Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTATCAAGAGTAGGTGTTTTTAGAGATGTTGTTGGATTTGGGTTAGTTGGAACGAGCCTCTTGGTGTCCAAAGATAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCAATTGGAACAAGTCGTTTCCTACCTAAAGTCAATGGAGGACTTTCAGGAGAGGTTGCTGGATTTGGGCCGGTTGGGACAAGTCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCTGGAGATGTTGCTAGATTTGGACCAGTTGGAACGAGTCGCTTTGTGCCTAAAGTCAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGTTTCCTACCTAAAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGCTTTGTACCTAAAGTCAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGGACAAGCCTTTTGATGCTCGAAGATAATGGAGGGCTTTCCGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGTTTCCTACCTAAAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGCCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGGTATGTTGCTGGATTTGGGCCAATTGGGACACGCCTTTTAGTGCCCAAAAATAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGCCGCTTTATGCCTAAAGTCAATGGAGGACTTTCAGGGGATGTTGCTGGATTTGGGCCAGTTGGAACAAGTCTCTTGGTGCCCAAAGATAATGGAGGGCTTTCAAGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCTCTTTGCGACTAAAGTCAATTGAGGACTTTCAAGGGATGTTGCTGGATTTGGGCCGGTTGGAACAAGCCTCTTGGTGCCCAAAGATAATTGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGCCTCTTGGTACTCAAAGATAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGGACACATCTTTTGGTGCCCAAAAATATTGGAGAACTTTCAGGAGATGTTGCTAGATTTGGTCTAGTCGGTGGTATAGATCTTTTGAGACCTAACGAAAGCTCATCACCCTTTTCATTCCACCTTGCTTCCACACTATTTAGATATGAAGGCACAAGAACCAAAGAAACGAACAAGAATGCATGA
mRNA sequence
ATGCTATCAAGAGTAGGTGTTTTTAGAGATGTTGTTGGATTTGGGTTAGTTGGAACGAGCCTCTTGGTGTCCAAAGATAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCAATTGGAACAAGTCGTTTCCTACCTAAAGTCAATGGAGGACTTTCAGGAGAGGTTGCTGGATTTGGGCCGGTTGGGACAAGTCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCTGGAGATGTTGCTAGATTTGGACCAGTTGGAACGAGTCGCTTTGTGCCTAAAGTCAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGTTTCCTACCTAAAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGCTTTGTACCTAAAGTCAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGGACAAGCCTTTTGATGCTCGAAGATAATGGAGGGCTTTCCGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGTTTCCTACCTAAAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGCCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGGTATGTTGCTGGATTTGGGCCAATTGGGACACGCCTTTTAGTGCCCAAAAATAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGCCGCTTTATGCCTAAAGTCAATGGAGGACTTTCAGGGGATGTTGCTGGATTTGGGCCAGTTGGAACAAGTCTCTTGGTGCCCAAAGATAATGGAGGGCTTTCAAGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGCCTCTTGGTACTCAAAGATAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGGACACATCTTTTGGTGCCCAAAAATATTGGAGAACTTTCAGGAGATGTTGCTAGATTTGGTCTAGTCGGTGGTATAGATCTTTTGAGACCTAACGAAAGCTCATCACCCTTTTCATTCCACCTTGCTTCCACACTATTTAGATATGAAGGCACAAGAACCAAAGAAACGAACAAGAATGCATGA
Coding sequence (CDS)
ATGCTATCAAGAGTAGGTGTTTTTAGAGATGTTGTTGGATTTGGGTTAGTTGGAACGAGCCTCTTGGTGTCCAAAGATAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCAATTGGAACAAGTCGTTTCCTACCTAAAGTCAATGGAGGACTTTCAGGAGAGGTTGCTGGATTTGGGCCGGTTGGGACAAGTCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCTGGAGATGTTGCTAGATTTGGACCAGTTGGAACGAGTCGCTTTGTGCCTAAAGTCAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGTTTCCTACCTAAAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGCTTTGTACCTAAAGTCAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGGACAAGCCTTTTGATGCTCGAAGATAATGGAGGGCTTTCCGGAGATGTTGCTGGATTTGGGCCAGTTGGAACGAGTCGTTTCCTACCTAAAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGCCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGGTATGTTGCTGGATTTGGGCCAATTGGGACACGCCTTTTAGTGCCCAAAAATAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGCCGCTTTATGCCTAAAGTCAATGGAGGACTTTCAGGGGATGTTGCTGGATTTGGGCCAGTTGGAACAAGTCTCTTGGTGCCCAAAGATAATGGAGGGCTTTCAAGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGTCGCTTTGTGCCTAAAGTCAATGGAGGACTTTCAGGAGATGTTGCTGGATTTGGGCCGGTTGGAACAAGCCTCTTGGTACTCAAAGATAATGGAGGGCTTTCAGGAGATGTTGCTGGATTTGGGCCAGTTGGGACACATCTTTTGGTGCCCAAAAATATTGGAGAACTTTCAGGAGATGTTGCTAGATTTGGTCTAGTCGGTGGTATAGATCTTTTGAGACCTAACGAAAGCTCATCACCCTTTTCATTCCACCTTGCTTCCACACTATTTAGATATGAAGGCACAAGAACCAAAGAAACGAACAAGAATGCATGA
Protein sequence
MLSRVGVFRDVVGFGLVGTSLLVSKDNGGLSGDVAGFGPIGTSRFLPKVNGGLSGEVAGFGPVGTSRFVPKVNGGLSGDVARFGPVGTSRFVPKVNGGLSGDVAGFGPVGTSRFLPKVNGGLSGDVAGFGPVGTSRFVPKVNGGLSGDVAGFGPVGTSLLMLEDNGGLSGDVAGFGPVGTSRFLPKVNGGLSGDVAGFGPVGTSRFVPKVNGGLSGYVAGFGPIGTRLLVPKNNGGLSGDVAGFGPVGTSRFMPKVNGGLSGDVAGFGPVGTSLLVPKDNGGLSRDVAGFGPVGTRDVAGFGPVGTSRFVPKVNGGLSGDVAGFGPVGTSLLVLKDNGGLSGDVAGFGPVGTHLLVPKNIGELSGDVARFGLVGGIDLLRPNESSSPFSFHLASTLFRYEGTRTKETNKNA
Homology
BLAST of CmUC06G111900 vs. NCBI nr
Match:
XP_023536219.1 (collagen alpha-2(I) chain-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 548.5 bits (1412), Expect = 4.9e-152
Identity = 285/427 (66.74%), Postives = 324/427 (75.88%), Query Frame = 0
Query: 6 GVFRDVVGFGLVGTSLLVSKDNGGLSGDVAGFGPIGTSRFLPKVNGGLSGEVAGFGPVGT 65
G+ DVVGFG VGT LLV K GGLSGDVAGFGP+GT F+P+ NGG+SG+VAGFGPVGT
Sbjct: 30 GLSGDVVGFGPVGTRLLVPKLEGGLSGDVAGFGPVGTRLFMPRPNGGISGDVAGFGPVGT 89
Query: 66 SRFVPKVNGGLSGDVARFGPVGTSRFVPKVNGGLSGDVAGFGPVGTSRFLPKVNGGLSGD 125
FVP+ NGG+SGDVA FGPVGT F+ + NGG+SGDVAGFGPVGT +PK+ GGLSGD
Sbjct: 90 RLFVPRPNGGVSGDVAGFGPVGTRLFMTRPNGGVSGDVAGFGPVGTRLLVPKLEGGLSGD 149
Query: 126 VAGFGPVGTSRFVPKVNGGLSGDVAGFGPVGTSLLMLEDNGGLSGDVAGFGPVGTSRFLP 185
VAGFGPVGT VP+ NGG+SGDVAGFGPVGT L + NGG+SGDVAGFGPVGT +P
Sbjct: 150 VAGFGPVGTRLLVPRPNGGISGDVAGFGPVGTRLFVPRPNGGVSGDVAGFGPVGTRLLVP 209
Query: 186 KVNGGLS---------GDVAGFGPVGTSRFVPKVNGGLSGYVAGFGPIGTRLLVPKNNGG 245
+ NGG+S GDVAGFGPVGT FVP+ NGG+SG VAGFGP+GTRL +P+ NGG
Sbjct: 210 RPNGGISGDVAGFGPVGDVAGFGPVGTRLFVPRHNGGVSGDVAGFGPVGTRLFMPRPNGG 269
Query: 246 LSGDVAGFGPVGTSRFMPKVNGGLSGDVAGFGPVGTSLLVPKDNGGLSRDVAGFGPVGTR 305
+SGDVAGFGPVGT F+P+ NGG+SGDVAGFGPVGT L VP+ NGG+S DVAGFGPVGTR
Sbjct: 270 VSGDVAGFGPVGTRLFVPRPNGGVSGDVAGFGPVGTRLFVPRPNGGVSGDVAGFGPVGTR 329
Query: 306 ------------DVAGFGPVGTSRFVPKVNGGLSGDVAGFGPVGTSLLVLKDNGGLSGDV 365
DV GFGPVGT VP NGG+SGDVAGFGPVGT L V + NGG+SGDV
Sbjct: 330 LLVPKLEGGLSGDVVGFGPVGTRLLVPGRNGGVSGDVAGFGPVGTRLFVPRPNGGVSGDV 389
Query: 366 AGFGPVGTHLLVPKNIGELSGDVARFGLVGGIDLLRPNESSSPFSFHLASTLFRYEGTRT 412
AGFGPVGT LLVP+ G +SGDVA FG+V G LLRP ES+ P S H AS R +
Sbjct: 390 AGFGPVGTRLLVPRPNGGISGDVAGFGIV-GTRLLRPKESTLPLSSHFASRPLRLDKIPI 449
BLAST of CmUC06G111900 vs. NCBI nr
Match:
XP_038902390.1 (spidroin-1-like [Benincasa hispida])
HSP 1 Score: 342.4 bits (877), Expect = 5.3e-90
Identity = 194/279 (69.53%), Postives = 201/279 (72.04%), Query Frame = 0
Query: 73 NGGLSGDVARFGPVGTSRFVPKVNGGLSGDVAGFGPVGTSRFLPKVNGGLSGDVAGFGPV 132
N LS V FGPVG S VPK NG L DV GFGP T + + N LSGDVAGFGP
Sbjct: 3 NRELSRYVTGFGPVGMSHLVPKDNGELLQDVTGFGPFRTRLLVSQNNRALSGDVAGFGPF 62
Query: 133 GTSRFVPKVNGGLSGDVAGFGPVGTSLLMLEDNGGLSGDVAGFGPVGTSRFLPKVNGGLS 192
GTS + K NGGLSG V G LML+ NGGL GDV GFG G S +PK N
Sbjct: 63 GTS--LAKGNGGLSGYVTGL-----DFLMLKHNGGLVGDVTGFGSFGMSLLVPKDN---E 122
Query: 193 GDVAGFGPVGTSRFVPKVNGGLSGYVAGFGPIGTRLLVPKNNGGLSGDVAGFGPVGTSRF 252
GD AGFGP GTSRFVPK NGGLSG VAGFG +GT VPK NGGLSGDV GFGPVGTS F
Sbjct: 123 GDFAGFGPAGTSRFVPKFNGGLSGDVAGFGTVGTSRFVPKVNGGLSGDVVGFGPVGTSCF 182
Query: 253 MPKVNGGLSGDVAGFGPVGTSLLVPKDNGGLSRDVAGFGPVGTRDVAGFGPVGTSRFVPK 312
MPKVNGGLSGDVAGFGP+GTSLLVPK NGGLS DVAGFG VGTS FVPK
Sbjct: 183 MPKVNGGLSGDVAGFGPIGTSLLVPKVNGGLS-----------GDVAGFGLVGTSHFVPK 242
Query: 313 VNGGLSGDVAGFGPVGTSLLVLKDNGGLSGDVAGFGPVG 352
VNGGLSGDVAGFGPVGTSLLVLKDNG LSGDVAGFGPVG
Sbjct: 243 VNGGLSGDVAGFGPVGTSLLVLKDNGKLSGDVAGFGPVG 260
BLAST of CmUC06G111900 vs. NCBI nr
Match:
KAF3551098.1 (hypothetical protein DY000_02005191 [Brassica cretica])
HSP 1 Score: 218.4 bits (555), Expect = 1.2e-52
Identity = 159/378 (42.06%), Postives = 212/378 (56.08%), Query Frame = 0
Query: 28 GGLSGDVAGFGPIGTSRFLPKVN---GGLSGEVAGFGPVGTSRFVPKVN---GGLSGDVA 87
GG GDV+ FG +GT+ F PK GG G+V+ FGP+GT+ F PK GG GDV+
Sbjct: 6 GGEGGDVSLFGLLGTNLFTPKFAMECGGEGGDVSLFGPLGTNLFTPKSAMECGGEGGDVS 65
Query: 88 RFGPVGTSRFVPKVN---GGLSGDVAGFGPVGTSRFLPK--VNGGLSGDVAGFGPVGTSR 147
FGP+GT+ F PK GG SG+V+ FGP+GT+ F PK + G GDV+ FGP+GT+
Sbjct: 66 LFGPLGTNLFTPKSAMECGGESGEVSLFGPLGTNLFTPKFAIECGEGGDVSLFGPLGTNL 125
Query: 148 FVPKVNGGLSGDVAGFGPVGTSLLMLEDNGGLSGDVAGFGPVGTSRFLPKVN---GGLSG 207
F PK G+ G G GDV+ FGP+GT+ F PK GG G
Sbjct: 126 FSPKSAMECGGEECGEG----------------GDVSLFGPLGTNLFSPKSAMECGGEGG 185
Query: 208 DVAGFGPVGTSRFVPKVN---GGLSGYVAGFGPIGTRLLVPKNN---GGLSGDVAGFGPV 267
DV+ FGP+GT+ F PK G + G V+ FGP+GT L PK+ GG GDV+ FGP+
Sbjct: 186 DVSLFGPLGTNLFTPKSPMECGRVGGDVSLFGPLGTNLFTPKSAIKCGGEGGDVSLFGPL 245
Query: 268 GTSRFMPKVN---GGLSGDVAGFGPVGTSLLVPKDNGGLSRDVAGFGPVGTRDVAGFGPV 327
GT+ F P + GG G+V+ FG +GT+L PK + + G G DV+ FGP+
Sbjct: 246 GTNLFTPISSMECGGEGGEVSLFGLLGTNLFTPKS----AMECGGEG----GDVSLFGPL 305
Query: 328 GTSRFVPKVN---GGLSGDVAGFGPVGTSLLVLKDN---GGLSGDVAGFGPVGTHLLVPK 375
GT+ F + GG GDV+ GP+GT+ L + G GDV+ FGP+GT+L +P
Sbjct: 306 GTNLFTLVSSMKCGGEGGDVSLLGPLGTNFFTLVSSMKCVGEGGDVSLFGPLGTNLFIPI 359
BLAST of CmUC06G111900 vs. NCBI nr
Match:
XP_024199882.1 (collagen alpha-2(I) chain-like [Rosa chinensis])
HSP 1 Score: 217.6 bits (553), Expect = 2.0e-52
Identity = 158/366 (43.17%), Postives = 189/366 (51.64%), Query Frame = 0
Query: 10 DVVGFGLVGTSLLVSKDNGGLSGDVAGFGPIGTSRFLPKVNGGLSGEVAGFGPVGTSRFV 69
D +G G VGT + + G+ GD G GPIGT NGG+ G+ G GPVGT R
Sbjct: 56 DFIGLGPVGT-----RRDVGVLGDFVGLGPIGTRP--ETFNGGVPGDFVGLGPVGTRR-- 115
Query: 70 PKVNGGLSGDVARFGPVGTSRFVPKVNGGLSGDVAGFGPVGTSRFLPKVNGGLSGDVAGF 129
+G D FG V T R +GG+ D G GPV T R NGG+ GD+ G
Sbjct: 116 ---DGDALRDFVGFGLVSTCR-----DGGVPRDFVGLGPVCTLR-----NGGVLGDLVGL 175
Query: 130 GPVGTSRFVPKVNGGLSGDVAGFGPVGTSLLMLEDNGGLSGDVAGFGPVGTSRFLPKVNG 189
GPVGT R NGG+ GD G GPVGT NGG+ GD GFGPVGT R +G
Sbjct: 176 GPVGTRR-----NGGVPGDFVGLGPVGT-----RRNGGVPGDFVGFGPVGTRR-----DG 235
Query: 190 GLSGDVAGFGPVGTSRFVPKVNGGLSGYVAGFGPIGTRLLVPKNNGGLSGDVAGFGPVGT 249
+ D GFG VGT R +GG+ G G GP+GTR NGG+ GD+ G GPVGT
Sbjct: 236 DVPRDFVGFGLVGTCR-----DGGVPGDFVGLGPVGTR-----RNGGVPGDLVGLGPVGT 295
Query: 250 SRFMPKVNGGLSGDVAGFGPV--------GTSLLVPKDNGGLSRDVAGFGPVGTR----- 309
R NGG+ GD GFGPV G S + + +GG+ RD G G VGTR
Sbjct: 296 RR-----NGGVPGDFVGFGPVGGVPRVFEGLSPVRTRCDGGIPRDFVGLGLVGTRCDGGV 355
Query: 310 --DVAGFGPVGTSRFVPKVNGGLSGDVAGFGPVGTSLLVLKDNGGLSGDVAGFGPVGTHL 361
D GFG VGT N G+ GD GFGP+GT NGG+ GD FGPVG +
Sbjct: 356 SGDFVGFGVVGTCH--ETFNSGVPGDFVGFGPIGTRRETF--NGGVPGDSVRFGPVGDEV 365
BLAST of CmUC06G111900 vs. NCBI nr
Match:
XP_017592953.1 (PREDICTED: uncharacterized PE-PGRS family protein PE_PGRS54-like, partial [Corvus brachyrhynchos])
HSP 1 Score: 151.0 bits (380), Expect = 2.3e-32
Identity = 138/430 (32.09%), Postives = 215/430 (50.00%), Query Frame = 0
Query: 5 VGVFRDVVGFGLVGTSLLVS--KDNG--GLSGDVAGFGPIGTSRFLPKVNG----GLSGE 64
+GV D+ GFG +G + D G G+SGD+ GFG IG + + G+SG+
Sbjct: 157 IGVSGDMRGFGDIGDIEGIGGIGDFGDIGVSGDMRGFGDIGDIEGIGGIGDFGDIGVSGD 216
Query: 65 VAGFGPVGTSRFVPKVNG----GLSGDVARFGPVGTSRFVPKVNG----GLSGDVAGFGP 124
+ GFG +G + + G+SGD+ FG +G + + G+SGD+ GFG
Sbjct: 217 MRGFGDIGDIEGIGGIGDFGDIGVSGDMRGFGDIGDIEGIGGIGDFGDIGVSGDMRGFGD 276
Query: 125 VGTSRFLPKVNG----GLSGDVAGFGPVGTSRFVPKVNG----GLSGDVAGFGPVG--TS 184
+G + + G+SGD+ GFG +G + + G+SGD+ GFG +G
Sbjct: 277 IGDIEGIGGIGDFGDIGVSGDMRGFGDIGDIEGIGGIGDFGDIGVSGDMRGFGDIGDIEG 336
Query: 185 LLMLEDNG--GLSGDVAGFGPVGTSRFLPKVNG----GLSGDVAGFGPVGTSRFVPKVNG 244
+ + D G G+SGD+ GFG +G + + G+SGD+ GFG +G + +
Sbjct: 337 IGGIGDFGDIGVSGDMRGFGDIGDIEGIGGIGDFGDIGVSGDMRGFGDIGDIEGIGGIGD 396
Query: 245 ----GLSGYVAGFGPI----GTRLLVPKNNGGLSGDVAGFGPVGTSRFMPKVNG----GL 304
G+SG + GFG I G + + G+SGD+ GFG +G + + G+
Sbjct: 397 FGDIGVSGDMRGFGDIGDIEGIGGIGDFGDIGVSGDMRGFGDIGDIEGIGGIGDFGDIGV 456
Query: 305 SGDVAGFGPVG--TSLLVPKDNG--GLSRDVAGFGPVGTRDVAGFGPVGTSRFVPKVNGG 364
SGD+ GFG +G + D G G+S D+ GFG +G D+ G G +G + G
Sbjct: 457 SGDMRGFGDIGDIEGIGGIGDFGDIGVSGDMRGFGDIG--DIEGIGGIGDFGDI-----G 516
Query: 365 LSGDVAGFGPVG--TSLLVLKDNG--GLSGDVAGFGPVGTHLLVPKNIGE-----LSGDV 378
+SGD+ GFG +G + + D G G+SGD+ GFG +G + IG+ +SGD+
Sbjct: 517 VSGDMRGFGDIGDIEGIGGIGDFGDIGVSGDMRGFGDIG-DIEGIGGIGDFGDIGVSGDM 576
BLAST of CmUC06G111900 vs. ExPASy TrEMBL
Match:
A0A7H2WHG0 (Uncharacterized protein OS=Acinetobacter seifertii OX=1530123 GN=IC772_02510 PE=4 SV=1)
HSP 1 Score: 134.4 bits (337), Expect = 1.1e-27
Identity = 149/448 (33.26%), Postives = 207/448 (46.21%), Query Frame = 0
Query: 5 VGVFRDVVGFGLVGTSLLVSKDNGGLSGDVAGFGPI--------GTSRFLPKVNGGLSGE 64
VG D++G G+ GT + GGL+G V G P+ G + + + GGL+G
Sbjct: 191 VGAVTDILG-GVTGT---IGGLTGGLTGGVTGGNPVGAVTDILGGVTGTIGGLTGGLTGG 250
Query: 65 VAGFGPV--------GTSRFVPKVNGGLSGDVARFGPV--------GTSRFVPKVNGGLS 124
V G PV G + + + GGL+G V PV G + + + GGL+
Sbjct: 251 VTGGNPVGAVTDILGGVTGTIGGLTGGLTGGVTGGNPVGAVTDILGGVTGTIGGLTGGLT 310
Query: 125 GDVAGFGPV--------GTSRFLPKVNGGLSGDVAGFGPV--------GTSRFVPKVNGG 184
G V G PV G + + + GGL+G V G PV G + + + GG
Sbjct: 311 GGVTGGNPVGAVTDILGGVTGTIGGLTGGLTGGVTGGNPVGAVTDILGGVTGTIGGLTGG 370
Query: 185 LSGDVAGFGPVGTSLLMLED--------NGGLSGDVAGFGPVG-TSRFLPKVN---GGLS 244
L+G V G PVG +L GGL+G V G PVG + L V GGL+
Sbjct: 371 LTGGVTGGNPVGAVTDILGGVTGTIGGLTGGLTGGVTGGNPVGAVTDILGGVTGTIGGLT 430
Query: 245 GDVAGFGPVGTSRFVPKVNGGLSGYVAGF-------GPIG--TRLL--VPKNNGGLSGDV 304
G + G P+GT V + GG++G + G P+G T +L V GGL+G V
Sbjct: 431 GGLTGGNPLGT---VTDILGGVTGTIGGLTSGVTDGNPLGTVTDILGGVTGTIGGLTGGV 490
Query: 305 AGFGPVGT-SRFMPKVN---GGLSGDVAGFGPVG--TSLL--VPKDNGGLSRDVAGFGPV 364
G P+GT + + V GGL+G V G P+G T +L V GGL+ V G P+
Sbjct: 491 TGGNPLGTVTDILGGVTGTIGGLTGGVTGGNPLGTVTDILGGVTGTIGGLTGGVTGGNPL 550
Query: 365 GT-RDVAGFGPVGTSRFVPKVNGGLSGDVAGFGPVGTSLLVL----KDNGGLSGDVAGFG 377
GT D+ G G GT GGL+G V G P+GT +L GGL+G V G
Sbjct: 551 GTVTDILG-GVTGTI-------GGLTGGVTGGNPLGTVTDILGGVTSTIGGLTGGVTGGN 610
BLAST of CmUC06G111900 vs. ExPASy TrEMBL
Match:
A0A140QVL5 (Putative outer membrane protein A (Fragment) OS=Acinetobacter sp. 216872 OX=1310734 GN=J633_1754 PE=4 SV=1)
HSP 1 Score: 127.9 bits (320), Expect = 9.9e-26
Identity = 106/292 (36.30%), Postives = 152/292 (52.05%), Query Frame = 0
Query: 6 GVFRDVVGFGLVGTSLL------VSKDNGGLSGDVAGFGPIGTSRFLPKVNGGLSGEVAG 65
G+ +V G T +L V+ GG++G G P+GT + + GGL+G G
Sbjct: 11 GIVNTLVSNGTTATGILTDILGGVTGAIGGVTGGTTGGNPLGT---VTDIIGGLTGGATG 70
Query: 66 FGPVGTSRFVPKVNGGLSGDVARFGPVGTSRFVPKVNGGLSGDVAGFGPVGTSRFLPKVN 125
P+G+ V + GGL+G V P+GT V + GGL+G G P+GT + +
Sbjct: 71 GNPLGS---VTDIIGGLTGGVTGGNPLGT---VTDIIGGLTGGATGGNPLGT---VTDII 130
Query: 126 GGLSGDVAGFGPVGTSRFVPKVNGGLSGDVAGFGPVGTSLLMLEDNGGLSGDVAGFGPVG 185
GGL+G V G P+GT V + GGL+G G P+GT + + GGL+G V G P+G
Sbjct: 131 GGLTGGVTGGNPLGT---VTDIIGGLTGGATGGNPLGT---VTDIIGGLTGGVTGGNPLG 190
Query: 186 TSRFLPKVNGGLSGDVAGFGPVGTSRFVPKVNGGLSGYVAGFGPIGTRLLVPKNNGGLSG 245
T + + GGL+G G P+GT V + GGL+G V G P+GT V GG++G
Sbjct: 191 T---VTDIIGGLTGGATGGNPLGT---VTDIIGGLTGGVTGGNPLGT---VTDIIGGVTG 250
Query: 246 DVAGFGPVGTSRFMPKVNGGLSGDVAGFGPVGTSLLVPKDNGGLSRDVAGFG 292
V G P+GT + + GGL+G V G P+GT V GG++ + G G
Sbjct: 251 GVTGGNPLGT---VTDIIGGLTGGVTGGNPLGT---VTDIIGGVTGGIIGGG 269
BLAST of CmUC06G111900 vs. ExPASy TrEMBL
Match:
A0A7H2NMM7 (Uncharacterized protein OS=Acinetobacter seifertii OX=1530123 GN=IC799_02340 PE=4 SV=1)
HSP 1 Score: 126.3 bits (316), Expect = 2.9e-25
Identity = 138/439 (31.44%), Postives = 205/439 (46.70%), Query Frame = 0
Query: 5 VGVFRDVVGFGLVGTSLLVSKDNGGLSGDVAGFGPI--------GTSRFLPKVNGGLSGE 64
VG D++G G+ GT + GGL+G V G P+ G + + V GGL+G
Sbjct: 96 VGAVTDILG-GVTGT---IGGLTGGLTGGVTGGNPVGAVTNILGGVTGTIGGVTGGLTGG 155
Query: 65 VAGFGPVGT--------SRFVPKVNGGLSGDVARFGPV--------GTSRFVPKVNGGLS 124
V G PVGT + + + GL+G V PV G + + + GGL+
Sbjct: 156 VTGGNPVGTVTDILGGVTGTIGGLTSGLTGGVTGGNPVGAVTNILGGVTGTIGGLTGGLT 215
Query: 125 GDVAGFGPVGT--------SRFLPKVNGGLSGDVAGFGPVGTSRFVPKVNGGLSGDVAGF 184
G V G PVGT + + + GGL+G V G PVG V + GG++G + G
Sbjct: 216 GGVTGGNPVGTVTDILGGVTGTIGGLTGGLTGGVTGGNPVGA---VTNILGGVTGTIGGL 275
Query: 185 -----------GPVG--TSLL--MLEDNGGLSGDVAGFGPVGTSRFLPKVNGGLSGDVAG 244
PVG T +L + GGL+G V G P+GT + ++ GG++G G
Sbjct: 276 TGGVTGGATSGNPVGAVTDILGGVTGTIGGLTGGVTGGNPLGT---VTEIIGGVTGGATG 335
Query: 245 FGPVGTSRFVPKVNGGLSGYVAGFGPIG--TRLL--VPKNNGGLSGDVAGFGPVGTSRFM 304
P+GT V + GG++G AG P+G T ++ V GG++G G P+GT +
Sbjct: 336 GNPLGT---VTDIIGGVTGGAAGGNPLGAVTNIIGGVTGAIGGVTGGATGGNPLGT---V 395
Query: 305 PKVNGGLSGDVAGFGPVG--TSLL--VPKDNGGLSRDVAGFGPVG---------TRDVAG 364
+ GG++G AG P+G T+++ V GG++ G P+G T AG
Sbjct: 396 TDIIGGVTGGAAGGNPLGAVTNIIGGVTGAIGGVTGGATGGNPLGTVTDIIGGVTGGAAG 455
Query: 365 FGPVGTSRFVPKVNGGLS---GDVAGFGPVGTSLLVLKD-NGGLSGDVAGFGPVGTHLLV 376
P+G V + GG++ G V G G L + D GG++G AG P+GT V
Sbjct: 456 GNPLGA---VTNIIGGITGAIGSVTGGATGGNPLGTVTDIIGGVTGGAAGGNPLGT---V 507
BLAST of CmUC06G111900 vs. ExPASy TrEMBL
Match:
A0A6D2JGR3 (Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS23799 PE=4 SV=1)
HSP 1 Score: 118.6 bits (296), Expect = 6.0e-23
Identity = 120/323 (37.15%), Postives = 143/323 (44.27%), Query Frame = 0
Query: 56 EVAGFGPVGTSRFVPKVN-GGLSGDVARFGPVGTSRFV---PKVNGGLSGDVAGFGPVGT 115
E+ GPVGT RF P G L GDV+ PVGT F N L GDV GP+GT
Sbjct: 6 EMFQIGPVGTFRFAPSTKCGELGGDVSLLEPVGTILFASISAMKNDELGGDVLLLGPLGT 65
Query: 116 SRFL---PKVNGGLSGDVAGFGPVGTSRFV---PKVNGGLSGDVAGFGPVGTSLL----- 175
F L GDV G +GT F N G+ GDV+ GPV T L
Sbjct: 66 FFFASISAMKKDELGGDVLLSGLLGTVLFTSIFAMKNDGIDGDVSLLGPVETFLFPSISD 125
Query: 176 MLEDNGGLSGDVAGFGPVGTSRFL---PKVNGGLSGDVAGFGPVGTSRFV---PKVNGGL 235
M +D L GDV GP+GT F N GL GDV+ GPV T F L
Sbjct: 126 MKKDE--LGGDVLLSGPLGTVLFTSISAMKNDGLDGDVSLLGPVETFLFASISAMKKDEL 185
Query: 236 SGYVAGFGPIGTRLLV---PKNNGGLSGDVAGFGPVGTSRF---MPKVNGGLSGDVAGFG 295
G V GP+GT L + N GL GDV+ GPVGT F L GDV G
Sbjct: 186 GGDVLLSGPLGTVLFISISAMKNDGLDGDVSLLGPVGTFLFASISAMKKDELGGDVLLSG 245
Query: 296 PVGTSLLV---PKDNGGLSRDVAGFGPVGTRDVAGFGPVGTSRFVPKVNGGLSGDVAGFG 346
P+GT L + N GL DV+ G VGT + + L GDV G
Sbjct: 246 PLGTVLFISISAMKNDGLDGDVSLLGLVGTFLFPSISAMKKDK--------LGGDVLLSG 305
BLAST of CmUC06G111900 vs. ExPASy TrEMBL
Match:
A0A7H2ZRB4 (Uncharacterized protein OS=Acinetobacter seifertii OX=1530123 GN=IC763_02435 PE=4 SV=1)
HSP 1 Score: 110.2 bits (274), Expect = 2.1e-20
Identity = 138/454 (30.40%), Postives = 196/454 (43.17%), Query Frame = 0
Query: 5 VGVFRDVVGFGLVGTSLLVSKDNGGLSGDVAGFGPI--------GTSRFLPKVNGGLSGE 64
VG D++ G+ GT + GGL+G V G P+ G + + + GGL+G
Sbjct: 96 VGTVTDILA-GVTGT---IGGLTGGLTGGVTGGNPVGAVTDILGGVTGTIGGLTGGLTGG 155
Query: 65 VAGFGPV--------GTSRFVPKVNGGLSGDVARFGPV--------GTSRFVPKVNGGLS 124
V G PV G + + + GGL+G V PV G + + + GGL+
Sbjct: 156 VTGGNPVGAVTDILGGVTGTIGGLTGGLTGGVTGGNPVGAVTDILGGVTGTIGGLTGGLT 215
Query: 125 GDVAGFGPVG-TSRFLPKVN---GGLSGDVAGFGPV--------GTSRFVPKVNGGLSGD 184
G V G PVG + L V GGL+G V G PV G + + + GGL+G
Sbjct: 216 GGVTGGNPVGAVTDILGGVTGTIGGLTGGVTGGNPVGAVTDILGGVTGTIGGLTGGLTGG 275
Query: 185 VAGFGPVGTSLLMLED--------NGGLSGDVAGFGPVG-TSRFLPKVN---GGLSGDVA 244
V G PVGT +L GGL+G V G PVG + L V GGL+G +
Sbjct: 276 VTGGNPVGTVTDILGGVTGTIGGLTGGLTGGVTGGNPVGAVTDILGGVTGTIGGLTGGII 335
Query: 245 GFGPVGTSRFVPKVNGGLSGYVAGFGPIGTRLL--------------VPKNNGGLSGDVA 304
G G S + V GG+ + G + T ++ +P+ ++ D+A
Sbjct: 336 GGGTSPISPVIDVVQGGID-ILQGVESLKTGIINTAINTVADTVVGVLPQTEHPVT-DIA 395
Query: 305 GFGPVGTSRFMPKVNGGL-------SGDVAGFGPVGTSLL-VPKDNG----GLSRDVAG- 364
G + VNG L GD+ G T +L +NG G+ D+ G
Sbjct: 396 HLGTLTFETSRDTVNGALETVSNLVGGDIQGATQSATGILGTLVNNGSTATGILTDILGG 455
Query: 365 -FGPVG--TRDVAGFGPVGTSRFVPKVNGGLSGDVAGFGPVGTSLLVL----KDNGGLSG 377
G +G T V G PVG V + GGL+G V G P+GT +L GGL+G
Sbjct: 456 VTGTIGGLTGGVTGGNPVGA---VTDILGGLTGGVTGGNPLGTVTDILGGVTGTIGGLTG 515
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A7H2WHG0 | 1.1e-27 | 33.26 | Uncharacterized protein OS=Acinetobacter seifertii OX=1530123 GN=IC772_02510 PE=... | [more] |
A0A140QVL5 | 9.9e-26 | 36.30 | Putative outer membrane protein A (Fragment) OS=Acinetobacter sp. 216872 OX=1310... | [more] |
A0A7H2NMM7 | 2.9e-25 | 31.44 | Uncharacterized protein OS=Acinetobacter seifertii OX=1530123 GN=IC799_02340 PE=... | [more] |
A0A6D2JGR3 | 6.0e-23 | 37.15 | Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS23799 ... | [more] |
A0A7H2ZRB4 | 2.1e-20 | 30.40 | Uncharacterized protein OS=Acinetobacter seifertii OX=1530123 GN=IC763_02435 PE=... | [more] |
Match Name | E-value | Identity | Description | |