CmUC06G115880 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC06G115880
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	high mobility group B protein 15-like
Location	CmU531Chr06: 9592049 .. 9598571 (+)
RNA-Seq Expression	CmUC06G115880
Synteny	CmUC06G115880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGATCCTTTCAAAAACTATATTGGACATTAATTTACAAAAGAAAAAACCGTTTCGAGAAATTATGTAAAAGGAAAGAAAAAGAAAAAAGAAAAAGAAGAAGTCATAAAATCATAAAATTTGGAATGAACAACATTATTTTTAGTATGTACATTAATAAATAAAGTAAATACCAAAATAATATAAGTAAAGAAGAAATATCCGAAAATATTTGCTTATGAATACAATTAATAACAGTTTGAGGATGAAGAACGAACCCCCCGCCATAACGTATTCCTCATTTTCCTCCATAACTTTCGTATTTTGCGATTCCTAATTTACCCTTCTCCTTCATCCAATATTCTCGCTTACTTCTTGGTTTTCTCTCGCATCAATGTCCTCTTAATTGGGGTTAGTTCCTTCTAAACCTTTCTCTTTTCTAATCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCTTTTTGGGTCTTTTATGAATTTTCCCCCCTCTTATTGCCTTCTTCATACATCTCTCACTCTATCTTTAAAGTATGTACTTCATTCATGCTTTTTTATAATTTTTCTTTTTTTAAAACTGTTTATTCTGTCATATCATCATCTGGGTTGTCTGCATTTTGCATTTCCATATTCTTATTTCAATAATACACATTTGGAAGACGGATTTAGTAATGAAAATAATGGACACTAGTATTCGCATCACTATTCTGTTTGGTAATTCCATTAATTTCTACTTTCTTTCTGCTCTGATTTGTGATTTTCAATGTGGGGTTTCTTTATTTTAATGAATGTAGGGTGCTTGGGCATATACCCACCTTCGAACTCAAAGCCCATCAGCTCATTCATAATAGCATCTCTTTTGGATTTCCCAGTTCTTGTTTTTGTTTCTTGAATCCTTTTGTTTAATGGGGTTGTTTGAAAAATCTGCAAGTTATGAAATCTGATTTTGTGTCAGATAATGGGAAAATAGATAGGGAGAAAGAAGAAGAAGAAGAAGAAAAAGAACTTTTTCGCTTTGTCAACTTAGAGGAGACAATTGTTTAATACGCATTAGATATCTTTGGAATGTCAGGGAAAGGTCCATAGCTTTGTTACTAGGCCTGAAAACTTTCCCAGTGAGAGATTTATTGCAATGGCCTAAAAGGGGAGGAAACTTCCCCAGTAAGAGAGATTTATTGCAATGGCCTAAAAAGGGGAGGCTCTTCTCATCACCTTTTTTTTGTAGCCTCTGTAGGAAAAAGGGTCTGGCTTCTGGGTAGTTCTTTGGGTTCAGCCCCTTGGTTCTCTAAGAGGAATTCATGGCTGTGACAGCTTTGCTGTACCATTTGCTTTTTTGGTTCTTTGAATCTCTACCTTATTACTGGGAGTTATTTCATCTGTTCAGGTAGTTGTGGTGTTTCTTGTTATCTCAGTTCTGATTTCTGAACTTCCAATTTGCATGTTAGTGATTCTCAAGGGGGTGGGGTGGGGTTATTTATCTCGATGAAGTTTCTGTTGTTTTGTGCCATTTATGAACCTTTACATGTGCAGTGCAATTGATCCAGTCTTCTATTGCTGTTTTGTTTCTTTGAGATTTTATATAACACAGTTACAATGCTTGTATGCTATATAAAAGGAATTGTGGAAAGATTTTCTTGCTGACTGGTGGAGAAGAATCAAGGAAGAGGGCTTTCCGGTTTTCCAAGACAAATCTATTTATAAAGGTCTCTCTCTGCCTTTCTCTTTTGTTTTTTCTCCCCATTATGTTCTCTGTGAGCTGCCTTTTGTTTTTTCACAAGCCCCAGCTTAATATTGGTAAATTTCAACAAACCCACCACATTTCTAATTCTAAAGAAACTTGGTATTGTATTGTGTAATGGTTTAAGAATAATCTTTCAAGTATATCTCAGGGCATTCTCCAACCCAAAACATCAATACCACCACATTCTGTAGCTTCGATTGGCCAACAGATGCACCATCAAGTTAAATCTTCTTTTGATTCACTGGAAGCCTGAGTCGGTTCACATGCTCCTTCAACATTTGAATCTCCACAGCAATCATACTCAATACTTTCTTTCTTCAATGGAGCAATTGTTCTAGAGGAATCGAGCTCAAAGGCTTGAGAACAGATTCCACCTTTAATTGTCACTTGTGGAGCCTTTTGGATTGCTGATACATTGGCTACATCAACTTCTTGGATGTAAGGTACCACTTTAGCAAAGGTATAATGACATCGCCTTCAGCATTCTCGATAATTGCTCCTACTCTCATCTTTTTAGGGCTAGTCTGAATAGAAGCATTTGTATTCAAAGTGTATACATTGATAATTCTCCATCCATCTGGGATGTATCATTCTTGCATCTGTATATGTTGTTAGCCTCCGACATTCCTTTTTAAGATAGATAAGGGCAATATTCTGTTATACACTTGGGGTTTCTGCCCTTAAGAATGAGAACAATTACTGTCTAGTATAAAGCTTTTGGGGATCTCTTGTTCGTTGAGAACCTTTAGACAGCATGATTCACACATTTCCCCACAAAATGCCATAACCCTTGAAAAAACAAATCCAGCAACCCAACAGGGCCAGGGGGCTTTCGGGTATATGCATCCAGTTACAGGTCAATGGAACCTATCCTTGGTGTAGGTAGGTACTCGAGCCTCATTCATTTCATCACTGTCACATGGCTAGAGATGTCTTAGAAAGCAAGAAACTTAACCACTGCTATCTTACCCATTGCAAGAAACAGGAGTATTGAGTTAACACTCTCCATTTCAACCTCCTCCACCCGTCATCATTATGATTCAGAAAGCTCTCACGTTATTTTTGCACTTTCTTTAATCTTATAGAACCATCTTGTGTTTCTATCCCGCCACGACCAACCTTCATTGGACTAGACCTTGCTTGCAGAATTTTCTTCATTAAATTTGTGGAATTGTTCTTCTGCCTTTCTTACCTTCCTATTAGATTCAACTGGTCTGTGTTAGTAGTTTCCTCAATTTTCCCTTACATAGCTCCTTTTTCCCCTGGGGCTTTCTGACCTCTTAATACAGCATGGGACTTTCTTCGCCTTTCCTTTGGCTTTCTGCTCTGGTGTTTGTGGTGTCTCCTATTATCCTAGTTCTGAGCTTCCTATTTGGTTAATGATTATGAAAGGGGTGGGGGTATTTGTCTCTGTGGACTTATGTTGTTTTTAACCATTTATGACTACTCTTTGCTTGCAATTTACAATGCAGATGGTTCAGCCTTTGATTTCTGTTTTTATTTTTTTTTAAATTTGTATAACTCAGTGATGGATGTGCTTGAGCAGTTCGTTGGTTGATGATAGAAGAGGAAAGAACAGAGGCAGGCTGGGGTAGTAGGAAGGAGTTGACCATGGCATCGACTTCTTTTGCTGGCGGGAAGCAACTGCCAGCAATTGAAGTGTCTTCAAACTGTGTTCCATACCCACCACCGCAAACAACATATGATGATATCGTAGCCAATCCGAAGATCTTTATGACTTCCTTGGAAAAGCTCCACTCTATCATGGGAACCAAGTTCATGTATATTTCTTAAACATCTCCTCCTTTACCTGTGGAGTGGACATTGTCATTCATTTAATGGAAGTTGCTCAAATTTTGTTTAAATAGAGATAACAAGTCTTTGTAAATCAATAGTAGTAAAGCCTGATGCTACCTTGTATTCCTGGTCTTCACATGGAAGTAAAAGTTGATTTTGCTTTTTTGAAATTTTTTTATGTACTCATTATGTTTCCTCGTGGGAGCAACTATCTGTTCTCAGTTTTTGCAATTAGATATAGATTTTCTTTTTCACTTTTACCTCCCAAAAACGCAGGATCCCCATTATTGGTGGGAAAGAACTAGACCTGCATCGGCTTTTTGTGGAGGTTACTTCTCGTGGTGGCATTGAGAAGGTAAAATTGACTTGCTATGAATCTTGTGATCAATACTTTCATATCTGAAACTTAGTGATTAACCTTGGAGTTGGGACTTGTTCTTTATATCCTTAGATGACAAATATAAGGCGGGTATTTGATCTTATTTCCAACTTTTTCATCTACTTTCATGATTGTTAAATATTGCTGCAGTTGCAGATGATTATAAGGCTGAGGTTCTTTGTATTCTTTCATTTCACATCTTACTGAATGATGTCGATCTGATTGTGTTTTTCTGTTTCTTGGCCAGTTGAAATTTCTTTATTGAACAAAGGTTCTGGTATCTAAAAGCATGATAAATATTCTCACCCGATGAGTTATAGGCTTCTGGGTTGATTGTGTTATTAGAGGGTTGGTGAAATGCAAACGAGGACCTTGCCAAAACCTGTCAGGGCAGCGATTGCAGTTTCTTTGCTGCCCATCAAGGATTTAGTCTACGTCTACAATGCTGGAAGAATATGTTGTACTTTTTTTTTTCCAAACAGGATTGAATGACACATGTAGCTCCTTTTGTTATGATTTGGACTCATTTACAATGGTGTTGTGGCATGCTATTAAATTTGTTTGCTATGGTTTTTACTTCGATAATGTTCCTTACTTCTCCACATGGATAAAACTTAAAAGTTGAATCATTCTAATTGACATTTTAAAACATATTATTTGTTACAAATTCATATTATCCCACAGCATGATCATGTCACAATCCTGATTTTACAGGTTATAAGAGAGAGAAGATGGAAAGAAGTAACTTCAGTTTTCAATTTTCCTTCTACGGCCACCAATGCATCTTTTGTGCTGAGGAAGTACTATCTTTCATTGCTTCACCATTTTGAACAGATTTACTTCTTTAAAGCTGTGGGATGGACACCACTAATTTCTGGCAAGTATTAATAGAGTGCCTTTAATTCTTTCCTGAAGAACATGCCATATTCTGCTATTTATTTTCTAACATAACAATCTTTCAGATTCTTCTCCATGCCCAAGTGCAGCGACAATTCCTATGCAAGGGATGACCTCTATGTTGCCGCCATCAGATAATCAGGCAGTGTCCCAGCAACCACGGATTACTGAACTTCCAGCAGGTGTATTCTATGGTCCTTTGGAAATATACTCGGAATATAAGTTAGGGAGCAATATATTTGAGCGCTTCAATGCCTTCTTTACAAGTTCATGTCATATGGCATACAAATACTGCAATTTCTTTCTGTTCTTGCTTTGTATTTTATAGTCGATGACACTCAGTTTCTCACGTTGAATGCTAACTAGATAGTTCTTTTCACCCTACAGTTTCTCCGAGTTCGACATCACCGGCAGGAGGGTTTCCAGTGATTGGAGTCATTGACGGAAAATTTGATAGCGGATATCTTGTTACTGTTACTGTTGGAACGGAGAAGCTAAAAGGTGTGCTTTATCAGGCTCCTTCTGAGCAACCTTCTCAGCAGCAAGTTTTGCAGCCTGTTGGTGCTTTTGCCAAAGATGGTGCTACCTCCACCGCACCAAATGCTCATCGCCGTCGTCGTCGGAAGAAATCTGAGATTAAGAGAAGGGATCCTGCTCATCCAAAGCCAAACAGAAGCGGCTACAACTTCTTCTTTGCTGAGCAGCATGCCAGACTCAAACCATTATACCCAGGGAAGGACAGGGAGATAAGCAGAATGATTGGTGACCTTTGGAATAAACTTAAAGAGTCTGAAAGAACAGTAAGGATTGCATTACTCTTTATCTTTTATGCTTTAAGAATCGGTCACATCTTTGGTAGTAGCTGGTGTCGATTATTTTTCTTTACTTGCAGGTTTATCAGGAGAAAGCTATGAAAGATAAAGAAAGATACAGAATCGAGATGGAGGATTACAGAGAGAAGCTGAGGACAGGCCAAATCATCAGTGATGCAGTGCCCTTACAGCAGCGTCTTCCGGAACCAGACCTGAATATGGTCTATGCTGACAAAAATGAAGAAACCGAGGGCGGTGAGTCTCCTCAAACACCAGATAATGACACAAGCTATGTGGAAGGCGACTCCGGAGAGTATAAAACGGAAGAGAAGGAGGAGGAAGAAGAAGAAGATGAGGAGGAGGACTCGGAAGAAGATGCATCTCCACAAGGAATTGGTAATGTGGACGTTAACGTTTTTGTTGAGGAGGAACAGTGTGAGACGAGAACAGCCGAAGAGGATGTTAGAAAAGATAGTAGCATGGTCGGTGACGATAAAGAAGTTTACGCCGGGGATTCGGTAATGGTGGAGGTGGAGGCAAAGACAGAACCCGAACCAACAACAGCCATTAGAGAAGATTAAGATATTATACTGCTCAGTTTTTGCAGTGACTTTTATTTTTTAATTTTACTCCTTTTGTCTCTAGCCTTCCATTCCTTCTAACCTTCCATTACTTTAGCTAATACTTGTAAAGTTTTCTGACAGCTGTTGAGATTCTTATCAGGGAAAAGTTTTGGATCTTTCCATCAGTTCTGTTTTGGGAAGAAATTTTGTTGCCTTTTGTTGAACATTTCAACTGAATTGTGAATTCTCATTCCCTGATTTGTTTACAAGTTAAGGTGGATATCAGTTTTCACTACTATGCCACCCTTTTCGTTTTAATGTCTGTATGTTATTGTTGCAAA

mRNA sequence

AGATCCTTTCAAAAACTATATTGGACATTAATTTACAAAAGAAAAAACCGTTTCGAGAAATTATTTTGAGGATGAAGAACGAACCCCCCGCCATAACGGAAAGGTCCATAGCTTTGTTACTAGGCCTGAAAACTTTCCCAGTGAGAGATTTATTGCAATGGCCTAAAAGGGGAGGAAACTTCCCCAGGTCTGGCTTCTGGGTAGTTCTTTGGGTTCAGCCCCTTGGTTCTCTAAGAGGAATTCATGGCTGTGACAGCTTTGCTGTACCATTTGCTTTTTTGGTAGTTGTGGTGTTTCTTGTTATCTCAGTTCTGATTTCTGAACTTCCAATTTGCATTTACAATGCTTGTATGCTATATAAAAGGAATTGTGGAAAGATTTTCTTGCTGACTGGTGGAGAAGAATCAAGGAAGAGGGCTTTCCGGTTTTCCAAGACAAATCTATTTATAAAGGGCATTCTCCAACCCAAAACATCAATACCACCACATTCTGTAGCTTCGATTGGCCAACAGATGCACCATCAACCTGAGTCGGTTCACATGCTCCTTCAACATTTGAATCTCCACAGCAATCATACTCAATACTTTCTTTCTTCAATGGAGCAATTACAGCATGATTCACACATTTCCCCACAAAATGCCATAACCCTTGAAAAAACAAATCCAGCAACCCAACAGGGCCAGGGGGCTTTCGGGTATATGCATCCAGTTACAGTTCGTTGGTTGATGATAGAAGAGGAAAGAACAGAGGCAGGCTGGGGTAGTAGGAAGGAGTTGACCATGGCATCGACTTCTTTTGCTGGCGGGAAGCAACTGCCAGCAATTGAAGTGTCTTCAAACTGTGTTCCATACCCACCACCGCAAACAACATATGATGATATCGTAGCCAATCCGAAGATCTTTATGACTTCCTTGGAAAAGCTCCACTCTATCATGGGAACCAAGTTCATGATCCCCATTATTGGTGGGAAAGAACTAGACCTGCATCGGCTTTTTGTGGAGGTTACTTCTCGTGGTGGCATTGAGAAGAGGGTTGGTGAAATGCAAACGAGGACCTTGCCAAAACCTGTCAGGGCAGCGATTGCAGTTTCTTTGCTGCCCATCAAGGATTTAGTCTACGTCTACAATGCTGGAAGAATATGTTGTTATAAGAGAGAGAAGATGGAAAGAAATTCTTCTCCATGCCCAAGTGCAGCGACAATTCCTATGCAAGGGATGACCTCTATGTTGCCGCCATCAGATAATCAGGCAGTGTCCCAGCAACCACGGATTACTGAACTTCCAGCAGGTGTATTCTATGGTCCTTTGGAAATATACTCGGAATATAAGTTAGGGAGCAATATATTTGAGCGCTTCAATGCCTTCTTTACAATTTCTCCGAGTTCGACATCACCGGCAGGAGGGTTTCCAGTGATTGGAGTCATTGACGGAAAATTTGATAGCGGATATCTTGTTACTGTTACTGTTGGAACGGAGAAGCTAAAAGGTGTGCTTTATCAGGCTCCTTCTGAGCAACCTTCTCAGCAGCAAGTTTTGCAGCCTGTTGGTGCTTTTGCCAAAGATGGTGCTACCTCCACCGCACCAAATGCTCATCGCCGTCGTCGTCGGAAGAAATCTGAGATTAAGAGAAGGGATCCTGCTCATCCAAAGCCAAACAGAAGCGGCTACAACTTCTTCTTTGCTGAGCAGCATGCCAGACTCAAACCATTATACCCAGGGAAGGACAGGGAGATAAGCAGAATGATTGGTGACCTTTGGAATAAACTTAAAGAGTCTGAAAGAACAGTTTATCAGGAGAAAGCTATGAAAGATAAAGAAAGATACAGAATCGAGATGGAGGATTACAGAGAGAAGCTGAGGACAGGCCAAATCATCAGTGATGCAGTGCCCTTACAGCAGCGTCTTCCGGAACCAGACCTGAATATGGTCTATGCTGACAAAAATGAAGAAACCGAGGGCGGTGAGTCTCCTCAAACACCAGATAATGACACAAGCTATGTGGAAGGCGACTCCGGAGAGTATAAAACGGAAGAGAAGGAGGAGGAAGAAGAAGAAGATGAGGAGGAGGACTCGGAAGAAGATGCATCTCCACAAGGAATTGGTAATGTGGACGTTAACGTTTTTGTTGAGGAGGAACAGTGTGAGACGAGAACAGCCGAAGAGGATGTTAGAAAAGATAGTAGCATGGTCGGTGACGATAAAGAAGTTTACGCCGGGGATTCGGTAATGGTGGAGGTGGAGGCAAAGACAGAACCCGAACCAACAACAGCCATTAGAGAAGATTAAGATATTATACTGCTCAGTTTTTGCAGTGACTTTTATTTTTTAATTTTACTCCTTTTGTCTCTAGCCTTCCATTCCTTCTAACCTTCCATTACTTTAGCTAATACTTGTAAAGTTTTCTGACAGCTGTTGAGATTCTTATCAGGGAAAAGTTTTGGATCTTTCCATCAGTTCTGTTTTGGGAAGAAATTTTGTTGCCTTTTGTTGAACATTTCAACTGAATTGTGAATTCTCATTCCCTGATTTGTTTACAAGTTAAGGTGGATATCAGTTTTCACTACTATGCCACCCTTTTCGTTTTAATGTCTGTATGTTATTGTTGCAAA

Coding sequence (CDS)

ATGAAGAACGAACCCCCCGCCATAACGGAAAGGTCCATAGCTTTGTTACTAGGCCTGAAAACTTTCCCAGTGAGAGATTTATTGCAATGGCCTAAAAGGGGAGGAAACTTCCCCAGGTCTGGCTTCTGGGTAGTTCTTTGGGTTCAGCCCCTTGGTTCTCTAAGAGGAATTCATGGCTGTGACAGCTTTGCTGTACCATTTGCTTTTTTGGTAGTTGTGGTGTTTCTTGTTATCTCAGTTCTGATTTCTGAACTTCCAATTTGCATTTACAATGCTTGTATGCTATATAAAAGGAATTGTGGAAAGATTTTCTTGCTGACTGGTGGAGAAGAATCAAGGAAGAGGGCTTTCCGGTTTTCCAAGACAAATCTATTTATAAAGGGCATTCTCCAACCCAAAACATCAATACCACCACATTCTGTAGCTTCGATTGGCCAACAGATGCACCATCAACCTGAGTCGGTTCACATGCTCCTTCAACATTTGAATCTCCACAGCAATCATACTCAATACTTTCTTTCTTCAATGGAGCAATTACAGCATGATTCACACATTTCCCCACAAAATGCCATAACCCTTGAAAAAACAAATCCAGCAACCCAACAGGGCCAGGGGGCTTTCGGGTATATGCATCCAGTTACAGTTCGTTGGTTGATGATAGAAGAGGAAAGAACAGAGGCAGGCTGGGGTAGTAGGAAGGAGTTGACCATGGCATCGACTTCTTTTGCTGGCGGGAAGCAACTGCCAGCAATTGAAGTGTCTTCAAACTGTGTTCCATACCCACCACCGCAAACAACATATGATGATATCGTAGCCAATCCGAAGATCTTTATGACTTCCTTGGAAAAGCTCCACTCTATCATGGGAACCAAGTTCATGATCCCCATTATTGGTGGGAAAGAACTAGACCTGCATCGGCTTTTTGTGGAGGTTACTTCTCGTGGTGGCATTGAGAAGAGGGTTGGTGAAATGCAAACGAGGACCTTGCCAAAACCTGTCAGGGCAGCGATTGCAGTTTCTTTGCTGCCCATCAAGGATTTAGTCTACGTCTACAATGCTGGAAGAATATGTTGTTATAAGAGAGAGAAGATGGAAAGAAATTCTTCTCCATGCCCAAGTGCAGCGACAATTCCTATGCAAGGGATGACCTCTATGTTGCCGCCATCAGATAATCAGGCAGTGTCCCAGCAACCACGGATTACTGAACTTCCAGCAGGTGTATTCTATGGTCCTTTGGAAATATACTCGGAATATAAGTTAGGGAGCAATATATTTGAGCGCTTCAATGCCTTCTTTACAATTTCTCCGAGTTCGACATCACCGGCAGGAGGGTTTCCAGTGATTGGAGTCATTGACGGAAAATTTGATAGCGGATATCTTGTTACTGTTACTGTTGGAACGGAGAAGCTAAAAGGTGTGCTTTATCAGGCTCCTTCTGAGCAACCTTCTCAGCAGCAAGTTTTGCAGCCTGTTGGTGCTTTTGCCAAAGATGGTGCTACCTCCACCGCACCAAATGCTCATCGCCGTCGTCGTCGGAAGAAATCTGAGATTAAGAGAAGGGATCCTGCTCATCCAAAGCCAAACAGAAGCGGCTACAACTTCTTCTTTGCTGAGCAGCATGCCAGACTCAAACCATTATACCCAGGGAAGGACAGGGAGATAAGCAGAATGATTGGTGACCTTTGGAATAAACTTAAAGAGTCTGAAAGAACAGTTTATCAGGAGAAAGCTATGAAAGATAAAGAAAGATACAGAATCGAGATGGAGGATTACAGAGAGAAGCTGAGGACAGGCCAAATCATCAGTGATGCAGTGCCCTTACAGCAGCGTCTTCCGGAACCAGACCTGAATATGGTCTATGCTGACAAAAATGAAGAAACCGAGGGCGGTGAGTCTCCTCAAACACCAGATAATGACACAAGCTATGTGGAAGGCGACTCCGGAGAGTATAAAACGGAAGAGAAGGAGGAGGAAGAAGAAGAAGATGAGGAGGAGGACTCGGAAGAAGATGCATCTCCACAAGGAATTGGTAATGTGGACGTTAACGTTTTTGTTGAGGAGGAACAGTGTGAGACGAGAACAGCCGAAGAGGATGTTAGAAAAGATAGTAGCATGGTCGGTGACGATAAAGAAGTTTACGCCGGGGATTCGGTAATGGTGGAGGTGGAGGCAAAGACAGAACCCGAACCAACAACAGCCATTAGAGAAGATTAA

Protein sequence

MKNEPPAITERSIALLLGLKTFPVRDLLQWPKRGGNFPRSGFWVVLWVQPLGSLRGIHGCDSFAVPFAFLVVVVFLVISVLISELPICIYNACMLYKRNCGKIFLLTGGEESRKRAFRFSKTNLFIKGILQPKTSIPPHSVASIGQQMHHQPESVHMLLQHLNLHSNHTQYFLSSMEQLQHDSHISPQNAITLEKTNPATQQGQGAFGYMHPVTVRWLMIEEERTEAGWGSRKELTMASTSFAGGKQLPAIEVSSNCVPYPPPQTTYDDIVANPKIFMTSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKRVGEMQTRTLPKPVRAAIAVSLLPIKDLVYVYNAGRICCYKREKMERNSSPCPSAATIPMQGMTSMLPPSDNQAVSQQPRITELPAGVFYGPLEIYSEYKLGSNIFERFNAFFTISPSSTSPAGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAPSEQPSQQQVLQPVGAFAKDGATSTAPNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMEDYREKLRTGQIISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDNDTSYVEGDSGEYKTEEKEEEEEEDEEEDSEEDASPQGIGNVDVNVFVEEEQCETRTAEEDVRKDSSMVGDDKEVYAGDSVMVEVEAKTEPEPTTAIRED

Homology

[Close]

BLAST of CmUC06G115880 vs. NCBI nr
Match: XP_038876011.1 (LOW QUALITY PROTEIN: high mobility group B protein 15-like [Benincasa hispida])

HSP 1 Score: 773.1 bits (1995), Expect = 2.2e-219
Identity = 438/577 (75.91%), Postives = 462/577 (80.07%), Query Frame = 0


Query: 184 HISPQNAITLEKTNPATQ---------QGQG--AFGYMHPVTVRWLMIEEERTEAGWGSR 243
           H+   NA  L K N             +G+G   F       V WLMIEEERTEA WG R
Sbjct: 26  HLFSYNACMLHKRNCGXDFLADWRRRIKGEGFLVFQDKSMYKVHWLMIEEERTEASWGIR 85

Query: 244 KELTMASTSFAGGKQLPAIEVSSNCVPYPPPQTTYDDIVANPKIFMTSLEKLHSIMGTKF 303
           KELTMASTSFAGGKQLPAIEVSSNCVPYPPPQTTYDDIVANPKIFMTSLEKLHS+MGTKF
Sbjct: 86  KELTMASTSFAGGKQLPAIEVSSNCVPYPPPQTTYDDIVANPKIFMTSLEKLHSVMGTKF 145

Query: 304 MIPIIGGKELDLHRLFVEVTSRGGIEKRVGEMQ----TRTLPKPVRAAIAVSLLPIKDLV 363
           MIPIIGGKELDLHRLFVEVTSRGGIEK + E +    T     P  A  A  +L    L 
Sbjct: 146 MIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYLS 205

Query: 364 YVYNAGRICCYKR---EKMERNSSPCPSAATIPMQGMTSMLPPSDNQAVSQQPR--ITEL 423
            +++  +I  +K         +SS CPSAATIP Q MTSMLPPS+NQA SQQPR   TEL
Sbjct: 206 LLHHFEQIYFFKAVGWTPQISDSSTCPSAATIPTQAMTSMLPPSENQAASQQPRSTATEL 265

Query: 424 PAGVFYGPLEIYSEYKLGSNIFERFNAFFTISPSSTSPAGGFPVIGVIDGKFDSGYLVTV 483
           PA                            ++PSSTSPAGGFPVIGVIDGKFDSGYLVTV
Sbjct: 266 PA----------------------------VAPSSTSPAGGFPVIGVIDGKFDSGYLVTV 325

Query: 484 TVGTEKLKGVLYQAPSEQPSQQQVLQPVGAFAKDGATSTAPNAHRRRRRKKSEIKRRDPA 543
           TVGTEKLKGVLYQAPSEQPS+QQVLQ VGAFAKD ATST PNAHRRRRRKKSEIKRRDPA
Sbjct: 326 TVGTEKLKGVLYQAPSEQPSEQQVLQSVGAFAKDVATSTTPNAHRRRRRKKSEIKRRDPA 385

Query: 544 HPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKER 603
           HPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKER
Sbjct: 386 HPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKER 445

Query: 604 YRIEMEDYREKLRTGQIISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDNDTSYV 663
           YR+EMEDYREKLRTGQIISDAVPLQQRLPEPDLNMVYADKNEETEGGES QTPDNDTSYV
Sbjct: 446 YRVEMEDYREKLRTGQIISDAVPLQQRLPEPDLNMVYADKNEETEGGES-QTPDNDTSYV 505

Query: 664 EGDSGEYKTEEKEEEEEEDEE--EDSEEDASPQGIGNVDVNVFVEEEQCETRTAEED-VR 723
           EGDSGEYKTEEKEEEEEE+EE  EDSEEDASPQGIGNVDVN+  EEEQCET+TAEED VR
Sbjct: 506 EGDSGEYKTEEKEEEEEEEEEDSEDSEEDASPQGIGNVDVNILAEEEQCETKTAEEDAVR 565

Query: 724 KDSSMVGDDKEVYAGDSVMVEVEAKTEPEPTTAIRED 738
           K+SSMV DDKEVYAGDSVM+EVEAKTEPEPTT+IRED
Sbjct: 566 KESSMVRDDKEVYAGDSVMMEVEAKTEPEPTTSIRED 573

[Close]

BLAST of CmUC06G115880 vs. NCBI nr
Match: XP_011649091.1 (high mobility group B protein 15 isoform X2 [Cucumis sativus])

HSP 1 Score: 737.3 bits (1902), Expect = 1.3e-208
Identity = 415/543 (76.43%), Postives = 442/543 (81.40%), Query Frame = 0


Query: 215 VRWLMIEEERTEAGWGSRKELTMASTSFAGGKQLPAIEVSSNCVPYPPPQTTYDDIVANP 274
           V WLMIEEERTEAGWGSRKELTMASTSFAGGKQLP IEV+SNCVPYPPPQTTY+DI+AN 
Sbjct: 65  VHWLMIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANS 124

Query: 275 KIFMTSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKRVGEMQ----TRTLP 334
           KIFMT+LEKLHS+MGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK + E +    T    
Sbjct: 125 KIFMTALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFN 184

Query: 335 KPVRAAIAVSLLPIKDLVYVYNAGRICCYKR---EKMERNSSPCPSAATIPMQGMTSMLP 394
            P  A  A  +L    +  +++  +I  +K      +  +SSPCPSA+ IP QG+TSMLP
Sbjct: 185 FPSTATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQGVTSMLP 244

Query: 395 PSDNQAVSQQPR--ITELPAGVFYGPLEIYSEYKLGSNIFERFNAFFTISPSSTSPAGGF 454
           PSDNQA S QP+   TELPA                            +SPSSTSP GGF
Sbjct: 245 PSDNQAASHQPQSTATELPA----------------------------VSPSSTSPVGGF 304

Query: 455 PVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAPSEQPSQQQVLQPVGAFAKDGATSTAPN 514
           PVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAP EQPSQ QVLQPVGAFAKDG+T T PN
Sbjct: 305 PVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAP-EQPSQPQVLQPVGAFAKDGSTPTTPN 364

Query: 515 AHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKL 574
           AHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKL
Sbjct: 365 AHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKL 424

Query: 575 KESERTVYQEKAMKDKERYRIEMEDYREKLRTGQIISDAVPLQQRLPEPDLNMVYADKNE 634
           KESERTVYQEKAMKDKERYRIEM DYREKLRTGQIISDAVPLQQRLPEPDLNMVY DKNE
Sbjct: 425 KESERTVYQEKAMKDKERYRIEMVDYREKLRTGQIISDAVPLQQRLPEPDLNMVYGDKNE 484

Query: 635 ETEGGESPQTPDNDTSYVEGDSGEYKTEEKEEEE---EEDEEEDSEEDASPQGIGNVDVN 694
           ETEGGES QTPD+DTSYVEGDSGEYKTEEKEE+E   EEDEE+DSEEDASPQGIGNVDVN
Sbjct: 485 ETEGGES-QTPDHDTSYVEGDSGEYKTEEKEEDEEDDEEDEEDDSEEDASPQGIGNVDVN 544

Query: 695 VFVEEEQCETR-TAEEDVRKDSSMVGDDKEVYAGDSVMVEVEAKTEPEPTT-------AI 738
           + VEEEQCETR T  E+VRK+SS VGD KEV AGDSVMVEVEAK  PEPTT       AI
Sbjct: 545 ILVEEEQCETRTTGVENVRKESSTVGDKKEVLAGDSVMVEVEAKEVPEPTTAEPTTAAAI 577

[Close]

BLAST of CmUC06G115880 vs. NCBI nr
Match: XP_011649095.1 (high mobility group B protein 15 isoform X4 [Cucumis sativus] >XP_011649096.1 high mobility group B protein 15 isoform X4 [Cucumis sativus])

HSP 1 Score: 737.3 bits (1902), Expect = 1.3e-208
Identity = 415/543 (76.43%), Postives = 442/543 (81.40%), Query Frame = 0


Query: 215 VRWLMIEEERTEAGWGSRKELTMASTSFAGGKQLPAIEVSSNCVPYPPPQTTYDDIVANP 274
           V WLMIEEERTEAGWGSRKELTMASTSFAGGKQLP IEV+SNCVPYPPPQTTY+DI+AN 
Sbjct: 34  VHWLMIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANS 93

Query: 275 KIFMTSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKRVGEMQ----TRTLP 334
           KIFMT+LEKLHS+MGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK + E +    T    
Sbjct: 94  KIFMTALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFN 153

Query: 335 KPVRAAIAVSLLPIKDLVYVYNAGRICCYKR---EKMERNSSPCPSAATIPMQGMTSMLP 394
            P  A  A  +L    +  +++  +I  +K      +  +SSPCPSA+ IP QG+TSMLP
Sbjct: 154 FPSTATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQGVTSMLP 213

Query: 395 PSDNQAVSQQPR--ITELPAGVFYGPLEIYSEYKLGSNIFERFNAFFTISPSSTSPAGGF 454
           PSDNQA S QP+   TELPA                            +SPSSTSP GGF
Sbjct: 214 PSDNQAASHQPQSTATELPA----------------------------VSPSSTSPVGGF 273

Query: 455 PVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAPSEQPSQQQVLQPVGAFAKDGATSTAPN 514
           PVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAP EQPSQ QVLQPVGAFAKDG+T T PN
Sbjct: 274 PVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAP-EQPSQPQVLQPVGAFAKDGSTPTTPN 333

Query: 515 AHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKL 574
           AHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKL
Sbjct: 334 AHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKL 393

Query: 575 KESERTVYQEKAMKDKERYRIEMEDYREKLRTGQIISDAVPLQQRLPEPDLNMVYADKNE 634
           KESERTVYQEKAMKDKERYRIEM DYREKLRTGQIISDAVPLQQRLPEPDLNMVY DKNE
Sbjct: 394 KESERTVYQEKAMKDKERYRIEMVDYREKLRTGQIISDAVPLQQRLPEPDLNMVYGDKNE 453

Query: 635 ETEGGESPQTPDNDTSYVEGDSGEYKTEEKEEEE---EEDEEEDSEEDASPQGIGNVDVN 694
           ETEGGES QTPD+DTSYVEGDSGEYKTEEKEE+E   EEDEE+DSEEDASPQGIGNVDVN
Sbjct: 454 ETEGGES-QTPDHDTSYVEGDSGEYKTEEKEEDEEDDEEDEEDDSEEDASPQGIGNVDVN 513

Query: 695 VFVEEEQCETR-TAEEDVRKDSSMVGDDKEVYAGDSVMVEVEAKTEPEPTT-------AI 738
           + VEEEQCETR T  E+VRK+SS VGD KEV AGDSVMVEVEAK  PEPTT       AI
Sbjct: 514 ILVEEEQCETRTTGVENVRKESSTVGDKKEVLAGDSVMVEVEAKEVPEPTTAEPTTAAAI 546

[Close]

BLAST of CmUC06G115880 vs. NCBI nr
Match: XP_011649092.1 (high mobility group B protein 15 isoform X3 [Cucumis sativus])

HSP 1 Score: 737.3 bits (1902), Expect = 1.3e-208
Identity = 415/543 (76.43%), Postives = 442/543 (81.40%), Query Frame = 0


Query: 215 VRWLMIEEERTEAGWGSRKELTMASTSFAGGKQLPAIEVSSNCVPYPPPQTTYDDIVANP 274
           V WLMIEEERTEAGWGSRKELTMASTSFAGGKQLP IEV+SNCVPYPPPQTTY+DI+AN 
Sbjct: 60  VHWLMIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANS 119

Query: 275 KIFMTSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKRVGEMQ----TRTLP 334
           KIFMT+LEKLHS+MGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK + E +    T    
Sbjct: 120 KIFMTALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFN 179

Query: 335 KPVRAAIAVSLLPIKDLVYVYNAGRICCYKR---EKMERNSSPCPSAATIPMQGMTSMLP 394
            P  A  A  +L    +  +++  +I  +K      +  +SSPCPSA+ IP QG+TSMLP
Sbjct: 180 FPSTATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQGVTSMLP 239

Query: 395 PSDNQAVSQQPR--ITELPAGVFYGPLEIYSEYKLGSNIFERFNAFFTISPSSTSPAGGF 454
           PSDNQA S QP+   TELPA                            +SPSSTSP GGF
Sbjct: 240 PSDNQAASHQPQSTATELPA----------------------------VSPSSTSPVGGF 299

Query: 455 PVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAPSEQPSQQQVLQPVGAFAKDGATSTAPN 514
           PVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAP EQPSQ QVLQPVGAFAKDG+T T PN
Sbjct: 300 PVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAP-EQPSQPQVLQPVGAFAKDGSTPTTPN 359

Query: 515 AHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKL 574
           AHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKL
Sbjct: 360 AHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKL 419

Query: 575 KESERTVYQEKAMKDKERYRIEMEDYREKLRTGQIISDAVPLQQRLPEPDLNMVYADKNE 634
           KESERTVYQEKAMKDKERYRIEM DYREKLRTGQIISDAVPLQQRLPEPDLNMVY DKNE
Sbjct: 420 KESERTVYQEKAMKDKERYRIEMVDYREKLRTGQIISDAVPLQQRLPEPDLNMVYGDKNE 479

Query: 635 ETEGGESPQTPDNDTSYVEGDSGEYKTEEKEEEE---EEDEEEDSEEDASPQGIGNVDVN 694
           ETEGGES QTPD+DTSYVEGDSGEYKTEEKEE+E   EEDEE+DSEEDASPQGIGNVDVN
Sbjct: 480 ETEGGES-QTPDHDTSYVEGDSGEYKTEEKEEDEEDDEEDEEDDSEEDASPQGIGNVDVN 539

Query: 695 VFVEEEQCETR-TAEEDVRKDSSMVGDDKEVYAGDSVMVEVEAKTEPEPTT-------AI 738
           + VEEEQCETR T  E+VRK+SS VGD KEV AGDSVMVEVEAK  PEPTT       AI
Sbjct: 540 ILVEEEQCETRTTGVENVRKESSTVGDKKEVLAGDSVMVEVEAKEVPEPTTAEPTTAAAI 572

[Close]

BLAST of CmUC06G115880 vs. NCBI nr
Match: XP_011649090.1 (high mobility group B protein 15 isoform X1 [Cucumis sativus])

HSP 1 Score: 737.3 bits (1902), Expect = 1.3e-208
Identity = 415/543 (76.43%), Postives = 442/543 (81.40%), Query Frame = 0


Query: 215 VRWLMIEEERTEAGWGSRKELTMASTSFAGGKQLPAIEVSSNCVPYPPPQTTYDDIVANP 274
           V WLMIEEERTEAGWGSRKELTMASTSFAGGKQLP IEV+SNCVPYPPPQTTY+DI+AN 
Sbjct: 67  VHWLMIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANS 126

Query: 275 KIFMTSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKRVGEMQ----TRTLP 334
           KIFMT+LEKLHS+MGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK + E +    T    
Sbjct: 127 KIFMTALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFN 186

Query: 335 KPVRAAIAVSLLPIKDLVYVYNAGRICCYKR---EKMERNSSPCPSAATIPMQGMTSMLP 394
            P  A  A  +L    +  +++  +I  +K      +  +SSPCPSA+ IP QG+TSMLP
Sbjct: 187 FPSTATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQGVTSMLP 246

Query: 395 PSDNQAVSQQPR--ITELPAGVFYGPLEIYSEYKLGSNIFERFNAFFTISPSSTSPAGGF 454
           PSDNQA S QP+   TELPA                            +SPSSTSP GGF
Sbjct: 247 PSDNQAASHQPQSTATELPA----------------------------VSPSSTSPVGGF 306

Query: 455 PVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAPSEQPSQQQVLQPVGAFAKDGATSTAPN 514
           PVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAP EQPSQ QVLQPVGAFAKDG+T T PN
Sbjct: 307 PVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAP-EQPSQPQVLQPVGAFAKDGSTPTTPN 366

Query: 515 AHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKL 574
           AHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKL
Sbjct: 367 AHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKL 426

Query: 575 KESERTVYQEKAMKDKERYRIEMEDYREKLRTGQIISDAVPLQQRLPEPDLNMVYADKNE 634
           KESERTVYQEKAMKDKERYRIEM DYREKLRTGQIISDAVPLQQRLPEPDLNMVY DKNE
Sbjct: 427 KESERTVYQEKAMKDKERYRIEMVDYREKLRTGQIISDAVPLQQRLPEPDLNMVYGDKNE 486

Query: 635 ETEGGESPQTPDNDTSYVEGDSGEYKTEEKEEEE---EEDEEEDSEEDASPQGIGNVDVN 694
           ETEGGES QTPD+DTSYVEGDSGEYKTEEKEE+E   EEDEE+DSEEDASPQGIGNVDVN
Sbjct: 487 ETEGGES-QTPDHDTSYVEGDSGEYKTEEKEEDEEDDEEDEEDDSEEDASPQGIGNVDVN 546

Query: 695 VFVEEEQCETR-TAEEDVRKDSSMVGDDKEVYAGDSVMVEVEAKTEPEPTT-------AI 738
           + VEEEQCETR T  E+VRK+SS VGD KEV AGDSVMVEVEAK  PEPTT       AI
Sbjct: 547 ILVEEEQCETRTTGVENVRKESSTVGDKKEVLAGDSVMVEVEAKEVPEPTTAEPTTAAAI 579

[Close]

BLAST of CmUC06G115880 vs. ExPASy Swiss-Prot
Match: Q9MAT6 (High mobility group B protein 15 OS=Arabidopsis thaliana OX=3702 GN=HMGB15 PE=2 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 4.2e-80
Identity = 205/443 (46.28%), Postives = 267/443 (60.27%), Query Frame = 0


Query: 250 AIEVSSNCVPYPPPQTTYDDIVANPKIFMTSLEKLHSIMGTKFMIPIIGGKELDLHRLFV 309
           ++ +++ CV    P+ TY+ +VA+P++FMTSLE+LHS++GTKFM+PIIGG++LDLH+LFV
Sbjct: 11  SVPMNNVCV---TPEATYEAVVADPRLFMTSLERLHSLLGTKFMVPIIGGRDLDLHKLFV 70

Query: 310 EVTSRGGIEKRVGEMQ----TRTLPKPVRAAIAVSLLPIKDLVYVYNAGRICCYKRE-KM 369
           EVTSRGGI K + E +    T T   P  A  A  +L       + N  +I  ++   ++
Sbjct: 71  EVTSRGGINKILNERRWKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFFRSNGQI 130

Query: 370 ERNSSPCPSAATIPMQGMTSMLPPSDNQAVSQQPRITELPAGVFYGPLEIYSEYKLGSNI 429
             +S   PSA    +QG  ++ P  + QA++  P+           P    +E+  GS  
Sbjct: 131 PPDSMQSPSARPCFIQG--AIRPSQELQALTFTPQ-----------PKINTAEFLGGS-- 190

Query: 430 FERFNAFFTISPSSTSPAGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQ-APSEQPS 489
                              G  V+GVIDGKF+SGYLVTVT+G+E+LKGVLYQ  P    S
Sbjct: 191 -----------------LAGSNVVGVIDGKFESGYLVTVTIGSEQLKGVLYQLLPQNTVS 250

Query: 490 QQQVLQPVGAFAKDGATSTAPN------AHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA 549
            Q   Q  G        S  P         RRRRRKKSEIKRRDP HPKPNRSGYNFFFA
Sbjct: 251 YQTPQQSHGVLPNTLNISANPQGVAGGVTKRRRRRKKSEIKRRDPDHPKPNRSGYNFFFA 310

Query: 550 EQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMEDYREKLRT 609
           EQHARLKPL+PGKDR+ISRMIG+LWNKL E E+ +YQ KAM+DKERYR EMEDYREK + 
Sbjct: 311 EQHARLKPLHPGKDRDISRMIGELWNKLNEDEKLIYQGKAMEDKERYRTEMEDYREKKKN 370

Query: 610 GQIISDAVPLQQRLPEPDLNMVYAD-----KNEETEGGESPQTPDNDTSYVEGDSGEYKT 669
           GQ+IS+AVPLQQRLPE +++M  AD       E+ E G+S            G SGE  +
Sbjct: 371 GQLISNAVPLQQRLPEQNVDMAEADLPIDEVEEDDEEGDS-----------SGSSGE--S 405

Query: 670 EEKEEEEEEDEEEDSEEDASPQG 676
           E  +++  E + E  E   +P G
Sbjct: 431 EPHDDQSIETDPELEEPSLNPSG 405

[Close]

BLAST of CmUC06G115880 vs. ExPASy Swiss-Prot
Match: Q9SGS2 (High mobility group B protein 9 OS=Arabidopsis thaliana OX=3702 GN=HMGB9 PE=1 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.8e-46
Identity = 128/339 (37.76%), Postives = 176/339 (51.92%), Query Frame = 0


Query: 260 YPPPQTTYDDIVANPKIFMTSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK 319
           YP P   ++ +V +  +F  +L + HSIM TKFMIP+IGGKELDLH L+VEVT RGG EK
Sbjct: 27  YPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGYEK 86

Query: 320 RVGEMQTRTLPKPVRAAIAVSLLPIKDLVYVYNAGRICCYKREKMERNSSPCPSAATIPM 379
            V E + R +    R +   +        +  N      +  E++   ++  P       
Sbjct: 87  VVVEKKWREVGGVFRFSATTTSASFVLRKHYLN----LLFHYEQVHLFTARGP------- 146

Query: 380 QGMTSMLPPSDNQAVSQQPRITELPAGVFYGPLEIYSEYKLGSNIFERFNAFFTISPSST 439
                +L P         P  ++  A V Y P  I            R++     S  S+
Sbjct: 147 -----LLHPI--ATFHANPSTSKEMALVEYTPPSI------------RYHNTHPPSQGSS 206

Query: 440 SPAGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAPSEQPSQQQVLQPVGAFAKDGA 499
           S    F  IG I+GKFD GYLV V +G+E L GVLY +    PS         A   +  
Sbjct: 207 S----FTAIGTIEGKFDCGYLVKVKLGSEILNGVLYHSAQPGPSSSPT-----AVLNNAV 266

Query: 500 TSTAPNAHRRRR--RKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRM 559
                   RRRR  +++   +R DP +PKPNRSGYNFFFAE+H +LK LYP K+RE +++
Sbjct: 267 VPYVETGRRRRRLGKRRRSRRREDPNYPKPNRSGYNFFFAEKHCKLKSLYPNKEREFTKL 326

Query: 560 IGDLWNKLKESERTVYQEKAMKDKERYRIEMEDYREKLR 597
           IG+ W+ L   ER VYQ+  +KDKERY+ E+ +YRE LR
Sbjct: 327 IGESWSNLSTEERMVYQDIGLKDKERYQRELNEYRETLR 326

[Close]

BLAST of CmUC06G115880 vs. ExPASy Swiss-Prot
Match: Q9LTT3 (High mobility group B protein 10 OS=Arabidopsis thaliana OX=3702 GN=HMGB10 PE=1 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 7.7e-42
Identity = 120/340 (35.29%), Postives = 167/340 (49.12%), Query Frame = 0


Query: 267 YDDIVANPKIFMTSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKRVGEMQT 326
           YDD+V N  +F   L     +      +P +GG  LDLHRLF+EVTSRGGIE+ V + + 
Sbjct: 36  YDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDRKW 95

Query: 327 R----TLPKPVRAAIAVSLLPIKDLVYVYNAGRICCYKREKMERNSSPCPSAATIPMQGM 386
           +        P     A  +L    L +++    +  Y  EK      P  S     +Q  
Sbjct: 96  KEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHV--YYLEK------PVSS-----LQST 155

Query: 387 TSMLPPSDNQAVSQQPRITELPAGVFYGPLEIYSEYKLGSNIFERFNAFFTISPSSTSPA 446
              L    N++ + +  I E                                      P 
Sbjct: 156 DEALKSLANESPNPEEGIDE--------------------------------------PQ 215

Query: 447 GGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAPSEQPSQQQVLQPVGAFAKDGATST 506
            G+ V G IDGKFDSGYLVT+ +G+++LKGVLY  P      QQ ++   A  +      
Sbjct: 216 VGYEVQGFIDGKFDSGYLVTMKLGSQELKGVLYHIPQTPSQSQQTMETPSAIVQ------ 275

Query: 507 APNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLW 566
              + +RR RKKS++   D   PK +RSGYNFFFAEQ+ARLKP Y G++R I++ IG +W
Sbjct: 276 ---SSQRRHRKKSKLAVVDTQKPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMW 315

Query: 567 NKLKESERTVYQEKAMKDKERYRIEMEDYREKLRTGQIIS 603
           + L ESE+ VYQ+K +KD ERYRIEM +Y+    +G   S
Sbjct: 336 SNLTESEKQVYQDKGVKDVERYRIEMLEYKSSHESGATAS 315

[Close]

BLAST of CmUC06G115880 vs. ExPASy Swiss-Prot
Match: Q9LG02 (Putative high mobility group B protein 11 OS=Arabidopsis thaliana OX=3702 GN=HMGB11 PE=1 SV=2)

HSP 1 Score: 134.4 bits (337), Expect = 5.2e-30
Identity = 101/338 (29.88%), Postives = 152/338 (44.97%), Query Frame = 0


Query: 267 YDDIVANPKIFMTSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKRVGEMQT 326
           Y DIV NP++F   L   H     KF IPI+GGK LDLHRLF EVTSRGG+EK + + + 
Sbjct: 30  YQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRR- 89

Query: 327 RTLPKPVRAAIAVSLLPIKDLVYVYNAGRICCYKREKMERNSSPCPSAATIPMQGMTSML 386
                             K+++  +N                +   ++A +  +    ML
Sbjct: 90  -----------------CKEVIDAFNF--------------KTTITNSAFVLRKSYLKML 149

Query: 387 PPSDNQAVSQQPRITELPAGVFYGPLEIYSEYKLGSNIFERFNAFFTISPSSTSPAGGFP 446
              ++                F  PL  + E +    +    +A          P  G  
Sbjct: 150 FEFEH-------------LYYFQAPLSTFWEKEKALKLLIEKSANRDKDSQELKP--GTV 209

Query: 447 VIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAPSEQPSQQQVLQPVGAFAKDGATSTAPNA 506
           + G+IDGKF+SGYL++  VG+EKLKG+LY            + P     K  A S+  ++
Sbjct: 210 ITGIIDGKFESGYLISTKVGSEKLKGMLYH-----------ISPETKRGKKKAKSSQGDS 269

Query: 507 HRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLK 566
           H+                PK  R+GYNFF AEQ  R+K    G+     +  G++W  L 
Sbjct: 270 HK---------------PPKRQRTGYNFFVAEQSVRIKAENAGQKVSSPKNFGNMWTNLS 294

Query: 567 ESERTVYQEKAMKDKERYRIEMEDYREKL--RTGQIIS 603
           ES+R VY EK+ +D +RY++E+  YR  +  R  +I++
Sbjct: 330 ESDRKVYYEKSREDGKRYKMEILQYRSLMESRVAEIVA 294

[Close]

BLAST of CmUC06G115880 vs. ExPASy Swiss-Prot
Match: Q32L31 (High mobility group protein B3 OS=Bos taurus OX=9913 GN=HMGB3 PE=2 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 8.3e-04
Identity = 43/152 (28.29%), Postives = 69/152 (45.39%), Query Frame = 0


Query: 518 KRRDPAHPKPNRSGYNFFFAEQHARLKPLYPG-KDREISRMIGDLWNKLKESERTVYQEK 577
           K++DP  PK   SG+  F +E   ++K   PG    ++++ +G++WN L +SE+  Y  K
Sbjct: 86  KKKDPNAPKRPPSGFFLFCSEFRPKIKSANPGISIGDVAKKLGEMWNNLSDSEKQPYINK 145

Query: 578 AMKDKERYRIEMEDYREKLRTGQIISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTP 637
           A K KE+Y  ++ DY+ K +       A   ++++ E D                     
Sbjct: 146 AAKLKEKYEKDVADYKSKGKFDGAKGAAKVARKKVEEED--------------------- 200

Query: 638 DNDTSYVEGDSGEYKTEEKEEEEEEDEEEDSE 669
                           EE EEEEEE+EEE+ E
Sbjct: 206 ----------------EEDEEEEEEEEEEEDE 200

[Close]

BLAST of CmUC06G115880 vs. ExPASy TrEMBL
Match: A0A0A0LL59 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G138760 PE=4 SV=1)

HSP 1 Score: 729.9 bits (1883), Expect = 1.0e-206
Identity = 412/539 (76.44%), Postives = 439/539 (81.45%), Query Frame = 0


Query: 219 MIEEERTEAGWGSRKELTMASTSFAGGKQLPAIEVSSNCVPYPPPQTTYDDIVANPKIFM 278
           MIEEERTEAGWGSRKELTMASTSFAGGKQLP IEV+SNCVPYPPPQTTY+DI+AN KIFM
Sbjct: 1   MIEEERTEAGWGSRKELTMASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFM 60

Query: 279 TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKRVGEMQ----TRTLPKPVR 338
           T+LEKLHS+MGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK + E +    T     P  
Sbjct: 61  TALEKLHSLMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120

Query: 339 AAIAVSLLPIKDLVYVYNAGRICCYKR---EKMERNSSPCPSAATIPMQGMTSMLPPSDN 398
           A  A  +L    +  +++  +I  +K      +  +SSPCPSA+ IP QG+TSMLPPSDN
Sbjct: 121 ATNASFVLRKYYISLLHHFEQIYFFKAVGWTPVTSDSSPCPSASAIPTQGVTSMLPPSDN 180

Query: 399 QAVSQQPR--ITELPAGVFYGPLEIYSEYKLGSNIFERFNAFFTISPSSTSPAGGFPVIG 458
           QA S QP+   TELPA                            +SPSSTSP GGFPVIG
Sbjct: 181 QAASHQPQSTATELPA----------------------------VSPSSTSPVGGFPVIG 240

Query: 459 VIDGKFDSGYLVTVTVGTEKLKGVLYQAPSEQPSQQQVLQPVGAFAKDGATSTAPNAHRR 518
           VIDGKFDSGYLVTVTVGTEKLKGVLYQAP EQPSQ QVLQPVGAFAKDG+T T PNAHRR
Sbjct: 241 VIDGKFDSGYLVTVTVGTEKLKGVLYQAP-EQPSQPQVLQPVGAFAKDGSTPTTPNAHRR 300

Query: 519 RRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESE 578
           RRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESE
Sbjct: 301 RRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESE 360

Query: 579 RTVYQEKAMKDKERYRIEMEDYREKLRTGQIISDAVPLQQRLPEPDLNMVYADKNEETEG 638
           RTVYQEKAMKDKERYRIEM DYREKLRTGQIISDAVPLQQRLPEPDLNMVY DKNEETEG
Sbjct: 361 RTVYQEKAMKDKERYRIEMVDYREKLRTGQIISDAVPLQQRLPEPDLNMVYGDKNEETEG 420

Query: 639 GESPQTPDNDTSYVEGDSGEYKTEEKEEEE---EEDEEEDSEEDASPQGIGNVDVNVFVE 698
           GES QTPD+DTSYVEGDSGEYKTEEKEE+E   EEDEE+DSEEDASPQGIGNVDVN+ VE
Sbjct: 421 GES-QTPDHDTSYVEGDSGEYKTEEKEEDEEDDEEDEEDDSEEDASPQGIGNVDVNILVE 480

Query: 699 EEQCETR-TAEEDVRKDSSMVGDDKEVYAGDSVMVEVEAKTEPEPTT-------AIRED 738
           EEQCETR T  E+VRK+SS VGD KEV AGDSVMVEVEAK  PEPTT       AIRED
Sbjct: 481 EEQCETRTTGVENVRKESSTVGDKKEVLAGDSVMVEVEAKEVPEPTTAEPTTAAAIRED 509

[Close]

BLAST of CmUC06G115880 vs. ExPASy TrEMBL
Match: A0A5A7SQV2 (High mobility group B protein 15 isoform X5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G001100 PE=4 SV=1)

HSP 1 Score: 699.5 bits (1804), Expect = 1.5e-197
Identity = 394/515 (76.50%), Postives = 422/515 (81.94%), Query Frame = 0


Query: 237 MASTSFAGGKQLPAIEVSSNCVPYPPPQTTYDDIVANPKIFMTSLEKLHSIMGTKFMIPI 296
           MASTSFAGGKQLP IEV+SNCVPYPPPQTTY+DI+AN KIFMT+LEKLHS+MGTKFMIPI
Sbjct: 1   MASTSFAGGKQLPVIEVASNCVPYPPPQTTYEDIIANSKIFMTALEKLHSLMGTKFMIPI 60

Query: 297 IGGKELDLHRLFVEVTSRGGIEKRVGEMQ----TRTLPKPVRAAIAVSLLPIKDLVYVYN 356
           IGGKELDLHRLFVEVTSRGGIEK + E +    T     P  A  A  +L    +  +++
Sbjct: 61  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYISLLHH 120

Query: 357 AGRICCYKR---EKMERNSSPCPSAATIPMQGMTSMLPPSDNQAVSQQPR--ITELPAGV 416
             +I  +K      +  +SSPCPSA+ IP QG+TSMLPPSDNQA S QPR   TELPA  
Sbjct: 121 FEQIYFFKAVGWTPVTSDSSPCPSASAIPTQGVTSMLPPSDNQAASHQPRSIATELPA-- 180

Query: 417 FYGPLEIYSEYKLGSNIFERFNAFFTISPSSTSPAGGFPVIGVIDGKFDSGYLVTVTVGT 476
                                     +S SSTSPAGGFPVIGVIDGKFDSGYLVTVTVGT
Sbjct: 181 --------------------------VSLSSTSPAGGFPVIGVIDGKFDSGYLVTVTVGT 240

Query: 477 EKLKGVLYQAPSEQPSQQQVLQPVGAFAKDGATSTAPNAHRRRRRKKSEIKRRDPAHPKP 536
           EKLKGVLYQAP EQPSQ QVLQPVGAFAKDG+T T PNAHRRRRRKKSEIKRRDPAHPKP
Sbjct: 241 EKLKGVLYQAP-EQPSQPQVLQPVGAFAKDGSTPTTPNAHRRRRRKKSEIKRRDPAHPKP 300

Query: 537 NRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIE 596
           NRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIE
Sbjct: 301 NRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIE 360

Query: 597 MEDYREKLRTGQIISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDNDTSYVEGDS 656
           M DYREKLRTGQIISDAVPLQQRLPEPDLNMVY DKNEETEGGES QTPD+DTSYVEGDS
Sbjct: 361 MVDYREKLRTGQIISDAVPLQQRLPEPDLNMVYGDKNEETEGGES-QTPDHDTSYVEGDS 420

Query: 657 GEYKTEEKEEEEEED----EEEDSEEDASPQGIGNVDVNVFVEEEQCETRTAEEDVRKDS 716
           GEYKTEEK+E+EE+D    EE+DSEEDASPQGIGNVDVN+ VEEEQCETRT  E+VRK+S
Sbjct: 421 GEYKTEEKDEDEEDDEEDEEEDDSEEDASPQGIGNVDVNILVEEEQCETRTGVENVRKES 480

Query: 717 SMVGDDKEVYAGDSVMVEVEAKTEPEPTT-AIRED 738
           S VGD KEV AGDSVMVEVEAK EPEPTT AIRED
Sbjct: 481 STVGDKKEVLAGDSVMVEVEAKEEPEPTTAAIRED 485

[Close]

BLAST of CmUC06G115880 vs. ExPASy TrEMBL
Match: A0A6J1CAI2 (high mobility group B protein 15 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111009817 PE=4 SV=1)

HSP 1 Score: 689.5 bits (1778), Expect = 1.5e-194
Identity = 393/535 (73.46%), Postives = 425/535 (79.44%), Query Frame = 0


Query: 219 MIEEERTEAGWGSRKELTMASTSFAGGKQLPAIEVSSNCVPYPPPQTTYDDIVANPKIFM 278
           M+EEERTEAGWGSRKELTMASTSF GGK LP IE SSNCV YPPPQ TY+DI+ NPKIFM
Sbjct: 1   MVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFM 60

Query: 279 TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKRVGEMQ----TRTLPKPVR 338
           TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK + E +    T     P  
Sbjct: 61  TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120

Query: 339 AAIAVSLLPIKDLVYVYNAGRICCYKR---EKMERNSSPCPSAATIPMQGMTSMLPPSDN 398
           A  A  +L    L  +++  +I  +K      M  +S  CPS A IP QG  SM PPSDN
Sbjct: 121 ATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISDSPQCPSPAPIPTQGTPSMWPPSDN 180

Query: 399 Q-AVSQQPR--ITELPAGVFYGPLEIYSEYKLGSNIFERFNAFFTISPSSTSPAGGFPVI 458
           Q A+SQQPR   TELPA   + P                     T++PSS S A GFPVI
Sbjct: 181 QAAMSQQPRTSTTELPADSTFLP---------------------TVAPSSAS-AAGFPVI 240

Query: 459 GVIDGKFDSGYLVTVTVGTEKLKGVLYQAPSEQPSQQQVLQPVGAFAKDGATSTAPNAHR 518
           GVIDGKFDSGYLVTVT+G+EKLKGVLYQ+P EQP+QQQVLQP G FAKDGATS APNAHR
Sbjct: 241 GVIDGKFDSGYLVTVTIGSEKLKGVLYQSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHR 300

Query: 519 RRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKES 578
           RRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIG+LWNKL ES
Sbjct: 301 RRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGELWNKLNES 360

Query: 579 ERTVYQEKAMKDKERYRIEMEDYREKLRTGQIISDAVPLQQRLPEPDLNMVYADKNEETE 638
           +RTVYQEKAMKDKERYRIEMEDYREKLRTGQ+ISDAVPLQQRLPEPDLNMVYADKNEETE
Sbjct: 361 DRTVYQEKAMKDKERYRIEMEDYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKNEETE 420

Query: 639 GGESPQTPDNDTSYVEGDSGEYKTEEKEEEEEEDEEEDSEEDASPQGIGNVDVNVFVEEE 698
           GGESPQTPD+DTSYVEGDSGEYKTEEK    EEDEEEDSEEDASPQ +GNVDVNV VEEE
Sbjct: 421 GGESPQTPDHDTSYVEGDSGEYKTEEK----EEDEEEDSEEDASPQRVGNVDVNVLVEEE 480

Query: 699 -QCETRTAEEDVRKDSS--MVGDDKEVYAGDSVMVEVEAKTE---PEPTTAIRED 738
              ETR AEEDVRK+SS  +VGD+KEV+  DS+M E + + E   P PTTAIRED
Sbjct: 481 GGGETRAAEEDVRKESSTVVVGDEKEVFTRDSLMEEAKEEPEPPPPPPTTAIRED 509

[Close]

BLAST of CmUC06G115880 vs. ExPASy TrEMBL
Match: A0A6J1CAX2 (high mobility group B protein 15 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111009817 PE=4 SV=1)

HSP 1 Score: 684.1 bits (1764), Expect = 6.4e-193
Identity = 391/535 (73.08%), Postives = 422/535 (78.88%), Query Frame = 0


Query: 219 MIEEERTEAGWGSRKELTMASTSFAGGKQLPAIEVSSNCVPYPPPQTTYDDIVANPKIFM 278
           M+EEERTEAGWGSRKELTMASTSF GGK LP IE SSNCV YPPPQ TY+DI+ NPKIFM
Sbjct: 1   MVEEERTEAGWGSRKELTMASTSFPGGKPLPVIETSSNCVLYPPPQATYEDIIGNPKIFM 60

Query: 279 TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKRVGEMQ----TRTLPKPVR 338
           TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK + E +    T     P  
Sbjct: 61  TSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPST 120

Query: 339 AAIAVSLLPIKDLVYVYNAGRICCYKR---EKMERNSSPCPSAATIPMQGMTSMLPPSDN 398
           A  A  +L    L  +++  +I  +K      M  +S  CPS A IP QG  SM PPSDN
Sbjct: 121 ATNASFVLRKYYLSLLHHFEQIHFFKAVGWTPMISDSPQCPSPAPIPTQGTPSMWPPSDN 180

Query: 399 Q-AVSQQPR--ITELPAGVFYGPLEIYSEYKLGSNIFERFNAFFTISPSSTSPAGGFPVI 458
           Q A+SQQPR   TELPA                            ++PSS S A GFPVI
Sbjct: 181 QAAMSQQPRTSTTELPA----------------------------VAPSSAS-AAGFPVI 240

Query: 459 GVIDGKFDSGYLVTVTVGTEKLKGVLYQAPSEQPSQQQVLQPVGAFAKDGATSTAPNAHR 518
           GVIDGKFDSGYLVTVT+G+EKLKGVLYQ+P EQP+QQQVLQP G FAKDGATS APNAHR
Sbjct: 241 GVIDGKFDSGYLVTVTIGSEKLKGVLYQSPPEQPAQQQVLQPDGVFAKDGATSMAPNAHR 300

Query: 519 RRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKES 578
           RRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIG+LWNKL ES
Sbjct: 301 RRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGELWNKLNES 360

Query: 579 ERTVYQEKAMKDKERYRIEMEDYREKLRTGQIISDAVPLQQRLPEPDLNMVYADKNEETE 638
           +RTVYQEKAMKDKERYRIEMEDYREKLRTGQ+ISDAVPLQQRLPEPDLNMVYADKNEETE
Sbjct: 361 DRTVYQEKAMKDKERYRIEMEDYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKNEETE 420

Query: 639 GGESPQTPDNDTSYVEGDSGEYKTEEKEEEEEEDEEEDSEEDASPQGIGNVDVNVFVEEE 698
           GGESPQTPD+DTSYVEGDSGEYKTEEK    EEDEEEDSEEDASPQ +GNVDVNV VEEE
Sbjct: 421 GGESPQTPDHDTSYVEGDSGEYKTEEK----EEDEEEDSEEDASPQRVGNVDVNVLVEEE 480

Query: 699 -QCETRTAEEDVRKDSS--MVGDDKEVYAGDSVMVEVEAKTE---PEPTTAIRED 738
              ETR AEEDVRK+SS  +VGD+KEV+  DS+M E + + E   P PTTAIRED
Sbjct: 481 GGGETRAAEEDVRKESSTVVVGDEKEVFTRDSLMEEAKEEPEPPPPPPTTAIRED 502

[Close]

BLAST of CmUC06G115880 vs. ExPASy TrEMBL
Match: A0A6J1KXI8 (high mobility group B protein 15-like OS=Cucurbita maxima OX=3661 GN=LOC111499106 PE=4 SV=1)

HSP 1 Score: 661.8 bits (1706), Expect = 3.4e-186
Identity = 372/510 (72.94%), Postives = 404/510 (79.22%), Query Frame = 0


Query: 237 MASTSFAGGKQLPAIEVSSNCVPYPPPQTTYDDIVANPKIFMTSLEKLHSIMGTKFMIPI 296
           MASTSFAG KQLP IE +S+C+PYPPPQTTY+DIVANP IFM SLEKLHS+MGTKFMIPI
Sbjct: 1   MASTSFAGRKQLPVIEATSSCIPYPPPQTTYEDIVANPNIFMASLEKLHSVMGTKFMIPI 60

Query: 297 IGGKELDLHRLFVEVTSRGGIEKRVGEMQ----TRTLPKPVRAAIAVSLLPIKDLVYVYN 356
           IGGKELDLHRLFVEVTSRGGIEK + E +    T     P  A  A  +L    L  +++
Sbjct: 61  IGGKELDLHRLFVEVTSRGGIEKVIRERRWKEVTSVFNFPSTATNASFVLRKYYLSLLHH 120

Query: 357 AGRICCYKR---EKMERNSSPCPSAATIPMQGMTSMLPPSDNQAVSQQPR--ITELPAGV 416
             +I  +K      +  +SS CPSAATIP QG  SMLPPSDNQA SQ PR   TELPA  
Sbjct: 121 FEQIYFFKAVGWTPIISDSSLCPSAATIPTQGTASMLPPSDNQAASQPPRSTATELPA-- 180

Query: 417 FYGPLEIYSEYKLGSNIFERFNAFFTISPSSTSPAGGFPVIGVIDGKFDSGYLVTVTVGT 476
                                     ++P STSPAGGFPVIGVIDGKFDSGYL+TVTVGT
Sbjct: 181 --------------------------VAPGSTSPAGGFPVIGVIDGKFDSGYLITVTVGT 240

Query: 477 EKLKGVLYQAPSEQPSQQQVLQPVGAFAKDGATSTAPNAHRRRRRKKSEIKRRDPAHPKP 536
           EKLKGVLYQA SEQP+     QPVG FAKDG     PNAH+ RRRKK EIKRRDP HPKP
Sbjct: 241 EKLKGVLYQASSEQPT-----QPVGVFAKDG----TPNAHQHRRRKKYEIKRRDPGHPKP 300

Query: 537 NRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIE 596
           NRSGYNFFFAEQHARLKPL+PGKDREISRMIGDLWNKLKESER VYQEKAMKDKERYR+E
Sbjct: 301 NRSGYNFFFAEQHARLKPLHPGKDREISRMIGDLWNKLKESERIVYQEKAMKDKERYRVE 360

Query: 597 MEDYREKLRTGQIISDAVPLQQRLPEPDLNMVYADKNEETEGGESPQTPDNDTSYVEGDS 656
           MEDYREKLRTGQ+ISDAVPLQQRLPEPDLNMVYADKNEETE GESPQTPDNDTSYVEG+S
Sbjct: 361 MEDYREKLRTGQVISDAVPLQQRLPEPDLNMVYADKNEETEDGESPQTPDNDTSYVEGNS 420

Query: 657 GEYKTEEKEEEEEEDEEEDSEEDASPQGIGNVDVNVFVEEEQCETRTAEEDVRKDSSMVG 716
           GEYK E KEE+EEE EEEDSEEDASP+GIG VDVN  VEEEQC+T TAEEDVRK+SS VG
Sbjct: 421 GEYKMEVKEEDEEE-EEEDSEEDASPKGIGIVDVNALVEEEQCKTGTAEEDVRKESSTVG 472

Query: 717 DDKEVYAGDSVMVEVEAKTEPEPTTAIRED 738
           DDKEVYAG+SVM+EV+AK EPEPTT IRE+
Sbjct: 481 DDKEVYAGESVMMEVDAKEEPEPTTDIREN 472

[Close]

BLAST of CmUC06G115880 vs. TAIR 10
Match: AT1G04880.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 300.8 bits (769), Expect = 3.0e-81
Identity = 205/443 (46.28%), Postives = 267/443 (60.27%), Query Frame = 0


Query: 250 AIEVSSNCVPYPPPQTTYDDIVANPKIFMTSLEKLHSIMGTKFMIPIIGGKELDLHRLFV 309
           ++ +++ CV    P+ TY+ +VA+P++FMTSLE+LHS++GTKFM+PIIGG++LDLH+LFV
Sbjct: 11  SVPMNNVCV---TPEATYEAVVADPRLFMTSLERLHSLLGTKFMVPIIGGRDLDLHKLFV 70

Query: 310 EVTSRGGIEKRVGEMQ----TRTLPKPVRAAIAVSLLPIKDLVYVYNAGRICCYKRE-KM 369
           EVTSRGGI K + E +    T T   P  A  A  +L       + N  +I  ++   ++
Sbjct: 71  EVTSRGGINKILNERRWKEVTATFVFPPTATNASYVLRKYYFSLLNNYEQIYFFRSNGQI 130

Query: 370 ERNSSPCPSAATIPMQGMTSMLPPSDNQAVSQQPRITELPAGVFYGPLEIYSEYKLGSNI 429
             +S   PSA    +QG  ++ P  + QA++  P+           P    +E+  GS  
Sbjct: 131 PPDSMQSPSARPCFIQG--AIRPSQELQALTFTPQ-----------PKINTAEFLGGS-- 190

Query: 430 FERFNAFFTISPSSTSPAGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQ-APSEQPS 489
                              G  V+GVIDGKF+SGYLVTVT+G+E+LKGVLYQ  P    S
Sbjct: 191 -----------------LAGSNVVGVIDGKFESGYLVTVTIGSEQLKGVLYQLLPQNTVS 250

Query: 490 QQQVLQPVGAFAKDGATSTAPN------AHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFA 549
            Q   Q  G        S  P         RRRRRKKSEIKRRDP HPKPNRSGYNFFFA
Sbjct: 251 YQTPQQSHGVLPNTLNISANPQGVAGGVTKRRRRRKKSEIKRRDPDHPKPNRSGYNFFFA 310

Query: 550 EQHARLKPLYPGKDREISRMIGDLWNKLKESERTVYQEKAMKDKERYRIEMEDYREKLRT 609
           EQHARLKPL+PGKDR+ISRMIG+LWNKL E E+ +YQ KAM+DKERYR EMEDYREK + 
Sbjct: 311 EQHARLKPLHPGKDRDISRMIGELWNKLNEDEKLIYQGKAMEDKERYRTEMEDYREKKKN 370

Query: 610 GQIISDAVPLQQRLPEPDLNMVYAD-----KNEETEGGESPQTPDNDTSYVEGDSGEYKT 669
           GQ+IS+AVPLQQRLPE +++M  AD       E+ E G+S            G SGE  +
Sbjct: 371 GQLISNAVPLQQRLPEQNVDMAEADLPIDEVEEDDEEGDS-----------SGSSGE--S 405

Query: 670 EEKEEEEEEDEEEDSEEDASPQG 676
           E  +++  E + E  E   +P G
Sbjct: 431 EPHDDQSIETDPELEEPSLNPSG 405

[Close]

BLAST of CmUC06G115880 vs. TAIR 10
Match: AT1G76110.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 189.1 bits (479), Expect = 1.3e-47
Identity = 128/339 (37.76%), Postives = 176/339 (51.92%), Query Frame = 0


Query: 260 YPPPQTTYDDIVANPKIFMTSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEK 319
           YP P   ++ +V +  +F  +L + HSIM TKFMIP+IGGKELDLH L+VEVT RGG EK
Sbjct: 27  YPEPLALHEVVVKDSSVFWDTLRRFHSIMSTKFMIPVIGGKELDLHVLYVEVTRRGGYEK 86

Query: 320 RVGEMQTRTLPKPVRAAIAVSLLPIKDLVYVYNAGRICCYKREKMERNSSPCPSAATIPM 379
            V E + R +    R +   +        +  N      +  E++   ++  P       
Sbjct: 87  VVVEKKWREVGGVFRFSATTTSASFVLRKHYLN----LLFHYEQVHLFTARGP------- 146

Query: 380 QGMTSMLPPSDNQAVSQQPRITELPAGVFYGPLEIYSEYKLGSNIFERFNAFFTISPSST 439
                +L P         P  ++  A V Y P  I            R++     S  S+
Sbjct: 147 -----LLHPI--ATFHANPSTSKEMALVEYTPPSI------------RYHNTHPPSQGSS 206

Query: 440 SPAGGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAPSEQPSQQQVLQPVGAFAKDGA 499
           S    F  IG I+GKFD GYLV V +G+E L GVLY +    PS         A   +  
Sbjct: 207 S----FTAIGTIEGKFDCGYLVKVKLGSEILNGVLYHSAQPGPSSSPT-----AVLNNAV 266

Query: 500 TSTAPNAHRRRR--RKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRM 559
                   RRRR  +++   +R DP +PKPNRSGYNFFFAE+H +LK LYP K+RE +++
Sbjct: 267 VPYVETGRRRRRLGKRRRSRRREDPNYPKPNRSGYNFFFAEKHCKLKSLYPNKEREFTKL 326

Query: 560 IGDLWNKLKESERTVYQEKAMKDKERYRIEMEDYREKLR 597
           IG+ W+ L   ER VYQ+  +KDKERY+ E+ +YRE LR
Sbjct: 327 IGESWSNLSTEERMVYQDIGLKDKERYQRELNEYRETLR 326

[Close]

BLAST of CmUC06G115880 vs. TAIR 10
Match: AT3G13350.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 173.7 bits (439), Expect = 5.4e-43
Identity = 120/340 (35.29%), Postives = 167/340 (49.12%), Query Frame = 0


Query: 267 YDDIVANPKIFMTSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKRVGEMQT 326
           YDD+V N  +F   L     +      +P +GG  LDLHRLF+EVTSRGGIE+ V + + 
Sbjct: 36  YDDLVRNSALFWEKLRAFLGLTSKTLKVPTVGGNTLDLHRLFIEVTSRGGIERVVKDRKW 95

Query: 327 R----TLPKPVRAAIAVSLLPIKDLVYVYNAGRICCYKREKMERNSSPCPSAATIPMQGM 386
           +        P     A  +L    L +++    +  Y  EK      P  S     +Q  
Sbjct: 96  KEVIGAFSFPTTITSASFVLRKYYLKFLFQLEHV--YYLEK------PVSS-----LQST 155

Query: 387 TSMLPPSDNQAVSQQPRITELPAGVFYGPLEIYSEYKLGSNIFERFNAFFTISPSSTSPA 446
              L    N++ + +  I E                                      P 
Sbjct: 156 DEALKSLANESPNPEEGIDE--------------------------------------PQ 215

Query: 447 GGFPVIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAPSEQPSQQQVLQPVGAFAKDGATST 506
            G+ V G IDGKFDSGYLVT+ +G+++LKGVLY  P      QQ ++   A  +      
Sbjct: 216 VGYEVQGFIDGKFDSGYLVTMKLGSQELKGVLYHIPQTPSQSQQTMETPSAIVQ------ 275

Query: 507 APNAHRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLW 566
              + +RR RKKS++   D   PK +RSGYNFFFAEQ+ARLKP Y G++R I++ IG +W
Sbjct: 276 ---SSQRRHRKKSKLAVVDTQKPKCHRSGYNFFFAEQYARLKPEYHGQERSITKKIGHMW 315

Query: 567 NKLKESERTVYQEKAMKDKERYRIEMEDYREKLRTGQIIS 603
           + L ESE+ VYQ+K +KD ERYRIEM +Y+    +G   S
Sbjct: 336 SNLTESEKQVYQDKGVKDVERYRIEMLEYKSSHESGATAS 315

[Close]

BLAST of CmUC06G115880 vs. TAIR 10
Match: AT1G55650.1 (HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain )

HSP 1 Score: 134.4 bits (337), Expect = 3.7e-31
Identity = 101/338 (29.88%), Postives = 152/338 (44.97%), Query Frame = 0


Query: 267 YDDIVANPKIFMTSLEKLHSIMGTKFMIPIIGGKELDLHRLFVEVTSRGGIEKRVGEMQT 326
           Y DIV NP++F   L   H     KF IPI+GGK LDLHRLF EVTSRGG+EK + + + 
Sbjct: 30  YQDIVRNPELFWEMLRDFHESSDKKFKIPIVGGKSLDLHRLFNEVTSRGGLEKVIKDRR- 89

Query: 327 RTLPKPVRAAIAVSLLPIKDLVYVYNAGRICCYKREKMERNSSPCPSAATIPMQGMTSML 386
                             K+++  +N                +   ++A +  +    ML
Sbjct: 90  -----------------CKEVIDAFNF--------------KTTITNSAFVLRKSYLKML 149

Query: 387 PPSDNQAVSQQPRITELPAGVFYGPLEIYSEYKLGSNIFERFNAFFTISPSSTSPAGGFP 446
              ++                F  PL  + E +    +    +A          P  G  
Sbjct: 150 FEFEH-------------LYYFQAPLSTFWEKEKALKLLIEKSANRDKDSQELKP--GTV 209

Query: 447 VIGVIDGKFDSGYLVTVTVGTEKLKGVLYQAPSEQPSQQQVLQPVGAFAKDGATSTAPNA 506
           + G+IDGKF+SGYL++  VG+EKLKG+LY            + P     K  A S+  ++
Sbjct: 210 ITGIIDGKFESGYLISTKVGSEKLKGMLYH-----------ISPETKRGKKKAKSSQGDS 269

Query: 507 HRRRRRKKSEIKRRDPAHPKPNRSGYNFFFAEQHARLKPLYPGKDREISRMIGDLWNKLK 566
           H+                PK  R+GYNFF AEQ  R+K    G+     +  G++W  L 
Sbjct: 270 HK---------------PPKRQRTGYNFFVAEQSVRIKAENAGQKVSSPKNFGNMWTNLS 294

Query: 567 ESERTVYQEKAMKDKERYRIEMEDYREKL--RTGQIIS 603
           ES+R VY EK+ +D +RY++E+  YR  +  R  +I++
Sbjct: 330 ESDRKVYYEKSREDGKRYKMEILQYRSLMESRVAEIVA 294

[Close]

BLAST of CmUC06G115880 vs. TAIR 10
Match: AT3G28730.1 (high mobility group )

HSP 1 Score: 52.0 bits (123), Expect = 2.4e-06
Identity = 38/129 (29.46%), Postives = 65/129 (50.39%), Query Frame = 0


Query: 465 VGTEKLKGVLYQAPSEQPSQQQVLQPVGAFAKDGATSTAPNAHRRRRRKKSEIKRRDPAH 524
           VG  K K +  + P ++ S  + L P         T  A     +R++ K   K++DP  
Sbjct: 512 VGEIKEKSI-KKEPKKEASSSKGLPP------KRKTVAADEGSSKRKKPK---KKKDPNA 571

Query: 525 PKPNRSGYNFFFAEQHARLKPLYPG-KDREISRMIGDLWNKLKESERTVYQEKAMKDKER 584
           PK   SG+ FF   +   +K  +PG    E+ +++GD W ++   ++  Y+ KA  DK+R
Sbjct: 572 PKRAMSGFMFFSQMERDNIKKEHPGIAFGEVGKVLGDKWRQMSADDKEPYEAKAQVDKQR 630

Query: 585 YRIEMEDYR 593
           Y+ E+ DY+
Sbjct: 632 YKDEISDYK 630

The following BLAST results are available for this feature:

BLAST of CmUC06G115880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876011.1	2.2e-219	75.91	LOW QUALITY PROTEIN: high mobility group B protein 15-like [Benincasa hispida]	[more]
XP_011649091.1	1.3e-208	76.43	high mobility group B protein 15 isoform X2 [Cucumis sativus]	[more]
XP_011649095.1	1.3e-208	76.43	high mobility group B protein 15 isoform X4 [Cucumis sativus] >XP_011649096.1 hi...	[more]
XP_011649092.1	1.3e-208	76.43	high mobility group B protein 15 isoform X3 [Cucumis sativus]	[more]
XP_011649090.1	1.3e-208	76.43	high mobility group B protein 15 isoform X1 [Cucumis sativus]	[more]

BLAST of CmUC06G115880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9MAT6	4.2e-80	46.28	High mobility group B protein 15 OS=Arabidopsis thaliana OX=3702 GN=HMGB15 PE=2 ...	[more]
Q9SGS2	1.8e-46	37.76	High mobility group B protein 9 OS=Arabidopsis thaliana OX=3702 GN=HMGB9 PE=1 SV...	[more]
Q9LTT3	7.7e-42	35.29	High mobility group B protein 10 OS=Arabidopsis thaliana OX=3702 GN=HMGB10 PE=1 ...	[more]
Q9LG02	5.2e-30	29.88	Putative high mobility group B protein 11 OS=Arabidopsis thaliana OX=3702 GN=HMG...	[more]
Q32L31	8.3e-04	28.29	High mobility group protein B3 OS=Bos taurus OX=9913 GN=HMGB3 PE=2 SV=2	[more]

BLAST of CmUC06G115880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LL59	1.0e-206	76.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G138760 PE=4 SV=1	[more]
A0A5A7SQV2	1.5e-197	76.50	High mobility group B protein 15 isoform X5 OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1CAI2	1.5e-194	73.46	high mobility group B protein 15 isoform X1 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1CAX2	6.4e-193	73.08	high mobility group B protein 15 isoform X2 OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1KXI8	3.4e-186	72.94	high mobility group B protein 15-like OS=Cucurbita maxima OX=3661 GN=LOC11149910...	[more]

BLAST of CmUC06G115880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04880.1	3.0e-81	46.28	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT1G76110.1	1.3e-47	37.76	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT3G13350.1	5.4e-43	35.29	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT1G55650.1	3.7e-31	29.88	HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain	[more]
AT3G28730.1	2.4e-06	29.46	high mobility group	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 650..670
None	No IPR available	COILS	Coil	Coil	coord: 574..594
None	No IPR available	SMART	SM01014	ARID_2	coord: 268..365 e-value: 9.4E-5 score: 31.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 625..737
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 505..519
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 651..671
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 496..532
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 686..709
None	No IPR available	PANTHER	PTHR46691:SF3	HIGH MOBILITY GROUP B PROTEIN 15	coord: 225..664
None	No IPR available	PANTHER	PTHR46691	HIGH MOBILITY GROUP B PROTEIN 9	coord: 225..664
None	No IPR available	CDD	cd01390	HMGB-UBF_HMG-box	coord: 525..589 e-value: 6.14834E-21 score: 84.9869
IPR009071	High mobility group box domain	SMART	SM00398	hmgende2	coord: 524..593 e-value: 2.8E-18 score: 76.7
IPR009071	High mobility group box domain	PFAM	PF00505	HMG_box	coord: 525..592 e-value: 1.2E-13 score: 51.3
IPR009071	High mobility group box domain	PROSITE	PS50118	HMG_BOX_2	coord: 525..592 score: 15.294962
IPR001606	ARID DNA-binding domain	SMART	SM00501	bright_3	coord: 272..350 e-value: 0.0056 score: 11.5
IPR001606	ARID DNA-binding domain	PFAM	PF01388	ARID	coord: 276..319 e-value: 4.0E-7 score: 30.6
IPR001606	ARID DNA-binding domain	PROSITE	PS51011	ARID	coord: 271..364 score: 10.819307
IPR036910	High mobility group box domain superfamily	GENE3D	1.10.30.10	High mobility group box domain	coord: 509..604 e-value: 2.1E-20 score: 74.9
IPR036910	High mobility group box domain superfamily	SUPERFAMILY	47095	HMG-box	coord: 518..597
IPR036431	ARID DNA-binding domain superfamily	GENE3D	1.10.150.60		coord: 265..325 e-value: 4.3E-10 score: 41.1
IPR036431	ARID DNA-binding domain superfamily	SUPERFAMILY	46774	ARID-like	coord: 268..319

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC06G115880.1	CmUC06G115880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019760	glucosinolate metabolic process
biological_process	GO:0009846	pollen germination
biological_process	GO:0009860	pollen tube growth
cellular_component	GO:0005634	nucleus
cellular_component	GO:0090406	pollen tube
molecular_function	GO:0000400	four-way junction DNA binding
molecular_function	GO:0000976	transcription cis-regulatory region binding
molecular_function	GO:0003677	DNA binding