CmUC06G116510 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC06G116510
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	30S ribosomal protein S4, chloroplastic
Location	CmU531Chr06: 11308351 .. 11309045 (-)
RNA-Seq Expression	CmUC06G116510
Synteny	CmUC06G116510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCATGTAACATTTTTGTTATGTGAGCTCGCTTAGCTCAGAGGTTAGAGAATAGCATTACAAACGCGATTTTAAAATTATGTAAAAATCAAATAAATAAAGAAACAACTTCTTACCCTTTTTTCAAAGGTCACTGATCTATCATGTCATAGGAACTTTCTTTTATGACTAAAGGAGAGGTTCTATTTCTGTAGAACAAATCAAGAAAGGAACTCTTACTTTTGTATATCATTTACATATACAATAGGATCCGGATATTGATCCAAGTCATCTAATTATTCTTTGTTTTGTAGTACAATACTTCACTAGATTTCTCTTCATTTATCATATTTACCATTTAGTTTAGTTTTGATTTAGGTTTATGAAATTTAAATAAAATAAGGAGTCGTTATGTGGTGTTACAGAGGGCCTCGTTTAAAAAAATACATTGTCTGGGGGGTTTACCGGGACTAACTAGTAAAAGGCCGAAAACCGGAAATGATCTTAAAAACCAATCGTGTTCTGGTAAAAAATCTCAATATCGTATTCGTTTAGAAGAAAAACAAAAATTATGTTTTCATTATGGTCTTACGGAACGACAATTACTTAAATACGTTTGTATCACCGGAAAAGCCAAAGGATCAATAGGTCAAGTTTTACTACGATTACTTGAAATACGTTTGGATAGCATCCTTTTCGATTGTATATGGCTTTGA

mRNA sequence

ATGCATAGGGCCTCGTTTAAAAAAATACATTGTCTGGGGGGTTTACCGGGACTAACTAGTAAAAGGCCGAAAACCGGAAATGATCTTAAAAACCAATCGTGTTCTGGTAAAAAATCTCAATATCGTATTCGTTTAGAAGAAAAACAAAAATTATGTTTTCATTATGGTCTTACGGAACGACAATTACTTAAATACGTTTGTATCACCGGAAAAGCCAAAGGATCAATAGGTCAAGTTTTACTACGATTACTTGAAATACGTTTGGATAGCATCCTTTTCGATTGTATATGGCTTTGA

Coding sequence (CDS)

ATGCATAGGGCCTCGTTTAAAAAAATACATTGTCTGGGGGGTTTACCGGGACTAACTAGTAAAAGGCCGAAAACCGGAAATGATCTTAAAAACCAATCGTGTTCTGGTAAAAAATCTCAATATCGTATTCGTTTAGAAGAAAAACAAAAATTATGTTTTCATTATGGTCTTACGGAACGACAATTACTTAAATACGTTTGTATCACCGGAAAAGCCAAAGGATCAATAGGTCAAGTTTTACTACGATTACTTGAAATACGTTTGGATAGCATCCTTTTCGATTGTATATGGCTTTGA

Protein sequence

MHRASFKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKYVCITGKAKGSIGQVLLRLLEIRLDSILFDCIWL

Homology

[Close]

BLAST of CmUC06G116510 vs. NCBI nr
Match: YP_247601.1 (ribosomal protein S4 [Cucumis sativus] >Q4VZH3.1 RecName: Full=30S ribosomal protein S4, chloroplastic [Cucumis sativus] >CAJ00760.1 ribosomal protein S4 [Cucumis sativus])

HSP 1 Score: 149.1 bits (375), Expect = 2.1e-32
Identity = 78/91 (85.71%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 3  RASFKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQL 62
          R  FKKI  LG LPGLTSKRPKTGNDLKNQS SGKKSQYRIRLEEKQKL FHYGLTERQL
Sbjct: 6  RPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQL 65

Query: 63 LKYVCITGKAKGSIGQVLLRLLEIRLDSILF 94
          LKYV I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 66 LKYVRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of CmUC06G116510 vs. NCBI nr
Match: RZC45333.1 (hypothetical protein C5167_038300 [Papaver somniferum])

HSP 1 Score: 147.9 bits (372), Expect = 4.6e-32
Identity = 75/88 (85.23%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPK GNDL+NQSCSGKKSQYRIRLEEKQKL FHYG+TERQLLKY
Sbjct: 9  FKKIRRLGDLPGLTSKRPKAGNDLRNQSCSGKKSQYRIRLEEKQKLRFHYGMTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of CmUC06G116510 vs. NCBI nr
Match: YP_009317388.1 (ribosomal protein S4 [Coccinia grandis] >AOX48752.1 ribosomal protein S4 [Coccinia grandis] >AOX48837.1 ribosomal protein S4 [Coccinia grandis])

HSP 1 Score: 147.5 bits (371), Expect = 6.0e-32
Identity = 77/88 (87.50%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPKTGNDLKNQS SGKKSQYRIRLEEKQKL FHYGLTERQLLKY
Sbjct: 9  FKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of CmUC06G116510 vs. NCBI nr
Match: AHM88823.1 (ribosomal protein S4 [Lagenaria siceraria])

HSP 1 Score: 147.5 bits (371), Expect = 6.0e-32
Identity = 77/88 (87.50%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPKTGNDLKNQS SGKKSQYRIRLEEKQKL FHYGLTERQLLKY
Sbjct: 9  FKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of CmUC06G116510 vs. NCBI nr
Match: QJR52958.1 (ribosomal protein S4 [Herpetospermum pedunculosum])

HSP 1 Score: 147.5 bits (371), Expect = 6.0e-32
Identity = 77/88 (87.50%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPKTGNDLKNQS SGKKSQYRIRLEEKQKL FHYGLTERQLLKY
Sbjct: 9  FKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of CmUC06G116510 vs. ExPASy Swiss-Prot
Match: Q4VZH3 (30S ribosomal protein S4, chloroplastic OS=Cucumis sativus OX=3659 GN=rps4 PE=3 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 2.7e-35
Identity = 78/91 (85.71%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 3  RASFKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQL 62
          R  FKKI  LG LPGLTSKRPKTGNDLKNQS SGKKSQYRIRLEEKQKL FHYGLTERQL
Sbjct: 6  RPRFKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQL 65

Query: 63 LKYVCITGKAKGSIGQVLLRLLEIRLDSILF 94
          LKYV I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 66 LKYVRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of CmUC06G116510 vs. ExPASy Swiss-Prot
Match: A4QKA7 (30S ribosomal protein S4, chloroplastic OS=Barbarea verna OX=50458 GN=rps4 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.5e-33
Identity = 74/88 (84.09%), Postives = 79/88 (89.77%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPK G+DL+NQS SGKKSQYRIRLEEKQKL FHYGLTERQLLKY
Sbjct: 9  FKKIRRLGALPGLTSKRPKAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of CmUC06G116510 vs. ExPASy Swiss-Prot
Match: A4QLA8 (30S ribosomal protein S4, chloroplastic OS=Lepidium virginicum OX=59292 GN=rps4 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.5e-33
Identity = 74/88 (84.09%), Postives = 79/88 (89.77%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPK G+DL+NQS SGKKSQYRIRLEEKQKL FHYGLTERQLLKY
Sbjct: 9  FKKIRRLGALPGLTSKRPKAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of CmUC06G116510 vs. ExPASy Swiss-Prot
Match: A4QLT5 (30S ribosomal protein S4, chloroplastic OS=Nasturtium officinale OX=65948 GN=rps4 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 2.5e-33
Identity = 74/88 (84.09%), Postives = 79/88 (89.77%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPK G+DL+NQS SGKKSQYRIRLEEKQKL FHYGLTERQLLKY
Sbjct: 9  FKKIRRLGALPGLTSKRPKAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of CmUC06G116510 vs. ExPASy Swiss-Prot
Match: A4QJB7 (30S ribosomal protein S4, chloroplastic OS=Aethionema cordifolium OX=434059 GN=rps4 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 5.6e-33
Identity = 73/88 (82.95%), Postives = 79/88 (89.77%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRP+ G+DL+NQS SGKKSQYRIRLEEKQKL FHYGLTERQLLKY
Sbjct: 9  FKKIRRLGALPGLTSKRPRAGSDLRNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of CmUC06G116510 vs. ExPASy TrEMBL
Match: A0A4Y7I8R6 (Uncharacterized protein ycf72 OS=Papaver somniferum OX=3469 GN=C5167_038300 PE=3 SV=1)

HSP 1 Score: 147.9 bits (372), Expect = 2.2e-32
Identity = 75/88 (85.23%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPK GNDL+NQSCSGKKSQYRIRLEEKQKL FHYG+TERQLLKY
Sbjct: 9  FKKIRRLGDLPGLTSKRPKAGNDLRNQSCSGKKSQYRIRLEEKQKLRFHYGMTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of CmUC06G116510 vs. ExPASy TrEMBL
Match: A0A218KG36 (30S ribosomal protein S4, chloroplastic OS=Cucumis sativus var. hardwickii OX=319220 GN=rps4 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.9e-32
Identity = 77/88 (87.50%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPKTGNDLKNQS SGKKSQYRIRLEEKQKL FHYGLTERQLLKY
Sbjct: 9  FKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of CmUC06G116510 vs. ExPASy TrEMBL
Match: A0A1X9Q1U9 (30S ribosomal protein S4, chloroplastic OS=Cucumis sativus OX=3659 GN=rps4 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.9e-32
Identity = 77/88 (87.50%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPKTGNDLKNQS SGKKSQYRIRLEEKQKL FHYGLTERQLLKY
Sbjct: 9  FKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of CmUC06G116510 vs. ExPASy TrEMBL
Match: A0A249RZ87 (30S ribosomal protein S4, chloroplastic OS=Cucumis melo var. cantalupensis OX=3658 GN=rps4 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.9e-32
Identity = 77/88 (87.50%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPKTGNDLKNQS SGKKSQYRIRLEEKQKL FHYGLTERQLLKY
Sbjct: 9  FKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of CmUC06G116510 vs. ExPASy TrEMBL
Match: A0A1S4EU11 (30S ribosomal protein S4, chloroplastic OS=Cucumis melo OX=3656 GN=rps4 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 2.9e-32
Identity = 77/88 (87.50%), Postives = 80/88 (90.91%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPKTGNDLKNQS SGKKSQYRIRLEEKQKL FHYGLTERQLLKY
Sbjct: 9  FKKIRRLGALPGLTSKRPKTGNDLKNQSRSGKKSQYRIRLEEKQKLRFHYGLTERQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

[Close]

BLAST of CmUC06G116510 vs. TAIR 10
Match: ATCG00380.1 (chloroplast ribosomal protein S4 )

HSP 1 Score: 137.1 bits (344), Expect = 7.5e-33
Identity = 72/88 (81.82%), Postives = 77/88 (87.50%), Query Frame = 0


Query: 6  FKKIHCLGGLPGLTSKRPKTGNDLKNQSCSGKKSQYRIRLEEKQKLCFHYGLTERQLLKY 65
          FKKI  LG LPGLTSKRPK G+DL+NQS S KKSQYRIRLEEKQKL FHYGLTE QLLKY
Sbjct: 9  FKKIRRLGALPGLTSKRPKAGSDLRNQSRSVKKSQYRIRLEEKQKLRFHYGLTEHQLLKY 68

Query: 66 VCITGKAKGSIGQVLLRLLEIRLDSILF 94
          V I GKAKGS GQVLL+LLE+RLD+ILF
Sbjct: 69 VRIAGKAKGSTGQVLLQLLEMRLDNILF 96

The following BLAST results are available for this feature:

BLAST of CmUC06G116510 vs. NCBI nr


Match Name	E-value	Identity	Description
YP_247601.1	2.1e-32	85.71	ribosomal protein S4 [Cucumis sativus] >Q4VZH3.1 RecName: Full=30S ribosomal pro...	[more]
RZC45333.1	4.6e-32	85.23	hypothetical protein C5167_038300 [Papaver somniferum]	[more]
YP_009317388.1	6.0e-32	87.50	ribosomal protein S4 [Coccinia grandis] >AOX48752.1 ribosomal protein S4 [Coccin...	[more]
AHM88823.1	6.0e-32	87.50	ribosomal protein S4 [Lagenaria siceraria]	[more]
QJR52958.1	6.0e-32	87.50	ribosomal protein S4 [Herpetospermum pedunculosum]	[more]

BLAST of CmUC06G116510 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4VZH3	2.7e-35	85.71	30S ribosomal protein S4, chloroplastic OS=Cucumis sativus OX=3659 GN=rps4 PE=3 ...	[more]
A4QKA7	2.5e-33	84.09	30S ribosomal protein S4, chloroplastic OS=Barbarea verna OX=50458 GN=rps4 PE=3 ...	[more]
A4QLA8	2.5e-33	84.09	30S ribosomal protein S4, chloroplastic OS=Lepidium virginicum OX=59292 GN=rps4 ...	[more]
A4QLT5	2.5e-33	84.09	30S ribosomal protein S4, chloroplastic OS=Nasturtium officinale OX=65948 GN=rps...	[more]
A4QJB7	5.6e-33	82.95	30S ribosomal protein S4, chloroplastic OS=Aethionema cordifolium OX=434059 GN=r...	[more]

BLAST of CmUC06G116510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A4Y7I8R6	2.2e-32	85.23	Uncharacterized protein ycf72 OS=Papaver somniferum OX=3469 GN=C5167_038300 PE=3...	[more]
A0A218KG36	2.9e-32	87.50	30S ribosomal protein S4, chloroplastic OS=Cucumis sativus var. hardwickii OX=31...	[more]
A0A1X9Q1U9	2.9e-32	87.50	30S ribosomal protein S4, chloroplastic OS=Cucumis sativus OX=3659 GN=rps4 PE=3 ...	[more]
A0A249RZ87	2.9e-32	87.50	30S ribosomal protein S4, chloroplastic OS=Cucumis melo var. cantalupensis OX=36...	[more]
A0A1S4EU11	2.9e-32	87.50	30S ribosomal protein S4, chloroplastic OS=Cucumis melo OX=3656 GN=rps4 PE=3 SV=...	[more]

BLAST of CmUC06G116510 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00380.1	7.5e-33	81.82	chloroplast ribosomal protein S4	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001912	Ribosomal protein S4/S9, N-terminal	SMART	SM01390	Ribosomal_S4_2	coord: 19..85 e-value: 1.9E-6 score: 37.5
IPR001912	Ribosomal protein S4/S9, N-terminal	PFAM	PF00163	Ribosomal_S4	coord: 26..85 e-value: 2.8E-15 score: 57.0
None	No IPR available	GENE3D	1.10.1050.10	Ribosomal Protein S4 Delta 41; Chain A, domain 1	coord: 1..97 e-value: 7.8E-26 score: 92.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 13..33
None	No IPR available	PANTHER	PTHR11831:SF35	30S RIBOSOMAL PROTEIN S4, CHLOROPLASTIC	coord: 5..93
None	No IPR available	SUPERFAMILY	55174	Alpha-L RNA-binding motif	coord: 6..95
IPR022801	Ribosomal protein S4/S9	PANTHER	PTHR11831	30S 40S RIBOSOMAL PROTEIN	coord: 5..93

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC06G116510.1	CmUC06G116510.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0009507	chloroplast
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome