CmUC06G116350 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC06G116350
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Prefoldin chaperone subunit family protein
Location	CmU531Chr06: 10632095 .. 10634411 (+)
RNA-Seq Expression	CmUC06G116350
Synteny	CmUC06G116350

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAATATATAAGGCCCCAACATGAATGCCCCACACAATGCGCCCTCTTCTCTTCACTCTTTCAACCATCGCCCCAATCCCCAAACCAAACAAACCAATCCATTCCCAAAATGGCCGCCGACGCTGGGCTTCACACCGCGGCTTCCCCGTCTATACCCATCGAAGAACACAAACTGGAAATTACAAAACAGATGAGACGCTATGAGGTCGCCATTGCAGAGCTCAATCATCTCTCCTCTTCCAGAGTAACCCCTTCCCCGCTCTTTCTCTGCTTCTTTTTCTTCTTTCTCTAATTTGAACTAGATTTAGAACGCTGTACCGGCATTCTGTTTGAAAATTTTGTTCCAATTCTGCCTATTTTCCTTTTTCTGCCGAATATTTTGCTCGGACCAACTTTTCTATCGTATACGCTCTTAACTAGGGTGCAGTCGAACTGAAATCTTCATTATTACATGTTAATCTAGGCTCTAAATCTTCCAATAATTGCTCAACTTTTTCTGGCTGAACTCATCTTTTGAAACACTAGACGAACTTCTGTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGCCCCTTTAATGGATATAAACTGCTTGATTTATTTACTCCTATTTTTTAGAAGAATGTTAGTTTGGTAGTGACTTTTGATTGCTCTATTTTTCATTTTATTGAGATCTAGTAAAGGATTATAATTTCTCAATTTTATGAAAATACATTTAAAAACATTCGTGTGGATGAATTGATATTGTTACAAGAACATGAACAGATATTGATATCAAATTCTTCCATTTCTGATAATATTAGTGGAAGCATTAATATGTGGATGAACAACACATAATATCACCTTTAGTAACTAGGTCAGTTTGTGATTATAATCATGGTTTGATTTAGTTGGATTGGAGTTGTAGTTTGGGGTCTCCTTTCTTTATGCCCTTGTATATTCTTTTATTTTGTTCAATGAAACCTTGATTTCGTACTTTAAGGGGGGGAAAAAGACATGAAGAAGATTAAAAGATGAACAGCCTCTCTCTGATACACATTCTTAATGTTGTTGTAAATTGCAGGCTGTCTTTCAGAAAAACGGAAACATATTTTTTCGCACAACTATTCAAAAAGCAACAACTTCGGAACAGAGTAAGAATATTGCTTTAACAAACTTAACTTATACATATACACCCCCATGTTTTATGTCTTCCCTCTCAATCCTATCCAATTTATATCCTCATTTTAGACATTTCCCAAAGAAGGTTTTGAATATCCATATGAGGAAGAAATTTCTTTTTTGAAATATATTGTGGAAGTGTGATTTCAGTATTGAATAAATATTGAGAAATGTTAGATATATAGCAAAATCTCAAAGGGGTTTAGATGAAACCTTTCAAAATCCAGGGACACAAAGTAGTAACTAGAAAAATGTTGCCTTTTATCTGAGAGTTCAAATCATTTTTGAGTTTCTTGACACGTGTATGATATTTTTTCTGTTTGACCTTGGTTTCTCCTTCGACATTTATGAAATTCAAGACTTAACTATTATTGTCAATATCTACAATTAACTACTTGATCCCATCTTAACCGTTTTGATTGGTTGGTTTCTCTTTTCAGAAAAACTTGATGCGGCTAGAGCAAAGCTGGAAAGACTGAATTCTTGATTCGTACTGTCAATGAGGAAATATTCTAAACGATTTTCTAAGTGCTTCAAAAAGTGTTTTTTGTAAGTACTTTAAAATTCATTTAAAAGTCATTGGTCTTGAATTTCTCGCTTTTTTATTTTACTCAAGAGTAAAGTCTTGATCTAGAGGTTCAAAATTCTGCTTACAAAATCTATTTGCTAAAACTTCTTTCCCTGATTATTTTGTCATTTCCTCAATGAAGGAAAGAATGTGAAAGGTGAATAGCATCTTGTTTTAATATAATTGATCATTCATTTTGCAGACAATGATGCTTCATCATGTAAGTTTGAGCTGATATGATACGAATTTTCAAATGATAGTTTGATATTTAGTGTAGGGTCCAGTGGGTTTGAACTGGCTGCTCAGTCTAGAAATCATACAAGGCTAAGCTCGTTTTATGCCTTAGCCTACACACTAATTTTTGTACATTTTGAAGTGCAAATAAATTCTCCGATGGCCAGCTAGATTGATGTTCAAATTCCGACTTTCAGGCTAGGTCGGGTTGGCCTTCTGATGACATTGAGGTAGGTACATTTGTTGTTTAATTTTGTAGGTACAAATGTAAATTTGAAATTTTAACAAATGGGCTTAAGGTGAATGGGTTCCATCCATGGTGAG

mRNA sequence

AAAAAAATATATAAGGCCCCAACATGAATGCCCCACACAATGCGCCCTCTTCTCTTCACTCTTTCAACCATCGCCCCAATCCCCAAACCAAACAAACCAATCCATTCCCAAAATGGCCGCCGACGCTGGGCTTCACACCGCGGCTTCCCCGTCTATACCCATCGAAGAACACAAACTGGAAATTACAAAACAGATGAGACGCTATGAGGTCGCCATTGCAGAGCTCAATCATCTCTCCTCTTCCAGAGCTGTCTTTCAGAAAAACGGAAACATATTTTTTCGCACAACTATTCAAAAAGCAACAACTTCGGAACAGAAAAAACTTGATGCGGCTAGAGCAAAGCTGGAAAGACTGAATTCTTGATTCGTACTGTCAATGAGGAAATATTCTAAACGATTTTCTAAGTGCTTCAAAAAGTGTTTTTTTGTAGGGTCCAGTGGGTTTGAACTGGCTGCTCAGTCTAGAAATCATACAAGGCTAAGCTCGTTTTATGCCTTAGCCTACACACTAATTTTTGTACATTTTGAAGTGCAAATAAATTCTCCGATGGCCAGCTAGATTGATGTTCAAATTCCGACTTTCAGGCTAGGTCGGGTTGGCCTTCTGATGACATTGAGGTAGGTACATTTGTTGTTTAATTTTGTAGGTACAAATGTAAATTTGAAATTTTAACAAATGGGCTTAAGGTGAATGGGTTCCATCCATGGTGAG

Coding sequence (CDS)

ATGGCCGCCGACGCTGGGCTTCACACCGCGGCTTCCCCGTCTATACCCATCGAAGAACACAAACTGGAAATTACAAAACAGATGAGACGCTATGAGGTCGCCATTGCAGAGCTCAATCATCTCTCCTCTTCCAGAGCTGTCTTTCAGAAAAACGGAAACATATTTTTTCGCACAACTATTCAAAAAGCAACAACTTCGGAACAGAAAAAACTTGATGCGGCTAGAGCAAAGCTGGAAAGACTGAATTCTTGA

Protein sequence

MAADAGLHTAASPSIPIEEHKLEITKQMRRYEVAIAELNHLSSSRAVFQKNGNIFFRTTIQKATTSEQKKLDAARAKLERLNS

Homology

[Close]

BLAST of CmUC06G116350 vs. NCBI nr
Match: XP_011649062.1 (uncharacterized protein LOC105434577 [Cucumis sativus] >KGN61409.1 hypothetical protein Csa_006282 [Cucumis sativus])

HSP 1 Score: 135.2 bits (339), Expect = 2.6e-28
Identity = 72/83 (86.75%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 1  MAADAGLHTAASPSIPIEEHKLEITKQMRRYEVAIAELNHLSSSRAVFQKNGNIFFRTTI 60
          MAAD GL TAASPSI +EE KLEITKQMR  EVAIAELNHLSS+RAVFQKNGN+FFRTT+
Sbjct: 1  MAADGGLSTAASPSITMEEQKLEITKQMRSLEVAIAELNHLSSTRAVFQKNGNLFFRTTV 60

Query: 61 QKATTSEQKKLDAARAKLERLNS 84
          QKATTSEQKKLDAARAKLE LNS
Sbjct: 61 QKATTSEQKKLDAARAKLESLNS 83

[Close]

BLAST of CmUC06G116350 vs. NCBI nr
Match: XP_038875459.1 (uncharacterized protein LOC120067907 [Benincasa hispida])

HSP 1 Score: 133.3 bits (334), Expect = 9.9e-28
Identity = 71/83 (85.54%), Postives = 75/83 (90.36%), Query Frame = 0


Query: 1  MAADAGLHTAASPSIPIEEHKLEITKQMRRYEVAIAELNHLSSSRAVFQKNGNIFFRTTI 60
          M A +G  TAASPSI IEE KLEITKQ+R YEVAIAELNHLSSSRA+FQKNGNIFFRTT+
Sbjct: 1  MDAGSGFSTAASPSITIEEQKLEITKQIRSYEVAIAELNHLSSSRAIFQKNGNIFFRTTV 60

Query: 61 QKATTSEQKKLDAARAKLERLNS 84
          QKATTSEQKKLDAA AKLERLNS
Sbjct: 61 QKATTSEQKKLDAATAKLERLNS 83

[Close]

BLAST of CmUC06G116350 vs. NCBI nr
Match: XP_008457178.1 (PREDICTED: uncharacterized protein LOC103496917 [Cucumis melo])

HSP 1 Score: 128.6 bits (322), Expect = 2.4e-26
Identity = 68/83 (81.93%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 1  MAADAGLHTAASPSIPIEEHKLEITKQMRRYEVAIAELNHLSSSRAVFQKNGNIFFRTTI 60
          MAAD G  TAA PSI  EE KLEITKQMR  EVAIAELNHLSS+RAV+QKNGN+FFRTT+
Sbjct: 1  MAADGGFSTAAFPSITKEEQKLEITKQMRSLEVAIAELNHLSSTRAVYQKNGNLFFRTTV 60

Query: 61 QKATTSEQKKLDAARAKLERLNS 84
          QKATTSEQKKLDAA+A+LERLNS
Sbjct: 61 QKATTSEQKKLDAAKARLERLNS 83

[Close]

BLAST of CmUC06G116350 vs. NCBI nr
Match: KAG7026105.1 (Mechanosensitive ion channel protein 10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 120.9 bits (302), Expect = 5.1e-24
Identity = 65/83 (78.31%), Postives = 73/83 (87.95%), Query Frame = 0


Query: 1   MAADAGLHTAAS-PSIPIEEHKLEITKQMRRYEVAIAELNHLSSSRAVFQKNGNIFFRTT 60
           MA   G  TAA+ PS  IEE KLEITK+MR +EV+IAELNHLSS+RAVFQKNGNIFFRTT
Sbjct: 623 MATGGGFGTAAAFPSTTIEEQKLEITKEMRSHEVSIAELNHLSSTRAVFQKNGNIFFRTT 682

Query: 61  IQKATTSEQKKLDAARAKLERLN 83
           +QKATTSEQKKLDAARAKL++LN
Sbjct: 683 VQKATTSEQKKLDAARAKLQKLN 705

[Close]

BLAST of CmUC06G116350 vs. NCBI nr
Match: XP_023514719.1 (uncharacterized protein LOC111778937 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 120.9 bits (302), Expect = 5.1e-24
Identity = 66/84 (78.57%), Postives = 73/84 (86.90%), Query Frame = 0


Query: 1  MAADAGLHTAAS-PSIPIEEHKLEITKQMRRYEVAIAELNHLSSSRAVFQKNGNIFFRTT 60
          MA   G  TAA  PS  IEE KLEITK+MR +EV+IAELNHLSS+RAVFQKNGNIFFRTT
Sbjct: 1  MATGGGFGTAAEFPSRTIEEQKLEITKEMRSHEVSIAELNHLSSTRAVFQKNGNIFFRTT 60

Query: 61 IQKATTSEQKKLDAARAKLERLNS 84
          +QKATTSEQKKLDAARAKL++LNS
Sbjct: 61 VQKATTSEQKKLDAARAKLQKLNS 84

[Close]

BLAST of CmUC06G116350 vs. ExPASy TrEMBL
Match: A0A0A0LK18 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G118320 PE=3 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.3e-28
Identity = 72/83 (86.75%), Postives = 76/83 (91.57%), Query Frame = 0


Query: 1  MAADAGLHTAASPSIPIEEHKLEITKQMRRYEVAIAELNHLSSSRAVFQKNGNIFFRTTI 60
          MAAD GL TAASPSI +EE KLEITKQMR  EVAIAELNHLSS+RAVFQKNGN+FFRTT+
Sbjct: 1  MAADGGLSTAASPSITMEEQKLEITKQMRSLEVAIAELNHLSSTRAVFQKNGNLFFRTTV 60

Query: 61 QKATTSEQKKLDAARAKLERLNS 84
          QKATTSEQKKLDAARAKLE LNS
Sbjct: 61 QKATTSEQKKLDAARAKLESLNS 83

[Close]

BLAST of CmUC06G116350 vs. ExPASy TrEMBL
Match: A0A1S3C672 (uncharacterized protein LOC103496917 OS=Cucumis melo OX=3656 GN=LOC103496917 PE=3 SV=1)

HSP 1 Score: 128.6 bits (322), Expect = 1.2e-26
Identity = 68/83 (81.93%), Postives = 74/83 (89.16%), Query Frame = 0


Query: 1  MAADAGLHTAASPSIPIEEHKLEITKQMRRYEVAIAELNHLSSSRAVFQKNGNIFFRTTI 60
          MAAD G  TAA PSI  EE KLEITKQMR  EVAIAELNHLSS+RAV+QKNGN+FFRTT+
Sbjct: 1  MAADGGFSTAAFPSITKEEQKLEITKQMRSLEVAIAELNHLSSTRAVYQKNGNLFFRTTV 60

Query: 61 QKATTSEQKKLDAARAKLERLNS 84
          QKATTSEQKKLDAA+A+LERLNS
Sbjct: 61 QKATTSEQKKLDAAKARLERLNS 83

[Close]

BLAST of CmUC06G116350 vs. ExPASy TrEMBL
Match: A0A6J1KIB7 (uncharacterized protein LOC111494702 OS=Cucurbita maxima OX=3661 GN=LOC111494702 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 9.3e-24
Identity = 65/84 (77.38%), Postives = 73/84 (86.90%), Query Frame = 0


Query: 1  MAADAGLHTAA-SPSIPIEEHKLEITKQMRRYEVAIAELNHLSSSRAVFQKNGNIFFRTT 60
          MA   G  TA+  PS  IEE KLEITK+MR +EV+IAELNHLSS+RAVFQKNGNIFFRTT
Sbjct: 1  MATGGGFGTASVFPSRTIEEQKLEITKEMRSHEVSIAELNHLSSTRAVFQKNGNIFFRTT 60

Query: 61 IQKATTSEQKKLDAARAKLERLNS 84
          +QKATTSEQKKLDAARAKL++LNS
Sbjct: 61 VQKATTSEQKKLDAARAKLQKLNS 84

[Close]

BLAST of CmUC06G116350 vs. ExPASy TrEMBL
Match: A0A6J1HJ49 (uncharacterized protein LOC111464527 OS=Cucurbita moschata OX=3662 GN=LOC111464527 PE=3 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.6e-23
Identity = 64/83 (77.11%), Postives = 72/83 (86.75%), Query Frame = 0


Query: 1   MAADAGLHTAAS-PSIPIEEHKLEITKQMRRYEVAIAELNHLSSSRAVFQKNGNIFFRTT 60
           M    G  TAA+ PS  IEE KLEITK+MR +EV+IAELNHLSS+RAVFQKNGNIFFRTT
Sbjct: 24  MPTGGGFGTAAAFPSRTIEEQKLEITKEMRSHEVSIAELNHLSSTRAVFQKNGNIFFRTT 83

Query: 61  IQKATTSEQKKLDAARAKLERLN 83
           +QKATTSEQKKLDAARAKL++LN
Sbjct: 84  VQKATTSEQKKLDAARAKLQKLN 106

[Close]

BLAST of CmUC06G116350 vs. ExPASy TrEMBL
Match: A0A6J1DN63 (uncharacterized protein LOC111022769 OS=Momordica charantia OX=3673 GN=LOC111022769 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.3e-22
Identity = 65/86 (75.58%), Postives = 69/86 (80.23%), Query Frame = 0


Query: 1  MAADAGLHT---AASPSIPIEEHKLEITKQMRRYEVAIAELNHLSSSRAVFQKNGNIFFR 60
          MA   G  T    ASPS  IEE KLEI K MR +EVAIAELNHLSS RAVFQKNGN+FFR
Sbjct: 1  MAGGGGFVTVAATASPSRTIEEQKLEIAKAMRSHEVAIAELNHLSSFRAVFQKNGNLFFR 60

Query: 61 TTIQKATTSEQKKLDAARAKLERLNS 84
          TT+QKATTSEQKKLD ARAKLE+LNS
Sbjct: 61 TTVQKATTSEQKKLDMARAKLEKLNS 86

[Close]

BLAST of CmUC06G116350 vs. TAIR 10
Match: AT1G49245.1 (Prefoldin chaperone subunit family protein )

HSP 1 Score: 64.3 bits (155), Expect = 5.2e-11
Identity = 29/65 (44.62%), Postives = 51/65 (78.46%), Query Frame = 0


Query: 19 EHKLEITKQMRRYEVAIAELNHLSSSRAVFQKNGNIFFRTTIQKATTSEQKKLDAARAKL 78
          + + E+ K+++R EV++ EL+ LSSSR+++QKNGN+FF T+ +KA  S QK+LD A++++
Sbjct: 8  DREFELEKEIKRQEVSLDELSSLSSSRSIYQKNGNLFFLTSAEKAKISAQKQLDYAKSEI 67

Query: 79 ERLNS 84
           ++ S
Sbjct: 68 NKIRS 72

The following BLAST results are available for this feature:

BLAST of CmUC06G116350 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649062.1	2.6e-28	86.75	uncharacterized protein LOC105434577 [Cucumis sativus] >KGN61409.1 hypothetical ...	[more]
XP_038875459.1	9.9e-28	85.54	uncharacterized protein LOC120067907 [Benincasa hispida]	[more]
XP_008457178.1	2.4e-26	81.93	PREDICTED: uncharacterized protein LOC103496917 [Cucumis melo]	[more]
KAG7026105.1	5.1e-24	78.31	Mechanosensitive ion channel protein 10, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_023514719.1	5.1e-24	78.57	uncharacterized protein LOC111778937 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CmUC06G116350 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC06G116350 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LK18	1.3e-28	86.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G118320 PE=3 SV=1	[more]
A0A1S3C672	1.2e-26	81.93	uncharacterized protein LOC103496917 OS=Cucumis melo OX=3656 GN=LOC103496917 PE=...	[more]
A0A6J1KIB7	9.3e-24	77.38	uncharacterized protein LOC111494702 OS=Cucurbita maxima OX=3661 GN=LOC111494702...	[more]
A0A6J1HJ49	1.6e-23	77.11	uncharacterized protein LOC111464527 OS=Cucurbita moschata OX=3662 GN=LOC1114645...	[more]
A0A6J1DN63	1.3e-22	75.58	uncharacterized protein LOC111022769 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]

BLAST of CmUC06G116350 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G49245.1	5.2e-11	44.62	Prefoldin chaperone subunit family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009053	Prefoldin	GENE3D	1.10.287.370		coord: 16..83 e-value: 8.4E-8 score: 33.9
IPR002777	Prefoldin beta-like	PFAM	PF01920	Prefoldin_2	coord: 18..82 e-value: 5.7E-7 score: 29.5
None	No IPR available	SUPERFAMILY	46579	Prefoldin	coord: 23..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC06G116350.1	CmUC06G116350.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006457	protein folding
cellular_component	GO:0016272	prefoldin complex
molecular_function	GO:0051082	unfolded protein binding