CmUC06G112930 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC06G112930
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	RING-H2 finger protein ATL2-like
Location	CmU531Chr06: 5405338 .. 5406066 (-)
RNA-Seq Expression	CmUC06G112930
Synteny	CmUC06G112930

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGATGACGACGACGACGCCGGCCTCTTCTCTCCGCCGTCCTATAAACGCTACGCTCTCAGTGGCAAAATTATGCTCGGCGCAATCATTTTATTGTTATTCGTCGTCATCCTCATGATTTGTCTTCATTTCTATGTTCGATTGTACCTACTGTCCTCCAGCCGCCAACAATCCCGCAACCGCATCGGCCGCCGCCGCCGCCGCCGCGAGCACTTTATCTTCACGGCGGAGCCTCGGATTGCCGCTCCGTCGCGTGGTTTGCCACAGTCGATTCTCAAATCCCTACCCGTTTTCGTTCATTCCGATAAACCCGACCCGGATCCGATTTATTGTGCGGTTTGTTTATCGGAATTTGAGGACAACGAAATCGGGCGGATTATTCCCAAATGCAACCATCGGTTCCACGTGGGATGTATTGATATGTGGTTTTATTCGCACGTGACTTGCCCGCTTTGTAGATCCGAGGTGAAACCAGAACCCGGATCCGGCTCATTTGATAACCCGGTGGAGATAACTATTGATGTTTGTGAACCGGGATCGGGATCTGGTGAGGAAGAACCGGATCGTGGGTGTCCGGTGGAGATGGCGGCGTCGGTGGAGCTGGTGGACGACGAGTCGAGGCACGTAGACGACATGTCGGATGACGGGACGTCAAGGGCAACGGCGAATTTTGTGAAGTCGTTGTCCGTGAAAGAGGAAACAGAGGCAGTGCGTTCAGAAAGATAA

mRNA sequence

ATGGCCGATGACGACGACGACGCCGGCCTCTTCTCTCCGCCGTCCTATAAACGCTACGCTCTCAGTGGCAAAATTATGCTCGGCGCAATCATTTTATTGTTATTCGTCGTCATCCTCATGATTTGTCTTCATTTCTATGTTCGATTGTACCTACTGTCCTCCAGCCGCCAACAATCCCGCAACCGCATCGGCCGCCGCCGCCGCCGCCGCGAGCACTTTATCTTCACGGCGGAGCCTCGGATTGCCGCTCCGTCGCGTGGTTTGCCACAGTCGATTCTCAAATCCCTACCCGTTTTCGTTCATTCCGATAAACCCGACCCGGATCCGATTTATTGTGCGGTTTGTTTATCGGAATTTGAGGACAACGAAATCGGGCGGATTATTCCCAAATGCAACCATCGGTTCCACGTGGGATGTATTGATATGTGGTTTTATTCGCACGTGACTTGCCCGCTTTGTAGATCCGAGGTGAAACCAGAACCCGGATCCGGCTCATTTGATAACCCGGTGGAGATAACTATTGATGTTTGTGAACCGGGATCGGGATCTGGTGAGGAAGAACCGGATCGTGGGTGTCCGGTGGAGATGGCGGCGTCGGTGGAGCTGGTGGACGACGAGTCGAGGCACGTAGACGACATGTCGGATGACGGGACGTCAAGGGCAACGGCGAATTTTGTGAAGTCGTTGTCCGTGAAAGAGGAAACAGAGGCAGTGCGTTCAGAAAGATAA

Coding sequence (CDS)

ATGGCCGATGACGACGACGACGCCGGCCTCTTCTCTCCGCCGTCCTATAAACGCTACGCTCTCAGTGGCAAAATTATGCTCGGCGCAATCATTTTATTGTTATTCGTCGTCATCCTCATGATTTGTCTTCATTTCTATGTTCGATTGTACCTACTGTCCTCCAGCCGCCAACAATCCCGCAACCGCATCGGCCGCCGCCGCCGCCGCCGCGAGCACTTTATCTTCACGGCGGAGCCTCGGATTGCCGCTCCGTCGCGTGGTTTGCCACAGTCGATTCTCAAATCCCTACCCGTTTTCGTTCATTCCGATAAACCCGACCCGGATCCGATTTATTGTGCGGTTTGTTTATCGGAATTTGAGGACAACGAAATCGGGCGGATTATTCCCAAATGCAACCATCGGTTCCACGTGGGATGTATTGATATGTGGTTTTATTCGCACGTGACTTGCCCGCTTTGTAGATCCGAGGTGAAACCAGAACCCGGATCCGGCTCATTTGATAACCCGGTGGAGATAACTATTGATGTTTGTGAACCGGGATCGGGATCTGGTGAGGAAGAACCGGATCGTGGGTGTCCGGTGGAGATGGCGGCGTCGGTGGAGCTGGTGGACGACGAGTCGAGGCACGTAGACGACATGTCGGATGACGGGACGTCAAGGGCAACGGCGAATTTTGTGAAGTCGTTGTCCGTGAAAGAGGAAACAGAGGCAGTGCGTTCAGAAAGATAA

Protein sequence

MADDDDDAGLFSPPSYKRYALSGKIMLGAIILLLFVVILMICLHFYVRLYLLSSSRQQSRNRIGRRRRRREHFIFTAEPRIAAPSRGLPQSILKSLPVFVHSDKPDPDPIYCAVCLSEFEDNEIGRIIPKCNHRFHVGCIDMWFYSHVTCPLCRSEVKPEPGSGSFDNPVEITIDVCEPGSGSGEEEPDRGCPVEMAASVELVDDESRHVDDMSDDGTSRATANFVKSLSVKEETEAVRSER

Homology

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BLAST of CmUC06G112930 vs. NCBI nr
Match: XP_038875154.1 (RING-H2 finger protein ATL2-like [Benincasa hispida])

HSP 1 Score: 417.2 bits (1071), Expect = 1.0e-112
Identity = 217/245 (88.57%), Postives = 224/245 (91.43%), Query Frame = 0


Query: 1   MADDDDDAGLFSPPSYKRYALSGKIMLGAIILLLFVVILMICLHFYVRLYLLSSSRQQSR 60
           MADDDDD GLFSPPSYKRYA SGKIMLGAIILLLFVVILMICLH YVRLYLLSSSR+QS 
Sbjct: 1   MADDDDDGGLFSPPSYKRYAFSGKIMLGAIILLLFVVILMICLHLYVRLYLLSSSRRQSH 60

Query: 61  NRIGRRRRRREHFIFTAEPRI-AAPSRGLPQSILKSLPVFVHSDKPDPDPIYCAVCLSEF 120
           +RI RRRRRREHF+FTAEPRI AAPS GLPQSILKSLPVFVHS KPDPDPIYCAVCLSEF
Sbjct: 61  SRI-RRRRRREHFVFTAEPRIAAAPSHGLPQSILKSLPVFVHSGKPDPDPIYCAVCLSEF 120

Query: 121 EDNEIGRIIPKCNHRFHVGCIDMWFYSHVTCPLCRSEVKPEPGSGS--FDNPVEITIDVC 180
           E+NEIGRIIPKCNH FHVGCIDMWFYSHVTCPLCRSEVKPE GSGS  FD+PVEI ID+ 
Sbjct: 121 EENEIGRIIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPELGSGSGPFDDPVEIAIDIS 180

Query: 181 EPGSGSGEEEPDRGCPVEMAASVELVDDESRHVDDMSDDGTSRATANFVKSLSVKEETEA 240
           EPGS SGEEEPDR CPVEMAASVELVD+ESR V DMSDDGTSR TANFVKSLSVKEE EA
Sbjct: 181 EPGSSSGEEEPDRWCPVEMAASVELVDNESRQVVDMSDDGTSRITANFVKSLSVKEEIEA 240

Query: 241 VRSER 243
           V SER
Sbjct: 241 VHSER 244

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BLAST of CmUC06G112930 vs. NCBI nr
Match: XP_004150504.1 (RING-H2 finger protein ATL2 [Cucumis sativus] >KGN47424.1 hypothetical protein Csa_021711 [Cucumis sativus])

HSP 1 Score: 386.7 bits (992), Expect = 1.4e-103
Identity = 204/247 (82.59%), Postives = 214/247 (86.64%), Query Frame = 0


Query: 1   MADDDDDAGLFSPPSYKRYALSGKIMLGAIILLLFVVILMICLHFYVRLYLLSSSRQQSR 60
           MADDDDDA L  PPSY RYALSGKIMLGAIILLLFVVILMICLH YVRL+LLSS+ + SR
Sbjct: 1   MADDDDDASLLYPPSYTRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPSR 60

Query: 61  NRIGRRRRRREHFIFTAEPRIAA---PSRGLPQSILKSLPVFVHSDKPDPDPIYCAVCLS 120
               RRRRRR+HF+FTAEPRIAA   PSRGLPQSILKSLPVFVHS+K DPDPIYCAVCLS
Sbjct: 61  I---RRRRRRQHFVFTAEPRIAAAGVPSRGLPQSILKSLPVFVHSEKTDPDPIYCAVCLS 120

Query: 121 EFEDNEIGRIIPKCNHRFHVGCIDMWFYSHVTCPLCRSEVKPEP--GSGSFDNPVEITID 180
           EFE+NEIGR IPKCNH FHVGCIDMWFYSH TCPLCRSEVKPEP   SG  D+P EI ID
Sbjct: 121 EFEENEIGRSIPKCNHSFHVGCIDMWFYSHATCPLCRSEVKPEPECESGPHDDPGEIAID 180

Query: 181 VCEPGSGSGEEEPDRGCPVEMAASVELVDDESRHVDDMSDDGTSRATANFVKSLSVKEET 240
           VCE GS SGEEE D  CPVEMAASVE+VDDESRHV+DMSDDGTSRAT NFVKSLSVKEE 
Sbjct: 181 VCELGSRSGEEETDHRCPVEMAASVEVVDDESRHVNDMSDDGTSRATVNFVKSLSVKEEI 240

Query: 241 EAVRSER 243
           EAV SER
Sbjct: 241 EAVGSER 244

[Close]

BLAST of CmUC06G112930 vs. NCBI nr
Match: XP_008458410.1 (PREDICTED: RING-H2 finger protein ATL2-like [Cucumis melo])

HSP 1 Score: 386.3 bits (991), Expect = 1.9e-103
Identity = 208/247 (84.21%), Postives = 217/247 (87.85%), Query Frame = 0


Query: 1   MADDDDDAGLFSPPSYKRYALSGKIMLGAIILLLFVVILMICLHFYVRLYLLSSS-RQQS 60
           MADDDDD  LFSPPSY+RYALSGKIMLGAIILLLFVVILMICLH YVRL+LLSSS  + S
Sbjct: 1   MADDDDDGTLFSPPSYRRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSSTHRPS 60

Query: 61  RNRIGRRRRRREHFIFTAEPRIA---APSRGLPQSILKSLPVFVHSDKPDPDPIYCAVCL 120
           R+RI RRRRRREHF+FTAEPRIA   APSRGLPQSILKSLPVFVH  K DPDPIYCAVCL
Sbjct: 61  RSRI-RRRRRREHFVFTAEPRIAAAGAPSRGLPQSILKSLPVFVHLAKTDPDPIYCAVCL 120

Query: 121 SEFEDNEIGRIIPKCNHRFHVGCIDMWFYSHVTCPLCRSEVKPEPGSGSFDNPV-EITID 180
           SEFE+NEIGR IPKCNHRFHVGCIDMWFYSHVTCPLCRSEVKPEPG GS   P  EI ID
Sbjct: 121 SEFEENEIGRSIPKCNHRFHVGCIDMWFYSHVTCPLCRSEVKPEPGCGS--GPCGEIAID 180

Query: 181 VCEPGSGSGEEEPDRGCPVEMAASVELVDDESRHVDDMSDDGTSRATANFVKSLSVKEET 240
           V E GS SGEEE D GCPVEMAASVE+V+DESRHV+DMSDDGTSRAT NFVKSLSVKEE 
Sbjct: 181 VSEVGSRSGEEERDGGCPVEMAASVEVVEDESRHVNDMSDDGTSRATVNFVKSLSVKEEI 240

Query: 241 EAVRSER 243
           EA  SER
Sbjct: 241 EAAGSER 244

[Close]

BLAST of CmUC06G112930 vs. NCBI nr
Match: XP_023006465.1 (RING-H2 finger protein ATL2-like [Cucurbita maxima])

HSP 1 Score: 345.9 bits (886), Expect = 2.8e-91
Identity = 186/246 (75.61%), Postives = 201/246 (81.71%), Query Frame = 0


Query: 1   MADDDDD-AGLFSPPSYKRYALSGKIMLGAIILLLFVVILMICLHFYVRLYLLSSSRQQS 60
           MADDDDD  GLFSP S+K YALSGKIMLG +I+LLFVVILMICLH YVRLYLLSSSR+QS
Sbjct: 1   MADDDDDGGGLFSPSSFKSYALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQS 60

Query: 61  RNRIGRRRRRREHFIFTAEPRI-AAPSRGLPQSILKSLPVFVHSDKPDPDPIYCAVCLSE 120
           R+   RRRRRR  F FT EPRI AA SRGLP SILK+LPVFVHS KPDPDP+YCAVCLSE
Sbjct: 61  RSH--RRRRRRVQFEFTTEPRIAAASSRGLPHSILKTLPVFVHSMKPDPDPVYCAVCLSE 120

Query: 121 FEDNEIGRIIPKCNHRFHVGCIDMWFYSHVTCPLCRSEVKPEPG--SGSFDNPVEITIDV 180
           FE+NEIGR IPKCNH FHVGCIDMWFYSHVTCPLCRSEVKPEPG  SG  D+PVEI +DV
Sbjct: 121 FEENEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSDDPVEIVLDV 180

Query: 181 CEPGSGSGEEEPDRGCPVEMAASVELVDDESRHVDDMSDDGTSRATANFVKSLSVKEETE 240
           CEPGS S E+EPDR CPVEMAASVELVDD SR V D     TS  T +F+KSLS+K    
Sbjct: 181 CEPGSRSSEDEPDRECPVEMAASVELVDDASRPVAD-----TSETTTSFMKSLSLKRILS 239

Query: 241 AVRSER 243
              +ER
Sbjct: 241 RDATER 239

[Close]

BLAST of CmUC06G112930 vs. NCBI nr
Match: XP_022958821.1 (RING-H2 finger protein ATL2-like [Cucurbita moschata])

HSP 1 Score: 342.4 bits (877), Expect = 3.1e-90
Identity = 181/233 (77.68%), Postives = 196/233 (84.12%), Query Frame = 0


Query: 3   DDDDDAGLFSPPSYKRYALSGKIMLGAIILLLFVVILMICLHFYVRLYLLSSSRQQSRNR 62
           DDDD  GLFSP S+K YALSGKIMLGA+I+LLFVVILMICLH YVRLYLLSSSR+QSR+ 
Sbjct: 5   DDDDGGGLFSPSSFKSYALSGKIMLGAVIVLLFVVILMICLHLYVRLYLLSSSRRQSRSH 64

Query: 63  IGRRRRRREHFIFTAEPRI-AAPSRGLPQSILKSLPVFVHSDKPDPDPIYCAVCLSEFED 122
             RRRRRR  F FT EPRI AA SRGLPQSILKSLPVFVHS KPDPDP+YCAVCLSEFE+
Sbjct: 65  --RRRRRRVQFEFTTEPRIAAASSRGLPQSILKSLPVFVHSMKPDPDPVYCAVCLSEFEE 124

Query: 123 NEIGRIIPKCNHRFHVGCIDMWFYSHVTCPLCRSEVKPEPG--SGSFDNPVEITIDVCEP 182
           NEIGR IPKCNH FHVGCIDMWFYSHVTCPLCRSEVKPEPG  SG  ++PVE+ +DVCEP
Sbjct: 125 NEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSNDPVELVLDVCEP 184

Query: 183 GSGSGEEEPDRGCPVEMAASVELVDDESRHVDDMSDDGTSRATANFVKSLSVK 233
           GS S E+EP R C VEMAASVELVDDESR   DMS+      T +FVKSLS+K
Sbjct: 185 GSRSSEDEPVRECLVEMAASVELVDDESRPAADMSE-----TTTSFVKSLSLK 230

[Close]

BLAST of CmUC06G112930 vs. ExPASy Swiss-Prot
Match: Q8L9T5 (RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2)

HSP 1 Score: 171.0 bits (432), Expect = 1.6e-41
Identity = 102/209 (48.80%), Postives = 125/209 (59.81%), Query Frame = 0


Query: 1   MADDDDDAGLFSP-----PSYKRYALSGKIMLGAIILLLFVVILMICLHFYVRLYLLSSS 60
           M  +D D   F P        K YA+SGKIML AI++L FVVILM+ LH Y R YLL + 
Sbjct: 1   MNSNDQDPIPFRPEDNNFSGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRAR 60

Query: 61  RQQSRNRIGRRRRRREHFIFTAEPRIAA----PSRGLPQSILKSLPVFVHSDKPDPDPIY 120
           R+  R R   R RR     FTA+P  AA     SRGL  +++KSLPVF  SD+   DPI 
Sbjct: 61  RRHLRRR--SRNRRATMVFFTADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIE 120

Query: 121 CAVCLSEFEDNEIGRIIPKCNHRFHVGCIDMWFYSHVTCPLCRSEVKP----EPGSGSFD 180
           CAVCLSEFE++E GR++P C H FHV CIDMWF+SH TCPLCRS V+     E  + + +
Sbjct: 121 CAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAARE 180

Query: 181 NPVEITID-----VCEPGSGSGEEEPDRG 192
             V I +D     V EP S SG  +   G
Sbjct: 181 REVVIAVDSDPVLVIEPSSSSGLTDEPHG 207

[Close]

BLAST of CmUC06G112930 vs. ExPASy Swiss-Prot
Match: O22255 (RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 5.4e-29
Identity = 73/168 (43.45%), Postives = 98/168 (58.33%), Query Frame = 0


Query: 19  YALSGKIMLGAIILLLFVVILMICLHFYVRLYLLSSSRQQSRNRIGRRRRRREHFIFTAE 78
           YAL+GKIML ++I+L   VI+++C H Y R         +  NR  RRR R      +A 
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLF------RRHNRRIRRRIRSHLRTLSAS 81

Query: 79  PRIAAPSRGLPQSILKSLPVFVHSDKPDPDP---IYCAVCLSEFEDNEIGRIIPKCNHRF 138
           PR     + L Q++L  +P+FV+S K  P P     C+VCLSEFE+ + GR++PKC H F
Sbjct: 82  PR----DQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSF 141

Query: 139 HVGCIDMWFYSHVTCPLCRSEVKP-----EPGSGSFDNPVEITIDVCE 179
           HV CID WF S  TCPLCR+ V+P     E GS S  +P+    + CE
Sbjct: 142 HVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSSSSPLTFPTEGCE 179

[Close]

BLAST of CmUC06G112930 vs. ExPASy Swiss-Prot
Match: Q9LZJ6 (RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 6.7e-27
Identity = 75/193 (38.86%), Postives = 110/193 (56.99%), Query Frame = 0


Query: 18  RYALSGKIMLGAIILLLFVVILMICLHFYVRLYLLSSSRQQSRNRIGRRRRRREHFIFTA 77
           RY+L+GKIML ++I+L   VIL++C H Y R +L     ++ R RI    R         
Sbjct: 21  RYSLNGKIMLASVIILFVAVILILCFHSYAR-WLFRRQNRRIRRRISAHLR---SLAAAR 80

Query: 78  EPRIAAPSRG-LPQSILKSLPVFVHSDKPDPDPI-YCAVCLSEFEDNEIGRIIPKCNHRF 137
           +P  ++ S   L  ++L+ +P+FV+S K    P+  C+VCLSEFE+++ GR++PKC H F
Sbjct: 81  DPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVF 140

Query: 138 HVGCIDMWFYSHVTCPLCRSEV-------KPEPGSGSFDN--PVEITIDVCEPGSGSGEE 197
           HV CID WF S  +CPLCR+ V       +PEP +  F +  P+E T    E GS S  +
Sbjct: 141 HVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDT----EAGSSSSSD 200

Query: 198 EPDRGCPVEMAAS 200
           E +   P   + S
Sbjct: 201 ESESSTPSSSSGS 205

[Close]

BLAST of CmUC06G112930 vs. ExPASy Swiss-Prot
Match: Q8LF65 (RING-H2 finger protein ATL17 OS=Arabidopsis thaliana OX=3702 GN=ATL17 PE=2 SV=2)

HSP 1 Score: 120.2 bits (300), Expect = 3.3e-26
Identity = 75/196 (38.27%), Postives = 105/196 (53.57%), Query Frame = 0


Query: 26  MLGAIILLLFVVILMICLHFYVRLYLLSSSRQQSRNRIGRRRRRREHFIFTAEPRIAAPS 85
           ML   IL+L +VILM+ LH Y R YLL SS            R      F  +P  ++  
Sbjct: 1   MLTTTILILLIVILMVSLHLYYRWYLLRSS---------PFNRTTAASTFFTDP--SSTP 60

Query: 86  RGLPQSILKSLPVFVHSDKPDPDPIYCAVCLSEFEDNEIGRIIPKCNHRFHVGCIDMWFY 145
            GL  SI+KSLP+F  S       + C+VCLSEF+DNE GR++P C H FHV CIDMWF+
Sbjct: 61  GGLNPSIIKSLPIFTFSAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFH 120

Query: 146 SHVTCPLCRSEVKPEPGSGSFDNPVEITIDVCEPGSG-----SGEEEPDRGCPVEMAASV 205
           SH +CPLCRS+++P  G G   +  E+ I + +P  G      G E      P +     
Sbjct: 121 SHSSCPLCRSQIEPFAG-GVKSSMDEVAISISDPVYGDTNHHEGTETTGDSVPEDSQRKP 180

Query: 206 ELVDDESRHVDDMSDD 217
             ++   R++ ++ +D
Sbjct: 181 AAIEISQRNLGEIEND 184

[Close]

BLAST of CmUC06G112930 vs. ExPASy Swiss-Prot
Match: P0C035 (RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 9.3e-21
Identity = 57/145 (39.31%), Postives = 78/145 (53.79%), Query Frame = 0


Query: 23  GKIMLGAIILLLFVVILMICLHFYVRLYL----------LSSSRQQSRNRIGRRRRRREH 82
           GK++L +I+ +   ++ ++ LH Y RL+           L  S       IGR  RRR  
Sbjct: 22  GKVLLFSIVSIFTGILFLLLLHLYARLFWWRVEQHFNLNLIQSDDPGSTVIGRNPRRR-R 81

Query: 83  FIFTAEPRIAAPSRGLPQSILKSLPVFVHSDKPDPDPIYCAVCLSEFEDNEIGRIIPKCN 142
           F+F         + GL   IL+S+ V V       D + CAVCLS+  D +  R++P+CN
Sbjct: 82  FVFAQSQEDPLHNAGLDSKILQSIHVVVFKCTDFKDGLECAVCLSDLVDGDKARVLPRCN 141

Query: 143 HRFHVGCIDMWFYSHVTCPLCRSEV 158
           H FHV CIDMWF SH TCPLCR+ V
Sbjct: 142 HGFHVDCIDMWFQSHSTCPLCRNTV 165

[Close]

BLAST of CmUC06G112930 vs. ExPASy TrEMBL
Match: A0A0A0KF25 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G318710 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 7.0e-104
Identity = 204/247 (82.59%), Postives = 214/247 (86.64%), Query Frame = 0


Query: 1   MADDDDDAGLFSPPSYKRYALSGKIMLGAIILLLFVVILMICLHFYVRLYLLSSSRQQSR 60
           MADDDDDA L  PPSY RYALSGKIMLGAIILLLFVVILMICLH YVRL+LLSS+ + SR
Sbjct: 1   MADDDDDASLLYPPSYTRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSTPRPSR 60

Query: 61  NRIGRRRRRREHFIFTAEPRIAA---PSRGLPQSILKSLPVFVHSDKPDPDPIYCAVCLS 120
               RRRRRR+HF+FTAEPRIAA   PSRGLPQSILKSLPVFVHS+K DPDPIYCAVCLS
Sbjct: 61  I---RRRRRRQHFVFTAEPRIAAAGVPSRGLPQSILKSLPVFVHSEKTDPDPIYCAVCLS 120

Query: 121 EFEDNEIGRIIPKCNHRFHVGCIDMWFYSHVTCPLCRSEVKPEP--GSGSFDNPVEITID 180
           EFE+NEIGR IPKCNH FHVGCIDMWFYSH TCPLCRSEVKPEP   SG  D+P EI ID
Sbjct: 121 EFEENEIGRSIPKCNHSFHVGCIDMWFYSHATCPLCRSEVKPEPECESGPHDDPGEIAID 180

Query: 181 VCEPGSGSGEEEPDRGCPVEMAASVELVDDESRHVDDMSDDGTSRATANFVKSLSVKEET 240
           VCE GS SGEEE D  CPVEMAASVE+VDDESRHV+DMSDDGTSRAT NFVKSLSVKEE 
Sbjct: 181 VCELGSRSGEEETDHRCPVEMAASVEVVDDESRHVNDMSDDGTSRATVNFVKSLSVKEEI 240

Query: 241 EAVRSER 243
           EAV SER
Sbjct: 241 EAVGSER 244

[Close]

BLAST of CmUC06G112930 vs. ExPASy TrEMBL
Match: A0A1S3C7X4 (RING-H2 finger protein ATL2-like OS=Cucumis melo OX=3656 GN=LOC103497834 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 9.1e-104
Identity = 208/247 (84.21%), Postives = 217/247 (87.85%), Query Frame = 0


Query: 1   MADDDDDAGLFSPPSYKRYALSGKIMLGAIILLLFVVILMICLHFYVRLYLLSSS-RQQS 60
           MADDDDD  LFSPPSY+RYALSGKIMLGAIILLLFVVILMICLH YVRL+LLSSS  + S
Sbjct: 1   MADDDDDGTLFSPPSYRRYALSGKIMLGAIILLLFVVILMICLHLYVRLFLLSSSTHRPS 60

Query: 61  RNRIGRRRRRREHFIFTAEPRIA---APSRGLPQSILKSLPVFVHSDKPDPDPIYCAVCL 120
           R+RI RRRRRREHF+FTAEPRIA   APSRGLPQSILKSLPVFVH  K DPDPIYCAVCL
Sbjct: 61  RSRI-RRRRRREHFVFTAEPRIAAAGAPSRGLPQSILKSLPVFVHLAKTDPDPIYCAVCL 120

Query: 121 SEFEDNEIGRIIPKCNHRFHVGCIDMWFYSHVTCPLCRSEVKPEPGSGSFDNPV-EITID 180
           SEFE+NEIGR IPKCNHRFHVGCIDMWFYSHVTCPLCRSEVKPEPG GS   P  EI ID
Sbjct: 121 SEFEENEIGRSIPKCNHRFHVGCIDMWFYSHVTCPLCRSEVKPEPGCGS--GPCGEIAID 180

Query: 181 VCEPGSGSGEEEPDRGCPVEMAASVELVDDESRHVDDMSDDGTSRATANFVKSLSVKEET 240
           V E GS SGEEE D GCPVEMAASVE+V+DESRHV+DMSDDGTSRAT NFVKSLSVKEE 
Sbjct: 181 VSEVGSRSGEEERDGGCPVEMAASVEVVEDESRHVNDMSDDGTSRATVNFVKSLSVKEEI 240

Query: 241 EAVRSER 243
           EA  SER
Sbjct: 241 EAAGSER 244

[Close]

BLAST of CmUC06G112930 vs. ExPASy TrEMBL
Match: A0A6J1L074 (RING-H2 finger protein ATL2-like OS=Cucurbita maxima OX=3661 GN=LOC111499181 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.4e-91
Identity = 186/246 (75.61%), Postives = 201/246 (81.71%), Query Frame = 0


Query: 1   MADDDDD-AGLFSPPSYKRYALSGKIMLGAIILLLFVVILMICLHFYVRLYLLSSSRQQS 60
           MADDDDD  GLFSP S+K YALSGKIMLG +I+LLFVVILMICLH YVRLYLLSSSR+QS
Sbjct: 1   MADDDDDGGGLFSPSSFKSYALSGKIMLGTVIVLLFVVILMICLHLYVRLYLLSSSRRQS 60

Query: 61  RNRIGRRRRRREHFIFTAEPRI-AAPSRGLPQSILKSLPVFVHSDKPDPDPIYCAVCLSE 120
           R+   RRRRRR  F FT EPRI AA SRGLP SILK+LPVFVHS KPDPDP+YCAVCLSE
Sbjct: 61  RSH--RRRRRRVQFEFTTEPRIAAASSRGLPHSILKTLPVFVHSMKPDPDPVYCAVCLSE 120

Query: 121 FEDNEIGRIIPKCNHRFHVGCIDMWFYSHVTCPLCRSEVKPEPG--SGSFDNPVEITIDV 180
           FE+NEIGR IPKCNH FHVGCIDMWFYSHVTCPLCRSEVKPEPG  SG  D+PVEI +DV
Sbjct: 121 FEENEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSDDPVEIVLDV 180

Query: 181 CEPGSGSGEEEPDRGCPVEMAASVELVDDESRHVDDMSDDGTSRATANFVKSLSVKEETE 240
           CEPGS S E+EPDR CPVEMAASVELVDD SR V D     TS  T +F+KSLS+K    
Sbjct: 181 CEPGSRSSEDEPDRECPVEMAASVELVDDASRPVAD-----TSETTTSFMKSLSLKRILS 239

Query: 241 AVRSER 243
              +ER
Sbjct: 241 RDATER 239

[Close]

BLAST of CmUC06G112930 vs. ExPASy TrEMBL
Match: A0A6J1H376 (RING-H2 finger protein ATL2-like OS=Cucurbita moschata OX=3662 GN=LOC111459976 PE=4 SV=1)

HSP 1 Score: 342.4 bits (877), Expect = 1.5e-90
Identity = 181/233 (77.68%), Postives = 196/233 (84.12%), Query Frame = 0


Query: 3   DDDDDAGLFSPPSYKRYALSGKIMLGAIILLLFVVILMICLHFYVRLYLLSSSRQQSRNR 62
           DDDD  GLFSP S+K YALSGKIMLGA+I+LLFVVILMICLH YVRLYLLSSSR+QSR+ 
Sbjct: 5   DDDDGGGLFSPSSFKSYALSGKIMLGAVIVLLFVVILMICLHLYVRLYLLSSSRRQSRSH 64

Query: 63  IGRRRRRREHFIFTAEPRI-AAPSRGLPQSILKSLPVFVHSDKPDPDPIYCAVCLSEFED 122
             RRRRRR  F FT EPRI AA SRGLPQSILKSLPVFVHS KPDPDP+YCAVCLSEFE+
Sbjct: 65  --RRRRRRVQFEFTTEPRIAAASSRGLPQSILKSLPVFVHSMKPDPDPVYCAVCLSEFEE 124

Query: 123 NEIGRIIPKCNHRFHVGCIDMWFYSHVTCPLCRSEVKPEPG--SGSFDNPVEITIDVCEP 182
           NEIGR IPKCNH FHVGCIDMWFYSHVTCPLCRSEVKPEPG  SG  ++PVE+ +DVCEP
Sbjct: 125 NEIGRTIPKCNHSFHVGCIDMWFYSHVTCPLCRSEVKPEPGSESGPSNDPVELVLDVCEP 184

Query: 183 GSGSGEEEPDRGCPVEMAASVELVDDESRHVDDMSDDGTSRATANFVKSLSVK 233
           GS S E+EP R C VEMAASVELVDDESR   DMS+      T +FVKSLS+K
Sbjct: 185 GSRSSEDEPVRECLVEMAASVELVDDESRPAADMSE-----TTTSFVKSLSLK 230

[Close]

BLAST of CmUC06G112930 vs. ExPASy TrEMBL
Match: A0A6J1CAT0 (RING-H2 finger protein ATL2-like OS=Momordica charantia OX=3673 GN=LOC111009784 PE=4 SV=1)

HSP 1 Score: 317.0 bits (811), Expect = 6.8e-83
Identity = 177/254 (69.69%), Postives = 194/254 (76.38%), Query Frame = 0


Query: 1   MADDDDDAGLFSPPSYKRYALSGKIMLGAIILLLFVVILMICLHFYVRLYLLSSSRQQSR 60
           MADDDDD G FSPPSYKRYALSGKIMLGAII+LLFVVILMICLH YVRLYLLSS+R+Q+ 
Sbjct: 1   MADDDDD-GFFSPPSYKRYALSGKIMLGAIIVLLFVVILMICLHLYVRLYLLSSNRRQAP 60

Query: 61  NRIGRRRRRREHFIFTAEPR----IAAPSRGLPQSILKSLPVFVHSDKPDPDPIYCAVCL 120
               RRR RR HF+FTAEPR     AAPSRGLPQSILKSLPVFVHS KPDPDPI CAVCL
Sbjct: 61  R---RRRHRRAHFVFTAEPRHAAAAAAPSRGLPQSILKSLPVFVHSAKPDPDPICCAVCL 120

Query: 121 SEFEDNEIGRIIPKCNHRFHVGCIDMWFYSHVTCPLCRSEVKPEPGSGSFDNPVEITI-- 180
           SEFE+NEIGRIIPKC H FHVGCIDMWFYSHVTCPLCRSEV+PE GS   DNP ++++  
Sbjct: 121 SEFEENEIGRIIPKCKHSFHVGCIDMWFYSHVTCPLCRSEVQPETGS---DNPPDVSVSI 180

Query: 181 ---DVCEPGSGSGE----EEPDRGCPVEMAASVELV---------DDESRHVDDMSDDGT 233
              D+ EPG  SG     EEP    P E+ + VELV         ++  R +DDMS  GT
Sbjct: 181 HDPDIPEPGPSSGSTRSGEEPGCPSPSELPSLVELVVASSEESISEEGLRQIDDMSVHGT 240

[Close]

BLAST of CmUC06G112930 vs. TAIR 10
Match: AT3G16720.1 (TOXICOS EN LEVADURA 2 )

HSP 1 Score: 171.0 bits (432), Expect = 1.2e-42
Identity = 102/209 (48.80%), Postives = 125/209 (59.81%), Query Frame = 0


Query: 1   MADDDDDAGLFSP-----PSYKRYALSGKIMLGAIILLLFVVILMICLHFYVRLYLLSSS 60
           M  +D D   F P        K YA+SGKIML AI++L FVVILM+ LH Y R YLL + 
Sbjct: 1   MNSNDQDPIPFRPEDNNFSGSKTYAMSGKIMLSAIVILFFVVILMVFLHLYARWYLLRAR 60

Query: 61  RQQSRNRIGRRRRRREHFIFTAEPRIAA----PSRGLPQSILKSLPVFVHSDKPDPDPIY 120
           R+  R R   R RR     FTA+P  AA     SRGL  +++KSLPVF  SD+   DPI 
Sbjct: 61  RRHLRRR--SRNRRATMVFFTADPSTAATSVVASRGLDPNVIKSLPVFTFSDETHKDPIE 120

Query: 121 CAVCLSEFEDNEIGRIIPKCNHRFHVGCIDMWFYSHVTCPLCRSEVKP----EPGSGSFD 180
           CAVCLSEFE++E GR++P C H FHV CIDMWF+SH TCPLCRS V+     E  + + +
Sbjct: 121 CAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRSLVESLAGIESTAAARE 180

Query: 181 NPVEITID-----VCEPGSGSGEEEPDRG 192
             V I +D     V EP S SG  +   G
Sbjct: 181 REVVIAVDSDPVLVIEPSSSSGLTDEPHG 207

[Close]

BLAST of CmUC06G112930 vs. TAIR 10
Match: AT2G47560.1 (RING/U-box superfamily protein )

HSP 1 Score: 129.4 bits (324), Expect = 3.9e-30
Identity = 73/168 (43.45%), Postives = 98/168 (58.33%), Query Frame = 0


Query: 19  YALSGKIMLGAIILLLFVVILMICLHFYVRLYLLSSSRQQSRNRIGRRRRRREHFIFTAE 78
           YAL+GKIML ++I+L   VI+++C H Y R         +  NR  RRR R      +A 
Sbjct: 22  YALNGKIMLSSVIVLFVAVIMILCFHSYARWLF------RRHNRRIRRRIRSHLRTLSAS 81

Query: 79  PRIAAPSRGLPQSILKSLPVFVHSDKPDPDP---IYCAVCLSEFEDNEIGRIIPKCNHRF 138
           PR     + L Q++L  +P+FV+S K  P P     C+VCLSEFE+ + GR++PKC H F
Sbjct: 82  PR----DQALDQAVLDKIPIFVYSSKNPPPPEEKEECSVCLSEFEEEDEGRLLPKCGHSF 141

Query: 139 HVGCIDMWFYSHVTCPLCRSEVKP-----EPGSGSFDNPVEITIDVCE 179
           HV CID WF S  TCPLCR+ V+P     E GS S  +P+    + CE
Sbjct: 142 HVDCIDTWFRSRSTCPLCRAPVQPPFQVIETGSSSSSSPLTFPTEGCE 179

[Close]

BLAST of CmUC06G112930 vs. TAIR 10
Match: AT3G62690.1 (AtL5 )

HSP 1 Score: 122.5 bits (306), Expect = 4.7e-28
Identity = 75/193 (38.86%), Postives = 110/193 (56.99%), Query Frame = 0


Query: 18  RYALSGKIMLGAIILLLFVVILMICLHFYVRLYLLSSSRQQSRNRIGRRRRRREHFIFTA 77
           RY+L+GKIML ++I+L   VIL++C H Y R +L     ++ R RI    R         
Sbjct: 21  RYSLNGKIMLASVIILFVAVILILCFHSYAR-WLFRRQNRRIRRRISAHLR---SLAAAR 80

Query: 78  EPRIAAPSRG-LPQSILKSLPVFVHSDKPDPDPI-YCAVCLSEFEDNEIGRIIPKCNHRF 137
           +P  ++ S   L  ++L+ +P+FV+S K    P+  C+VCLSEFE+++ GR++PKC H F
Sbjct: 81  DPTQSSSSLSPLDPTVLEKIPIFVYSVKTHESPLEECSVCLSEFEEDDEGRVLPKCGHVF 140

Query: 138 HVGCIDMWFYSHVTCPLCRSEV-------KPEPGSGSFDN--PVEITIDVCEPGSGSGEE 197
           HV CID WF S  +CPLCR+ V       +PEP +  F +  P+E T    E GS S  +
Sbjct: 141 HVDCIDTWFRSRSSCPLCRAPVQPAQPVTEPEPVAAVFPSVKPIEDT----EAGSSSSSD 200

Query: 198 EPDRGCPVEMAAS 200
           E +   P   + S
Sbjct: 201 ESESSTPSSSSGS 205

[Close]

BLAST of CmUC06G112930 vs. TAIR 10
Match: AT4G15975.1 (RING/U-box superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 8.9e-27
Identity = 75/196 (38.27%), Postives = 103/196 (52.55%), Query Frame = 0


Query: 26  MLGAIILLLFVVILMICLHFYVRLYLLSSSRQQSRNRIGRRRRRREHFIFTAEPRIAAPS 85
           ML   IL+L +VILM+ LH Y R YLL SS            R      F  +P  ++  
Sbjct: 1   MLTTTILILLIVILMVSLHLYYRWYLLRSS---------PFNRTTAASTFFTDP--SSTP 60

Query: 86  RGLPQSILKSLPVFVHSDKPDPDPIYCAVCLSEFEDNEIGRIIPKCNHRFHVGCIDMWFY 145
            GL  SI+KSLP+F  S       + C+VCLSEF+DNE GR++P C H FHV CIDMWF+
Sbjct: 61  GGLNPSIIKSLPIFTFSAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVDCIDMWFH 120

Query: 146 SHVTCPLCRSEVKPEPGSGSFDNPVEITIDVCEPGSG-----SGEEEPDRGCPVEMAASV 205
           SH +CPLCRS ++P  G G      E+ I + +P  G      G E      P +     
Sbjct: 121 SHSSCPLCRSLIEPFAG-GVKSTMDEVAISISDPVYGDTNHHEGTETTGDSVPEDSQRKP 180

Query: 206 ELVDDESRHVDDMSDD 217
             ++   R++ ++ +D
Sbjct: 181 AAIEISQRNLGEIEND 184

[Close]

BLAST of CmUC06G112930 vs. TAIR 10
Match: AT1G53820.1 (RING/U-box superfamily protein )

HSP 1 Score: 102.1 bits (253), Expect = 6.6e-22
Identity = 57/145 (39.31%), Postives = 78/145 (53.79%), Query Frame = 0


Query: 23  GKIMLGAIILLLFVVILMICLHFYVRLYL----------LSSSRQQSRNRIGRRRRRREH 82
           GK++L +I+ +   ++ ++ LH Y RL+           L  S       IGR  RRR  
Sbjct: 22  GKVLLFSIVSIFTGILFLLLLHLYARLFWWRVEQHFNLNLIQSDDPGSTVIGRNPRRR-R 81

Query: 83  FIFTAEPRIAAPSRGLPQSILKSLPVFVHSDKPDPDPIYCAVCLSEFEDNEIGRIIPKCN 142
           F+F         + GL   IL+S+ V V       D + CAVCLS+  D +  R++P+CN
Sbjct: 82  FVFAQSQEDPLHNAGLDSKILQSIHVVVFKCTDFKDGLECAVCLSDLVDGDKARVLPRCN 141

Query: 143 HRFHVGCIDMWFYSHVTCPLCRSEV 158
           H FHV CIDMWF SH TCPLCR+ V
Sbjct: 142 HGFHVDCIDMWFQSHSTCPLCRNTV 165

The following BLAST results are available for this feature:

BLAST of CmUC06G112930 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875154.1	1.0e-112	88.57	RING-H2 finger protein ATL2-like [Benincasa hispida]	[more]
XP_004150504.1	1.4e-103	82.59	RING-H2 finger protein ATL2 [Cucumis sativus] >KGN47424.1 hypothetical protein C...	[more]
XP_008458410.1	1.9e-103	84.21	PREDICTED: RING-H2 finger protein ATL2-like [Cucumis melo]	[more]
XP_023006465.1	2.8e-91	75.61	RING-H2 finger protein ATL2-like [Cucurbita maxima]	[more]
XP_022958821.1	3.1e-90	77.68	RING-H2 finger protein ATL2-like [Cucurbita moschata]	[more]

BLAST of CmUC06G112930 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L9T5	1.6e-41	48.80	RING-H2 finger protein ATL2 OS=Arabidopsis thaliana OX=3702 GN=ATL2 PE=2 SV=2	[more]
O22255	5.4e-29	43.45	RING-H2 finger protein ATL64 OS=Arabidopsis thaliana OX=3702 GN=ATL64 PE=2 SV=1	[more]
Q9LZJ6	6.7e-27	38.86	RING-H2 finger protein ATL5 OS=Arabidopsis thaliana OX=3702 GN=ATL5 PE=2 SV=1	[more]
Q8LF65	3.3e-26	38.27	RING-H2 finger protein ATL17 OS=Arabidopsis thaliana OX=3702 GN=ATL17 PE=2 SV=2	[more]
P0C035	9.3e-21	39.31	RING-H2 finger protein ATL60 OS=Arabidopsis thaliana OX=3702 GN=ATL60 PE=2 SV=1	[more]

BLAST of CmUC06G112930 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KF25	7.0e-104	82.59	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G318710 P...	[more]
A0A1S3C7X4	9.1e-104	84.21	RING-H2 finger protein ATL2-like OS=Cucumis melo OX=3656 GN=LOC103497834 PE=4 SV...	[more]
A0A6J1L074	1.4e-91	75.61	RING-H2 finger protein ATL2-like OS=Cucurbita maxima OX=3661 GN=LOC111499181 PE=...	[more]
A0A6J1H376	1.5e-90	77.68	RING-H2 finger protein ATL2-like OS=Cucurbita moschata OX=3662 GN=LOC111459976 P...	[more]
A0A6J1CAT0	6.8e-83	69.69	RING-H2 finger protein ATL2-like OS=Momordica charantia OX=3673 GN=LOC111009784 ...	[more]

BLAST of CmUC06G112930 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G16720.1	1.2e-42	48.80	TOXICOS EN LEVADURA 2	[more]
AT2G47560.1	3.9e-30	43.45	RING/U-box superfamily protein	[more]
AT3G62690.1	4.7e-28	38.86	AtL5	[more]
AT4G15975.1	8.9e-27	38.27	RING/U-box superfamily protein	[more]
AT1G53820.1	6.6e-22	39.31	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 112..153 e-value: 3.8E-6 score: 36.4
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 111..154 e-value: 4.6E-11 score: 42.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 112..154 score: 12.40076
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 77..160 e-value: 5.0E-18 score: 66.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..242
None	No IPR available	PANTHER	PTHR45768:SF34	RING-H2 FINGER PROTEIN ATL64	coord: 17..180
None	No IPR available	PANTHER	PTHR45768	E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE	coord: 17..180
None	No IPR available	CDD	cd16461	RING-H2_EL5_like	coord: 112..154 e-value: 4.82578E-17 score: 70.4167
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 92..160

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC06G112930.1	CmUC06G112930.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0016021	integral component of membrane