenesis regulatory protein homolog [Momordica charantia])

HSP 1 Score: 487.6 bits (1254), Expect = 8.8e-134
Identity = 261/355 (73.52%), Postives = 295/355 (83.10%), Query Frame = 0


Query: 1   METQQQVHVDIAHLMALNPHHNLISPPSSRLVSAPSNNLFCRARLHQLEELVNECIQKGT 60
           ME QQQ+ VD+ HLMA NPHH+L SPPSSR                  EELVNEC+QKGT
Sbjct: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSR------------------EELVNECLQKGT 60

Query: 61  ELVQAIANELFFLPSTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFL 120
           ELVQAIANELF LPSTE +DG LV LPPPKTRLPREKHLPKPKPPTKWELFAKK+G    
Sbjct: 61  ELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRG---- 120

Query: 121 FWFHLFLCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAE 180
                    IK  KK K  +D+ T TWKR +GYDRANDE+NIPI+++KMTDEPG+DPFAE
Sbjct: 121 ---------IKNRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAE 180

Query: 181 RRAKKRQRIEKQEKNRLQNLKQAAKMGALPSHVQLAATALPITGTQAATKKITKDELGNV 240
           R++ KR+R+EKQE NRLQNLKQAAK+GALPSHVQLAATALPITGTQ A KK+TKDELGNV
Sbjct: 181 RQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKKMTKDELGNV 240

Query: 241 AGIAATATATGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGIGSQEKEQTEKVLNRLISK 300
           AG+AATATA+GGKFD+KL GEKPPKH+GKYRKFLPVVEGTG+GS+E+EQTE VLNRLISK
Sbjct: 241 AGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISK 300

Query: 301 NSHEILNINKAVNVCNVKREKKRTHERRKPSSSTSSKLKPNKKLQKKSLKKGKAN 356
           NSHEILN+NKA+N+ NVKREK+R H+  KPSSSTSSKLKPNKK QKKS+KKG +N
Sbjct: 301 NSHEILNVNKAINMYNVKREKRRKHD-GKPSSSTSSKLKPNKKPQKKSMKKGVSN 323

[Close]

BLAST of CmUC06G119220 vs. NCBI nr
Match: KAG6589856.1 (Ribosome biogenesis regulatory protein-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 486.9 bits (1252), Expect = 1.5e-133
Identity = 264/354 (74.58%), Postives = 293/354 (82.77%), Query Frame = 0


Query: 1   METQQQVHVDIAHLMALNPHHNLISPPSSRLVSAPSNNLFCRARLHQLEELVNECIQKGT 60
           MET Q+V VDI HLMA NPHH+  SPPSSR                  EELVNEC+QKGT
Sbjct: 1   METPQEVLVDIGHLMAFNPHHHFTSPPSSR------------------EELVNECLQKGT 60

Query: 61  ELVQAIANELFFLPSTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFL 120
           ELVQAIANELF LPSTE +DG LV+L  PKT+LPREK LPKPK PTKWELFAKK+G    
Sbjct: 61  ELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRG---- 120

Query: 121 FWFHLFLCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAE 180
                    IK  KK K ++D+ T TWKR +GYDRANDE+NIPI+++KMTDEPGVDPFA+
Sbjct: 121 ---------IKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAK 180

Query: 181 RRAKKRQRIEKQEKNRLQNLKQAAKMGALPSHVQLAATALPITGTQAATKKITKDELGNV 240
           R+  KR+R+EKQE NRLQNLKQAAK+GALPSHVQLAATALPITGTQA TKKITKDELGNV
Sbjct: 181 RKENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQATTKKITKDELGNV 240

Query: 241 AGIAATATATGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGIGSQEKEQTEKVLNRLISK 300
           AG+AATATA+GGKFDKKLPGEKPPKHEGKYRKFLPVVEGTG+GS+E+EQTEKVLNRLISK
Sbjct: 241 AGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISK 300

Query: 301 NSHEILNINKAVNVCNVKREKKRTHERRKPSSSTSSKLKPNKKLQKKSLKKGKA 355
           NSHEILNINKAVN+ NVKREK+R H+ RKPSSSTSSKLK NKKLQKK LKKG +
Sbjct: 301 NSHEILNINKAVNMYNVKREKRRKHDDRKPSSSTSSKLKANKKLQKKPLKKGSS 323

[Close]

BLAST of CmUC06G119220 vs. NCBI nr
Match: XP_022987784.1 (ribosome biogenesis regulatory protein homolog [Cucurbita maxima])

HSP 1 Score: 485.7 bits (1249), Expect = 3.3e-133
Identity = 262/354 (74.01%), Postives = 293/354 (82.77%), Query Frame = 0


Query: 1   METQQQVHVDIAHLMALNPHHNLISPPSSRLVSAPSNNLFCRARLHQLEELVNECIQKGT 60
           MET Q+V VDI HLMA +PHH+  SPP +R                  EELVNEC+QKGT
Sbjct: 1   METPQEVQVDIGHLMAFDPHHHFTSPPPTR------------------EELVNECLQKGT 60

Query: 61  ELVQAIANELFFLPSTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFL 120
           ELVQAIANELF LPSTE +DG LV+L  PKT+LPREK LPKPK PTKWELFAKK+G    
Sbjct: 61  ELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRG---- 120

Query: 121 FWFHLFLCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAE 180
                    IK  KK K ++D+ T TWKR +GYDRANDE+NIPI+++KMTDEPGVDPFA+
Sbjct: 121 ---------IKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAK 180

Query: 181 RRAKKRQRIEKQEKNRLQNLKQAAKMGALPSHVQLAATALPITGTQAATKKITKDELGNV 240
           R+  KR+R+EKQE NRLQNLKQAAK+GALPSHVQLAATALPITGTQA TKKITKDELGNV
Sbjct: 181 RQENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQATTKKITKDELGNV 240

Query: 241 AGIAATATATGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGIGSQEKEQTEKVLNRLISK 300
           AG+AATATA+GGKFDKKLPGEKPPKHEGKYRKFLPVVEGTG+GS+E+EQTEKVLNRLISK
Sbjct: 241 AGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISK 300

Query: 301 NSHEILNINKAVNVCNVKREKKRTHERRKPSSSTSSKLKPNKKLQKKSLKKGKA 355
           NSHEILNINKAVN+ NVKREK+R H+ RKPSSSTSSKLKPNKKLQKK LKKG +
Sbjct: 301 NSHEILNINKAVNMYNVKREKRRKHDDRKPSSSTSSKLKPNKKLQKKPLKKGSS 323

[Close]

BLAST of CmUC06G119220 vs. ExPASy Swiss-Prot
Match: Q9SH88 (Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana OX=3702 GN=At2g37990 PE=2 SV=2)

HSP 1 Score: 353.2 bits (905), Expect = 3.4e-96
Identity = 198/353 (56.09%), Postives = 250/353 (70.82%), Query Frame = 0


Query: 1   METQQQVHVDIAHLMALNPHHNLISPPSSRLVSAPSNNLFCRARLHQLEELVNECIQKGT 60
           MET+Q   VD+ +L+A NP+H   S PSSR                   ELV E + +GT
Sbjct: 5   METEQIYQVDVGNLLAFNPNHRFPSAPSSR------------------GELVKEILTEGT 64

Query: 61  ELVQAIANELFFLPSTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFL 120
           +LVQ IAN+LF  PSTE  DG +V+LPPP T+LPREKH+P+PKPPTKWE FA KKG    
Sbjct: 65  KLVQEIANKLFNFPSTETNDGPIVQLPPPTTKLPREKHIPRPKPPTKWEEFALKKG---- 124

Query: 121 FWFHLFLCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAE 180
                    I+  KK K V+D+ T+ +KR +GYDR ND+ ++PI+++K +DEPGVDPFA+
Sbjct: 125 ---------IQKRKKEKVVWDEQTNQFKRRHGYDRVNDDNDVPIIEAKESDEPGVDPFAK 184

Query: 181 RRAKKRQRIEKQEKNRLQNLKQAAKMGALPSHVQLAATALPITGTQAATKKITKDELGNV 240
           R   K++R+ KQEKNRLQNLK A K GALPSHVQLAAT+LPI+GT+A  KKI KDELG+V
Sbjct: 185 RLDDKKKRVGKQEKNRLQNLKAAEKAGALPSHVQLAATSLPISGTKAQPKKIGKDELGDV 244

Query: 241 AGIAATATATGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGIGSQEKEQTEKVLNRLISK 300
           AG+AAT+TA+GGKFDKKLPGEKPPK +GK+ K+LPVV G G  + EKEQT  VL+++ SK
Sbjct: 245 AGLAATSTASGGKFDKKLPGEKPPKKQGKHHKYLPVVSGRGDVNAEKEQTNNVLSKIFSK 304

Query: 301 NSHEILNINKAVNVCNVKREKKRTHERRKPSSSTSSKLKPNKKLQKKSLKKGK 354
           +SHEILN+ KA+N+ NVK+EKK+        S  S KLKP K + KK   K K
Sbjct: 305 HSHEILNVGKAINMYNVKKEKKK--------SGRSDKLKPKKDITKKPANKAK 318

[Close]

BLAST of CmUC06G119220 vs. ExPASy Swiss-Prot
Match: Q15050 (Ribosome biogenesis regulatory protein homolog OS=Homo sapiens OX=9606 GN=RRS1 PE=1 SV=2)

HSP 1 Score: 129.4 bits (324), Expect = 8.0e-29
Identity = 97/274 (35.40%), Postives = 150/274 (54.74%), Query Frame = 0


Query: 64  QAIANELFFLPSTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFLFWF 123
           Q + N+L+ LP+   ++ ++  LP P TRLPREK LP+P+P T+W+ FA+ KG       
Sbjct: 70  QLLINQLWQLPTERVEEAIVARLPEPTTRLPREKPLPRPRPLTRWQQFARLKG------- 129

Query: 124 HLFLCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAERRA 183
                 I+  KKT  V+D+ +  W+R +GY RA D+    +++     +P  D FA+R  
Sbjct: 130 ------IRPKKKTNLVWDEVSGQWRRRWGYQRARDDTKEWLIEVPGNADPLEDQFAKRIQ 189

Query: 184 KKRQRIEKQEKNRLQNLKQAAKMGALPSHVQLAATALPITGTQAATKKITKDELGNVAGI 243
            K++R+ K E NRL+NL +A KM  LPS     A  L  TG Q      +K+ELG    +
Sbjct: 190 AKKERVAKNELNRLRNLARAHKM-QLPS-----AAGLHPTGHQ------SKEELGRAMQV 249

Query: 244 AATATATGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGIGSQEKEQTEKVLNRLISKNSH 303
           A  +TA+ G+F ++LP EK P+  GK RKF P+    G  + EK+   ++L  + SK   
Sbjct: 250 AKVSTASVGRFQERLPKEKVPRGSGKKRKFQPLF---GDFAAEKKNQLELLRVMNSKKPQ 309

Query: 304 EILNINKAVNVCNVKREKKRTHERRKPSSSTSSK 338
             L++ +A N    + +++   +RRK S     K
Sbjct: 310 --LDVTRATNKQMREEDQEEAAKRRKMSQKGKRK 313

[Close]

BLAST of CmUC06G119220 vs. ExPASy Swiss-Prot
Match: Q9CYH6 (Ribosome biogenesis regulatory protein homolog OS=Mus musculus OX=10090 GN=Rrs1 PE=1 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 1.0e-28
Identity = 95/274 (34.67%), Postives = 151/274 (55.11%), Query Frame = 0


Query: 64  QAIANELFFLPSTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFLFWF 123
           Q + N+L+ LP+   ++ ++  LP P TRLPREK LP+P+P T+W+ FA+ KG       
Sbjct: 70  QLLINQLWRLPTERVEEAVVARLPEPATRLPREKPLPRPRPLTRWQQFARLKG------- 129

Query: 124 HLFLCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAERRA 183
                 I+  KKT  V+D+ +  W+R +GY RA D+    +++   + +P  D FA+R  
Sbjct: 130 ------IRPKKKTNLVWDEASGQWRRRWGYKRARDDTKEWLIEVPGSADPMEDQFAKRTQ 189

Query: 184 KKRQRIEKQEKNRLQNLKQAAKMGALPSHVQLAATALPITGTQAATKKITKDELGNVAGI 243
            K++R+ K E NRL+NL +A KM  +PS     +  L  TG Q      +K+ELG    +
Sbjct: 190 AKKERVAKNELNRLRNLARAHKM-QMPS-----SAGLHPTGHQ------SKEELGRAMQV 249

Query: 244 AATATATGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGIGSQEKEQTEKVLNRLISKNSH 303
           A  +TA+ G+F ++LP EK P+  GK RKF P+    G  + EK+   ++L  + SK   
Sbjct: 250 AKVSTASVGRFQERLPKEKAPRGSGKKRKFQPLF---GDFAAEKKNQLELLRVMNSKKPR 309

Query: 304 EILNINKAVNVCNVKREKKRTHERRKPSSSTSSK 338
             L++ +A N    + +++   +RRK S     K
Sbjct: 310 --LDVTRATNKQMREEDQEEAAKRRKMSQKGKRK 313

[Close]

BLAST of CmUC06G119220 vs. ExPASy Swiss-Prot
Match: A1A5P2 (Ribosome biogenesis regulatory protein homolog OS=Rattus norvegicus OX=10116 GN=Rrs1 PE=2 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.4e-28
Identity = 95/274 (34.67%), Postives = 151/274 (55.11%), Query Frame = 0


Query: 64  QAIANELFFLPSTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFLFWF 123
           Q + N+L+ LP+   ++ ++  LP P TRLPREK LP+P+P T+W+ FA+ KG       
Sbjct: 70  QLLVNQLWQLPTERVEEAVVARLPEPATRLPREKPLPRPRPLTRWQQFARLKG------- 129

Query: 124 HLFLCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAERRA 183
                 I+  KKT  V+D+ +  W+R +GY RA D+    +++   + +P  D FA+R  
Sbjct: 130 ------IRPKKKTNLVWDEVSGQWRRRWGYKRARDDTKEWLIEVPGSADPMEDQFAKRIR 189

Query: 184 KKRQRIEKQEKNRLQNLKQAAKMGALPSHVQLAATALPITGTQAATKKITKDELGNVAGI 243
            K++R+ K E NRL+NL +A KM  +PS     +  L  TG Q      +K+ELG    +
Sbjct: 190 AKKERVAKNELNRLRNLARAHKM-QMPS-----SAGLHPTGHQ------SKEELGRAMQV 249

Query: 244 AATATATGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGIGSQEKEQTEKVLNRLISKNSH 303
           A  +TA+ G+F ++LP EK P+  GK RKF P+    G  + EK+   ++L  + SK   
Sbjct: 250 AKVSTASVGRFQERLPKEKAPRGSGKKRKFQPLF---GDFAAEKKNQLELLRVMNSKKPQ 309

Query: 304 EILNINKAVNVCNVKREKKRTHERRKPSSSTSSK 338
             L++ +A N    + +++   +RRK S     K
Sbjct: 310 --LDVTRATNKQMREEDQEEAAKRRKMSQKGKKK 313

[Close]

BLAST of CmUC06G119220 vs. ExPASy Swiss-Prot
Match: Q2KIH4 (Ribosome biogenesis regulatory protein homolog OS=Bos taurus OX=9913 GN=RRS1 PE=2 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.3e-28
Identity = 95/274 (34.67%), Postives = 150/274 (54.74%), Query Frame = 0


Query: 64  QAIANELFFLPSTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFLFWF 123
           Q + N+L+ LP+   ++ L+  LP P TRLPREK +P+P+P T+W+ FA+ KG       
Sbjct: 70  QLLINQLWQLPTERVEEALVARLPEPSTRLPREKPVPRPRPLTRWQQFARLKG------- 129

Query: 124 HLFLCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAERRA 183
                 I+  KKT  V+D+ +  W+R +GY RA D+    +++     +P  D FA+R  
Sbjct: 130 ------IRPKKKTNLVWDEVSGRWRRRWGYQRARDDTKEWLIEVPGNADPMEDQFAKRIQ 189

Query: 184 KKRQRIEKQEKNRLQNLKQAAKMGALPSHVQLAATALPITGTQAATKKITKDELGNVAGI 243
            K++R+ K E NRL+NL +A KM  LPS     A  +  TG Q      +K+ELG    +
Sbjct: 190 AKKERVAKNELNRLRNLARAHKM-QLPS-----AAGMHPTGHQ------SKEELGRAMQV 249

Query: 244 AATATATGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGIGSQEKEQTEKVLNRLISKNSH 303
           A  +TA+ G+F ++LP EK P+  GK RKF P+    G  + E++   ++L  + SK   
Sbjct: 250 AKVSTASVGRFQERLPKEKAPRGSGKKRKFQPLF---GDFAAERKSQLEMLRVMNSKKPQ 309

Query: 304 EILNINKAVNVCNVKREKKRTHERRKPSSSTSSK 338
             ++I +A N    + +++   +RRK S     K
Sbjct: 310 --MDITRATNKQMREEDQEEAAKRRKMSQKGKRK 313

[Close]

BLAST of CmUC06G119220 vs. ExPASy TrEMBL
Match: A0A6J1HAS5 (Ribosome biogenesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC111461680 PE=3 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.7e-135
Identity = 266/354 (75.14%), Postives = 295/354 (83.33%), Query Frame = 0


Query: 1   METQQQVHVDIAHLMALNPHHNLISPPSSRLVSAPSNNLFCRARLHQLEELVNECIQKGT 60
           MET Q+V VDI HLMA NPHH+  SPPSSR                  EELVNEC+QKGT
Sbjct: 1   METPQEVQVDIGHLMAFNPHHHFTSPPSSR------------------EELVNECLQKGT 60

Query: 61  ELVQAIANELFFLPSTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFL 120
           ELVQAIANELF LPSTE +DG LV+L  PKT+LPREK LPKPK PTKWELFAKK+G    
Sbjct: 61  ELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRG---- 120

Query: 121 FWFHLFLCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAE 180
                    IK  KK K ++D+ T TWKR +GYDRANDE+NIPI+++KMTDEPGVDPFA+
Sbjct: 121 ---------IKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAK 180

Query: 181 RRAKKRQRIEKQEKNRLQNLKQAAKMGALPSHVQLAATALPITGTQAATKKITKDELGNV 240
           R+  KR+R+EKQE NRLQNLKQAAK+GALPSHVQLAATALPITGTQAATKKITKDELGNV
Sbjct: 181 RQENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQAATKKITKDELGNV 240

Query: 241 AGIAATATATGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGIGSQEKEQTEKVLNRLISK 300
           AG+AATATA+GGKFDKKLPGEKPPKHEGKYRKFLPVVEGTG+GS+E+EQTEKVLNRLISK
Sbjct: 241 AGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISK 300

Query: 301 NSHEILNINKAVNVCNVKREKKRTHERRKPSSSTSSKLKPNKKLQKKSLKKGKA 355
           NSHEILNINKAVN+ NVKREK+R H+ RKPSSSTSSKLKPNKKLQKK LKKG +
Sbjct: 301 NSHEILNINKAVNMYNVKREKRRKHDDRKPSSSTSSKLKPNKKLQKKPLKKGSS 323

[Close]

BLAST of CmUC06G119220 vs. ExPASy TrEMBL
Match: A0A6J1CSP0 (Ribosome biogenesis regulatory protein OS=Momordica charantia OX=3673 GN=LOC111014399 PE=3 SV=1)

HSP 1 Score: 487.6 bits (1254), Expect = 4.3e-134
Identity = 261/355 (73.52%), Postives = 295/355 (83.10%), Query Frame = 0


Query: 1   METQQQVHVDIAHLMALNPHHNLISPPSSRLVSAPSNNLFCRARLHQLEELVNECIQKGT 60
           ME QQQ+ VD+ HLMA NPHH+L SPPSSR                  EELVNEC+QKGT
Sbjct: 1   MENQQQLQVDLGHLMAFNPHHHLTSPPSSR------------------EELVNECLQKGT 60

Query: 61  ELVQAIANELFFLPSTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFL 120
           ELVQAIANELF LPSTE +DG LV LPPPKTRLPREKHLPKPKPPTKWELFAKK+G    
Sbjct: 61  ELVQAIANELFILPSTEDRDGPLVRLPPPKTRLPREKHLPKPKPPTKWELFAKKRG---- 120

Query: 121 FWFHLFLCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAE 180
                    IK  KK K  +D+ T TWKR +GYDRANDE+NIPI+++KMTDEPG+DPFAE
Sbjct: 121 ---------IKNRKKDKIAYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGMDPFAE 180

Query: 181 RRAKKRQRIEKQEKNRLQNLKQAAKMGALPSHVQLAATALPITGTQAATKKITKDELGNV 240
           R++ KR+R+EKQE NRLQNLKQAAK+GALPSHVQLAATALPITGTQ A KK+TKDELGNV
Sbjct: 181 RQSNKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQVAPKKMTKDELGNV 240

Query: 241 AGIAATATATGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGIGSQEKEQTEKVLNRLISK 300
           AG+AATATA+GGKFD+KL GEKPPKH+GKYRKFLPVVEGTG+GS+E+EQTE VLNRLISK
Sbjct: 241 AGMAATATASGGKFDRKLRGEKPPKHKGKYRKFLPVVEGTGVGSREREQTENVLNRLISK 300

Query: 301 NSHEILNINKAVNVCNVKREKKRTHERRKPSSSTSSKLKPNKKLQKKSLKKGKAN 356
           NSHEILN+NKA+N+ NVKREK+R H+  KPSSSTSSKLKPNKK QKKS+KKG +N
Sbjct: 301 NSHEILNVNKAINMYNVKREKRRKHD-GKPSSSTSSKLKPNKKPQKKSMKKGVSN 323

[Close]

BLAST of CmUC06G119220 vs. ExPASy TrEMBL
Match: A0A6J1JJT9 (Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC111485227 PE=3 SV=1)

HSP 1 Score: 485.7 bits (1249), Expect = 1.6e-133
Identity = 262/354 (74.01%), Postives = 293/354 (82.77%), Query Frame = 0


Query: 1   METQQQVHVDIAHLMALNPHHNLISPPSSRLVSAPSNNLFCRARLHQLEELVNECIQKGT 60
           MET Q+V VDI HLMA +PHH+  SPP +R                  EELVNEC+QKGT
Sbjct: 1   METPQEVQVDIGHLMAFDPHHHFTSPPPTR------------------EELVNECLQKGT 60

Query: 61  ELVQAIANELFFLPSTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFL 120
           ELVQAIANELF LPSTE +DG LV+L  PKT+LPREK LPKPK PTKWELFAKK+G    
Sbjct: 61  ELVQAIANELFILPSTEDRDGPLVKLSQPKTKLPREKPLPKPKAPTKWELFAKKRG---- 120

Query: 121 FWFHLFLCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAE 180
                    IK  KK K ++D+ T TWKR +GYDRANDE+NIPI+++KMTDEPGVDPFA+
Sbjct: 121 ---------IKNRKKDKILYDEQTQTWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAK 180

Query: 181 RRAKKRQRIEKQEKNRLQNLKQAAKMGALPSHVQLAATALPITGTQAATKKITKDELGNV 240
           R+  KR+R+EKQE NRLQNLKQAAK+GALPSHVQLAATALPITGTQA TKKITKDELGNV
Sbjct: 181 RQENKRKRVEKQENNRLQNLKQAAKVGALPSHVQLAATALPITGTQATTKKITKDELGNV 240

Query: 241 AGIAATATATGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGIGSQEKEQTEKVLNRLISK 300
           AG+AATATA+GGKFDKKLPGEKPPKHEGKYRKFLPVVEGTG+GS+E+EQTEKVLNRLISK
Sbjct: 241 AGMAATATASGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGVGSREREQTEKVLNRLISK 300

Query: 301 NSHEILNINKAVNVCNVKREKKRTHERRKPSSSTSSKLKPNKKLQKKSLKKGKA 355
           NSHEILNINKAVN+ NVKREK+R H+ RKPSSSTSSKLKPNKKLQKK LKKG +
Sbjct: 301 NSHEILNINKAVNMYNVKREKRRKHDDRKPSSSTSSKLKPNKKLQKKPLKKGSS 323

[Close]

BLAST of CmUC06G119220 vs. ExPASy TrEMBL
Match: A0A6J1HW20 (Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC111467179 PE=3 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 2.0e-123
Identity = 248/354 (70.06%), Postives = 282/354 (79.66%), Query Frame = 0


Query: 1   METQQQVHVDIAHLMALNPHHNLISPPSSRLVSAPSNNLFCRARLHQLEELVNECIQKGT 60
           ME QQ   +D+ +LMA NPHH   S  SSR                  E+LV+EC+QKG 
Sbjct: 3   MENQQPFQIDLGNLMAFNPHHKFPSLSSSR------------------EDLVSECLQKGA 62

Query: 61  ELVQAIANELFFLPSTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFL 120
           EL Q IAN+LF LPSTE +DG LV LPPP TRLPREK LPKPKPPTKWELFAKK+G    
Sbjct: 63  ELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG---- 122

Query: 121 FWFHLFLCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAE 180
                    IK  KK K V+D  T +WKR +GYDRANDE+NIPI+++KMTDEPGVDPFA 
Sbjct: 123 ---------IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAA 182

Query: 181 RRAKKRQRIEKQEKNRLQNLKQAAKMGALPSHVQLAATALPITGTQAATKKITKDELGNV 240
           RRA K+ R+EKQE+N+LQNLKQAAK+GALPSHVQLAATALPITGTQAA KKITKDELGNV
Sbjct: 183 RRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAPKKITKDELGNV 242

Query: 241 AGIAATATATGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGIGSQEKEQTEKVLNRLISK 300
           AG+AAT+TA+GGKFDKKL GEKP KH+GKYRKFLPVVEGTGIGSQE+EQTEKVLNRLISK
Sbjct: 243 AGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISK 302

Query: 301 NSHEILNINKAVNVCNVKREKKRTHERRKPSSSTSSKLKPNKKLQKKSLKKGKA 355
           NSHEILNINKAVN+ NVK+EKK+ ++R K SS +S+KLKPNKKLQKK LKKG +
Sbjct: 303 NSHEILNINKAVNMYNVKKEKKQRNQRGKSSSMSSNKLKPNKKLQKKPLKKGSS 325

[Close]

BLAST of CmUC06G119220 vs. ExPASy TrEMBL
Match: A0A6J1F066 (Ribosome biogenesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC111440969 PE=3 SV=1)

HSP 1 Score: 451.8 bits (1161), Expect = 2.6e-123
Identity = 248/354 (70.06%), Postives = 282/354 (79.66%), Query Frame = 0


Query: 1   METQQQVHVDIAHLMALNPHHNLISPPSSRLVSAPSNNLFCRARLHQLEELVNECIQKGT 60
           ME QQ   +D+ +LMA NPHH   S  SSR                  E+LV+EC+QKG 
Sbjct: 3   MENQQPFQIDLGNLMAFNPHHQYPSLSSSR------------------EDLVSECLQKGA 62

Query: 61  ELVQAIANELFFLPSTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFL 120
           EL Q IAN+LF LPSTE +DG LV LPPP TRLPREK LPKPKPPTKWELFAKK+G    
Sbjct: 63  ELAQFIANDLFNLPSTEDRDGPLVRLPPPSTRLPREKPLPKPKPPTKWELFAKKRG---- 122

Query: 121 FWFHLFLCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAE 180
                    IK  KK K V+D  T +WKR +GYDRANDE+NIPI+++KMTDEPGVDPFA 
Sbjct: 123 ---------IKNRKKDKIVYDDQTGSWKRRHGYDRANDEENIPIIEAKMTDEPGVDPFAA 182

Query: 181 RRAKKRQRIEKQEKNRLQNLKQAAKMGALPSHVQLAATALPITGTQAATKKITKDELGNV 240
           RRA K+ R+EKQE+N+LQNLKQAAK+GALPSHVQLAATALPITGTQAA KKITKDELGNV
Sbjct: 183 RRANKKNRVEKQERNQLQNLKQAAKVGALPSHVQLAATALPITGTQAAPKKITKDELGNV 242

Query: 241 AGIAATATATGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGIGSQEKEQTEKVLNRLISK 300
           AG+AAT+TA+GGKFDKKL GEKP KH+GKYRKFLPVVEGTGIGSQE+EQTEKVLNRLISK
Sbjct: 243 AGMAATSTASGGKFDKKLAGEKPAKHQGKYRKFLPVVEGTGIGSQEREQTEKVLNRLISK 302

Query: 301 NSHEILNINKAVNVCNVKREKKRTHERRKPSSSTSSKLKPNKKLQKKSLKKGKA 355
           NSHEILNINKAVN+ NVK+EKK+ ++R K SS +S+KLKPNKKLQKK LKKG +
Sbjct: 303 NSHEILNINKAVNMYNVKKEKKQRNQRGKSSSMSSNKLKPNKKLQKKPLKKGSS 325

[Close]

BLAST of CmUC06G119220 vs. TAIR 10
Match: AT2G37990.1 (ribosome biogenesis regulatory protein (RRS1) family protein )

HSP 1 Score: 353.2 bits (905), Expect = 2.4e-97
Identity = 198/353 (56.09%), Postives = 250/353 (70.82%), Query Frame = 0


Query: 1   METQQQVHVDIAHLMALNPHHNLISPPSSRLVSAPSNNLFCRARLHQLEELVNECIQKGT 60
           MET+Q   VD+ +L+A NP+H   S PSSR                   ELV E + +GT
Sbjct: 5   METEQIYQVDVGNLLAFNPNHRFPSAPSSR------------------GELVKEILTEGT 64

Query: 61  ELVQAIANELFFLPSTEAKDGLLVELPPPKTRLPREKHLPKPKPPTKWELFAKKKGRPFL 120
           +LVQ IAN+LF  PSTE  DG +V+LPPP T+LPREKH+P+PKPPTKWE FA KKG    
Sbjct: 65  KLVQEIANKLFNFPSTETNDGPIVQLPPPTTKLPREKHIPRPKPPTKWEEFALKKG---- 124

Query: 121 FWFHLFLCCIKIIKKTKHVFDKNTHTWKRCYGYDRANDEKNIPILKSKMTDEPGVDPFAE 180
                    I+  KK K V+D+ T+ +KR +GYDR ND+ ++PI+++K +DEPGVDPFA+
Sbjct: 125 ---------IQKRKKEKVVWDEQTNQFKRRHGYDRVNDDNDVPIIEAKESDEPGVDPFAK 184

Query: 181 RRAKKRQRIEKQEKNRLQNLKQAAKMGALPSHVQLAATALPITGTQAATKKITKDELGNV 240
           R   K++R+ KQEKNRLQNLK A K GALPSHVQLAAT+LPI+GT+A  KKI KDELG+V
Sbjct: 185 RLDDKKKRVGKQEKNRLQNLKAAEKAGALPSHVQLAATSLPISGTKAQPKKIGKDELGDV 244

Query: 241 AGIAATATATGGKFDKKLPGEKPPKHEGKYRKFLPVVEGTGIGSQEKEQTEKVLNRLISK 300
           AG+AAT+TA+GGKFDKKLPGEKPPK +GK+ K+LPVV G G  + EKEQT  VL+++ SK
Sbjct: 245 AGLAATSTASGGKFDKKLPGEKPPKKQGKHHKYLPVVSGRGDVNAEKEQTNNVLSKIFSK 304

Query: 301 NSHEILNINKAVNVCNVKREKKRTHERRKPSSSTSSKLKPNKKLQKKSLKKGK 354
           +SHEILN+ KA+N+ NVK+EKK+        S  S KLKP K + KK   K K
Sbjct: 305 HSHEILNVGKAINMYNVKKEKKK--------SGRSDKLKPKKDITKKPANKAK 318

The following BLAST results are available for this feature:

BLAST of CmUC06G119220 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961058.1	3.6e-135	75.14	ribosome biogenesis regulatory protein homolog [Cucurbita moschata]	[more]
XP_023515967.1	1.4e-134	74.58	ribosome biogenesis regulatory protein homolog isoform X1 [Cucurbita pepo subsp....	[more]
XP_022144805.1	8.8e-134	73.52	ribosome biogenesis regulatory protein homolog [Momordica charantia]	[more]
KAG6589856.1	1.5e-133	74.58	Ribosome biogenesis regulatory protein-like protein, partial [Cucurbita argyrosp...	[more]
XP_022987784.1	3.3e-133	74.01	ribosome biogenesis regulatory protein homolog [Cucurbita maxima]	[more]

BLAST of CmUC06G119220 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SH88	3.4e-96	56.09	Ribosome biogenesis regulatory protein homolog OS=Arabidopsis thaliana OX=3702 G...	[more]
Q15050	8.0e-29	35.40	Ribosome biogenesis regulatory protein homolog OS=Homo sapiens OX=9606 GN=RRS1 P...	[more]
Q9CYH6	1.0e-28	34.67	Ribosome biogenesis regulatory protein homolog OS=Mus musculus OX=10090 GN=Rrs1 ...	[more]
A1A5P2	1.4e-28	34.67	Ribosome biogenesis regulatory protein homolog OS=Rattus norvegicus OX=10116 GN=...	[more]
Q2KIH4	2.3e-28	34.67	Ribosome biogenesis regulatory protein homolog OS=Bos taurus OX=9913 GN=RRS1 PE=...	[more]

BLAST of CmUC06G119220 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAS5	1.7e-135	75.14	Ribosome biogenesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC11146...	[more]
A0A6J1CSP0	4.3e-134	73.52	Ribosome biogenesis regulatory protein OS=Momordica charantia OX=3673 GN=LOC1110...	[more]
A0A6J1JJT9	1.6e-133	74.01	Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC1114852...	[more]
A0A6J1HW20	2.0e-123	70.06	Ribosome biogenesis regulatory protein OS=Cucurbita maxima OX=3661 GN=LOC1114671...	[more]
A0A6J1F066	2.6e-123	70.06	Ribosome biogenesis regulatory protein OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]

BLAST of CmUC06G119220 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37990.1	2.4e-97	56.09	ribosome biogenesis regulatory protein (RRS1) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007023	Ribosomal biogenesis regulatory protein	PFAM	PF04939	RRS1	coord: 49..200 e-value: 8.1E-39 score: 133.1
IPR007023	Ribosomal biogenesis regulatory protein	PANTHER	PTHR17602	RIBOSOME BIOGENESIS REGULATORY PROTEIN	coord: 7..350
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 340..355
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 316..355
None	No IPR available	PANTHER	PTHR17602:SF6	RIBOSOME BIOGENESIS REGULATORY PROTEIN	coord: 7..350

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC06G119220.1	CmUC06G119220.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000447	endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
biological_process	GO:0042273	ribosomal large subunit biogenesis
biological_process	GO:0000055	ribosomal large subunit export from nucleus
biological_process	GO:0042254	ribosome biogenesis
cellular_component	GO:0005730	nucleolus
cellular_component	GO:0030687	preribosome, large subunit precursor
cellular_component	GO:0005634	nucleus