CmUC06G115680 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC06G115680
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr06: 9076464 .. 9078168 (+)
RNA-Seq Expression	CmUC06G115680
Synteny	CmUC06G115680

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAACTTTGAAACACACCGCAAAGCTTTCTAATTTCTTTAAATTTCAATTAGCAAAATCCAATAGTAATGGTGCTTTGGGCCAAAAAGCCTTCATCTCCTCTTACCCTACACTTTCAAAAGTCAGTATATACTTATCCATATATTTTCTTATTCTTCTTCTTTATCGTTCTTTCATCAATCAATTTGTGCTTTCAGATTTGTTATCAATATTAGTGAAAATCATCTCTTAATTTTATTTTCTTTTGTATTTTGATTTTCTGGGTTTTAGTGATTTTCTTATTGTGATGCCTTTGGCTATAGTGATTCTTTCCTTAGGTCGAATTAATATTTTTTTTTTTTTTTTTTTTTTTTAAAAACTTGTGAATGCTTTATCTTGGATTGCAAAATTTTATTTTCTTTGTCTTTTCATTCTTCTTGGACCAAATGAGGTTTGATTAAATAAAAAGATATGTGTAGATATGTGTTTAAATCATATGAATTTTTGGATGTATTGAGAGTTTTGTAATTGATAAGAAAAATGTTTGGAAATGGCAGTCAAAGAAGGATGAAGAGACAGTGGATGCATGTATAAAGACTAAAGAAGCAGCAGAATCAGTGAAGGAATGTGCAAAAGAAGTGAGAGAAACAACTAAATTCCTTAGAGACACTGTAGCTTCCACTGCCAAATGTGTAAGCCAATTAATTCAAGATTCAATCTCCCCTTTCACTTATATTTATTTCATTCTATTTAAATTGAAATATCAATGAATCTTATAAATTAAAAAACCTTCCAAAAGGGTTTGGTTTAAAGTATGGGTTCCATCTCAAAATCAATTGACAAATGGGAGAAGAAATCTATTTATGTTAAAAAGTGATTTGAACTAGTAATTTAGTGGGGGTTAAATAAAATTAGTACTATTTATTCAAAATTAAATAAATGTTTAATTTTCATTTTAAAACACAGTTTTTACACTATTAAGATTGATTCTAATGATTTTGAAAATGAGAATAGTGATTTTAAACAATTCCCAAACATGCTCTCATCATTTTTTTTTTCATCACACCTGTAAAAGTGATTTTGATTTTGAATATTCATTAATGTTTGATTTTTATAATGGTTTTAGAATCATCAAATTACTAAATTAGATCTCTCAAATAATGGTTATTATCATTGAGATACCTCACAATCCTTATCAAATACATGGGTTGACCCTTTTGGAGGGAATTTCATGTCTATCAGATATGGAATTAGAGACAACAAATCTAAAGGTAGTTAAAAACTAACATTAATAAACTAACCAAAGAGGTATCTTCAAGGGACATTATGAAGATTACAAATATGTTTTACCCACATTTGTTCGTTTTCTTTATTTGTAAGTTCAACCAATGCATAACTGAGATATGAAACTATGGACACTGGAGAGATGATGATTTGATGATGATTTGTGTCTTAAATATCCATTCACTTATGCATTAGTTTGTCTGTTTTAGACTTTTTTGGTTGGTTGGGATTTGACATTTTGAGAAATTTAATTGGAGGTATGATGTGATTTATAGGTATCAAAAATGACAAAGGAAGTGACAGAAAAGGTAGCTGATACAGCAGAAAAGATAACAAAAACAGCAGAAAACATAACAGAGAAAGCAAAGGATACAGTTACAGGAGCATTGGGAACGGCAAAGAACACTACTGAAATTATCAAAGATTTCATTGATAAGTAA

mRNA sequence

ATGTCAACTTTGAAACACACCGCAAAGCTTTCTAATTTCTTTAAATTTCAATTAGCAAAATCCAATAGTAATGGTGCTTTGGGCCAAAAAGCCTTCATCTCCTCTTACCCTACACTTTCAAAATCAAAGAAGGATGAAGAGACAGTGGATGCATGTATAAAGACTAAAGAAGCAGCAGAATCAGTGAAGGAATGTGCAAAAGAAGTGAGAGAAACAACTAAATTCCTTAGAGACACTGTAGCTTCCACTGCCAAATGTGTATCAAAAATGACAAAGGAAGTGACAGAAAAGGTAGCTGATACAGCAGAAAAGATAACAAAAACAGCAGAAAACATAACAGAGAAAGCAAAGGATACAGTTACAGGAGCATTGGGAACGGCAAAGAACACTACTGAAATTATCAAAGATTTCATTGATAAGTAA

Coding sequence (CDS)

ATGTCAACTTTGAAACACACCGCAAAGCTTTCTAATTTCTTTAAATTTCAATTAGCAAAATCCAATAGTAATGGTGCTTTGGGCCAAAAAGCCTTCATCTCCTCTTACCCTACACTTTCAAAATCAAAGAAGGATGAAGAGACAGTGGATGCATGTATAAAGACTAAAGAAGCAGCAGAATCAGTGAAGGAATGTGCAAAAGAAGTGAGAGAAACAACTAAATTCCTTAGAGACACTGTAGCTTCCACTGCCAAATGTGTATCAAAAATGACAAAGGAAGTGACAGAAAAGGTAGCTGATACAGCAGAAAAGATAACAAAAACAGCAGAAAACATAACAGAGAAAGCAAAGGATACAGTTACAGGAGCATTGGGAACGGCAAAGAACACTACTGAAATTATCAAAGATTTCATTGATAAGTAA

Protein sequence

MSTLKHTAKLSNFFKFQLAKSNSNGALGQKAFISSYPTLSKSKKDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVADTAEKITKTAENITEKAKDTVTGALGTAKNTTEIIKDFIDK

Homology

[Close]

BLAST of CmUC06G115680 vs. NCBI nr
Match: XP_022138632.1 (uncharacterized protein LOC111009748 [Momordica charantia])

HSP 1 Score: 193.0 bits (489), Expect = 1.8e-45
Identity = 112/141 (79.43%), Postives = 123/141 (87.23%), Query Frame = 0


Query: 1   MSTLKHTAKLSNFFKFQLAKSNSNGALGQKAFISSYPTLSKSK-KDEETVDACIKTKEAA 60
           MSTLKHTAKLS +    L    SN + G KAFISSYPTLSKSK  DEETVDAC+KTKEAA
Sbjct: 1   MSTLKHTAKLSKY----LFTPKSNASFGHKAFISSYPTLSKSKTTDEETVDACVKTKEAA 60

Query: 61  ESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVADTAEKITKTAENITEKAKDT 120
           E+VKE A+EVRET++FL+DTVASTAKCVSKMTKEVT KV++TAEKITKTAENITEKAKDT
Sbjct: 61  EAVKESAREVRETSEFLKDTVASTAKCVSKMTKEVTGKVSETAEKITKTAENITEKAKDT 120

Query: 121 VTGALGTAKNTTEIIKDFIDK 141
           V+GA GTAKNTT IIKDFIDK
Sbjct: 121 VSGAWGTAKNTTGIIKDFIDK 137

[Close]

BLAST of CmUC06G115680 vs. NCBI nr
Match: XP_015887495.1 (uncharacterized protein LOC107422546 [Ziziphus jujuba])

HSP 1 Score: 116.3 bits (290), Expect = 2.1e-22
Identity = 78/137 (56.93%), Postives = 95/137 (69.34%), Query Frame = 0


Query: 1   MSTLKHTAKLSNFFKFQLAKSNSNGALGQKAFISSYP-TLSKSKKDEETVDACIKTKEAA 60
           MSTLK TAK+S FF     K NSN     KA +++    L   KKD++  D C KTKEAA
Sbjct: 1   MSTLKLTAKISKFFPKTTPKCNSN----HKALLTTATRPLQFFKKDKDVADTCKKTKEAA 60

Query: 61  ESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVADTAEKITKTAENITEKAKDT 120
           E+V++ AKEVRET +F+RDTV +TAK V+KMTKE T+KV++       TA N TEKAK T
Sbjct: 61  EAVEQGAKEVRETCEFMRDTVETTAKKVTKMTKEATDKVSE-------TAGNFTEKAKGT 120

Query: 121 VTGALGTAKNTTEIIKD 137
           V+GALG AKN TEIIKD
Sbjct: 121 VSGALGMAKNATEIIKD 126

[Close]

BLAST of CmUC06G115680 vs. NCBI nr
Match: PON63791.1 (hypothetical protein PanWU01x14_129470 [Parasponia andersonii])

HSP 1 Score: 108.6 bits (270), Expect = 4.4e-20
Identity = 70/138 (50.72%), Postives = 97/138 (70.29%), Query Frame = 0


Query: 2   STLKHTAKLSNFFKFQLAKSNSNGALGQKAFI--SSYPTLSKSKKDEETVDACIKTKEAA 61
           S+L  + KLS F    LA + S  A   +AF+  ++ P  S+SKK++E +DAC K KEAA
Sbjct: 3   SSLIRSVKLSTF----LAAAISQSAYRSRAFVTAATRPLQSESKKEKEEIDACEKAKEAA 62

Query: 62  ESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVADTAEKITKTAENITEKAKDT 121
           E+VK  AKEVRET +F+RDTV +TAK VSK+TKE TEKV++       TA++I +KAK +
Sbjct: 63  EAVKSGAKEVRETCEFIRDTVETTAKTVSKLTKEATEKVSE-------TADSIKDKAKGS 122

Query: 122 VTGALGTAKNTTEIIKDF 138
           V+GALG A+  T+++KDF
Sbjct: 123 VSGALGIAQKATDVVKDF 129

[Close]

BLAST of CmUC06G115680 vs. NCBI nr
Match: PON66099.1 (hypothetical protein TorRG33x02_269090 [Trema orientale])

HSP 1 Score: 105.9 bits (263), Expect = 2.8e-19
Identity = 68/136 (50.00%), Postives = 95/136 (69.85%), Query Frame = 0


Query: 2   STLKHTAKLSNFFKFQLAKSNSNGALGQKAFISSYPTLSKSKKDEETVDACIKTKEAAES 61
           S+LK + KLS F    +++S S       A  ++ P  S+SKK++E +DAC K KEAAE+
Sbjct: 3   SSLKLSVKLSTFLAAAISQSASRSRALFTA--ATRPLQSESKKEKEEIDACEKAKEAAEA 62

Query: 62  VKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVADTAEKITKTAENITEKAKDTVT 121
           VK  AKEVRET +F+RDTV +TAK VSK+TK+ TEKV++       TAE+I +KAK +V+
Sbjct: 63  VKSGAKEVRETCEFIRDTVETTAKTVSKVTKDATEKVSE-------TAESIKDKAKGSVS 122

Query: 122 GALGTAKNTTEIIKDF 138
           GALG A+  T+++KDF
Sbjct: 123 GALGIAQKATDVVKDF 129

[Close]

BLAST of CmUC06G115680 vs. NCBI nr
Match: RXH78485.1 (hypothetical protein DVH24_002003 [Malus domestica])

HSP 1 Score: 104.8 bits (260), Expect = 6.3e-19
Identity = 69/140 (49.29%), Postives = 93/140 (66.43%), Query Frame = 0


Query: 1   MSTLKHTAKLSNFFKFQLAKSNSNG----ALGQKAFISSYPTLSKSKKDEETVDACIKTK 60
           MS++K   KLS +    L K+ +N     +L  + F+       +SKK+++  DAC KTK
Sbjct: 1   MSSMKLVTKLSTYL---LGKTITNNGVMTSLSTRGFVIVPTRPMQSKKEDDEADACAKTK 60

Query: 61  EAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVADTAEKITKTAENITEKA 120
           EAA++VK+ AKEVR+T +F+RDTV +TAK ++KM KE TEKV       T+TAE +T K 
Sbjct: 61  EAADAVKDGAKEVRQTCEFMRDTVETTAKSMNKMAKETTEKV-------TETAETLTNKT 120

Query: 121 KDTVTGALGTAKNTTEIIKD 137
           K TV+GA G AKNTTEIIKD
Sbjct: 121 KGTVSGAWGVAKNTTEIIKD 130

[Close]

BLAST of CmUC06G115680 vs. ExPASy TrEMBL
Match: A0A6J1CBN9 (uncharacterized protein LOC111009748 OS=Momordica charantia OX=3673 GN=LOC111009748 PE=4 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 8.6e-46
Identity = 112/141 (79.43%), Postives = 123/141 (87.23%), Query Frame = 0


Query: 1   MSTLKHTAKLSNFFKFQLAKSNSNGALGQKAFISSYPTLSKSK-KDEETVDACIKTKEAA 60
           MSTLKHTAKLS +    L    SN + G KAFISSYPTLSKSK  DEETVDAC+KTKEAA
Sbjct: 1   MSTLKHTAKLSKY----LFTPKSNASFGHKAFISSYPTLSKSKTTDEETVDACVKTKEAA 60

Query: 61  ESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVADTAEKITKTAENITEKAKDT 120
           E+VKE A+EVRET++FL+DTVASTAKCVSKMTKEVT KV++TAEKITKTAENITEKAKDT
Sbjct: 61  EAVKESAREVRETSEFLKDTVASTAKCVSKMTKEVTGKVSETAEKITKTAENITEKAKDT 120

Query: 121 VTGALGTAKNTTEIIKDFIDK 141
           V+GA GTAKNTT IIKDFIDK
Sbjct: 121 VSGAWGTAKNTTGIIKDFIDK 137

[Close]

BLAST of CmUC06G115680 vs. ExPASy TrEMBL
Match: A0A6P4A219 (uncharacterized protein LOC107422546 OS=Ziziphus jujuba OX=326968 GN=LOC107422546 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 1.0e-22
Identity = 78/137 (56.93%), Postives = 95/137 (69.34%), Query Frame = 0


Query: 1   MSTLKHTAKLSNFFKFQLAKSNSNGALGQKAFISSYP-TLSKSKKDEETVDACIKTKEAA 60
           MSTLK TAK+S FF     K NSN     KA +++    L   KKD++  D C KTKEAA
Sbjct: 1   MSTLKLTAKISKFFPKTTPKCNSN----HKALLTTATRPLQFFKKDKDVADTCKKTKEAA 60

Query: 61  ESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVADTAEKITKTAENITEKAKDT 120
           E+V++ AKEVRET +F+RDTV +TAK V+KMTKE T+KV++       TA N TEKAK T
Sbjct: 61  EAVEQGAKEVRETCEFMRDTVETTAKKVTKMTKEATDKVSE-------TAGNFTEKAKGT 120

Query: 121 VTGALGTAKNTTEIIKD 137
           V+GALG AKN TEIIKD
Sbjct: 121 VSGALGMAKNATEIIKD 126

[Close]

BLAST of CmUC06G115680 vs. ExPASy TrEMBL
Match: A0A2P5CRY2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_129470 PE=4 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 2.1e-20
Identity = 70/138 (50.72%), Postives = 97/138 (70.29%), Query Frame = 0


Query: 2   STLKHTAKLSNFFKFQLAKSNSNGALGQKAFI--SSYPTLSKSKKDEETVDACIKTKEAA 61
           S+L  + KLS F    LA + S  A   +AF+  ++ P  S+SKK++E +DAC K KEAA
Sbjct: 3   SSLIRSVKLSTF----LAAAISQSAYRSRAFVTAATRPLQSESKKEKEEIDACEKAKEAA 62

Query: 62  ESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVADTAEKITKTAENITEKAKDT 121
           E+VK  AKEVRET +F+RDTV +TAK VSK+TKE TEKV++       TA++I +KAK +
Sbjct: 63  EAVKSGAKEVRETCEFIRDTVETTAKTVSKLTKEATEKVSE-------TADSIKDKAKGS 122

Query: 122 VTGALGTAKNTTEIIKDF 138
           V+GALG A+  T+++KDF
Sbjct: 123 VSGALGIAQKATDVVKDF 129

[Close]

BLAST of CmUC06G115680 vs. ExPASy TrEMBL
Match: A0A2P5CYH7 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_269090 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.4e-19
Identity = 68/136 (50.00%), Postives = 95/136 (69.85%), Query Frame = 0


Query: 2   STLKHTAKLSNFFKFQLAKSNSNGALGQKAFISSYPTLSKSKKDEETVDACIKTKEAAES 61
           S+LK + KLS F    +++S S       A  ++ P  S+SKK++E +DAC K KEAAE+
Sbjct: 3   SSLKLSVKLSTFLAAAISQSASRSRALFTA--ATRPLQSESKKEKEEIDACEKAKEAAEA 62

Query: 62  VKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVADTAEKITKTAENITEKAKDTVT 121
           VK  AKEVRET +F+RDTV +TAK VSK+TK+ TEKV++       TAE+I +KAK +V+
Sbjct: 63  VKSGAKEVRETCEFIRDTVETTAKTVSKVTKDATEKVSE-------TAESIKDKAKGSVS 122

Query: 122 GALGTAKNTTEIIKDF 138
           GALG A+  T+++KDF
Sbjct: 123 GALGIAQKATDVVKDF 129

[Close]

BLAST of CmUC06G115680 vs. ExPASy TrEMBL
Match: A0A498I8V5 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_002003 PE=4 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 3.1e-19
Identity = 69/140 (49.29%), Postives = 93/140 (66.43%), Query Frame = 0


Query: 1   MSTLKHTAKLSNFFKFQLAKSNSNG----ALGQKAFISSYPTLSKSKKDEETVDACIKTK 60
           MS++K   KLS +    L K+ +N     +L  + F+       +SKK+++  DAC KTK
Sbjct: 1   MSSMKLVTKLSTYL---LGKTITNNGVMTSLSTRGFVIVPTRPMQSKKEDDEADACAKTK 60

Query: 61  EAAESVKECAKEVRETTKFLRDTVASTAKCVSKMTKEVTEKVADTAEKITKTAENITEKA 120
           EAA++VK+ AKEVR+T +F+RDTV +TAK ++KM KE TEKV       T+TAE +T K 
Sbjct: 61  EAADAVKDGAKEVRQTCEFMRDTVETTAKSMNKMAKETTEKV-------TETAETLTNKT 120

Query: 121 KDTVTGALGTAKNTTEIIKD 137
           K TV+GA G AKNTTEIIKD
Sbjct: 121 KGTVSGAWGVAKNTTEIIKD 130

[Close]

BLAST of CmUC06G115680 vs. TAIR 10
Match: AT1G04670.1 (unknown protein; Has 40 Blast hits to 40 proteins in 14 species: Archae - 2; Bacteria - 5; Metazoa - 1; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 87.0 bits (214), Expect = 1.3e-17
Identity = 55/109 (50.46%), Postives = 78/109 (71.56%), Query Frame = 0


Query: 30  KAFISSYPTLSKSKKDEETVDACIKTKEAAESVKECAKEVRETTKFLRDTVASTAKCVSK 89
           + F+S+ P   + K++ E    C K KEAAE+VKE AK+V+ETT++++D  ++TA  V+K
Sbjct: 24  RTFVSASPRPLQGKEEAE---QCQKVKEAAEAVKEGAKQVKETTEYIQDVASTTAGRVTK 83

Query: 90  MTKEVTEKVADTAEKITKTAENITEKAKDTVTGALGTAKNTTEIIKDFI 139
           MTK+VTEKV       T+T + ITEKAK +V+G LGTAKN T+IIK+ I
Sbjct: 84  MTKDVTEKV-------TETTDTITEKAKGSVSGVLGTAKNATDIIKNKI 122

The following BLAST results are available for this feature:

BLAST of CmUC06G115680 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138632.1	1.8e-45	79.43	uncharacterized protein LOC111009748 [Momordica charantia]	[more]
XP_015887495.1	2.1e-22	56.93	uncharacterized protein LOC107422546 [Ziziphus jujuba]	[more]
PON63791.1	4.4e-20	50.72	hypothetical protein PanWU01x14_129470 [Parasponia andersonii]	[more]
PON66099.1	2.8e-19	50.00	hypothetical protein TorRG33x02_269090 [Trema orientale]	[more]
RXH78485.1	6.3e-19	49.29	hypothetical protein DVH24_002003 [Malus domestica]	[more]

BLAST of CmUC06G115680 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC06G115680 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CBN9	8.6e-46	79.43	uncharacterized protein LOC111009748 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A6P4A219	1.0e-22	56.93	uncharacterized protein LOC107422546 OS=Ziziphus jujuba OX=326968 GN=LOC10742254...	[more]
A0A2P5CRY2	2.1e-20	50.72	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_129470 PE...	[more]
A0A2P5CYH7	1.4e-19	50.00	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_269090 PE=4 SV...	[more]
A0A498I8V5	3.1e-19	49.29	Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_002003 PE=4 SV=1	[more]

BLAST of CmUC06G115680 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04670.1	1.3e-17	50.46	unknown protein; Has 40 Blast hits to 40 proteins in 14 species: Archae - 2; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.20.120.20	Apolipoprotein	coord: 36..140 e-value: 7.2E-6 score: 27.9

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC06G115680.1	CmUC06G115680.1	mRNA