CmUC06G118810 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGACAATGATCCTCTATCGTCGCTTGGTAAGAGAAAAGGTGTATGTGCATATGCTTAATTTAATAGATTCAATTGTATGCAAGCTTGTACATGTTAAGGAATAAGCTTGTTATTTTAGTGCATTCAAATTATCTAGACATGAGTTTTCAAAGTTATAGTTAATGAATTGATTAGTTGGTTATGACAAGTAAACTGAAAAAATTAATTTTTAGTGTAGTAACCTGAAAATATGCCTACGTGAAGGAGAGATGCTCGTGGCCATGGACATGGTAGAAGAGGTCGAGGGGGTTCATGAGGCAGGGGACCCGCCCCTAGTCCTCTAGCAAATTTTGAAGAGAAAGTCCCAATGGGATTGCCACAGGGACCCACAACAATGACTTTATTGTTGGAGACCCTCCAATCTCTCGTTTAGATAGTTGTCACCGGTCAGGACAGAGATACTAGAAGTATTTCTATAGAGACCAAGTATCTACGGGATTTCAAGAAGTGGGATCCCCAAGATGGGTCGTCGGGTGACCCAATCATTGTAGAATTGTGGCTGTTATTTGTCGAAGCCATTTTTCAACGGATGACCTGTCTTGAAGAGCATTGGTGGGAGTTTGCGGAGAGATCTATCGACGTGAGTAATGGACTGGTTACTTGGACTCAGTTTAGGGAGGTGTTTTTCAGAAAGTACTTCCGTGCCACCATTCGTTAA ATGGCTGACAATGATCCTCTATCGTCGCTTGGAGAGATGCTCGTGGCCATGGACATGGTAGAAGAGGTCGAGGGGGTTCATGAGGCAGGGGACCCGCCCCTAATAGTTGTCACCGGTCAGGACAGAGATACTAGAAGTATTTCTATAGAGACCAAGTATCTACGGGATTTCAAGAAGTGGGATCCCCAAGATGGGTCGTCGGGTGACCCAATCATTGTAGAATTGTGGCTGTTATTTGTCGAAGCCATTTTTCAACGGATGACCTGTCTTGAAGAGCATTGGTGGGAGTTTGCGGAGAGATCTATCGACGTGAGTAATGGACTGGTTACTTGGACTCAGTTTAGGGAGGTGTTTTTCAGAAAGTACTTCCGTGCCACCATTCGTTAA ATGGCTGACAATGATCCTCTATCGTCGCTTGGAGAGATGCTCGTGGCCATGGACATGGTAGAAGAGGTCGAGGGGGTTCATGAGGCAGGGGACCCGCCCCTAATAGTTGTCACCGGTCAGGACAGAGATACTAGAAGTATTTCTATAGAGACCAAGTATCTACGGGATTTCAAGAAGTGGGATCCCCAAGATGGGTCGTCGGGTGACCCAATCATTGTAGAATTGTGGCTGTTATTTGTCGAAGCCATTTTTCAACGGATGACCTGTCTTGAAGAGCATTGGTGGGAGTTTGCGGAGAGATCTATCGACGTGAGTAATGGACTGGTTACTTGGACTCAGTTTAGGGAGGTGTTTTTCAGAAAGTACTTCCGTGCCACCATTCGTTAA MADNDPLSSLGEMLVAMDMVEEVEGVHEAGDPPLIVVTGQDRDTRSISIETKYLRDFKKWDPQDGSSGDPIIVELWLLFVEAIFQRMTCLEEHWWEFAERSIDVSNGLVTWTQFREVFFRKYFRATIR Homology
BLAST of CmUC06G118810 vs. NCBI nr
Match: XP_022156662.1 (uncharacterized protein LOC111023512 [Momordica charantia]) HSP 1 Score: 101.3 bits (251), Expect = 6.4e-18 Identity = 51/97 (52.58%), Postives = 61/97 (62.89%), Query Frame = 0
BLAST of CmUC06G118810 vs. NCBI nr
Match: XP_038875077.1 (uncharacterized protein LOC120067606 [Benincasa hispida]) HSP 1 Score: 100.5 bits (249), Expect = 1.1e-17 Identity = 49/113 (43.36%), Postives = 65/113 (57.52%), Query Frame = 0
BLAST of CmUC06G118810 vs. NCBI nr
Match: XP_038883046.1 (uncharacterized protein LOC120074107 [Benincasa hispida] >XP_038883047.1 uncharacterized protein LOC120074107 [Benincasa hispida] >XP_038883048.1 uncharacterized protein LOC120074107 [Benincasa hispida] >XP_038883049.1 uncharacterized protein LOC120074107 [Benincasa hispida] >XP_038883050.1 uncharacterized protein LOC120074107 [Benincasa hispida] >XP_038883051.1 uncharacterized protein LOC120074107 [Benincasa hispida] >XP_038883052.1 uncharacterized protein LOC120074107 [Benincasa hispida] >XP_038883053.1 uncharacterized protein LOC120074107 [Benincasa hispida] >XP_038883054.1 uncharacterized protein LOC120074107 [Benincasa hispida]) HSP 1 Score: 94.0 bits (232), Expect = 1.0e-15 Identity = 52/136 (38.24%), Postives = 70/136 (51.47%), Query Frame = 0
BLAST of CmUC06G118810 vs. NCBI nr
Match: XP_038889305.1 (uncharacterized protein LOC120079215 [Benincasa hispida]) HSP 1 Score: 92.8 bits (229), Expect = 2.3e-15 Identity = 47/106 (44.34%), Postives = 60/106 (56.60%), Query Frame = 0
BLAST of CmUC06G118810 vs. NCBI nr
Match: XP_038887018.1 (uncharacterized protein LOC120077183 [Benincasa hispida]) HSP 1 Score: 89.7 bits (221), Expect = 1.9e-14 Identity = 44/101 (43.56%), Postives = 57/101 (56.44%), Query Frame = 0
BLAST of CmUC06G118810 vs. ExPASy TrEMBL
Match: A0A6J1DSJ6 (uncharacterized protein LOC111023512 OS=Momordica charantia OX=3673 GN=LOC111023512 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 3.1e-18 Identity = 51/97 (52.58%), Postives = 61/97 (62.89%), Query Frame = 0
BLAST of CmUC06G118810 vs. ExPASy TrEMBL
Match: A0A5D3BU69 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00540 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.1e-12 Identity = 41/99 (41.41%), Postives = 57/99 (57.58%), Query Frame = 0
BLAST of CmUC06G118810 vs. ExPASy TrEMBL
Match: A0A5A7UIF4 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold102G00530 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.9e-12 Identity = 40/99 (40.40%), Postives = 57/99 (57.58%), Query Frame = 0
BLAST of CmUC06G118810 vs. ExPASy TrEMBL
Match: A0A5A7TYE6 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold230G001070 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 3.3e-12 Identity = 40/99 (40.40%), Postives = 56/99 (56.57%), Query Frame = 0
BLAST of CmUC06G118810 vs. ExPASy TrEMBL
Match: A0A5A7TTY2 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G00910 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 3.3e-12 Identity = 49/132 (37.12%), Postives = 70/132 (53.03%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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