Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGGCCGCTCCGCGTCGTCTTGGGCACATGGCGACAGCTTGGCAACTCCACTGGGGAGTTGAGGCTTTGCCTCGAGAGTTTGGCCTTTGTTTTTTTTTATCTTTTTATATATATTTTAGTTTTATTCTTTTTATTTATTTTTTTAACGTTATTTGCATATTATTTGTGTGCTTTATTTTTGTTATTTCACACACAATCACGAGCCTCCTACCCGGGCTTTACCGTATAGGATTAGAAATGAGGATGGAATAGTGTTGACCTTCGAGGGGCTTATGCTCCCGTGCGGGCACATGAAAAACCTCACTCGATTTGGTCACAAAATATCGTATGAGTTTTATGATCAAATTGGGGACCTTTACCCTCTAAGACCTATGTTTAACCTCACTTATTTAATCTTCTTATTTTATTAATTTAATCGTTTTGTTATTTTTGTTATCTTCACACACTATCACGAGCCCCCTACCCGGGTGGTACCCGTTTAAAGTCTAGATTTGAGAGTAGAGTAGTGTTGACCCTCGAGGAGCTCATGCTTCCGTATGGGCACATGAAAAGTTCTCGCTCAATATGGTTGTGTGATCATGTTGATTATACGCCATTTTGGGGGCCTTGTCATTTAGGGTGTCAAAACTAGCCTCACTATTCTCTTTGAGCTTCCTTTCACTTGTTTGTTTATTCCTTGCATATTGCATTTTACATATAAGCTAGCATCTAGACTCATATTTTATTACACTCAATCTTAGGATGGTAGACACTCATGCACCTGGGGTATTTGCCCATACCATCCCTAGCGAAGACTCGTGGGAAGGTGTGTCACAGTGGTCAGAGCAGCTTCAACAAGAGTCAAGATTTGCTTGGCCTAGAAGATCTGAGATTTCACTTCCACAATTTCCTCGATTAGAGTTTGTCGAAAATAATCTAGAAGATCTGAAGGAATTGTGGGAAAATTTAGCCTCGGAGCATAGAACTGAATTTGCAAGAGCATATGGGAACATCGCAGATCTGATGTATGCAAACATCAGCACACAAGTACTGCAAGCCTTGGTACACTTTTGGGACCCTATGTTGAAATGTTTCACATTCAGTATGTTTGACCTAACTCCCACTATAGAGGAATATCGAGCTCTCATCGGCATACTACCTTGCATAGGAGGAAAGGTCTACGTCTATGATCGGAGGCGAACTCTACAAAGATCATTGTCCAAGTTCTTGGGTAATATTCATGCATCTGATATAAAAAAGCAGATGAAGACAAAAGGAGGGAGAAGTTGTATCCCTATTGATTATTTAATCAGCCTTACGCGTGCATTTTTGCCTGGGAGGAAAGGTCTGTCTCTTTTGGCATTATGTATTTACGGTACGGTTATCTTTCCAAGAATTAAGGGGTATGCAGAAGAAGAAGTTATTAAACTTTTCGTTGGAATAAAGAGAGCTGTGAACCCCATTATCCCAATCATGGCGAAAACCTTTAGATCATTGAGCTATTGCCGAGTCCAAGGCAAGGGGAAGTTCTTCAGCTGCGCTCCAATGCTTTTTATATGGATTTCTAGCCATTTGAAGTATCCAAGCGAGTTTGGGTATCCACAAATAAAGTTTAGCAGTCCATGGAACAGCATGAGAAACACCATTAGAGATTTCAATTCGGCACACTAGAATCCAAACATTCTGAATCACGAAACTTGGATACATTTCTTAGGCCATCTAACATCAGATGAAATAATATGGAGGGCGTCGTGGGTACCCACAAACTCTTTGACATATCGCTGTGGGCAATTACCATTCGTCCCGTTACTAGGTTTATGGGGAGGAATCGCTTATTCTCCCCTGTTAGTATTACGACAATTGTGGTCAAAGCAATTTACTCCATTTGTCCAAGGCTTAGAAGACTGGAATTTCTCGTACGAGTCTAATGAGAAAAGTGCCAAGGTATGTGAAGCAGTGGAAGCATGGAAATTTGTCCGAAGCATGAAGAGCCTAAGACACTGCGAGGGTACTACAGAACAATATGACAATTGGAGAGCAACTAGGGTAGGAATTAAAATCGCACAAGAGTCAACGAATCCGAGCATGGAAATTTTTCGAAAGAATGAGAATCAAGAAAAAGATTTGGAGCGGTTAAAGCAGATGAATCAAGTCTTGGCAACAGAAAATGAAGAGTTGAGGGTAGAGGTTAGGAGATTGGTTCAACAAGCTACTAGCGCCCAGAGGCAGTTGGAGGAAGCAACACGTTGTCTCTAA
mRNA sequence
ATGTCGGCCGCTCCGCGTCGTCTTGGGCACATGGCGACAGCTTGGCAACTCCACTGGGGAGTTGAGGCTTTGCCTCGAGAGATGGTAGACACTCATGCACCTGGGGTATTTGCCCATACCATCCCTAGCGAAGACTCGTGGGAAGGTGTGTCACAGTGGTCAGAGCAGCTTCAACAAGAGTCAAGATTTGCTTGGCCTAGAAGATCTGAGATTTCACTTCCACAATTTCCTCGATTAGAGTTTGTCGAAAATAATCTAGAAGATCTGAAGGAATTGTGGGAAAATTTAGCCTCGGAGCATAGAACTGAATTTGCAAGAGCATATGGGAACATCGCAGATCTGATGTATGCAAACATCAGCACACAAGTACTGCAAGCCTTGGTACACTTTTGGGACCCTATGTTGAAATGTTTCACATTCAGTATGTTTGACCTAACTCCCACTATAGAGGAATATCGAGCTCTCATCGGCATACTACCTTGCATAGGAGGAAAGGTCTACGTCTATGATCGGAGGCGAACTCTACAAAGATCATTGTCCAAGTTCTTGGGTAATATTCATGCATCTGATATAAAAAAGCAGATGAAGACAAAAGGAGGGAGAAGTTGTATCCCTATTGATTATTTAATCAGCCTTACGCGTGCATTTTTGCCTGGGAGGAAAGGTCTGTCTCTTTTGGCATTATGTATTTACGGTACGGTTATCTTTCCAAGAATTAAGGGGTATGCAGAAGAAGAAGTTATTAAACTTTTCGTTGGAATAAAGAGAGCTGTGAACCCCATTATCCCAATCATGGCGAAAACCTTTAGATCATTGAGCTATTGCCGAGTCCAAGGCAAGGGGAAGTTCTTCAGCTGCGCTCCAATGCTTTTTATATGGATTTCTAGCCATTTGAAGTATCCAAGCGAGTTTGGGTATCCACAAATAAAGTTTAGCAGCCATCTAACATCAGATGAAATAATATGGAGGGCGTCGTGGGTACCCACAAACTCTTTGACATATCGCTGTGGGCAATTACCATTCGTCCCGTTACTAGGTTTATGGGGAGGAATCGCTTATTCTCCCCTGTTAGTATTACGACAATTGTGGTCAAAGCAATTTACTCCATTTGTCCAAGGCTTAGAAGACTGGAATTTCTCGTACGAGTCTAATGAGAAAAGTGCCAAGGTATGTGAAGCAGTGGAAGCATGGAAATTTGTCCGAAGCATGAAGAGCCTAAGACACTGCGAGGGTACTACAGAACAATATGACAATTGGAGAGCAACTAGGGTAGGAATTAAAATCGCACAAGAGTCAACGAATCCGAGCATGGAAATTTTTCGAAAGAATGAGAATCAAGAAAAAGATTTGGAGCGGTTAAAGCAGATGAATCAAGTCTTGGCAACAGAAAATGAAGAGTTGAGGGTAGAGGTTAGGAGATTGGTTCAACAAGCTACTAGCGCCCAGAGGCAGTTGGAGGAAGCAACACGTTGTCTCTAA
Coding sequence (CDS)
ATGTCGGCCGCTCCGCGTCGTCTTGGGCACATGGCGACAGCTTGGCAACTCCACTGGGGAGTTGAGGCTTTGCCTCGAGAGATGGTAGACACTCATGCACCTGGGGTATTTGCCCATACCATCCCTAGCGAAGACTCGTGGGAAGGTGTGTCACAGTGGTCAGAGCAGCTTCAACAAGAGTCAAGATTTGCTTGGCCTAGAAGATCTGAGATTTCACTTCCACAATTTCCTCGATTAGAGTTTGTCGAAAATAATCTAGAAGATCTGAAGGAATTGTGGGAAAATTTAGCCTCGGAGCATAGAACTGAATTTGCAAGAGCATATGGGAACATCGCAGATCTGATGTATGCAAACATCAGCACACAAGTACTGCAAGCCTTGGTACACTTTTGGGACCCTATGTTGAAATGTTTCACATTCAGTATGTTTGACCTAACTCCCACTATAGAGGAATATCGAGCTCTCATCGGCATACTACCTTGCATAGGAGGAAAGGTCTACGTCTATGATCGGAGGCGAACTCTACAAAGATCATTGTCCAAGTTCTTGGGTAATATTCATGCATCTGATATAAAAAAGCAGATGAAGACAAAAGGAGGGAGAAGTTGTATCCCTATTGATTATTTAATCAGCCTTACGCGTGCATTTTTGCCTGGGAGGAAAGGTCTGTCTCTTTTGGCATTATGTATTTACGGTACGGTTATCTTTCCAAGAATTAAGGGGTATGCAGAAGAAGAAGTTATTAAACTTTTCGTTGGAATAAAGAGAGCTGTGAACCCCATTATCCCAATCATGGCGAAAACCTTTAGATCATTGAGCTATTGCCGAGTCCAAGGCAAGGGGAAGTTCTTCAGCTGCGCTCCAATGCTTTTTATATGGATTTCTAGCCATTTGAAGTATCCAAGCGAGTTTGGGTATCCACAAATAAAGTTTAGCAGCCATCTAACATCAGATGAAATAATATGGAGGGCGTCGTGGGTACCCACAAACTCTTTGACATATCGCTGTGGGCAATTACCATTCGTCCCGTTACTAGGTTTATGGGGAGGAATCGCTTATTCTCCCCTGTTAGTATTACGACAATTGTGGTCAAAGCAATTTACTCCATTTGTCCAAGGCTTAGAAGACTGGAATTTCTCGTACGAGTCTAATGAGAAAAGTGCCAAGGTATGTGAAGCAGTGGAAGCATGGAAATTTGTCCGAAGCATGAAGAGCCTAAGACACTGCGAGGGTACTACAGAACAATATGACAATTGGAGAGCAACTAGGGTAGGAATTAAAATCGCACAAGAGTCAACGAATCCGAGCATGGAAATTTTTCGAAAGAATGAGAATCAAGAAAAAGATTTGGAGCGGTTAAAGCAGATGAATCAAGTCTTGGCAACAGAAAATGAAGAGTTGAGGGTAGAGGTTAGGAGATTGGTTCAACAAGCTACTAGCGCCCAGAGGCAGTTGGAGGAAGCAACACGTTGTCTCTAA
Protein sequence
MSAAPRRLGHMATAWQLHWGVEALPREMVDTHAPGVFAHTIPSEDSWEGVSQWSEQLQQESRFAWPRRSEISLPQFPRLEFVENNLEDLKELWENLASEHRTEFARAYGNIADLMYANISTQVLQALVHFWDPMLKCFTFSMFDLTPTIEEYRALIGILPCIGGKVYVYDRRRTLQRSLSKFLGNIHASDIKKQMKTKGGRSCIPIDYLISLTRAFLPGRKGLSLLALCIYGTVIFPRIKGYAEEEVIKLFVGIKRAVNPIIPIMAKTFRSLSYCRVQGKGKFFSCAPMLFIWISSHLKYPSEFGYPQIKFSSHLTSDEIIWRASWVPTNSLTYRCGQLPFVPLLGLWGGIAYSPLLVLRQLWSKQFTPFVQGLEDWNFSYESNEKSAKVCEAVEAWKFVRSMKSLRHCEGTTEQYDNWRATRVGIKIAQESTNPSMEIFRKNENQEKDLERLKQMNQVLATENEELRVEVRRLVQQATSAQRQLEEATRCL
Homology
BLAST of CmUC06G115200 vs. NCBI nr
Match:
KAA0033221.1 (uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa])
HSP 1 Score: 589.3 bits (1518), Expect = 3.0e-164
Identity = 299/470 (63.62%), Postives = 363/470 (77.23%), Query Frame = 0
Query: 28 MVDTHAPGVFAHTIPSEDSWEGVSQWSEQLQQESRFAWPRRSEISLPQFPRLEFVENNLE 87
MVDTHA V A IP+EDSWE VSQWSE Q ES +WP++ E+ LP+ +L F+ NNLE
Sbjct: 1 MVDTHASEVVALLIPNEDSWENVSQWSEHFQLESGLSWPKKLEVPLPKTCQLGFINNNLE 60
Query: 88 DLKELWENLASEHRTEFARAYGNIADLMYANISTQVLQALVHFWDPMLKCFTFSMFDLTP 147
+LK LWE+L E R +F +AYG+I DL+Y I+T LQAL HFWDP+LKCFTF+ FDLTP
Sbjct: 61 ELKSLWESLMPEQRAKFIKAYGSIGDLLYTTINTSTLQALSHFWDPVLKCFTFNTFDLTP 120
Query: 148 TIEEYRALIGILPCIGGKVYVYDRRRTLQRSLSKFLGNIHASDIKKQMKTKGGRSCIPID 207
TIEEY+ALI + G K+Y+Y R+ TLQRSLSKF+G+IHAS++KKQMKTK GR+CIPI+
Sbjct: 121 TIEEYQALISLPVDRGNKLYIYHRKLTLQRSLSKFMGDIHASELKKQMKTKEGRNCIPIN 180
Query: 208 YLISLTRAFLPGRKGLSLLALCIYGTVIFPRIKGYAEEEVIKLFVGIKRAVNPIIPIMAK 267
YLI+L R L G+KGLSL+ALCIYGTVIFPRIKGY EEEV+K+FVGI+R VNP+IPIMA+
Sbjct: 181 YLINLARGCLLGKKGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPVIPIMAE 240
Query: 268 TFRSLSYCRVQGKGKFFSCAPMLFIWISSHLKYPSEFGYPQIKFSSHLTSDEIIWR---- 327
TFRSL++CR+QGKGKFFSCAPMLFIWISSHL+YP+ FGYPQIKF+S R
Sbjct: 241 TFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFNSPWNKTRNTIREFNS 300
Query: 328 ASWVPTNSLTYRCGQLPFVPLLGLW-GGIAYSPLLVLRQLWSKQFTPFVQGLEDWNFSYE 387
A W P + P G + GGIAYSPLLVLRQ WSKQF P V GLEDW FSYE
Sbjct: 301 AHWDPKD------------PEFGAYGGGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYE 360
Query: 388 SNEKSAKVCEAVEAWKFVRSMKSLRHCEGTTEQYDNWRATRVGIKI--AQESTNPSMEIF 447
SN + K+ EAVEAWKFV+ MKSLRHCEGTTEQYDNWRA+R GI + ES P++E+
Sbjct: 361 SNIANDKIHEAVEAWKFVKKMKSLRHCEGTTEQYDNWRASRNGITMNPMSESLVPNIEL- 420
Query: 448 RKNENQEKDLERLKQMNQVLATENEELRVEVRRLVQQATSAQRQLEEATR 491
+K ++EK+L+RL++MN VLATENE+LR EV++ VQQA + R L+EA R
Sbjct: 421 KKYHDKEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTPRDLDEAKR 457
BLAST of CmUC06G115200 vs. NCBI nr
Match:
TYK16834.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 474.2 bits (1219), Expect = 1.4e-129
Identity = 242/386 (62.69%), Postives = 296/386 (76.68%), Query Frame = 0
Query: 142 MFDLTPTIEEYRALIGILPCIGGKVYVYDRRRTLQRSLSKFLGNIHASDIKKQMKTKGGR 201
MFDLTPTIEEY ALI + G K+Y+YDR+ T++RSLSKF+G+IHAS++KKQ+K K GR
Sbjct: 1 MFDLTPTIEEYEALISLPIDRGNKLYIYDRKLTIERSLSKFMGDIHASELKKQIKAKEGR 60
Query: 202 SCIPIDYLISLTRAFLPGRKGLSLLALCIYGTVIFPRIKGYAEEEVIKLFVGIKRAVNPI 261
+CIPI+YLI+L R L +KGLSL+ALCIYGT+IFPRIKGY EEEV+K+FVGI+R VNP+
Sbjct: 61 NCIPINYLINLARGCLSRKKGLSLIALCIYGTIIFPRIKGYVEEEVVKIFVGIERGVNPV 120
Query: 262 IPIMAKTFRSLSYCRVQGKGKFFSCAPMLFIWISSHLKYPSEFGYPQIKFS--------- 321
IPIM +TFRSL++CR+QGKGKFFSCAPMLFIWISSHL+YP+ FGY QIKFS
Sbjct: 121 IPIMTETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNT 180
Query: 322 -----------------------SHLTSDEIIWRASWVPTNSLTYRCGQLPFVPLLGLW- 381
SHLT+ + IWRA W+ T+ LT+RCG+L + LLGLW
Sbjct: 181 IREFNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAIILLLGLWG 240
Query: 382 GGIAYSPLLVLRQLWSKQFTPFVQGLEDWNFSYESNEKSAKVCEAVEAWKFVRSMKSLRH 441
GGIAYSPLLVLRQ WSKQF P V GLEDW FSYESN + K+ EAVEAWKFV+ MKSLRH
Sbjct: 241 GGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANNKIHEAVEAWKFVKKMKSLRH 300
Query: 442 CEGTTEQYDNWRATRVGIKI--AQESTNPSMEIFRKNENQEKDLERLKQMNQVLATENEE 493
CEGTTEQYDNWRA+R GI I ES P++E+ +K ++EK+L+RL++MN V+ATENE+
Sbjct: 301 CEGTTEQYDNWRASRNGITINAMSESLVPNIEL-KKYHDKEKELKRLREMNCVMATENEK 360
BLAST of CmUC06G115200 vs. NCBI nr
Match:
KAA0065295.1 (uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa])
HSP 1 Score: 471.5 bits (1212), Expect = 9.1e-129
Identity = 224/355 (63.10%), Postives = 271/355 (76.34%), Query Frame = 0
Query: 28 MVDTHAPGVFAHTIPSEDSWEGVSQWSEQLQQESRFAWPRRSEISLPQFPRLEFVENNLE 87
MVDTHA V A IP+EDSW+ VSQWSE Q ES +WP++ E+ LP+ +LEF+ NNLE
Sbjct: 1 MVDTHASEVVAQLIPNEDSWKNVSQWSEHFQLESGLSWPKKLEVPLPKTCQLEFINNNLE 60
Query: 88 DLKELWENLASEHRTEFARAYGNIADLMYANISTQVLQALVHFWDPMLKCFTFSMFDLTP 147
+LK LWE+L E R EF +AYG+I DL+Y I+T LQAL HFWDP+LK FTF+ FDLTP
Sbjct: 61 ELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQALSHFWDPVLKYFTFNTFDLTP 120
Query: 148 TIEEYRALIGILPCIGGKVYVYDRRRTLQRSLSKFLGNIHASDIKKQMKTKGGRSCIPID 207
TIEEY+ALI + G K+Y+YDR+ TLQRSLSKF+G+IHAS++KK MKTK GR+CIPI+
Sbjct: 121 TIEEYQALISLPVDRGNKLYIYDRKLTLQRSLSKFMGDIHASELKKHMKTKEGRNCIPIN 180
Query: 208 YLISLTRAFLPGRKGLSLLALCIYGTVIFPRIKGYAEEEVIKLFVGIKRAVNPIIPIMAK 267
YLI+L R L G+KGLSL+ALCIYGTVIFPRIKGY EEEV+K+FVGI+R VNP+IPIMA+
Sbjct: 181 YLINLARGCLLGKKGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPVIPIMAE 240
Query: 268 TFRSLSYCRVQGKGKFFSCAPMLFIWISSHLKYPSEFGYPQIKFS--------------- 327
TFRSL++C++QGKGKFFSCAPMLFIWISSHL+YP+ FGYPQIKFS
Sbjct: 241 TFRSLNHCQIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIREFNS 300
Query: 328 -----------------SHLTSDEIIWRASWVPTNSLTYRCGQLPFVPLLGLWGG 351
SHLT+ E IWRA W+PT+ LTYRCG+L F+ LLGLWGG
Sbjct: 301 AHWDPKDPEFGVWMQFFSHLTTIEAIWRAPWMPTSPLTYRCGKLAFISLLGLWGG 355
BLAST of CmUC06G115200 vs. NCBI nr
Match:
KAA0046606.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 397.5 bits (1020), Expect = 1.7e-106
Identity = 185/272 (68.01%), Postives = 225/272 (82.72%), Query Frame = 0
Query: 28 MVDTHAPGVFAHTIPSEDSWEGVSQWSEQLQQESRFAWPRRSEISLPQFPRLEFVENNLE 87
MVDTHA V A IP+EDSWE VSQWSE Q +S +WP++ E+ LP+ +L F+ NNLE
Sbjct: 1 MVDTHASEVVAQLIPNEDSWENVSQWSEHFQLKSGSSWPKKLEVPLPKTCQLGFINNNLE 60
Query: 88 DLKELWENLASEHRTEFARAYGNIADLMYANISTQVLQALVHFWDPMLKCFTFSMFDLTP 147
+LK LWE+L E R EF +AYG+I DL+Y I+T LQAL HFWDP+LKCFTF+ FDLTP
Sbjct: 61 ELKSLWESLMPEQRAEFTKAYGSICDLLYTTINTSTLQALSHFWDPVLKCFTFNTFDLTP 120
Query: 148 TIEEYRALIGILPCIGGKVYVYDRRRTLQRSLSKFLGNIHASDIKKQMKTKGGRSCIPID 207
TIEEY+ALI + G +Y+YDR+ TLQRSLSKF+G+IHAS++KKQMKTK GR+CIPI+
Sbjct: 121 TIEEYQALISLPVDRGNNLYIYDRKLTLQRSLSKFMGDIHASELKKQMKTKEGRNCIPIN 180
Query: 208 YLISLTRAFLPGRKGLSLLALCIYGTVIFPRIKGYAEEEVIKLFVGIKRAVNPIIPIMAK 267
YLI+L R L + GLSL+ALCIYGTVIFPRIKGY EEEV+K+FVGI+R VNP+IPIMA+
Sbjct: 181 YLINLARGCLLRKNGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPVIPIMAE 240
Query: 268 TFRSLSYCRVQGKGKFFSCAPMLFIWISSHLK 300
TFRSL++CR+QGKGKFFSCAPMLFIWISSHL+
Sbjct: 241 TFRSLNHCRIQGKGKFFSCAPMLFIWISSHLR 272
BLAST of CmUC06G115200 vs. NCBI nr
Match:
KAA0032013.1 (glial fibrillary acidic protein-like [Cucumis melo var. makuwa])
HSP 1 Score: 372.9 bits (956), Expect = 4.4e-99
Identity = 201/353 (56.94%), Postives = 255/353 (72.24%), Query Frame = 0
Query: 142 MFDLTPTIEEYRALIGILPCIGGKVYVYDRRRTLQRSLSKFLGNIHASDIKKQMKTKGGR 201
MFDLTPTIEEY ALI + G K+Y+YDR+ T++RSLSKF+G+IHAS++KKQ+K K GR
Sbjct: 1 MFDLTPTIEEYEALISLPIDRGNKLYIYDRKLTIERSLSKFMGDIHASELKKQIKAKEGR 60
Query: 202 SCIPIDYLISLTRAFLPGRKGLSLLALCIYGTVIFPRIKGYAEEEVIKLFVGIKRAVNPI 261
+CIPI+YLI+L R L +KGLSL+ALCIYGT+IFPRIKGY EEEV+K+FVGI+R VNP+
Sbjct: 61 NCIPINYLINLARGCLSRKKGLSLIALCIYGTIIFPRIKGYVEEEVVKIFVGIERGVNPV 120
Query: 262 IPIMAKTFRSLSYCRVQGKGKFFSCAPMLFIWISSHLKYPSEFGYPQIKFSSHLTSDEII 321
IPIM +TFRSL++CR+Q F +L+ P +H + D +
Sbjct: 121 IPIMTETFRSLNHCRIQVFQPFND--------NRCNLESP---------LDAHKSFDTPL 180
Query: 322 WRASWVPTNSLTYRCGQLPFVPLLGLWGGIAYSPLLVLRQLWSKQFTPFVQGLEDWNFSY 381
W+ + PT + L+G GGIAYSPLLVLRQ WSKQF P V GLEDW FSY
Sbjct: 181 WKIGYYPT------------IRLMG--GGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSY 240
Query: 382 ESNEKSAKVCEAVEAWKFVRSMKSLRHCEGTTEQYDNWRATRVGIKI--AQESTNPSMEI 441
ESN + K+ EAVEAWKFV+ MKSLRHCEGTTEQYDNWRA+R GI I ES P++E+
Sbjct: 241 ESNIANNKIHEAVEAWKFVKKMKSLRHCEGTTEQYDNWRASRNGITINAMSESLVPNIEL 300
Query: 442 FRKNENQEKDLERLKQMNQVLATENEELRVEVRRLVQQATSAQRQLEEATRCL 493
+K ++EK+L+RL++MN V+ATENE+LR EV++ VQQA + QR L+EA R L
Sbjct: 301 -KKYHDKEKELKRLREMNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKL 321
BLAST of CmUC06G115200 vs. ExPASy TrEMBL
Match:
A0A5A7SUT0 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold845G00100 PE=4 SV=1)
HSP 1 Score: 589.3 bits (1518), Expect = 1.4e-164
Identity = 299/470 (63.62%), Postives = 363/470 (77.23%), Query Frame = 0
Query: 28 MVDTHAPGVFAHTIPSEDSWEGVSQWSEQLQQESRFAWPRRSEISLPQFPRLEFVENNLE 87
MVDTHA V A IP+EDSWE VSQWSE Q ES +WP++ E+ LP+ +L F+ NNLE
Sbjct: 1 MVDTHASEVVALLIPNEDSWENVSQWSEHFQLESGLSWPKKLEVPLPKTCQLGFINNNLE 60
Query: 88 DLKELWENLASEHRTEFARAYGNIADLMYANISTQVLQALVHFWDPMLKCFTFSMFDLTP 147
+LK LWE+L E R +F +AYG+I DL+Y I+T LQAL HFWDP+LKCFTF+ FDLTP
Sbjct: 61 ELKSLWESLMPEQRAKFIKAYGSIGDLLYTTINTSTLQALSHFWDPVLKCFTFNTFDLTP 120
Query: 148 TIEEYRALIGILPCIGGKVYVYDRRRTLQRSLSKFLGNIHASDIKKQMKTKGGRSCIPID 207
TIEEY+ALI + G K+Y+Y R+ TLQRSLSKF+G+IHAS++KKQMKTK GR+CIPI+
Sbjct: 121 TIEEYQALISLPVDRGNKLYIYHRKLTLQRSLSKFMGDIHASELKKQMKTKEGRNCIPIN 180
Query: 208 YLISLTRAFLPGRKGLSLLALCIYGTVIFPRIKGYAEEEVIKLFVGIKRAVNPIIPIMAK 267
YLI+L R L G+KGLSL+ALCIYGTVIFPRIKGY EEEV+K+FVGI+R VNP+IPIMA+
Sbjct: 181 YLINLARGCLLGKKGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPVIPIMAE 240
Query: 268 TFRSLSYCRVQGKGKFFSCAPMLFIWISSHLKYPSEFGYPQIKFSSHLTSDEIIWR---- 327
TFRSL++CR+QGKGKFFSCAPMLFIWISSHL+YP+ FGYPQIKF+S R
Sbjct: 241 TFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFNSPWNKTRNTIREFNS 300
Query: 328 ASWVPTNSLTYRCGQLPFVPLLGLW-GGIAYSPLLVLRQLWSKQFTPFVQGLEDWNFSYE 387
A W P + P G + GGIAYSPLLVLRQ WSKQF P V GLEDW FSYE
Sbjct: 301 AHWDPKD------------PEFGAYGGGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYE 360
Query: 388 SNEKSAKVCEAVEAWKFVRSMKSLRHCEGTTEQYDNWRATRVGIKI--AQESTNPSMEIF 447
SN + K+ EAVEAWKFV+ MKSLRHCEGTTEQYDNWRA+R GI + ES P++E+
Sbjct: 361 SNIANDKIHEAVEAWKFVKKMKSLRHCEGTTEQYDNWRASRNGITMNPMSESLVPNIEL- 420
Query: 448 RKNENQEKDLERLKQMNQVLATENEELRVEVRRLVQQATSAQRQLEEATR 491
+K ++EK+L+RL++MN VLATENE+LR EV++ VQQA + R L+EA R
Sbjct: 421 KKYHDKEKELKRLREMNCVLATENEKLREEVKKWVQQAVNTPRDLDEAKR 457
BLAST of CmUC06G115200 vs. ExPASy TrEMBL
Match:
A0A5D3D0S2 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G001090 PE=4 SV=1)
HSP 1 Score: 474.2 bits (1219), Expect = 6.8e-130
Identity = 242/386 (62.69%), Postives = 296/386 (76.68%), Query Frame = 0
Query: 142 MFDLTPTIEEYRALIGILPCIGGKVYVYDRRRTLQRSLSKFLGNIHASDIKKQMKTKGGR 201
MFDLTPTIEEY ALI + G K+Y+YDR+ T++RSLSKF+G+IHAS++KKQ+K K GR
Sbjct: 1 MFDLTPTIEEYEALISLPIDRGNKLYIYDRKLTIERSLSKFMGDIHASELKKQIKAKEGR 60
Query: 202 SCIPIDYLISLTRAFLPGRKGLSLLALCIYGTVIFPRIKGYAEEEVIKLFVGIKRAVNPI 261
+CIPI+YLI+L R L +KGLSL+ALCIYGT+IFPRIKGY EEEV+K+FVGI+R VNP+
Sbjct: 61 NCIPINYLINLARGCLSRKKGLSLIALCIYGTIIFPRIKGYVEEEVVKIFVGIERGVNPV 120
Query: 262 IPIMAKTFRSLSYCRVQGKGKFFSCAPMLFIWISSHLKYPSEFGYPQIKFS--------- 321
IPIM +TFRSL++CR+QGKGKFFSCAPMLFIWISSHL+YP+ FGY QIKFS
Sbjct: 121 IPIMTETFRSLNHCRIQGKGKFFSCAPMLFIWISSHLRYPNNFGYLQIKFSSPWNNTRNT 180
Query: 322 -----------------------SHLTSDEIIWRASWVPTNSLTYRCGQLPFVPLLGLW- 381
SHLT+ + IWRA W+ T+ LT+RCG+L + LLGLW
Sbjct: 181 IREFNSAHWDPKDTEFGVWMQFFSHLTTIDAIWRAPWMLTSPLTHRCGKLAIILLLGLWG 240
Query: 382 GGIAYSPLLVLRQLWSKQFTPFVQGLEDWNFSYESNEKSAKVCEAVEAWKFVRSMKSLRH 441
GGIAYSPLLVLRQ WSKQF P V GLEDW FSYESN + K+ EAVEAWKFV+ MKSLRH
Sbjct: 241 GGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSYESNIANNKIHEAVEAWKFVKKMKSLRH 300
Query: 442 CEGTTEQYDNWRATRVGIKI--AQESTNPSMEIFRKNENQEKDLERLKQMNQVLATENEE 493
CEGTTEQYDNWRA+R GI I ES P++E+ +K ++EK+L+RL++MN V+ATENE+
Sbjct: 301 CEGTTEQYDNWRASRNGITINAMSESLVPNIEL-KKYHDKEKELKRLREMNCVMATENEK 360
BLAST of CmUC06G115200 vs. ExPASy TrEMBL
Match:
A0A5A7VHI3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00080 PE=4 SV=1)
HSP 1 Score: 471.5 bits (1212), Expect = 4.4e-129
Identity = 224/355 (63.10%), Postives = 271/355 (76.34%), Query Frame = 0
Query: 28 MVDTHAPGVFAHTIPSEDSWEGVSQWSEQLQQESRFAWPRRSEISLPQFPRLEFVENNLE 87
MVDTHA V A IP+EDSW+ VSQWSE Q ES +WP++ E+ LP+ +LEF+ NNLE
Sbjct: 1 MVDTHASEVVAQLIPNEDSWKNVSQWSEHFQLESGLSWPKKLEVPLPKTCQLEFINNNLE 60
Query: 88 DLKELWENLASEHRTEFARAYGNIADLMYANISTQVLQALVHFWDPMLKCFTFSMFDLTP 147
+LK LWE+L E R EF +AYG+I DL+Y I+T LQAL HFWDP+LK FTF+ FDLTP
Sbjct: 61 ELKSLWESLMPEQRAEFTKAYGSIGDLLYTTINTSTLQALSHFWDPVLKYFTFNTFDLTP 120
Query: 148 TIEEYRALIGILPCIGGKVYVYDRRRTLQRSLSKFLGNIHASDIKKQMKTKGGRSCIPID 207
TIEEY+ALI + G K+Y+YDR+ TLQRSLSKF+G+IHAS++KK MKTK GR+CIPI+
Sbjct: 121 TIEEYQALISLPVDRGNKLYIYDRKLTLQRSLSKFMGDIHASELKKHMKTKEGRNCIPIN 180
Query: 208 YLISLTRAFLPGRKGLSLLALCIYGTVIFPRIKGYAEEEVIKLFVGIKRAVNPIIPIMAK 267
YLI+L R L G+KGLSL+ALCIYGTVIFPRIKGY EEEV+K+FVGI+R VNP+IPIMA+
Sbjct: 181 YLINLARGCLLGKKGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPVIPIMAE 240
Query: 268 TFRSLSYCRVQGKGKFFSCAPMLFIWISSHLKYPSEFGYPQIKFS--------------- 327
TFRSL++C++QGKGKFFSCAPMLFIWISSHL+YP+ FGYPQIKFS
Sbjct: 241 TFRSLNHCQIQGKGKFFSCAPMLFIWISSHLRYPNNFGYPQIKFSSPWNKTRNTIREFNS 300
Query: 328 -----------------SHLTSDEIIWRASWVPTNSLTYRCGQLPFVPLLGLWGG 351
SHLT+ E IWRA W+PT+ LTYRCG+L F+ LLGLWGG
Sbjct: 301 AHWDPKDPEFGVWMQFFSHLTTIEAIWRAPWMPTSPLTYRCGKLAFISLLGLWGG 355
BLAST of CmUC06G115200 vs. ExPASy TrEMBL
Match:
A0A5A7TXA1 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold114G001520 PE=4 SV=1)
HSP 1 Score: 397.5 bits (1020), Expect = 8.0e-107
Identity = 185/272 (68.01%), Postives = 225/272 (82.72%), Query Frame = 0
Query: 28 MVDTHAPGVFAHTIPSEDSWEGVSQWSEQLQQESRFAWPRRSEISLPQFPRLEFVENNLE 87
MVDTHA V A IP+EDSWE VSQWSE Q +S +WP++ E+ LP+ +L F+ NNLE
Sbjct: 1 MVDTHASEVVAQLIPNEDSWENVSQWSEHFQLKSGSSWPKKLEVPLPKTCQLGFINNNLE 60
Query: 88 DLKELWENLASEHRTEFARAYGNIADLMYANISTQVLQALVHFWDPMLKCFTFSMFDLTP 147
+LK LWE+L E R EF +AYG+I DL+Y I+T LQAL HFWDP+LKCFTF+ FDLTP
Sbjct: 61 ELKSLWESLMPEQRAEFTKAYGSICDLLYTTINTSTLQALSHFWDPVLKCFTFNTFDLTP 120
Query: 148 TIEEYRALIGILPCIGGKVYVYDRRRTLQRSLSKFLGNIHASDIKKQMKTKGGRSCIPID 207
TIEEY+ALI + G +Y+YDR+ TLQRSLSKF+G+IHAS++KKQMKTK GR+CIPI+
Sbjct: 121 TIEEYQALISLPVDRGNNLYIYDRKLTLQRSLSKFMGDIHASELKKQMKTKEGRNCIPIN 180
Query: 208 YLISLTRAFLPGRKGLSLLALCIYGTVIFPRIKGYAEEEVIKLFVGIKRAVNPIIPIMAK 267
YLI+L R L + GLSL+ALCIYGTVIFPRIKGY EEEV+K+FVGI+R VNP+IPIMA+
Sbjct: 181 YLINLARGCLLRKNGLSLIALCIYGTVIFPRIKGYVEEEVVKIFVGIERGVNPVIPIMAE 240
Query: 268 TFRSLSYCRVQGKGKFFSCAPMLFIWISSHLK 300
TFRSL++CR+QGKGKFFSCAPMLFIWISSHL+
Sbjct: 241 TFRSLNHCRIQGKGKFFSCAPMLFIWISSHLR 272
BLAST of CmUC06G115200 vs. ExPASy TrEMBL
Match:
A0A5A7SNY0 (Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G001110 PE=4 SV=1)
HSP 1 Score: 372.9 bits (956), Expect = 2.1e-99
Identity = 201/353 (56.94%), Postives = 255/353 (72.24%), Query Frame = 0
Query: 142 MFDLTPTIEEYRALIGILPCIGGKVYVYDRRRTLQRSLSKFLGNIHASDIKKQMKTKGGR 201
MFDLTPTIEEY ALI + G K+Y+YDR+ T++RSLSKF+G+IHAS++KKQ+K K GR
Sbjct: 1 MFDLTPTIEEYEALISLPIDRGNKLYIYDRKLTIERSLSKFMGDIHASELKKQIKAKEGR 60
Query: 202 SCIPIDYLISLTRAFLPGRKGLSLLALCIYGTVIFPRIKGYAEEEVIKLFVGIKRAVNPI 261
+CIPI+YLI+L R L +KGLSL+ALCIYGT+IFPRIKGY EEEV+K+FVGI+R VNP+
Sbjct: 61 NCIPINYLINLARGCLSRKKGLSLIALCIYGTIIFPRIKGYVEEEVVKIFVGIERGVNPV 120
Query: 262 IPIMAKTFRSLSYCRVQGKGKFFSCAPMLFIWISSHLKYPSEFGYPQIKFSSHLTSDEII 321
IPIM +TFRSL++CR+Q F +L+ P +H + D +
Sbjct: 121 IPIMTETFRSLNHCRIQVFQPFND--------NRCNLESP---------LDAHKSFDTPL 180
Query: 322 WRASWVPTNSLTYRCGQLPFVPLLGLWGGIAYSPLLVLRQLWSKQFTPFVQGLEDWNFSY 381
W+ + PT + L+G GGIAYSPLLVLRQ WSKQF P V GLEDW FSY
Sbjct: 181 WKIGYYPT------------IRLMG--GGIAYSPLLVLRQSWSKQFAPVVCGLEDWEFSY 240
Query: 382 ESNEKSAKVCEAVEAWKFVRSMKSLRHCEGTTEQYDNWRATRVGIKI--AQESTNPSMEI 441
ESN + K+ EAVEAWKFV+ MKSLRHCEGTTEQYDNWRA+R GI I ES P++E+
Sbjct: 241 ESNIANNKIHEAVEAWKFVKKMKSLRHCEGTTEQYDNWRASRNGITINAMSESLVPNIEL 300
Query: 442 FRKNENQEKDLERLKQMNQVLATENEELRVEVRRLVQQATSAQRQLEEATRCL 493
+K ++EK+L+RL++MN V+ATENE+LR EV++ VQQA + QR L+EA R L
Sbjct: 301 -KKYHDKEKELKRLREMNCVMATENEKLREEVKKWVQQAVNTQRDLDEAKRKL 321
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| KAA0033221.1 | 3.0e-164 | 63.62 | uncharacterized protein E6C27_scaffold845G00100 [Cucumis melo var. makuwa] | [more] |
| TYK16834.1 | 1.4e-129 | 62.69 | glial fibrillary acidic protein-like [Cucumis melo var. makuwa] | [more] |
| KAA0065295.1 | 9.1e-129 | 63.10 | uncharacterized protein E6C27_scaffold1023G00080 [Cucumis melo var. makuwa] | [more] |
| KAA0046606.1 | 1.7e-106 | 68.01 | glial fibrillary acidic protein-like [Cucumis melo var. makuwa] | [more] |
| KAA0032013.1 | 4.4e-99 | 56.94 | glial fibrillary acidic protein-like [Cucumis melo var. makuwa] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5A7SUT0 | 1.4e-164 | 63.62 | Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84... | [more] |
| A0A5D3D0S2 | 6.8e-130 | 62.69 | Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
| A0A5A7VHI3 | 4.4e-129 | 63.10 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
| A0A5A7TXA1 | 8.0e-107 | 68.01 | Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
| A0A5A7SNY0 | 2.1e-99 | 56.94 | Glial fibrillary acidic protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
