CmUC06G112620 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC06G112620
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Zinc finger CCHC domain-containing protein 10
Location	CmU531Chr06: 5053254 .. 5055813 (-)
RNA-Seq Expression	CmUC06G112620
Synteny	CmUC06G112620

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGATCGTGAGTGTTTAATAGAACTTTTAAAAGTTAAAAAAATACCCTTAAACTATTTATATGAATAGAAACCGTCGATAAGAATAACTCTAAAATTAAAAAAAAAGGTTTGACTAGACTCTTACATTTAATATAGAACCAATTTTAAAATAAATTATAATATATTCTTTGTGTAGGTGATCTCATTTTTCTCTCTTTTTTCAAATTTTACCTCAATTTTCTCAACCTCTAAAGTAAAAAACAAAACCTTAAATTAAAACATAAAATTTCAAAAAAAATCTTCCAAAATTCTAAAATCAAAATTTCACATTAAAACGTACCAAAATGATAAATAGCAAATTAAAAAAATATTTATTTAATTATTAACACACACTCAATTATGAATGTTAAAACATTTAAGGTTTTTTTTTTTTTTTTTCACTTTATTATTGAATTAAGATTAACAACTCAATTATAAAAATTTTATTAGAATAAATTATCCAAAAAAATCATGAAATTAAATAAAGACAAAATAAAAATAAAAATAAATAAATATATATATCATAATTAAAACAATACAATTTTTAAAATTAATAATAAGTTTAGGTTGATTCTAATTATTTTAGATGACCCATGAACCAATGCAACTCATAAAATTTGCATTTACTTGAATCTAATCCAACACAATTCACCGTTGGATTGATATAAATTTTCGAATTATCAGATTTTATGAACACCACTGAATTTTGAAGGTATTTTTTAGACTTTCGAAATAATAATAATAATAATAATACTAGCTGGAGACCCGACCCAATCGGAATCGGGTTCGTGTAAAACCCGTTTGTACGTTCCGTCCTCCTTCATATTTCTTTGCATTCGAGATTGCTACTCTCTACTTCGCTTACGAACTGGATTCCGTTTTATCTTCGAACCCTAAGAAAGGTACGTTCCAACTGCGATTCCTCTACTTTCAATTGATTTTGAGGGTTTTGATAGCTGCAAGCATTGCGTAATTTCACTCGATCTTTCGGATTTTCCCCTTTTGTTTACGAACCAGATCGGCGTTCTATTTCGATTCCGATCTGTTAATCAGAAACATTAGTTTTTTTTTTTTTTTTTTTTTGTGATTATGTTGTTTTAAGCTATAACTTGATCTGACTTTCGTTTAATTTCCCCGCTTTTGCGGTAACTGATGGAAACCCTAAATTGCTTTTTTCTCTGTTCTTGGTTCTTTTTCTTTGTTTTTTGTACGATTTATCTGCTCGTAATCTGGGGATTCTTTTACTATCCTATTCTTCCAATTTATCTTCCGCCCAGGTATTTATTTATATTCAGATGGTTTAGTCACAACATGTTTTATGAGAAGGAAACTTTATAGTTTTTCGTTTCGTTGTTCTCTTATTGTCTGTTTGCTCATAATTTGGTATATTCGTCATGATCTTATTCTTCAGTTTCTGATTGTTCCTTGCCATTGTGTTTGGATTTAGATATTGGAAAAACAAAGCATGTCTAGTAAGAAGGAAGAGAAGTCGCAAGCTGCTGCTGACAGGATTAAGGCTGCGGCTCTTAGTGCTGCAAAAGGACTTAGTCGTGCTCAGGCCGAACGAGCAGCTGCGGCTGCTGCTCGGAATGTTAATGCTTATGGGCAGAAGGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGGGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTCCGATTGGGTGAAAGAAAGGACATTAAGGTCTCTATGTCTAGTGCTGGTGGAGCTGCTGCACAGTGCCAGAAATGTTATCAGATGGGACACTGGACCTATGAATGCAAAAACGAACGAGTTTACATATCCCGACCATCTCGAACTCAACAACTCAAGAACCCGAAGCTGAGGATGAAGATGGCAGTCTCATTGGAGTTGGACAACCCAGATTCTGGTGAGGAAAAGAAGCCCAAGAAGCATTCAAAGAAGAAAAGTAAAAGAAAGCATCGGTCCGATGAAAAATCCAATAGTGATAGCGAGGCCTCTGTATTTGAGACTGATAGTGGTTCATCATCAGTTACTGAATCTGATGATTCTTCTGAAGCAAGCAGTTCAGATTACAGTTCTTCATCCGAATCAGAGTCAGAAAGGAGTCGAAGAAGGAGAAAGAAGCAAAAGAGGGGGAGAAGAAAGAGGAGGTACAGTTCGTCTTCTGATTCTTCTGATTCAGACTCAGGGTCTGAATCAGAGGCTGATTCTGACAATGAACGTAGTAGGAGGAAAAGCCGAAGGCACAGCAGAAAACGCTAGTTAAGGTAATCGCAGGAGTGAAACAAATTAGAATGGTTGATATATCATTGCAATTGTAGTCAGTTTAGAGATTCGAGTTCATTCAGTTTCTTGTTTAGGGACACTCTGGATAGAGGAGTTGTGTGTAACCTGAAGTTTGGTTTTCTTTTCTTCTTCTAATAGTTGAGTTTAGCATCTTCTTCCTTTCCTTTGCTCTCTTCTTAACTCTTATGGATGTATAAATTATTGATGCTTTACTTCTATAATTGCTATGTTACGGATGTTGGTTCTTGAATAAA

mRNA sequence

ATGGAGATCATATTGGAAAAACAAAGCATGTCTAGTAAGAAGGAAGAGAAGTCGCAAGCTGCTGCTGACAGGATTAAGGCTGCGGCTCTTAGTGCTGCAAAAGGACTTAGTCGTGCTCAGGCCGAACGAGCAGCTGCGGCTGCTGCTCGGAATGTTAATGCTTATGGGCAGAAGGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGGGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTCCGATTGGGTGAAAGAAAGGACATTAAGGTCTCTATGTCTAGTGCTGGTGGAGCTGCTGCACAGTGCCAGAAATGTTATCAGATGGGACACTGGACCTATGAATGCAAAAACGAACGAGTTTACATATCCCGACCATCTCGAACTCAACAACTCAAGAACCCGAAGCTGAGGATGAAGATGGCAGTCTCATTGGAGTTGGACAACCCAGATTCTGGTGAGGAAAAGAAGCCCAAGAAGCATTCAAAGAAGAAAAGTAAAAGAAAGCATCGGTCCGATGAAAAATCCAATAGTGATAGCGAGGCCTCTGTATTTGAGACTGATAGTGGTTCATCATCAGTTACTGAATCTGATGATTCTTCTGAAGCAAGCAGTTCAGATTACAGTTCTTCATCCGAATCAGAGTCAGAAAGGAGTCGAAGAAGGAGAAAGAAGCAAAAGAGGGGGAGAAGAAAGAGGAGGTACAGTTCGTCTTCTGATTCTTCTGATTCAGACTCAGGGTCTGAATCAGAGGCTGATTCTGACAATGAACGTAGTAGGAGGAAAAGCCGAAGGCACAGCAGAAAACGCTAGTTAAGGTAATCGCAGGAGTGAAACAAATTAGAATGGTTGATATATCATTGCAATTGTAGTCAGTTTAGAGATTCGAGTTCATTCAGTTTCTTGTTTAGGGACACTCTGGATAGAGGAGTTGTGTGTAACCTGAAGTTTGGTTTTCTTTTCTTCTTCTAATAGTTGAGTTTAGCATCTTCTTCCTTTCCTTTGCTCTCTTCTTAACTCTTATGGATGTATAAATTATTGATGCTTTACTTCTATAATTGCTATGTTACGGATGTTGGTTCTTGAATAAA

Coding sequence (CDS)

ATGGAGATCATATTGGAAAAACAAAGCATGTCTAGTAAGAAGGAAGAGAAGTCGCAAGCTGCTGCTGACAGGATTAAGGCTGCGGCTCTTAGTGCTGCAAAAGGACTTAGTCGTGCTCAGGCCGAACGAGCAGCTGCGGCTGCTGCTCGGAATGTTAATGCTTATGGGCAGAAGGAAGAAGGGCCTAGCAGATGGCAGGAGAAAAGGGAAGCAAAGAGGCAGATGTATTTGATGAGTACTGAAAAGGCAGTCCGATTGGGTGAAAGAAAGGACATTAAGGTCTCTATGTCTAGTGCTGGTGGAGCTGCTGCACAGTGCCAGAAATGTTATCAGATGGGACACTGGACCTATGAATGCAAAAACGAACGAGTTTACATATCCCGACCATCTCGAACTCAACAACTCAAGAACCCGAAGCTGAGGATGAAGATGGCAGTCTCATTGGAGTTGGACAACCCAGATTCTGGTGAGGAAAAGAAGCCCAAGAAGCATTCAAAGAAGAAAAGTAAAAGAAAGCATCGGTCCGATGAAAAATCCAATAGTGATAGCGAGGCCTCTGTATTTGAGACTGATAGTGGTTCATCATCAGTTACTGAATCTGATGATTCTTCTGAAGCAAGCAGTTCAGATTACAGTTCTTCATCCGAATCAGAGTCAGAAAGGAGTCGAAGAAGGAGAAAGAAGCAAAAGAGGGGGAGAAGAAAGAGGAGGTACAGTTCGTCTTCTGATTCTTCTGATTCAGACTCAGGGTCTGAATCAGAGGCTGATTCTGACAATGAACGTAGTAGGAGGAAAAGCCGAAGGCACAGCAGAAAACGCTAG

Protein sequence

MEIILEKQSMSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGEEKKPKKHSKKKSKRKHRSDEKSNSDSEASVFETDSGSSSVTESDDSSEASSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESEADSDNERSRRKSRRHSRKR

Homology

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BLAST of CmUC06G112620 vs. NCBI nr
Match: XP_011649249.1 (zinc finger CCHC domain-containing protein 10 [Cucumis sativus] >KGN61833.1 hypothetical protein Csa_006617 [Cucumis sativus])

HSP 1 Score: 419.5 bits (1077), Expect = 2.3e-113
Identity = 254/264 (96.21%), Postives = 257/264 (97.35%), Query Frame = 0


Query: 10  MSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 69
           MSSKKEEKSQAAA+RIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 70  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 129
           EAKRQMYLMSTEKAVRLGERKDIK SMS AGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 130 SRTQQLKNPKLRMKMAVSLELDNPDSGEEKKPKKHSKKKSKRKHRSDEKSNSDSEASVFE 189
           SRTQQLKNPKLRMKM VSLELDNPD GEEKKPKKHSKKKSKRKHRS+ KSNSDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPKKHSKKKSKRKHRSNAKSNSDSEASVFE 180

Query: 190 TDSGSSSVTESDDSSEASSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 249
           TDSGSSSVTESDDSSE SSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 250 GSESEADSDNERSRRKSRRHSRKR 274
            SESE+DSDNERSRRKSRRHSRKR
Sbjct: 241 RSESESDSDNERSRRKSRRHSRKR 264

[Close]

BLAST of CmUC06G112620 vs. NCBI nr
Match: XP_008460988.2 (PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis melo] >XP_008460989.1 PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis melo] >KAA0045615.1 zinc finger CCHC domain-containing protein 10 [Cucumis melo var. makuwa])

HSP 1 Score: 412.5 bits (1059), Expect = 2.8e-111
Identity = 250/264 (94.70%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 10  MSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 69
           MSSKKEEKSQAAA+RIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 70  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 129
           EAKRQMYLMSTEKAVRLGERKDIK SMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 130 SRTQQLKNPKLRMKMAVSLELDNPDSGEEKKPKKHSKKKSKRKHRSDEKSNSDSEASVFE 189
           SRTQQLKNPKLRMKM VSLELDNPD GEE+KPKKHSK KSKRKHRS+ KS+SDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFE 180

Query: 190 TDSGSSSVTESDDSSEASSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 249
           TDSGSSSVTESDDSSE SSSDYSSSSESE ERSRRRRKKQKRGRRKRRYSSSSDSSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 250 GSESEADSDNERSRRKSRRHSRKR 274
            SESE+DSDNERSRRKSRRHSR+R
Sbjct: 241 RSESESDSDNERSRRKSRRHSRRR 264

[Close]

BLAST of CmUC06G112620 vs. NCBI nr
Match: KAG6575110.1 (Zinc finger CCHC domain-containing protein 10, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 403.7 bits (1036), Expect = 1.3e-108
Identity = 252/274 (91.97%), Postives = 261/274 (95.26%), Query Frame = 0


Query: 4   ILEKQSMSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPS 63
           IL+KQSMSSKKEEKSQAAA+RIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPS
Sbjct: 34  ILKKQSMSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPS 93

Query: 64  RWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQMGHWTYECKNER 123
           RWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMS+AGGAAAQCQKCYQ GHWTYECKNER
Sbjct: 94  RWQEKREAKRQMYLMSTEKAVRLGERKDIKVSMSTAGGAAAQCQKCYQSGHWTYECKNER 153

Query: 124 VYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGEEKK--PKKHSKKKSKRKHRSDEKSNS 183
           VYISRPSRTQQLKNPKLRMKMAVSLELDNPDSG+E+K   KK  KKKSKRKHRS+ KSNS
Sbjct: 154 VYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNS 213

Query: 184 DSEASVFETDSGSSSVTESDDSSEASSSDYSSSSESESERS--RRRRKKQKRGRRKRRYS 243
           DSEASVFETDSGSSSVT SDDSSE SSSDYSSSS+SESERS  RRRRKKQKRGRRKRRYS
Sbjct: 214 DSEASVFETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYS 273

Query: 244 SSSDSSDSDSGSESEADSDNERSRRKSRRHSRKR 274
           SSSDSSDSDS SESE+DSD+ERSRRKSRRHSRKR
Sbjct: 274 SSSDSSDSDSESESESDSDHERSRRKSRRHSRKR 307

[Close]

BLAST of CmUC06G112620 vs. NCBI nr
Match: XP_022959515.1 (zinc finger CCHC domain-containing protein 10-like [Cucurbita moschata])

HSP 1 Score: 400.2 bits (1027), Expect = 1.4e-107
Identity = 249/268 (92.91%), Postives = 256/268 (95.52%), Query Frame = 0


Query: 10  MSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 69
           MSSKKEEKSQAAA+RIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 70  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 129
           EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 130 SRTQQLKNPKLRMKMAVSLELDNPDSGEEKK--PKKHSKKKSKRKHRSDEKSNSDSEASV 189
           SRTQQLKNPKLRMKMAVSLELDNPDSG+E+K   KK  KKKSKRKHRS+ KSNSDSEASV
Sbjct: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASV 180

Query: 190 FETDSGSSSVTESDDSSEASSSDYSSSSESESERS--RRRRKKQKRGRRKRRYSSSSDSS 249
           FETDSGSSSVT SDDSSE SSSDYSSSS+SESERS  RRRRKKQKRGRRKRRYSSSSDSS
Sbjct: 181 FETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSS 240

Query: 250 DSDSGSESEADSDNERSRRKSRRHSRKR 274
           DSDSGSESE+DSD+ERSRRKSRRHSRKR
Sbjct: 241 DSDSGSESESDSDHERSRRKSRRHSRKR 268

[Close]

BLAST of CmUC06G112620 vs. NCBI nr
Match: KAG7013679.1 (Zinc finger CCHC domain-containing protein 10 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 397.1 bits (1019), Expect = 1.2e-106
Identity = 248/268 (92.54%), Postives = 255/268 (95.15%), Query Frame = 0


Query: 10  MSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 69
           MSSKKEEKSQAAA+RIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 70  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 129
           EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 130 SRTQQLKNPKLRMKMAVSLELDNPDSGEEKK--PKKHSKKKSKRKHRSDEKSNSDSEASV 189
           SRTQQLKNPKLRMKMAVSLELDNPDSG+E+K   KK  KKKSKRKHRS+ KSNSDSEASV
Sbjct: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASV 180

Query: 190 FETDSGSSSVTESDDSSEASSSDYSSSSESESERS--RRRRKKQKRGRRKRRYSSSSDSS 249
           FETDSGSSSVT SDDSSE SSSDYSSSS+SESERS  RRRRKKQKRGRRKRRYSSSSDSS
Sbjct: 181 FETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSS 240

Query: 250 DSDSGSESEADSDNERSRRKSRRHSRKR 274
           DSDS SESE+DSD+ERSRRKSRRHSRKR
Sbjct: 241 DSDSESESESDSDHERSRRKSRRHSRKR 268

[Close]

BLAST of CmUC06G112620 vs. ExPASy Swiss-Prot
Match: Q5EB97 (Zinc finger CCHC domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Zcchc10 PE=2 SV=2)

HSP 1 Score: 55.5 bits (132), Expect = 1.1e-06
Identity = 67/171 (39.18%), Postives = 89/171 (52.05%), Query Frame = 0


Query: 105 QCQKCYQMGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGEEKKPKKH 164
           +CQKC + GHWTYECK +R Y+ RPSRT +LK   L+ K    L+    ++  E+K KK 
Sbjct: 22  RCQKCLEFGHWTYECKGKRKYLHRPSRTAELKK-ALKEKENRLLQQSMGETNTERKTKKK 81

Query: 165 SKKKSKRKHRSDEKSNSDSEASVFETDSGSSSVTESDD--SSEASSSDYSSSSESESERS 224
            + KS     S + S S+S +    + S SS  +++D   SS +SSS YSSSS S S   
Sbjct: 82  RRPKSVTSTSSSDSSASESSSESETSASSSSEDSDADGSLSSSSSSSAYSSSSSSSS--- 141

Query: 225 RRRRKKQKRGRRKRRYSSSSDSSDSDSGSESEADSDNERSRRKSRRHSRKR 274
                           SSSS SSDSDS S S + S +E S        RK+
Sbjct: 142 ----------------SSSSSSSDSDSSSSSSSSSSSESSSDDEPPKKRKK 172

[Close]

BLAST of CmUC06G112620 vs. ExPASy Swiss-Prot
Match: Q9CX48 (Zinc finger CCHC domain-containing protein 10 OS=Mus musculus OX=10090 GN=Zcchc10 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.5e-06
Identity = 65/164 (39.63%), Postives = 83/164 (50.61%), Query Frame = 0


Query: 105 QCQKCYQMGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNPDSGEEKKPKKH 164
           +CQKC + GHWTYECK +R Y+ RPSRT +LK      +  + L+      GE    KK 
Sbjct: 22  RCQKCLEFGHWTYECKGKRKYLHRPSRTAELKKALKEKENRLLLQ----SIGETNIEKKI 81

Query: 165 SKKKSKRKHRSDEKSNSDSEASVFETDSGSSSVTESDDSSEASSSDYSSSSESESERSRR 224
            KKK  +   S   S+SDS AS    +S S S T +  SSE S SD S SS S S  S  
Sbjct: 82  KKKKRSKSVTSSSTSSSDSSAS----ESSSESETSASSSSEDSDSDESLSSSSSSSSSSA 141

Query: 225 RRKKQKRGRRKRRYSSSSDSSDSDSGSESEADSDNERSRRKSRR 269
                          S S SS S S S SE+ SD+E  ++K ++
Sbjct: 142 CSSSSSSSSSSSSSDSDSSSSSSSSSSSSESSSDDEPQKKKKKK 177

[Close]

BLAST of CmUC06G112620 vs. ExPASy Swiss-Prot
Match: Q8TBK6 (Zinc finger CCHC domain-containing protein 10 OS=Homo sapiens OX=9606 GN=ZCCHC10 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.6e-05
Identity = 60/176 (34.09%), Postives = 90/176 (51.14%), Query Frame = 0


Query: 94  VSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRPSRTQQLKNPKLRMKMAVSLELDNP 153
           + +S A     +CQKC + GHWTYEC  +R Y+ RPSRT +LK      +  + L+    
Sbjct: 33  IVISEANKQHVRCQKCLEFGHWTYECTGKRKYLHRPSRTAELKKALKEKENRLLLQQSIG 92

Query: 154 DSGEEKK-PKKHSKKKSKRKHRSDEKSNSDSEASVFETDSGSSSVTESDDSSEASSSDYS 213
           ++  E+K  KK SK  +     S + S SDS +   ET + SSS  E  D+ E+SSS  S
Sbjct: 93  ETNVERKAKKKRSKSVTSSSSSSSDSSASDSSSESEETSTSSSS--EDSDTDESSSSSSS 152

Query: 214 SSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDSGSESEADSDNERSRRKSRR 269
           S+S + S  S                S S  SS S S + +++ SD+E  ++K ++
Sbjct: 153 SASSTTSSSSSD--------------SDSDSSSSSSSSTSTDSSSDDEPPKKKKKK 192

[Close]

BLAST of CmUC06G112620 vs. ExPASy TrEMBL
Match: A0A0A0LJ33 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249870 PE=4 SV=1)

HSP 1 Score: 419.5 bits (1077), Expect = 1.1e-113
Identity = 254/264 (96.21%), Postives = 257/264 (97.35%), Query Frame = 0


Query: 10  MSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 69
           MSSKKEEKSQAAA+RIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 70  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 129
           EAKRQMYLMSTEKAVRLGERKDIK SMS AGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSGAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 130 SRTQQLKNPKLRMKMAVSLELDNPDSGEEKKPKKHSKKKSKRKHRSDEKSNSDSEASVFE 189
           SRTQQLKNPKLRMKM VSLELDNPD GEEKKPKKHSKKKSKRKHRS+ KSNSDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEKKPKKHSKKKSKRKHRSNAKSNSDSEASVFE 180

Query: 190 TDSGSSSVTESDDSSEASSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 249
           TDSGSSSVTESDDSSE SSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 250 GSESEADSDNERSRRKSRRHSRKR 274
            SESE+DSDNERSRRKSRRHSRKR
Sbjct: 241 RSESESDSDNERSRRKSRRHSRKR 264

[Close]

BLAST of CmUC06G112620 vs. ExPASy TrEMBL
Match: A0A1S3CDQ2 (zinc finger CCHC domain-containing protein 10 OS=Cucumis melo OX=3656 GN=LOC103499707 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.3e-111
Identity = 250/264 (94.70%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 10  MSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 69
           MSSKKEEKSQAAA+RIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 70  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 129
           EAKRQMYLMSTEKAVRLGERKDIK SMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 130 SRTQQLKNPKLRMKMAVSLELDNPDSGEEKKPKKHSKKKSKRKHRSDEKSNSDSEASVFE 189
           SRTQQLKNPKLRMKM VSLELDNPD GEE+KPKKHSK KSKRKHRS+ KS+SDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFE 180

Query: 190 TDSGSSSVTESDDSSEASSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 249
           TDSGSSSVTESDDSSE SSSDYSSSSESE ERSRRRRKKQKRGRRKRRYSSSSDSSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 250 GSESEADSDNERSRRKSRRHSRKR 274
            SESE+DSDNERSRRKSRRHSR+R
Sbjct: 241 RSESESDSDNERSRRKSRRHSRRR 264

[Close]

BLAST of CmUC06G112620 vs. ExPASy TrEMBL
Match: A0A5A7TW64 (Zinc finger CCHC domain-containing protein 10 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G001260 PE=4 SV=1)

HSP 1 Score: 412.5 bits (1059), Expect = 1.3e-111
Identity = 250/264 (94.70%), Postives = 256/264 (96.97%), Query Frame = 0


Query: 10  MSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 69
           MSSKKEEKSQAAA+RIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 70  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 129
           EAKRQMYLMSTEKAVRLGERKDIK SMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKGSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 120

Query: 130 SRTQQLKNPKLRMKMAVSLELDNPDSGEEKKPKKHSKKKSKRKHRSDEKSNSDSEASVFE 189
           SRTQQLKNPKLRMKM VSLELDNPD GEE+KPKKHSK KSKRKHRS+ KS+SDSEASVFE
Sbjct: 121 SRTQQLKNPKLRMKMEVSLELDNPDPGEEEKPKKHSKNKSKRKHRSNAKSDSDSEASVFE 180

Query: 190 TDSGSSSVTESDDSSEASSSDYSSSSESESERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 249
           TDSGSSSVTESDDSSE SSSDYSSSSESE ERSRRRRKKQKRGRRKRRYSSSSDSSDSDS
Sbjct: 181 TDSGSSSVTESDDSSEESSSDYSSSSESECERSRRRRKKQKRGRRKRRYSSSSDSSDSDS 240

Query: 250 GSESEADSDNERSRRKSRRHSRKR 274
            SESE+DSDNERSRRKSRRHSR+R
Sbjct: 241 RSESESDSDNERSRRKSRRHSRRR 264

[Close]

BLAST of CmUC06G112620 vs. ExPASy TrEMBL
Match: A0A6J1H6H5 (zinc finger CCHC domain-containing protein 10-like OS=Cucurbita moschata OX=3662 GN=LOC111460472 PE=4 SV=1)

HSP 1 Score: 400.2 bits (1027), Expect = 6.9e-108
Identity = 249/268 (92.91%), Postives = 256/268 (95.52%), Query Frame = 0


Query: 10  MSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 69
           MSSKKEEKSQAAA+RIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 70  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 129
           EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 130 SRTQQLKNPKLRMKMAVSLELDNPDSGEEKK--PKKHSKKKSKRKHRSDEKSNSDSEASV 189
           SRTQQLKNPKLRMKMAVSLELDNPDSG+E+K   KK  KKKSKRKHRS+ KSNSDSEASV
Sbjct: 121 SRTQQLKNPKLRMKMAVSLELDNPDSGDEEKKTKKKQLKKKSKRKHRSEPKSNSDSEASV 180

Query: 190 FETDSGSSSVTESDDSSEASSSDYSSSSESESERS--RRRRKKQKRGRRKRRYSSSSDSS 249
           FETDSGSSSVT SDDSSE SSSDYSSSS+SESERS  RRRRKKQKRGRRKRRYSSSSDSS
Sbjct: 181 FETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSS 240

Query: 250 DSDSGSESEADSDNERSRRKSRRHSRKR 274
           DSDSGSESE+DSD+ERSRRKSRRHSRKR
Sbjct: 241 DSDSGSESESDSDHERSRRKSRRHSRKR 268

[Close]

BLAST of CmUC06G112620 vs. ExPASy TrEMBL
Match: A0A6J1L1Z2 (zinc finger CCHC domain-containing protein 10 OS=Cucurbita maxima OX=3661 GN=LOC111499120 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.9e-106
Identity = 249/268 (92.91%), Postives = 255/268 (95.15%), Query Frame = 0


Query: 10  MSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 69
           MSSKKEEKSQAAA+RIKAAALSAAKGLSRAQAERAA AAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSSKKEEKSQAAAERIKAAALSAAKGLSRAQAERAATAAARNVNAYGQKEEGPSRWQEKR 60

Query: 70  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQMGHWTYECKNERVYISRP 129
           EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQ GHWTYECKNERVYISRP
Sbjct: 61  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAGGAAAQCQKCYQSGHWTYECKNERVYISRP 120

Query: 130 SRTQQLKNPKLRMKMAVSLELDNPDSG-EEKKPKKHS-KKKSKRKHRSDEKSNSDSEASV 189
           SRTQQLKNPKLRMKMAVSLE+DNPDSG EEKK KK   KKKSKRKHRS+ KSNSDSEASV
Sbjct: 121 SRTQQLKNPKLRMKMAVSLEMDNPDSGDEEKKTKKRQLKKKSKRKHRSELKSNSDSEASV 180

Query: 190 FETDSGSSSVTESDDSSEASSSDYSSSSESESERS--RRRRKKQKRGRRKRRYSSSSDSS 249
           FETDSGSSSVT SDDSSE SSSDYSSSS+SESERS  RRRRKKQKRGRRKRRYSSSSDSS
Sbjct: 181 FETDSGSSSVTGSDDSSEESSSDYSSSSDSESERSRRRRRRKKQKRGRRKRRYSSSSDSS 240

Query: 250 DSDSGSESEADSDNERSRRKSRRHSRKR 274
           DSDS SESE+DSD+ERSRRKSRRHSRKR
Sbjct: 241 DSDSESESESDSDHERSRRKSRRHSRKR 268

[Close]

BLAST of CmUC06G112620 vs. TAIR 10
Match: AT5G49400.1 (zinc knuckle (CCHC-type) family protein )

HSP 1 Score: 266.5 bits (680), Expect = 2.3e-71
Identity = 185/282 (65.60%), Postives = 213/282 (75.53%), Query Frame = 0


Query: 10  MSSKKEEKSQAAADRIKAAALSAAKGLSRAQAERAAAAAARNVNAYGQKEEGPSRWQEKR 69
           MS+ K+EKSQ AADRIKAA L+AAKGLSR QAERAAAAAARNVNAYGQKEEGPSRWQEKR
Sbjct: 1   MSNSKDEKSQDAADRIKAATLTAAKGLSRTQAERAAAAAARNVNAYGQKEEGPSRWQEKR 60

Query: 70  EAKRQMYLMSTEKAVRLGERKDIKVSMSSAG---GAAAQCQKCYQMGHWTYECKNERVYI 129
           E KRQMYLMSTEKAVRLGERKD  +S S+ G    AA+QCQKC+Q GHWTYECKNERVYI
Sbjct: 61  ELKRQMYLMSTEKAVRLGERKDKTMSASAVGSSASAASQCQKCFQAGHWTYECKNERVYI 120

Query: 130 SRPSRTQQLKNPKLRMKMAVSLELDNPDSGEEKKPK--------KHSKKKSKRKHRSDEK 189
           SRPSRTQQLKNPKLR K +V     + D  EE++P         +   KKSKRKHRS   
Sbjct: 121 SRPSRTQQLKNPKLRTKPSVDDLDGSDDDDEEERPDATNGKAEVEKRSKKSKRKHRSKSD 180

Query: 190 SNSDSEASVFETDSGSSSVTESDDSSEASSSDYSSSSESESERSRRR-------RKKQKR 249
           S SDSEASVFETD        SD SS  SSS+YSSSS+SE ER RRR       ++KQ++
Sbjct: 181 SESDSEASVFETD--------SDGSSGESSSEYSSSSDSEDERRRRRKAKKSKKKQKQRK 240

Query: 250 GRRKRRYSSSSDSSDSDSGSESEADSDNERSRRKSRRHSRKR 274
            RR+R  SSSS+SS+S+S S+S++D D  R ++KS+RHS KR
Sbjct: 241 ERRRRYSSSSSESSESESASDSDSDEDRSRRKKKSKRHSNKR 274

The following BLAST results are available for this feature:

BLAST of CmUC06G112620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649249.1	2.3e-113	96.21	zinc finger CCHC domain-containing protein 10 [Cucumis sativus] >KGN61833.1 hypo...	[more]
XP_008460988.2	2.8e-111	94.70	PREDICTED: zinc finger CCHC domain-containing protein 10 [Cucumis melo] >XP_0084...	[more]
KAG6575110.1	1.3e-108	91.97	Zinc finger CCHC domain-containing protein 10, partial [Cucurbita argyrosperma s...	[more]
XP_022959515.1	1.4e-107	92.91	zinc finger CCHC domain-containing protein 10-like [Cucurbita moschata]	[more]
KAG7013679.1	1.2e-106	92.54	Zinc finger CCHC domain-containing protein 10 [Cucurbita argyrosperma subsp. arg...	[more]

BLAST of CmUC06G112620 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q5EB97	1.1e-06	39.18	Zinc finger CCHC domain-containing protein 10 OS=Rattus norvegicus OX=10116 GN=Z...	[more]
Q9CX48	1.5e-06	39.63	Zinc finger CCHC domain-containing protein 10 OS=Mus musculus OX=10090 GN=Zcchc1...	[more]
Q8TBK6	3.6e-05	34.09	Zinc finger CCHC domain-containing protein 10 OS=Homo sapiens OX=9606 GN=ZCCHC10...	[more]

BLAST of CmUC06G112620 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJ33	1.1e-113	96.21	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249870 PE=4 SV=1	[more]
A0A1S3CDQ2	1.3e-111	94.70	zinc finger CCHC domain-containing protein 10 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A5A7TW64	1.3e-111	94.70	Zinc finger CCHC domain-containing protein 10 OS=Cucumis melo var. makuwa OX=119...	[more]
A0A6J1H6H5	6.9e-108	92.91	zinc finger CCHC domain-containing protein 10-like OS=Cucurbita moschata OX=3662...	[more]
A0A6J1L1Z2	2.9e-106	92.91	zinc finger CCHC domain-containing protein 10 OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of CmUC06G112620 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G49400.1	2.3e-71	65.60	zinc knuckle (CCHC-type) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13917	zf-CCHC_3	coord: 101..138 e-value: 3.1E-20 score: 71.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 122..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..215
IPR039715	Zinc finger CCHC domain-containing protein 10	PANTHER	PTHR13491	ZCCHC10 PROTEIN	coord: 10..261
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 100..122

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC06G112620.1	CmUC06G112620.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding