CmUC06G114400 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC06G114400
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Epidermal patterning factor-like protein
Location	CmU531Chr06: 7083269 .. 7084096 (-)
RNA-Seq Expression	CmUC06G114400
Synteny	CmUC06G114400

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACAAATTTATATATGGATTGAGATATGACAGCTCTCTGTTTTTTCTCGTTTTCTGTTTCGATTTTATGACCTTACTCCACTTCACTTCCTCCTCCATTTCTGGCCGGCGATGGCCGTAGTCCTCCTCCACCACCACCACCGTCGCCGCCGCAGCCACAGCTCTCTAACCCTTTTTCTTCTCGCCGCGGTTCTCTTCCTCCTCACTTCCGCCATTGCCGCCCGCCCCACCCCCATCGGTAAGTTCCAATCTTTTTAAAATTCCCAATTCTTTCGTGTCAAACCCATCTCTCAATTCCTCTAATTATTAACCCAGTTTTTAAATTTATTTTTTGGGTTCTTAAAAAAAAAACAGAGGAAATAAGAGCAGGAACAGAGGAGCGAGTTGTGACACGGCGAAGACTCAGCGGGCCAGGGTCGTCACCGCCGACTTGTAGATCGAAGTGCGGCAGTTGCACGCCGTGTACGGCGGTGCACGTGCCAATTCAACCGGGACTGAGTTTGCCGTTGGAATACTACCCTGAAGCTTGGCGGTGCAAATGCGGCAACTCCCTCTATATGCCATGAAATTTTAGCAAAGTTCTGTGACATTAAACACTCTTTTTTTTTTTCTTTTCTCATTTCTTCGTCCTCCTCCTCTTTGTCAAATATATTCCGGTCGATTGTTTTTGCCGCTCGTAGTCACTTCAATGGAGATTTTTTTCCTTTTGTTTCCTCTTATTTTTTTCTTAAAATGTCTATATGATATAGTGTCATCGGAACTCGAAATCCCCCATTGTTTTTTGTTTTGCTGCGTTGGGAAAGAAAGTTAAGAACTTTGGAAATACAA

mRNA sequence

AAACAAATTTATATATGGATTGAGATATGACAGCTCTCTGTTTTTTCTCGTTTTCTGTTTCGATTTTATGACCTTACTCCACTTCACTTCCTCCTCCATTTCTGGCCGGCGATGGCCGTAGTCCTCCTCCACCACCACCACCGTCGCCGCCGCAGCCACAGCTCTCTAACCCTTTTTCTTCTCGCCGCGGTTCTCTTCCTCCTCACTTCCGCCATTGCCGCCCGCCCCACCCCCATCGAGGAAATAAGAGCAGGAACAGAGGAGCGAGTTGTGACACGGCGAAGACTCAGCGGGCCAGGGTCGTCACCGCCGACTTGTAGATCGAAGTGCGGCAGTTGCACGCCGTGTACGGCGGTGCACGTGCCAATTCAACCGGGACTGAGTTTGCCGTTGGAATACTACCCTGAAGCTTGGCGGTGCAAATGCGGCAACTCCCTCTATATGCCATGAAATTTTAGCAAAGTTCTGTGACATTAAACACTCTTTTTTTTTTTCTTTTCTCATTTCTTCGTCCTCCTCCTCTTTGTCAAATATATTCCGGTCGATTGTTTTTGCCGCTCGTAGTCACTTCAATGGAGATTTTTTTCCTTTTGTTTCCTCTTATTTTTTTCTTAAAATGTCTATATGATATAGTGTCATCGGAACTCGAAATCCCCCATTGTTTTTTGTTTTGCTGCGTTGGGAAAGAAAGTTAAGAACTTTGGAAATACAA

Coding sequence (CDS)

ATGGCCGTAGTCCTCCTCCACCACCACCACCGTCGCCGCCGCAGCCACAGCTCTCTAACCCTTTTTCTTCTCGCCGCGGTTCTCTTCCTCCTCACTTCCGCCATTGCCGCCCGCCCCACCCCCATCGAGGAAATAAGAGCAGGAACAGAGGAGCGAGTTGTGACACGGCGAAGACTCAGCGGGCCAGGGTCGTCACCGCCGACTTGTAGATCGAAGTGCGGCAGTTGCACGCCGTGTACGGCGGTGCACGTGCCAATTCAACCGGGACTGAGTTTGCCGTTGGAATACTACCCTGAAGCTTGGCGGTGCAAATGCGGCAACTCCCTCTATATGCCATGA

Protein sequence

MAVVLLHHHHRRRRSHSSLTLFLLAAVLFLLTSAIAARPTPIEEIRAGTEERVVTRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP

Homology

[Close]

BLAST of CmUC06G114400 vs. NCBI nr
Match: KAG6593874.1 (EPIDERMAL PATTERNING FACTOR-like protein 4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 189.9 bits (481), Expect = 1.2e-44
Identity = 94/114 (82.46%), Postives = 96/114 (84.21%), Query Frame = 0


Query: 1   MAVVLLHHHHRRRRSHSSLTLFLLAAVLFLLTSAIAARPTPIEE--IRAGTEERVVTRRR 60
           MAVVLLHHHH   R     TLFL A VL LL SAIAARPTPI+E  +  G EERVVTRRR
Sbjct: 1   MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLVSAIAARPTPIKETQLLTGGEERVVTRRR 60

Query: 61  LSGPGSSPPTCRSKCGSCTPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP 113
           LSGPGSSPPTCRSKCGSCTPCTAVHVPI PGLSLPLEYYPEAWRCKCGNSLYMP
Sbjct: 61  LSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLYMP 114

[Close]

BLAST of CmUC06G114400 vs. NCBI nr
Match: XP_023513820.1 (EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 189.9 bits (481), Expect = 1.2e-44
Identity = 94/114 (82.46%), Postives = 96/114 (84.21%), Query Frame = 0


Query: 1   MAVVLLHHHHRRRRSHSSLTLFLLAAVLFLLTSAIAARPTPIEE--IRAGTEERVVTRRR 60
           MAVVLLHHHH   R     TLFL A VL LL SAIAARPTPI+E  +  G EERVVTRRR
Sbjct: 1   MAVVLLHHHHNHHRRRCLPTLFLFAVVLLLLASAIAARPTPIKETQLPTGGEERVVTRRR 60

Query: 61  LSGPGSSPPTCRSKCGSCTPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP 113
           LSGPGSSPPTCRSKCGSCTPCTAVHVPI PGLSLPLEYYPEAWRCKCGNSLYMP
Sbjct: 61  LSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLYMP 114

[Close]

BLAST of CmUC06G114400 vs. NCBI nr
Match: XP_023000566.1 (EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita maxima])

HSP 1 Score: 185.3 bits (469), Expect = 3.0e-43
Identity = 94/114 (82.46%), Postives = 96/114 (84.21%), Query Frame = 0


Query: 1   MAVVLLHHHHRRRRSHSSLTLFLLAAVLFLLTSAIAARPTPIEE--IRAGTEERVVTRRR 60
           MAVVLLHHHH   R     TLFL A VL LL SAIAARPTPI+E  +  G EERVVTRRR
Sbjct: 1   MAVVLLHHHHNHHRRRRLPTLFLFAVVL-LLASAIAARPTPIKETQLPTGGEERVVTRRR 60

Query: 61  LSGPGSSPPTCRSKCGSCTPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP 113
           LSGPGSSPPTCRSKCGSCTPCTAVHVPI PGLSLPLEYYPEAWRCKCGNSLYMP
Sbjct: 61  LSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLYMP 113

[Close]

BLAST of CmUC06G114400 vs. NCBI nr
Match: XP_022930459.1 (EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita moschata])

HSP 1 Score: 184.1 bits (466), Expect = 6.6e-43
Identity = 94/118 (79.66%), Postives = 96/118 (81.36%), Query Frame = 0


Query: 1   MAVVLLHHHHRRRRSHSSLTLFLLAAV----LFLLTSAIAARPTPIEE--IRAGTEERVV 60
           MAVVLLHHHH   R     TLFL A V    L LL SAIAARPTPI+E  +  G EERVV
Sbjct: 1   MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPIKETQLLTGGEERVV 60

Query: 61  TRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP 113
           TRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPI PGLSLPLEYYPEAWRCKCGNSLYMP
Sbjct: 61  TRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLYMP 118

[Close]

BLAST of CmUC06G114400 vs. NCBI nr
Match: XP_008449315.1 (PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo] >KAA0057450.1 EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo var. makuwa] >TYK30149.1 EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo var. makuwa])

HSP 1 Score: 171.0 bits (432), Expect = 5.8e-39
Identity = 90/117 (76.92%), Postives = 98/117 (83.76%), Query Frame = 0


Query: 1   MAVVLLHHHHRRRRSHSSLTLFLLAAVLFLLTSAIAARPTPIEE-----IRAGTEERVVT 60
           MAV+LLHH    RR+H  LTLFL    L LLTS+IAARPTPI+E     + AGT ERV+T
Sbjct: 1   MAVLLLHH---CRRTH--LTLFL----LLLLTSSIAARPTPIDEEAEAKLPAGTRERVLT 60

Query: 61  RRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP 113
           RRRL+GPGSSPPTCRSKCGSC PCTAVHVPIQPGLSLPLEYYPEAWRCKCGN+LYMP
Sbjct: 61  RRRLTGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 108

[Close]

BLAST of CmUC06G114400 vs. ExPASy Swiss-Prot
Match: Q9LUH9 (EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EPFL5 PE=1 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.7e-25
Identity = 56/101 (55.45%), Postives = 68/101 (67.33%), Query Frame = 0


Query: 20  TLFLLAAVLFLLTSAIAARPTPI--------EEIRAGTEERVVTRRRLSGPGSSPPTCRS 79
           TL + A +LF  +S+ A+   P         E  R+G   ++V ++RL GPGS PP CR 
Sbjct: 7   TLIVYAFLLFFSSSSAASLQRPSGGLGQGKKEIARSGLPGQIVDQKRLGGPGSVPPMCRL 66

Query: 80  KCGSCTPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP 113
           KCG C PC AVHVPIQPGL +PLEYYPEAWRCKCGN L+MP
Sbjct: 67  KCGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]

BLAST of CmUC06G114400 vs. ExPASy Swiss-Prot
Match: Q2V3I3 (EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EPFL4 PE=1 SV=1)

HSP 1 Score: 113.2 bits (282), Expect = 1.9e-24
Identity = 59/106 (55.66%), Postives = 71/106 (66.98%), Query Frame = 0


Query: 11  RRRRSHSSLTLFLLAAV-LFLLTSAIAARPTPIEEIRAGTE---ERVVTRRRLSGPGSSP 70
           RRRR      L   A + LF  +S ++A    I + R G++     + + +R  GPGSSP
Sbjct: 5   RRRRRFLLAALVTFALLHLFSASSIVSADGRWIGQ-RTGSDLPGGFIRSNKRFGGPGSSP 64

Query: 71  PTCRSKCGSCTPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP 113
           PTCRSKCG C PC  VHVPIQPGLS+PLEYYPEAWRCKCGN L+MP
Sbjct: 65  PTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109

[Close]

BLAST of CmUC06G114400 vs. ExPASy Swiss-Prot
Match: Q1PEY6 (EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EPFL6 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 6.2e-20
Identity = 41/57 (71.93%), Postives = 43/57 (75.44%), Query Frame = 0


Query: 56  RRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP 113
           RR L G GSSPP C SKCG CTPC  VHVP+ PG  +  EYYPEAWRCKCGN LYMP
Sbjct: 100 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 156

[Close]

BLAST of CmUC06G114400 vs. ExPASy Swiss-Prot
Match: Q7M1E7 (Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1)

HSP 1 Score: 55.5 bits (132), Expect = 4.6e-07
Identity = 21/49 (42.86%), Postives = 29/49 (59.18%), Query Frame = 0


Query: 64  SSPPTCRSKCGSCTPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP 113
           SSPP C++KC  C PC    + + P  + P +YYP+ W C C N +Y P
Sbjct: 468 SSPPNCKNKCKGCQPCKPKLIIVHP--NKPQDYYPQKWVCSCHNKIYNP 514

[Close]

BLAST of CmUC06G114400 vs. ExPASy Swiss-Prot
Match: Q9FY19 (Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.0e-07
Identity = 21/49 (42.86%), Postives = 29/49 (59.18%), Query Frame = 0


Query: 64  SSPPTCRSKCGSCTPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP 113
           SSPP C++KC  C PC    + + P  + P +YYP+ W C C N +Y P
Sbjct: 461 SSPPNCKNKCKGCQPCKPKLIIVHP--NQPEDYYPQRWVCSCHNKIYNP 507

[Close]

BLAST of CmUC06G114400 vs. ExPASy TrEMBL
Match: A0A6J1KG67 (Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC111494809 PE=3 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.4e-43
Identity = 94/114 (82.46%), Postives = 96/114 (84.21%), Query Frame = 0


Query: 1   MAVVLLHHHHRRRRSHSSLTLFLLAAVLFLLTSAIAARPTPIEE--IRAGTEERVVTRRR 60
           MAVVLLHHHH   R     TLFL A VL LL SAIAARPTPI+E  +  G EERVVTRRR
Sbjct: 1   MAVVLLHHHHNHHRRRRLPTLFLFAVVL-LLASAIAARPTPIKETQLPTGGEERVVTRRR 60

Query: 61  LSGPGSSPPTCRSKCGSCTPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP 113
           LSGPGSSPPTCRSKCGSCTPCTAVHVPI PGLSLPLEYYPEAWRCKCGNSLYMP
Sbjct: 61  LSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLYMP 113

[Close]

BLAST of CmUC06G114400 vs. ExPASy TrEMBL
Match: A0A6J1ERG1 (Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111436899 PE=3 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.2e-43
Identity = 94/118 (79.66%), Postives = 96/118 (81.36%), Query Frame = 0


Query: 1   MAVVLLHHHHRRRRSHSSLTLFLLAAV----LFLLTSAIAARPTPIEE--IRAGTEERVV 60
           MAVVLLHHHH   R     TLFL A V    L LL SAIAARPTPI+E  +  G EERVV
Sbjct: 1   MAVVLLHHHHNHHRRRRLPTLFLFAVVLLLLLLLLASAIAARPTPIKETQLLTGGEERVV 60

Query: 61  TRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP 113
           TRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPI PGLSLPLEYYPEAWRCKCGNSLYMP
Sbjct: 61  TRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIHPGLSLPLEYYPEAWRCKCGNSLYMP 118

[Close]

BLAST of CmUC06G114400 vs. ExPASy TrEMBL
Match: A0A5A7UQS2 (Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001330 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.8e-39
Identity = 90/117 (76.92%), Postives = 98/117 (83.76%), Query Frame = 0


Query: 1   MAVVLLHHHHRRRRSHSSLTLFLLAAVLFLLTSAIAARPTPIEE-----IRAGTEERVVT 60
           MAV+LLHH    RR+H  LTLFL    L LLTS+IAARPTPI+E     + AGT ERV+T
Sbjct: 1   MAVLLLHH---CRRTH--LTLFL----LLLLTSSIAARPTPIDEEAEAKLPAGTRERVLT 60

Query: 61  RRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP 113
           RRRL+GPGSSPPTCRSKCGSC PCTAVHVPIQPGLSLPLEYYPEAWRCKCGN+LYMP
Sbjct: 61  RRRLTGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 108

[Close]

BLAST of CmUC06G114400 vs. ExPASy TrEMBL
Match: A0A1S3BMN7 (Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103491230 PE=3 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 2.8e-39
Identity = 90/117 (76.92%), Postives = 98/117 (83.76%), Query Frame = 0


Query: 1   MAVVLLHHHHRRRRSHSSLTLFLLAAVLFLLTSAIAARPTPIEE-----IRAGTEERVVT 60
           MAV+LLHH    RR+H  LTLFL    L LLTS+IAARPTPI+E     + AGT ERV+T
Sbjct: 1   MAVLLLHH---CRRTH--LTLFL----LLLLTSSIAARPTPIDEEAEAKLPAGTRERVLT 60

Query: 61  RRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP 113
           RRRL+GPGSSPPTCRSKCGSC PCTAVHVPIQPGLSLPLEYYPEAWRCKCGN+LYMP
Sbjct: 61  RRRLTGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 108

[Close]

BLAST of CmUC06G114400 vs. ExPASy TrEMBL
Match: A0A0A0LKT0 (Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G222070 PE=3 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.9e-36
Identity = 83/118 (70.34%), Postives = 94/118 (79.66%), Query Frame = 0


Query: 1   MAVVLLHHHHRRRRSHSSLTLFLLAAVLFLLTSAIAARPTPIEE------IRAGTEERVV 60
           MA++LL HH RR    + L+L L    L LLTS+IAARPTPI++      +  GT+E  +
Sbjct: 1   MALLLLLHHRRR----TPLSLLL----LLLLTSSIAARPTPIDQEAEPKLLPPGTKEPFL 60

Query: 61  TRRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP 113
           TRRRLSGPGSSPPTCRSKCGSC PCTAVHVPIQPGLSLPLEYYPEAWRCKCGN+LYMP
Sbjct: 61  TRRRLSGPGSSPPTCRSKCGSCRPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNTLYMP 110

[Close]

BLAST of CmUC06G114400 vs. TAIR 10
Match: AT3G22820.1 (allergen-related )

HSP 1 Score: 116.7 bits (291), Expect = 1.2e-26
Identity = 56/101 (55.45%), Postives = 68/101 (67.33%), Query Frame = 0


Query: 20  TLFLLAAVLFLLTSAIAARPTPI--------EEIRAGTEERVVTRRRLSGPGSSPPTCRS 79
           TL + A +LF  +S+ A+   P         E  R+G   ++V ++RL GPGS PP CR 
Sbjct: 7   TLIVYAFLLFFSSSSAASLQRPSGGLGQGKKEIARSGLPGQIVDQKRLGGPGSVPPMCRL 66

Query: 80  KCGSCTPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP 113
           KCG C PC AVHVPIQPGL +PLEYYPEAWRCKCGN L+MP
Sbjct: 67  KCGKCEPCKAVHVPIQPGLIMPLEYYPEAWRCKCGNKLFMP 107

[Close]

BLAST of CmUC06G114400 vs. TAIR 10
Match: AT4G14723.1 (BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 113.2 bits (282), Expect = 1.3e-25
Identity = 59/106 (55.66%), Postives = 71/106 (66.98%), Query Frame = 0


Query: 11  RRRRSHSSLTLFLLAAV-LFLLTSAIAARPTPIEEIRAGTE---ERVVTRRRLSGPGSSP 70
           RRRR      L   A + LF  +S ++A    I + R G++     + + +R  GPGSSP
Sbjct: 5   RRRRRFLLAALVTFALLHLFSASSIVSADGRWIGQ-RTGSDLPGGFIRSNKRFGGPGSSP 64

Query: 71  PTCRSKCGSCTPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP 113
           PTCRSKCG C PC  VHVPIQPGLS+PLEYYPEAWRCKCGN L+MP
Sbjct: 65  PTCRSKCGKCQPCKPVHVPIQPGLSMPLEYYPEAWRCKCGNKLFMP 109

[Close]

BLAST of CmUC06G114400 vs. TAIR 10
Match: AT2G30370.1 (allergen-related )

HSP 1 Score: 98.2 bits (243), Expect = 4.4e-21
Identity = 41/57 (71.93%), Postives = 43/57 (75.44%), Query Frame = 0


Query: 56  RRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP 113
           RR L G GSSPP C SKCG CTPC  VHVP+ PG  +  EYYPEAWRCKCGN LYMP
Sbjct: 174 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 230

[Close]

BLAST of CmUC06G114400 vs. TAIR 10
Match: AT2G30370.2 (allergen-related )

HSP 1 Score: 98.2 bits (243), Expect = 4.4e-21
Identity = 41/57 (71.93%), Postives = 43/57 (75.44%), Query Frame = 0


Query: 56  RRRLSGPGSSPPTCRSKCGSCTPCTAVHVPIQPGLSLPLEYYPEAWRCKCGNSLYMP 113
           RR L G GSSPP C SKCG CTPC  VHVP+ PG  +  EYYPEAWRCKCGN LYMP
Sbjct: 100 RRILRGLGSSPPRCSSKCGRCTPCKPVHVPVPPGTPVTAEYYPEAWRCKCGNKLYMP 156

[Close]

BLAST of CmUC06G114400 vs. TAIR 10
Match: AT4G37810.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G10310.1); Has 149 Blast hits to 149 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 149; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 52.4 bits (124), Expect = 2.8e-07
Identity = 38/119 (31.93%), Postives = 52/119 (43.70%), Query Frame = 0


Query: 19  LTLFLLAAVLFLLTSAIAARPTPIEEIRAGTEERVVTRRRLSGPGSSPPTC-RSKCGSCT 78
           L L +L +  F L +     P  +E  ++G ++  +  R L   GS PP C R +C SC 
Sbjct: 12  LILLILNSTHFSLMANGRPEPDSVEFTKSGDQDVKMMMRGLI--GSRPPRCERVRCRSCG 71

Query: 79  PCTAVHVPIQPGLSL--PL----------------------EYYPEAWRCKCGNSLYMP 113
            C A+ VP  P   L  PL                       Y P +W+CKCGNS+Y P
Sbjct: 72  HCEAIQVPTNPQTKLHSPLTTSSSSSSETIHLDYTRGDDSTNYKPMSWKCKCGNSIYNP 128

The following BLAST results are available for this feature:

BLAST of CmUC06G114400 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6593874.1	1.2e-44	82.46	EPIDERMAL PATTERNING FACTOR-like protein 4, partial [Cucurbita argyrosperma subs...	[more]
XP_023513820.1	1.2e-44	82.46	EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita pepo subsp. pepo]	[more]
XP_023000566.1	3.0e-43	82.46	EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita maxima]	[more]
XP_022930459.1	6.6e-43	79.66	EPIDERMAL PATTERNING FACTOR-like protein 5 [Cucurbita moschata]	[more]
XP_008449315.1	5.8e-39	76.92	PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo] >KAA0057450...	[more]

BLAST of CmUC06G114400 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LUH9	1.7e-25	55.45	EPIDERMAL PATTERNING FACTOR-like protein 5 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q2V3I3	1.9e-24	55.66	EPIDERMAL PATTERNING FACTOR-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q1PEY6	6.2e-20	71.93	EPIDERMAL PATTERNING FACTOR-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=EP...	[more]
Q7M1E7	4.6e-07	42.86	Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1	[more]
Q9FY19	6.0e-07	42.86	Polygalacturonase OS=Juniperus ashei OX=13101 GN=JNA2 PE=1 SV=1	[more]

BLAST of CmUC06G114400 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1KG67	1.4e-43	82.46	Epidermal patterning factor-like protein OS=Cucurbita maxima OX=3661 GN=LOC11149...	[more]
A0A6J1ERG1	3.2e-43	79.66	Epidermal patterning factor-like protein OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]
A0A5A7UQS2	2.8e-39	76.92	Epidermal patterning factor-like protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3BMN7	2.8e-39	76.92	Epidermal patterning factor-like protein OS=Cucumis melo OX=3656 GN=LOC103491230...	[more]
A0A0A0LKT0	4.9e-36	70.34	Epidermal patterning factor-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G222...	[more]

BLAST of CmUC06G114400 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G22820.1	1.2e-26	55.45	allergen-related	[more]
AT4G14723.1	1.3e-25	55.66	BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1);...	[more]
AT2G30370.1	4.4e-21	71.93	allergen-related	[more]
AT2G30370.2	4.4e-21	71.93	allergen-related	[more]
AT4G37810.1	2.8e-07	31.93	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF17181	EPF	coord: 62..112 e-value: 4.3E-20 score: 71.4
None	No IPR available	PANTHER	PTHR33109:SF55	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 46..112
IPR039455	EPIDERMAL PATTERNING FACTOR-like protein	PANTHER	PTHR33109	EPIDERMAL PATTERNING FACTOR-LIKE PROTEIN 4	coord: 46..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC06G114400.1	CmUC06G114400.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010052	guard cell differentiation
biological_process	GO:0010374	stomatal complex development
cellular_component	GO:0005576	extracellular region