CmUC06G116450 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC06G116450
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	cytochrome P450 714C2-like
Location	CmU531Chr06: 10901369 .. 10901713 (+)
RNA-Seq Expression	CmUC06G116450
Synteny	CmUC06G116450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGCCATTCAACCAACTTCATGTTCTTCTACAAAGTATAACTCATGCATTGCCTTCTCCCAACTCGAATCTAAATATGAAATTTAAAGCTCCACTGTTGCAATCGCAATGGAACCAACAAACAGAGCTCCAAGCAGTTGGATTCAGATTGACAATGGTGGTGATGCTACCCTCTGTAATAGCCCTTATTCTCCTCTTCATTATTCTTCACCTGTTTGAATCGCTGTTCTTGAAGCTAGAAAGACTTAGATTGAAGGCCCATAAGCAAGGAATCAACAGTCCTTCGCCTTCTTTTCTCCTCGAAAACCAAGAACATCGGAGCCCTAAAATCACAGGAGCTTGA

mRNA sequence

ATGCAGCCATTCAACCAACTTCATGTTCTTCTACAAAGTATAACTCATGCATTGCCTTCTCCCAACTCGAATCTAAATATGAAATTTAAAGCTCCACTGTTGCAATCGCAATGGAACCAACAAACAGAGCTCCAAGCAGTTGGATTCAGATTGACAATGGTGGTGATGCTACCCTCTGTAATAGCCCTTATTCTCCTCTTCATTATTCTTCACCTGTTTGAATCGCTGTTCTTGAAGCTAGAAAGACTTAGATTGAAGGCCCATAAGCAAGGAATCAACAGTCCTTCGCCTTCTTTTCTCCTCGAAAACCAAGAACATCGGAGCCCTAAAATCACAGGAGCTTGA

Coding sequence (CDS)

ATGCAGCCATTCAACCAACTTCATGTTCTTCTACAAAGTATAACTCATGCATTGCCTTCTCCCAACTCGAATCTAAATATGAAATTTAAAGCTCCACTGTTGCAATCGCAATGGAACCAACAAACAGAGCTCCAAGCAGTTGGATTCAGATTGACAATGGTGGTGATGCTACCCTCTGTAATAGCCCTTATTCTCCTCTTCATTATTCTTCACCTGTTTGAATCGCTGTTCTTGAAGCTAGAAAGACTTAGATTGAAGGCCCATAAGCAAGGAATCAACAGTCCTTCGCCTTCTTTTCTCCTCGAAAACCAAGAACATCGGAGCCCTAAAATCACAGGAGCTTGA

Protein sequence

MQPFNQLHVLLQSITHALPSPNSNLNMKFKAPLLQSQWNQQTELQAVGFRLTMVVMLPSVIALILLFIILHLFESLFLKLERLRLKAHKQGINSPSPSFLLENQEHRSPKITGA

Homology

[Close]

BLAST of CmUC06G116450 vs. NCBI nr
Match: XP_004139011.2 (cytochrome P450 714C2 isoform X1 [Cucumis sativus])

HSP 1 Score: 61.6 bits (148), Expect = 5.0e-06
Identity = 43/71 (60.56%), Postives = 50/71 (70.42%), Query Frame = 0


Query: 34  LQSQW-NQQTELQAVGFRLTMVVMLPSVIALILLFIILHLFESLFLKLERLRLKAHKQGI 93
           L+ +W N+QTE QA   R  MVV+   VIA+I  FI LHLFESLFLK ERLR K  +QGI
Sbjct: 14  LKFKWKNRQTEHQAA--RAAMVVLY--VIAVICFFIFLHLFESLFLKPERLRSKLRRQGI 73

Query: 94  NSPSPSFLLEN 104
           + PSPSF L N
Sbjct: 74  DGPSPSFFLGN 80

[Close]

BLAST of CmUC06G116450 vs. NCBI nr
Match: XP_016902075.1 (PREDICTED: cytochrome P450 714C2-like [Cucumis melo] >KAA0033319.1 cytochrome P450 714C2-like [Cucumis melo var. makuwa] >TYK21587.1 cytochrome P450 714C2-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 56.6 bits (135), Expect = 1.6e-04
Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 0


Query: 55  VMLPSVIALILLFIILHLFESLFLKLERLRLKAHKQGINSPSPSFLLEN 104
           ++L SVIA+I  F+ LHLFE LFLK ERLR K  +QGI+ PSPSFLL N
Sbjct: 4   MILLSVIAVIFFFLFLHLFELLFLKPERLRSKLRRQGIDGPSPSFLLGN 52

[Close]

BLAST of CmUC06G116450 vs. ExPASy TrEMBL
Match: A0A0A0LKC2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G139860 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 2.4e-06
Identity = 43/71 (60.56%), Postives = 50/71 (70.42%), Query Frame = 0


Query: 34  LQSQW-NQQTELQAVGFRLTMVVMLPSVIALILLFIILHLFESLFLKLERLRLKAHKQGI 93
           L+ +W N+QTE QA   R  MVV+   VIA+I  FI LHLFESLFLK ERLR K  +QGI
Sbjct: 14  LKFKWKNRQTEHQAA--RAAMVVLY--VIAVICFFIFLHLFESLFLKPERLRSKLRRQGI 73

Query: 94  NSPSPSFLLEN 104
           + PSPSF L N
Sbjct: 74  DGPSPSFFLGN 80

[Close]

BLAST of CmUC06G116450 vs. ExPASy TrEMBL
Match: A0A5D3DD37 (Cytochrome P450 714C2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G00890 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 7.8e-05
Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 0


Query: 55  VMLPSVIALILLFIILHLFESLFLKLERLRLKAHKQGINSPSPSFLLEN 104
           ++L SVIA+I  F+ LHLFE LFLK ERLR K  +QGI+ PSPSFLL N
Sbjct: 4   MILLSVIAVIFFFLFLHLFELLFLKPERLRSKLRRQGIDGPSPSFLLGN 52

[Close]

BLAST of CmUC06G116450 vs. ExPASy TrEMBL
Match: A0A1S4E273 (cytochrome P450 714C2-like OS=Cucumis melo OX=3656 GN=LOC103496956 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 7.8e-05
Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 0


Query: 55  VMLPSVIALILLFIILHLFESLFLKLERLRLKAHKQGINSPSPSFLLEN 104
           ++L SVIA+I  F+ LHLFE LFLK ERLR K  +QGI+ PSPSFLL N
Sbjct: 4   MILLSVIAVIFFFLFLHLFELLFLKPERLRSKLRRQGIDGPSPSFLLGN 52

The following BLAST results are available for this feature:

BLAST of CmUC06G116450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139011.2	5.0e-06	60.56	cytochrome P450 714C2 isoform X1 [Cucumis sativus]	[more]
XP_016902075.1	1.6e-04	65.31	PREDICTED: cytochrome P450 714C2-like [Cucumis melo] >KAA0033319.1 cytochrome P4...	[more]

BLAST of CmUC06G116450 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC06G116450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LKC2	2.4e-06	60.56	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G139860 PE=3 SV=1	[more]
A0A5D3DD37	7.8e-05	65.31	Cytochrome P450 714C2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A1S4E273	7.8e-05	65.31	cytochrome P450 714C2-like OS=Cucumis melo OX=3656 GN=LOC103496956 PE=3 SV=1	[more]

BLAST of CmUC06G116450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC06G116450.1	CmUC06G116450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016491	oxidoreductase activity