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CmUC06G116730 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATCCCACGGCAAAATGAGCATCAGCATCCCTTCCTCCGCCAAAAGCGCCGGCGAGGGGGACGGCGTGGCGGCGCACTCCTGTTCATCGAAAGGCCAATGCCTCTGCTCACCCACGACTCATCCCGGTTCCTTCCGGTGCCGGCTTCACCGTTCGAATTCGTTGCCCTGGAGCAGGCAGTCCAAGTCCGCCGCCGCATCGGCCGACGCCTCTCACACCTCAGATCTCTCTCCAAAGTCAGTTGAATCTGCTTGA ATGGCATCCCACGGCAAAATGAGCATCAGCATCCCTTCCTCCGCCAAAAGCGCCGGCGAGGGGGACGGCGTGGCGGCGCACTCCTGTTCATCGAAAGGCCAATGCCTCTGCTCACCCACGACTCATCCCGGTTCCTTCCGGTGCCGGCTTCACCGTTCGAATTCGTTGCCCTGGAGCAGGCAGTCCAAGTCCGCCGCCGCATCGGCCGACGCCTCTCACACCTCAGATCTCTCTCCAAAGTCAGTTGAATCTGCTTGA ATGGCATCCCACGGCAAAATGAGCATCAGCATCCCTTCCTCCGCCAAAAGCGCCGGCGAGGGGGACGGCGTGGCGGCGCACTCCTGTTCATCGAAAGGCCAATGCCTCTGCTCACCCACGACTCATCCCGGTTCCTTCCGGTGCCGGCTTCACCGTTCGAATTCGTTGCCCTGGAGCAGGCAGTCCAAGTCCGCCGCCGCATCGGCCGACGCCTCTCACACCTCAGATCTCTCTCCAAAGTCAGTTGAATCTGCTTGA MASHGKMSISIPSSAKSAGEGDGVAAHSCSSKGQCLCSPTTHPGSFRCRLHRSNSLPWSRQSKSAAASADASHTSDLSPKSVESA Homology
BLAST of CmUC06G116730 vs. NCBI nr
Match: KAA0046595.1 (hypothetical protein E6C27_scaffold114G001360 [Cucumis melo var. makuwa] >TYK00101.1 hypothetical protein E5676_scaffold596G00570 [Cucumis melo var. makuwa]) HSP 1 Score: 145.2 bits (365), Expect = 2.6e-31 Identity = 76/85 (89.41%), Postives = 79/85 (92.94%), Query Frame = 0
BLAST of CmUC06G116730 vs. NCBI nr
Match: KAG6589904.1 (hypothetical protein SDJN03_15327, partial [Cucurbita argyrosperma subsp. sororia] >KAG7023574.1 hypothetical protein SDJN02_14600, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 141.4 bits (355), Expect = 3.7e-30 Identity = 72/85 (84.71%), Postives = 81/85 (95.29%), Query Frame = 0
BLAST of CmUC06G116730 vs. NCBI nr
Match: KAE8653119.1 (hypothetical protein Csa_020123 [Cucumis sativus]) HSP 1 Score: 138.3 bits (347), Expect = 3.1e-29 Identity = 74/82 (90.24%), Postives = 77/82 (93.90%), Query Frame = 0
BLAST of CmUC06G116730 vs. NCBI nr
Match: KAF3961111.1 (hypothetical protein CMV_014232 [Castanea mollissima]) HSP 1 Score: 77.4 bits (189), Expect = 6.6e-11 Identity = 44/84 (52.38%), Postives = 57/84 (67.86%), Query Frame = 0
BLAST of CmUC06G116730 vs. NCBI nr
Match: OUZ99929.1 (hypothetical protein BVC80_9069g38 [Macleaya cordata]) HSP 1 Score: 76.3 bits (186), Expect = 1.5e-10 Identity = 48/86 (55.81%), Postives = 60/86 (69.77%), Query Frame = 0
BLAST of CmUC06G116730 vs. ExPASy TrEMBL
Match: A0A5D3BJV5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold596G00570 PE=4 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 1.2e-31 Identity = 76/85 (89.41%), Postives = 79/85 (92.94%), Query Frame = 0
BLAST of CmUC06G116730 vs. ExPASy TrEMBL
Match: A0A0A0LWJ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G369490 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 2.3e-30 Identity = 76/87 (87.36%), Postives = 79/87 (90.80%), Query Frame = 0
BLAST of CmUC06G116730 vs. ExPASy TrEMBL
Match: A0A200PNZ0 (Uncharacterized protein OS=Macleaya cordata OX=56857 GN=BVC80_9069g38 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 7.1e-11 Identity = 48/86 (55.81%), Postives = 60/86 (69.77%), Query Frame = 0
BLAST of CmUC06G116730 vs. ExPASy TrEMBL
Match: A0A5N6QHE2 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_003263 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.2e-10 Identity = 43/84 (51.19%), Postives = 57/84 (67.86%), Query Frame = 0
BLAST of CmUC06G116730 vs. ExPASy TrEMBL
Match: A0A6N2KNM0 (Uncharacterized protein OS=Salix viminalis OX=40686 GN=SVIM_LOCUS113710 PE=4 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 4.6e-10 Identity = 50/85 (58.82%), Postives = 58/85 (68.24%), Query Frame = 0
BLAST of CmUC06G116730 vs. TAIR 10
Match: AT1G67910.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1); Has 167 Blast hits to 167 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 50.4 bits (119), Expect = 8.0e-07 Identity = 35/82 (42.68%), Postives = 46/82 (56.10%), Query Frame = 0
BLAST of CmUC06G116730 vs. TAIR 10
Match: AT1G67910.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24577.1). ) HSP 1 Score: 50.4 bits (119), Expect = 8.0e-07 Identity = 35/82 (42.68%), Postives = 46/82 (56.10%), Query Frame = 0
BLAST of CmUC06G116730 vs. TAIR 10
Match: AT3G13227.1 (serine-rich protein-related ) HSP 1 Score: 45.8 bits (107), Expect = 2.0e-05 Identity = 24/46 (52.17%), Postives = 28/46 (60.87%), Query Frame = 0
BLAST of CmUC06G116730 vs. TAIR 10
Match: AT1G24577.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67910.2); Has 115 Blast hits to 115 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 115; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 44.7 bits (104), Expect = 4.4e-05 Identity = 24/56 (42.86%), Postives = 33/56 (58.93%), Query Frame = 0
BLAST of CmUC06G116730 vs. TAIR 10
Match: AT5G55980.1 (serine-rich protein-related ) HSP 1 Score: 44.3 bits (103), Expect = 5.7e-05 Identity = 19/27 (70.37%), Postives = 22/27 (81.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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