CmUC06G110890 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC06G110890
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Protein TIC 20
Location	CmU531Chr06: 3285930 .. 3291908 (+)
RNA-Seq Expression	CmUC06G110890
Synteny	CmUC06G110890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCCAAGCGAGAAGCGAGACCTGAGCGAGAGCGCGAGAGCCAAGACAGCGAAACCGGCGAGAGAGCGAGAGTCTGCAGGCTGGGGCGACACTGGCGCGGGGGAAAACGTGAGTCGAGCGGGAGAGCGAGAGCGCGAGACAGCGGGAGAGCGAGAGCGCGAGACAGCGGGAGAGCGAGAGCTAGCGAGAGAGCAACACCACGAGAGTGACTGAGCAATTGGGCGCGGGAGACCGTGAGGTGATGGGAAGAAAGTGAGAGCGGGAGAGCGAGACGGTTAGCGAGAGTTGAATGCCGACAGCGACACTCACGGCGAAATCCGCGACACCCGACGCGTGAAACCTCCGGAGATTCCCGAAAACTGAAGGAGAGCGAGAGAGAGAGATGTCGCGGTAGAGGAAGTTGGCGGCGGCTGTGGCGGCGGCGAAAGGGAGAGGAAAGGAGGTGCGGCGGAGAGAACGAGAGAGAGAGTTATTATTTTCTTTCTTTTTCTTTTGACTGCACGAAAAACGAGGTAATTCCTCTCCCCCTTAAACCCTAATTTTTCCCAATTCTCCCCTTTTACTCAATAAGGTAAAAATATTATCCTTCATTTACCAAATTAATTTATTTTTATTCTATTTGCCCTAAAATAGAATAAGAATAAATTATTCTTTACCAAATCTAACATTTTCCTTAATCTCATCTTCAATTCTCCTACCACCATAAATAAAATCCTTGGGACTTTCCTATTTAACTTAAGTAATTACCATAATGTAAATAAATAATTAAAAATTCCTTTTTATGCAAAATAACTTAATTTAATTGGTTAGGGGAAAATTACCTCAAAGGTTTGGGGTTGTTACACTTTCAATAGTTTATCACTAATATATATATATGAATGATAGATCATTCTATGTTCATCATTGATAGATTTCTATCAATTATCAACAATTTTTATGTCTATTGTTGATGAGCAATTTTATGTATATTACCGAGAGACTATTAATATAGCTATTAGTAATGAACTATGAATAACTAATTCGGTGGAAATGAGTTGTTGCATGGTTAAAAGTTATTTTTGGTGATTCCAACACCTTTAGGGGCAATTAGGTCTTTTTAATTAAGAACTAATTGTATTTTTAATTGTGCGTGAAACGCAATTTTTGCTACAATGCGACCGTATTGTGCCCTAAACTGGGTCAATCAGAATCTTCGCAACCAATTCAAAGCTTTCTGATTTTCAATTCTTTATGTGTTTCGTCTGCTCTAATACTAACTAGGATTTCTTGGAAAAATCTCGAGAAGTACCCACTTAGAGTTGAGAAGCTAGAAACTTCCGCTACTTCAATTCAGTCTATTTAAAGTGCCAAAGGCATCATTTTGGGAGAACCAAACCTTGAGCCAAAATTTGCACTTAGAGTTGAGAAGCTAGAAACTTCCACTACTTCAAGAATGAGAGTTCCTAGTCCAAACCTTGACTTAGAAAGAGTGTTGTAAGTGAGAATCACCTCGAGAAAGATTGAATCGAACTAAGAGAAAACCTTAAAAGTATAGAAATTGTCCTAAGAGTCACATATTCTAATTTCCCATATTTCTAGTTGTTGTCCTTTGTTCTTTGTTCTTTTCTATTCTTTTTTTATTTTTTTTTTTTCATCTTATACTTGTGAATTTTGTTTTAATGAAGTTACTATTATTCTTTTTTATTATGAGCTAAATTCTTTAAGATATTCGGTCTAATGGATGTGCGAGAAAATATAGATTAGCTTGAAAAATTATGAAGCATTATACTCTAACTATTTCTTTTGTTAAAAATCATGTTGTATCTAATTAATTTAAAGTGGTAATTTAAGTTAGCATGCTAGTTGAACCATTGTAAGAAGGTAAAGGCAATATATGAAGTTCACAAAAGAATATGAGAATAAGAGTTGAACATAGGATGTCATATGACTTTACACATAAGGCACGTCGTAGGACTAAAAGATTATATGTAATTAGTCATAGTTTGAAAGGCACCGAGGTTGCAATGCAGTCACGATGTTTAAGACATTTTTCCTAAGGGTTAAAACTTGACGTGAATCCTTTATCAATTTACATAATTAACACAATTAAGATATACCATCAAAATGAGATAAAAAATTAAAAATTTTACACAATGATCACCAAAACTTAAATCAAATTATCAAAATTAAACTAATCAAATGAAAACAACTCTAAGTCAAAACGAAACAAAAAAAAATAATAATATTTACCATAATCGAACAAACAATATCCACCACAACGCAATTAAAGTTAGGGGCAATTGCAAATATGACAATCAAACCCAAAATGTTAGCATATATAGCATAATGGAAAAAAAATGTAGATATAGCAAAATCTAGATCCAGCTTTGTGATTTTATCCGTGATAGAACACATCGTTGGTAGAAGTCTATTAATGATAAAGTCTATCACTAGTAGAAGTCTATTAGTTATAAAGTCTATAACAAAATATCACCAAATAGACTATAATAAATTGTGATAGACACATATAATAATATATCGAAGTTTATCCGGTATATATATTTGTAATATTTTAATTGATTTTCCAAGATTCCTATTTCTAAATCATTTTCAAGTTTTAATTGAATTTAAAGTGTAATTTAAAATTAGGAAGAAAGAAAGAAAATAGTGAGAAAAAGCGTCGTATTTCATTTCAAAAAAAAAAAAAAAATCGAGACAAAACCCTATCCCTCATCCCTTTCTTCTCTCTGCTGCTGGCCTCCGAAAAACGCACTACGGCGTGATTACGGCACAGCTGCCCGCGGGCTTGAAGGTTGTGCGGCGAGGCCCACAAGCACCACCGCCCCTATCCAGCCATCAGAGATTTCAGCAAAGTAATTTATCACCTGAGGCAACATTCGGCAGCTATCCACTACCCGAATGGCCCCAAATCGGATTCCCCATAACCTGTAGAAGTCAGGTTTGTGAGTTCGAACCTATTCGAATACATTTCAGCAGAGCCTACATTTTTGGATTAGTGGGTAGACTCTTTTCGAGTGTATTAAATCTGATTCTAACCATTGGGACTTATGTATAAAGGTTCGGATTGCGCGATTCAAGTTTAAGATTGATATTGGGTAAGAGATAGTTGTCTTCACGCTCTTGCAGATTCGATTCAATTAAGGTTTCAAACTGAATTTTAACCTTGGAATATTGTCTAGAATAACTTAACAGCGCTTTTGAAAGTGTAGTAAGTAGTTCTTGTGAAGTCTGTTTGCTGTTTGCTGTATGCTTTATATGCCTTGGTAAGTTTATGATATATAGAATTTCATTTGTATGCTACTAAAACTGTTATGTATTCTGGTCTGTGTAAATGTGCTATGATGTTGGGTTATGCCCTTGTGATGTTGAGCATGTTGGACGTTGAGAGTTTTTTTGCAACTATATGATAGTATGATATTTATGACGAAAACCTGCTCATGTTGTTTATGAGCTGAATTGTGGCCTAGAAAGCATGTATAAAATGTGCACACATGGGACATTGGGAGATTGATTGGCAAGAAATGGGTTAGAGGACCTTGAATATGTGATAAAGAAAATTGGGGAGAGTATCCGGGCCTTGGGCATAAATTGTCGATGGTTGGTATTGTGTTAAGAAAAGTAAATGAATATCATGGCCTCAAGTATGAAGGGTCGATGACTGGTGTGTCACTATTGGATGTCAAGGCCTTGGGTATAGATGGTCGAGAGTTGACATGCCAATATTGGATAAGAGGAGTATCAAAGCCTTGGGCTTGGGTATAGATTGTCGAGAGTCAGTGTGATGTGTCTTTGGATAAGTATTGGGGTCTTCGGTAGAAATGGGCAAGGTTTGGATGTTGAGTTCTGTGGAAAAGTGTTGAGGCTTTGGGTATGAATGGTCAAGAGTCAATGTGTAACGAAAGACTATGTCTTGAAGATGTAGAAATGATGGAATAAAGTTGAAAAGAGCAAGAGAGACATTGGAGAATTTAGCAAGGTGTGAGAGCTTGTTAGAGCTTGAGTTAGAGAATGGGTATGATATTATGCATGATGTAGAAATGAATCTGCATGATATTATTATGATAGTATGTGTCACAGGGTTGGCATCAAACTATAATTTGGGGTGTTACAGTATGCCACTTCAGGTTTGCTGTGACTTGTGAGAAGCATGAATCCATGTGTTGTGATATATGTTGTATGCTGTTGAAAGTTTAAGGTGAAAATTGATATAAATTCCCAAGTAAAATTAATTTCTTTTTCTTCCCAAATGACTAATTATCACTATGCCTTGCTTTTTGGTTTGTATGGGGCACCAATCTGGGTTTCTTTGATCCATCATCGGCCATGGGATTATTGCTAAGCTAGTTCTTCTCCTTTCTTGGATGTGCTTCTCCAATTATCCACTTTTGGTTTCGGGGTCATGCATTCATTTTGTATCAGCCAATTTGTTATGGCTTCTTACTTTATCTCTTCATCATTTGTAATAGCCTAGGTTATCTTCTTCCTTTTTTCTTGGCATTTTTGTATCTATATTTTGATCTCTCTTCATGTATCTCTTTGGATATTTTATTCATCAATGAAATGTTTCTTATCCAAAAAGAAATAAAGTTATGGATAGACCAATATCAATAAACCATCGGTGAAAGTACTTAAAAGTTCTTGCTCACTAATGAGTGAAGTATGACCACTGTCAAGATTGTTCAAGAAAGTAGATCCATTTGTTAGATAAGAGAATTACCTAAATGAGAATGATCCTTGATAATTGGGGATAAAAGCCTTTCTAACCAGAACAATCCCTACTTCACTATTACAATCAATGTTTTCAATATCAATTATGGAAAAACTATATAAAAAAGAATTCATTAAAATATTTAAATTTAAAAAAATAAGTATGGTACTCTTTGTTTTCCATGCGATTTTCTTTCTTACACTCTGCAATGATGTTGCATAAACAGGTAACTTAGATATGATTCTCAATGGATGCACCACACCCACTGGGTGCTTCTTCTCAAATTCCAAGTTATCTATTCCTAGCCGTTCTGCCATCTCACGAAGTCCTCACTGCAGTATGCAAACTGCTAGTATTAGGAGTTCATGCGAACCCCGTTTAGAGCATCAGACATGTTACTATAGAGGTGCATACTTCATTTCCCTCTTTTTGTATGATCTCTTTCATTCAATATAATCTTCATTTCGTATAGAAAAAGAATTATTAATGTGGTGGAAACATTAATATAAAGAAATTCTTGTCTGACTTTTGTGATGCTGACATCTTGAAAAGAGTTATACCATCCTTTTCAGTAATTGATTCTATGAATGGTGTGCTTCATTTTGTAATCCATTGTTTTTCAAATGTAGGTCTCTTACCCTTAAAACTACGTGCTGCATCTTCCCCTCTCCTAAGTGGGGATCTAGGTGGCTTGCTACATACAATCCCAAGGTTACCAAGGCAAAGAAAGATTGGCATGACACCACGGGCAGCCAAAGATGTCCCTACGAGTTTCCGTTTCCCTCCAATGACCACGAAACCAAAATGGTGGTGGAGGACATTAGCATGCCTGCCTTATTTAATGCCCCTTCACGAAACTTGGATGTATGCCGAAACAGCATACCACCTACACCCGTTCCTGGAGGACTTTGAATTCTTGACATATCCCTTTCTTGGAGCCATTGGGAGACTACCAAGTTGGTTCTTGATGGCATATTTTTTCGTTGCCTATCTAGGAGTTGTAAGACGGAAGGAATGGCCTCATTTCTTTCGATTTCACGTTGTTATGGGCATGTTGTTGGAGATTGCCCTGCAAGTGATTGGTACAGTGAGTCGTTGGATGCCCCTTGCAGTCTATTGGGGTAAATTAGGGATGCACTTTTGGACAGCCGTAGCATTCGCTTACCTGTTCACGGTCTTGGAATCCATACGCTGTGCTCTTGCAGGCATGTATGCTGATATCCCCTTTGTCTGTGATGCAGCCTACATCCAAATACCATATGATTAA

mRNA sequence

ATGGCTCCCAAGCGAGAAGCGAGACCTGAGCGAGAGCGCGAGAGCCAAGACAGCGAAACCGGCGAGAGAGCGAGAGTCTGCAGGCTGGGGCGACACTGGCGCGGGGGAAAACGTGAGTCGAGCGGGAGAGCGAGAGCGCGAGACAGCGGGAGAGCGAGAGCGCGAGACAGCGGGAGAGCGAGAGCTAGCGAGAGAGCAACACCACGAGAGAGAGCGAGAGAGAGAGATGTCGCGGTAGAGGAAGTTGGCGGCGGCTGTGGCGGCGGCGAAAGGGAGAGGAAAGGAGGTGCGGCGGAGAGAACGAGAGAGAGAGTTATTATTTTCTTTCTTTTTCTTTTGACTGCACGAAAAACGAGACAAAACCCTATCCCTCATCCCTTTCTTCTCTCTGCTGCTGGCCTCCGAAAAACGCACTACGGCGTGATTACGGCACAGCTGCCCGCGGGCTTGAAGGTTGTGCGGCGAGGCCCACAAGCACCACCGCCCCTATCCAGCCATCAGAGATTTCAGCAAAGTAATTTATCACCTGAGGCAACATTCGGCAGCTATCCACTACCCGAATGGCCCCAAATCGGATTCCCCATAACCTGTAGAAGTCAGGTTCGGATTGCGCGATTCAAGTTTAAGATTGATATTGGCGCTTTTGAAAGTGTAGTAAGTAGTTCTTGTGAAGTCTGTTTGCTGTTTGCTGTATGCTTTATATGCCTTGGTAACTTAGATATGATTCTCAATGGATGCACCACACCCACTGGGTGCTTCTTCTCAAATTCCAAGTTATCTATTCCTAGCCGTTCTGCCATCTCACGAAGTCCTCACTGCAGTATGCAAACTGCTAGTATTAGGAGTTCATGCGAACCCCGTTTAGAGCATCAGACATGTTACTATAGAGGTCTCTTACCCTTAAAACTACGTGCTGCATCTTCCCCTCTCCTAAGTGGGGATCTAGGTGGCTTGCTACATACAATCCCAAGGTTACCAAGGCAAAGAAAGATTGGCATGACACCACGGGCAGCCAAAGATGTCCCTACGAGTTTCCGTTTCCCTCCAATGACCACGAAACCAAAATGGTGGTGGAGGACATTAGCATGCCTGCCTTATTTAATGCCCCTTCACGAAACTTGGATGTATGCCGAAACAGCATACCACCTACACCCGTTCCTGGAGGACTTTGAATTCTTGACATATCCCTTTCTTGGAGCCATTGGGAGACTACCAAGTTGGTTCTTGATGGCATATTTTTTCGTTGCCTATCTAGGAGTTGTAAGACGGAAGGAATGGCCTCATTTCTTTCGATTTCACGTTGTTATGGGCATGTTGTTGGAGATTGCCCTGCAAGTGATTGGTACAGTGAGTCGTTGGATGCCCCTTGCAGTCTATTGGGGTAAATTAGGGATGCACTTTTGGACAGCCGTAGCATTCGCTTACCTGTTCACGGTCTTGGAATCCATACGCTGTGCTCTTGCAGGCATGTATGCTGATATCCCCTTTGTCTGTGATGCAGCCTACATCCAAATACCATATGATTAA

Coding sequence (CDS)

ATGGCTCCCAAGCGAGAAGCGAGACCTGAGCGAGAGCGCGAGAGCCAAGACAGCGAAACCGGCGAGAGAGCGAGAGTCTGCAGGCTGGGGCGACACTGGCGCGGGGGAAAACGTGAGTCGAGCGGGAGAGCGAGAGCGCGAGACAGCGGGAGAGCGAGAGCGCGAGACAGCGGGAGAGCGAGAGCTAGCGAGAGAGCAACACCACGAGAGAGAGCGAGAGAGAGAGATGTCGCGGTAGAGGAAGTTGGCGGCGGCTGTGGCGGCGGCGAAAGGGAGAGGAAAGGAGGTGCGGCGGAGAGAACGAGAGAGAGAGTTATTATTTTCTTTCTTTTTCTTTTGACTGCACGAAAAACGAGACAAAACCCTATCCCTCATCCCTTTCTTCTCTCTGCTGCTGGCCTCCGAAAAACGCACTACGGCGTGATTACGGCACAGCTGCCCGCGGGCTTGAAGGTTGTGCGGCGAGGCCCACAAGCACCACCGCCCCTATCCAGCCATCAGAGATTTCAGCAAAGTAATTTATCACCTGAGGCAACATTCGGCAGCTATCCACTACCCGAATGGCCCCAAATCGGATTCCCCATAACCTGTAGAAGTCAGGTTCGGATTGCGCGATTCAAGTTTAAGATTGATATTGGCGCTTTTGAAAGTGTAGTAAGTAGTTCTTGTGAAGTCTGTTTGCTGTTTGCTGTATGCTTTATATGCCTTGGTAACTTAGATATGATTCTCAATGGATGCACCACACCCACTGGGTGCTTCTTCTCAAATTCCAAGTTATCTATTCCTAGCCGTTCTGCCATCTCACGAAGTCCTCACTGCAGTATGCAAACTGCTAGTATTAGGAGTTCATGCGAACCCCGTTTAGAGCATCAGACATGTTACTATAGAGGTCTCTTACCCTTAAAACTACGTGCTGCATCTTCCCCTCTCCTAAGTGGGGATCTAGGTGGCTTGCTACATACAATCCCAAGGTTACCAAGGCAAAGAAAGATTGGCATGACACCACGGGCAGCCAAAGATGTCCCTACGAGTTTCCGTTTCCCTCCAATGACCACGAAACCAAAATGGTGGTGGAGGACATTAGCATGCCTGCCTTATTTAATGCCCCTTCACGAAACTTGGATGTATGCCGAAACAGCATACCACCTACACCCGTTCCTGGAGGACTTTGAATTCTTGACATATCCCTTTCTTGGAGCCATTGGGAGACTACCAAGTTGGTTCTTGATGGCATATTTTTTCGTTGCCTATCTAGGAGTTGTAAGACGGAAGGAATGGCCTCATTTCTTTCGATTTCACGTTGTTATGGGCATGTTGTTGGAGATTGCCCTGCAAGTGATTGGTACAGTGAGTCGTTGGATGCCCCTTGCAGTCTATTGGGGTAAATTAGGGATGCACTTTTGGACAGCCGTAGCATTCGCTTACCTGTTCACGGTCTTGGAATCCATACGCTGTGCTCTTGCAGGCATGTATGCTGATATCCCCTTTGTCTGTGATGCAGCCTACATCCAAATACCATATGATTAA

Protein sequence

MAPKREARPERERESQDSETGERARVCRLGRHWRGGKRESSGRARARDSGRARARDSGRARASERATPRERARERDVAVEEVGGGCGGGERERKGGAAERTRERVIIFFLFLLTARKTRQNPIPHPFLLSAAGLRKTHYGVITAQLPAGLKVVRRGPQAPPPLSSHQRFQQSNLSPEATFGSYPLPEWPQIGFPITCRSQVRIARFKFKIDIGAFESVVSSSCEVCLLFAVCFICLGNLDMILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQTASIRSSCEPRLEHQTCYYRGLLPLKLRAASSPLLSGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPKWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLGVVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTVLESIRCALAGMYADIPFVCDAAYIQIPYD

Homology

[Close]

BLAST of CmUC06G110890 vs. NCBI nr
Match: XP_038875339.1 (protein TIC 20-I, chloroplastic [Benincasa hispida] >XP_038875340.1 protein TIC 20-I, chloroplastic [Benincasa hispida] >XP_038875341.1 protein TIC 20-I, chloroplastic [Benincasa hispida] >XP_038875342.1 protein TIC 20-I, chloroplastic [Benincasa hispida])

HSP 1 Score: 536.6 bits (1381), Expect = 2.4e-148
Identity = 259/269 (96.28%), Postives = 263/269 (97.77%), Query Frame = 0


Query: 241 MILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQTASIRSSCEPRLEHQTCYYRGLLP 300
           MILNGCTTPTGCFFSNSKLSIP RSAISRSPHCSMQTASIRSS EPRLEHQTCYYRGLLP
Sbjct: 1   MILNGCTTPTGCFFSNSKLSIPGRSAISRSPHCSMQTASIRSSWEPRLEHQTCYYRGLLP 60

Query: 301 LKLRAASSPLLSGDLGGLLHTIPRLPRQRKIGM-TPRAAKDVPTSFRFPPMTTKPKWWWR 360
           LKLRAASSPLLSGDLGGLLH IPRLPRQ+KIGM TP+AAKDVPTSFRFPPMTTKPKWWWR
Sbjct: 61  LKLRAASSPLLSGDLGGLLHMIPRLPRQKKIGMTTPQAAKDVPTSFRFPPMTTKPKWWWR 120

Query: 361 TLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLG 420
           TLACLPYLMPLHETWMYAETAYHLHPFLE+FE  TYPFLGAIGRLPSWFLMAYFFVAYLG
Sbjct: 121 TLACLPYLMPLHETWMYAETAYHLHPFLEEFELFTYPFLGAIGRLPSWFLMAYFFVAYLG 180

Query: 421 VVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTV 480
           VVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTV
Sbjct: 181 VVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTV 240

Query: 481 LESIRCALAGMYADIPFVCDAAYIQIPYD 509
           LESIRCALAGMYAD+PFVCDAAYIQIPYD
Sbjct: 241 LESIRCALAGMYADVPFVCDAAYIQIPYD 269

[Close]

BLAST of CmUC06G110890 vs. NCBI nr
Match: XP_022151562.1 (protein TIC 20-I, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 510.8 bits (1314), Expect = 1.4e-140
Identity = 244/268 (91.04%), Postives = 254/268 (94.78%), Query Frame = 0


Query: 241 MILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQTASIRSSCEPRLEHQTCYYRGLLP 300
           MILNGCTTPTG  FSNS+  IPSRS  SR+P CSMQTA IRSS EPRLEHQTC+ +GLLP
Sbjct: 1   MILNGCTTPTGWCFSNSRFCIPSRSTASRTPGCSMQTARIRSSWEPRLEHQTCFSKGLLP 60

Query: 301 LKLRAASSPLLSGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPKWWWRT 360
           LKLRAASSPLLSGDLGGLLHTIPRLPRQ++IGMTP+A+KDVPTSFRFPPMTTKPKWWWRT
Sbjct: 61  LKLRAASSPLLSGDLGGLLHTIPRLPRQKRIGMTPQASKDVPTSFRFPPMTTKPKWWWRT 120

Query: 361 LACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLGV 420
           LACLPYLMPLHETWMYAETAYHLHPFLEDFEF TYPFLGAIGRLPSWFLMAYFFVAYLGV
Sbjct: 121 LACLPYLMPLHETWMYAETAYHLHPFLEDFEFATYPFLGAIGRLPSWFLMAYFFVAYLGV 180

Query: 421 VRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTVL 480
           VRRKEWPHF RFHVVMGMLLEIALQVIGTVSRWMPLAVYWGK GMHFWTAV+FAYLFTVL
Sbjct: 181 VRRKEWPHFLRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKFGMHFWTAVSFAYLFTVL 240

Query: 481 ESIRCALAGMYADIPFVCDAAYIQIPYD 509
           E IRCALAGMYADIPF+CDAAYIQIPYD
Sbjct: 241 ECIRCALAGMYADIPFICDAAYIQIPYD 268

[Close]

BLAST of CmUC06G110890 vs. NCBI nr
Match: XP_022151560.1 (protein TIC 20-I, chloroplastic isoform X1 [Momordica charantia] >XP_022151561.1 protein TIC 20-I, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 506.1 bits (1302), Expect = 3.4e-139
Identity = 244/269 (90.71%), Postives = 254/269 (94.42%), Query Frame = 0


Query: 241 MILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQTASIRSSCEPRLEHQTCYYR-GLL 300
           MILNGCTTPTG  FSNS+  IPSRS  SR+P CSMQTA IRSS EPRLEHQTC+ + GLL
Sbjct: 1   MILNGCTTPTGWCFSNSRFCIPSRSTASRTPGCSMQTARIRSSWEPRLEHQTCFSKVGLL 60

Query: 301 PLKLRAASSPLLSGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPKWWWR 360
           PLKLRAASSPLLSGDLGGLLHTIPRLPRQ++IGMTP+A+KDVPTSFRFPPMTTKPKWWWR
Sbjct: 61  PLKLRAASSPLLSGDLGGLLHTIPRLPRQKRIGMTPQASKDVPTSFRFPPMTTKPKWWWR 120

Query: 361 TLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLG 420
           TLACLPYLMPLHETWMYAETAYHLHPFLEDFEF TYPFLGAIGRLPSWFLMAYFFVAYLG
Sbjct: 121 TLACLPYLMPLHETWMYAETAYHLHPFLEDFEFATYPFLGAIGRLPSWFLMAYFFVAYLG 180

Query: 421 VVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTV 480
           VVRRKEWPHF RFHVVMGMLLEIALQVIGTVSRWMPLAVYWGK GMHFWTAV+FAYLFTV
Sbjct: 181 VVRRKEWPHFLRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKFGMHFWTAVSFAYLFTV 240

Query: 481 LESIRCALAGMYADIPFVCDAAYIQIPYD 509
           LE IRCALAGMYADIPF+CDAAYIQIPYD
Sbjct: 241 LECIRCALAGMYADIPFICDAAYIQIPYD 269

[Close]

BLAST of CmUC06G110890 vs. NCBI nr
Match: KAG6575237.1 (Protein TIC 20-I, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 502.7 bits (1293), Expect = 3.8e-138
Identity = 238/276 (86.23%), Postives = 257/276 (93.12%), Query Frame = 0


Query: 234 ICLGNLDMILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQ-TASIRSSCEPRLEHQT 293
           + LGN DMILNGCTTPTG FFSNS+LSIP+RSAISRSP CSM   ASIRSS EP LEHQT
Sbjct: 406 LTLGNFDMILNGCTTPTGFFFSNSRLSIPNRSAISRSPDCSMHAAASIRSSREPHLEHQT 465

Query: 294 CYYRGLLPLKLRAASSPLLSGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTT 353
           C YRG+ PLKL A SS  LSGDLGGLLHTIPRLPR+R +GMTPRAAKD+PTS+RFPPMTT
Sbjct: 466 CRYRGVFPLKLGAGSSHFLSGDLGGLLHTIPRLPRKRNVGMTPRAAKDIPTSYRFPPMTT 525

Query: 354 KPKWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAY 413
           KPKWWWRTLACLPYLMP HETWMY+ETAYHLHPFLEDFEFLTYPFL A+G+LP+WFL+AY
Sbjct: 526 KPKWWWRTLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAY 585

Query: 414 FFVAYLGVVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVA 473
           FF+AYLG+VRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGK+GMHFWTAV+
Sbjct: 586 FFIAYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVS 645

Query: 474 FAYLFTVLESIRCALAGMYADIPFVCDAAYIQIPYD 509
           FAYLFTVLE++RCALAGMYADIPF CDAAYIQIPYD
Sbjct: 646 FAYLFTVLEAVRCALAGMYADIPFFCDAAYIQIPYD 681

[Close]

BLAST of CmUC06G110890 vs. NCBI nr
Match: XP_008459737.1 (PREDICTED: protein TIC 20-I, chloroplastic-like [Cucumis melo] >KAA0039751.1 protein TIC 20-I [Cucumis melo var. makuwa] >TYK24746.1 protein TIC 20-I [Cucumis melo var. makuwa])

HSP 1 Score: 498.0 bits (1281), Expect = 9.3e-137
Identity = 233/268 (86.94%), Postives = 253/268 (94.40%), Query Frame = 0


Query: 241 MILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQTASIRSSCEPRLEHQTCYYRGLLP 300
           MILNGCTTPTGCFFSNSKLSIPSRS+I R+P CS QTASIRSS EP L+HQTCYY GLLP
Sbjct: 1   MILNGCTTPTGCFFSNSKLSIPSRSSILRNPRCSTQTASIRSSWEPHLKHQTCYYGGLLP 60

Query: 301 LKLRAASSPLLSGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPKWWWRT 360
           LKL AASSPLLSGDLGGLL TIPRLP ++ I MTPRA+KDVPTS+R+PPMTTKPKWWWRT
Sbjct: 61  LKLNAASSPLLSGDLGGLLSTIPRLPGKKNISMTPRASKDVPTSYRYPPMTTKPKWWWRT 120

Query: 361 LACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLGV 420
           LACLPYLMPLHETWMY ETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFL+AYFFVAYLGV
Sbjct: 121 LACLPYLMPLHETWMYGETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLIAYFFVAYLGV 180

Query: 421 VRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTVL 480
           VRRKEWPHF RFHVVMGML+EI+LQVIGT+SRW+P++VYWGKLGMHFWTAV FAY+FTVL
Sbjct: 181 VRRKEWPHFLRFHVVMGMLMEISLQVIGTMSRWLPISVYWGKLGMHFWTAVCFAYMFTVL 240

Query: 481 ESIRCALAGMYADIPFVCDAAYIQIPYD 509
           E +RCALAGMYAD+PFVC+AAYIQIP+D
Sbjct: 241 ECMRCALAGMYADVPFVCNAAYIQIPFD 268

[Close]

BLAST of CmUC06G110890 vs. ExPASy Swiss-Prot
Match: Q8GZ79 (Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-I PE=1 SV=1)

HSP 1 Score: 385.6 bits (989), Expect = 8.8e-106
Identity = 184/213 (86.38%), Postives = 196/213 (92.02%), Query Frame = 0


Query: 296 RGLLPLKLRAASSPLLSGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPK 355
           RG+    L A+SS LL+G+ G L  T+P LP +RK  +TPRA+KDVP+SFRFPPMT KP+
Sbjct: 62  RGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSFRFPPMTKKPQ 121

Query: 356 WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFV 415
           WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFV
Sbjct: 122 WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFV 181

Query: 416 AYLGVVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAY 475
           AYLG+VRRKEWPHFFRFHVVMGMLLEIALQVIGTVS+WMPL VYWGK GMHFWTAVAFAY
Sbjct: 182 AYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAVAFAY 241

Query: 476 LFTVLESIRCALAGMYADIPFVCDAAYIQIPYD 509
           LFTVLESIRCALAGMYADIPFVCDAAYIQIPYD
Sbjct: 242 LFTVLESIRCALAGMYADIPFVCDAAYIQIPYD 274

[Close]

BLAST of CmUC06G110890 vs. ExPASy Swiss-Prot
Match: Q9ZST8 (Protein TIC 20, chloroplastic OS=Pisum sativum OX=3888 GN=TIC20 PE=1 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 5.2e-82
Identity = 158/268 (58.96%), Postives = 186/268 (69.40%), Query Frame = 0


Query: 241 MILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQTASIRSSCEPRLEHQTCYYRGLLP 300
           MI NG T   G     +   IP++ A+S          SIRS     LE++    RG+  
Sbjct: 1   MIQNGGTVSQGSVLCYA-CQIPAKVAVS----------SIRSFWGHSLENKP---RGMTF 60

Query: 301 LKLRAASSPLLSGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPKWWWRT 360
             + A SS LLSG    L  TIP LP   K   TPRA KD  + FRFPPMT KP+WWWRT
Sbjct: 61  TDMSATSSLLLSGGQNFLSRTIPVLPTLHKSSTTPRATKD-SSGFRFPPMTKKPRWWWRT 120

Query: 361 LACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLGV 420
           L+C+PYL+P H+ WMYA TAYHLHPF+  F+ +TYPFL AIG LP W L+AYF +AYL +
Sbjct: 121 LSCIPYLLPFHQAWMYARTAYHLHPFIPYFQPMTYPFLMAIGTLPRWSLIAYFLIAYLTI 180

Query: 421 VRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTVL 480
           VRRKEWPHFFRFHV +GML+EIALQV G VSRWMP + YWGKLGMHFWT   F +LFT +
Sbjct: 181 VRRKEWPHFFRFHVAVGMLIEIALQVTGIVSRWMPRSFYWGKLGMHFWTTAFFVFLFTTI 240

Query: 481 ESIRCALAGMYADIPFVCDAAYIQIPYD 509
           E IRCAL GMYAD+PFVCDAAYIQIP++
Sbjct: 241 ECIRCALVGMYADVPFVCDAAYIQIPHE 253

[Close]

BLAST of CmUC06G110890 vs. ExPASy Swiss-Prot
Match: Q9ZQZ9 (Protein TIC 20-IV, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-IV PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 1.4e-39
Identity = 104/276 (37.68%), Postives = 148/276 (53.62%), Query Frame = 0


Query: 237 GNLDMILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQTASIRSSCEPRLEHQTCYYR 296
           G+L  +     +P    F N ++  P+   +  S    +  +SI   C           R
Sbjct: 12  GSLTFLAPRNHSPISKKFVNPRVFFPN---VDSSAKLRLSASSISRRCP----------R 71

Query: 297 GLLPLKLRA----ASSPLLSGDL--GGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPM 356
            + PL   A    A++   S  L   GL    P L R R+     R AKD     + P +
Sbjct: 72  EIAPLSATASVDFAAAATSSNQLFANGLPPLAPGLRRHRRPIEPARVAKDDFFKIKLPKI 131

Query: 357 TTKPKWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEF---LTYPFLGAIGRLPSW 416
             +P+WWWRTLAC+PYL+ L      ++  +++ PFLE  +    + Y   GAI R P+W
Sbjct: 132 AERPEWWWRTLACVPYLISL----QISDVGFYVQPFLEKHDAIGDMIYFIPGAINRWPTW 191

Query: 417 FLMAYFFVAYLGVVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHF 476
           F M Y ++ Y+ VV+ KE PH+ RFH++MGMLLE ALQVI   S + PL  + G+ GM++
Sbjct: 192 FFMVYCYLGYMWVVKNKELPHYLRFHMMMGMLLETALQVIWCTSNFFPLIHFKGRFGMYY 251

Query: 477 WTAVAFAYLFTVLESIRCALAGMYADIPFVCDAAYI 504
           W A+ F Y+  +LE IRCALAG+YA IPF+ DAA I
Sbjct: 252 WMAIGFTYICLLLECIRCALAGVYAQIPFMTDAASI 270

[Close]

BLAST of CmUC06G110890 vs. ExPASy Swiss-Prot
Match: P73387 (Tic20 family protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=sll1737 PE=3 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 3.3e-04
Identity = 42/156 (26.92%), Postives = 72/156 (46.15%), Query Frame = 0


Query: 359 RTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYL 418
           R  + L Y++PL + +M+        P L+       P L    + P +     F V ++
Sbjct: 12  RFFSALIYVIPLIDAFMFGGFLLQQFPVLQIIYLPIMPLLQFYYQFP-FASFIIFIVLFM 71

Query: 419 GVVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYL-- 478
            VVR     HF RF+ +  +L+ I L + G +  ++   V+    G+   T   FA+L  
Sbjct: 72  AVVRNNNISHFIRFNAMQAILIGILLSLFGLIVAYVIQPVF--GQGLVTETLYNFAFLGA 131

Query: 479 -----FTVLESIRCALAGMYADIPFVCDAAYIQIPY 508
                F +++S+     G YA+IP + DAAY Q+ +
Sbjct: 132 LACGFFGIVQSV----LGRYAEIPTISDAAYSQVRF 160

[Close]

BLAST of CmUC06G110890 vs. ExPASy TrEMBL
Match: A0A6J1DDV0 (Protein TIC 20 OS=Momordica charantia OX=3673 GN=LOC111019474 PE=3 SV=1)

HSP 1 Score: 510.8 bits (1314), Expect = 6.7e-141
Identity = 244/268 (91.04%), Postives = 254/268 (94.78%), Query Frame = 0


Query: 241 MILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQTASIRSSCEPRLEHQTCYYRGLLP 300
           MILNGCTTPTG  FSNS+  IPSRS  SR+P CSMQTA IRSS EPRLEHQTC+ +GLLP
Sbjct: 1   MILNGCTTPTGWCFSNSRFCIPSRSTASRTPGCSMQTARIRSSWEPRLEHQTCFSKGLLP 60

Query: 301 LKLRAASSPLLSGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPKWWWRT 360
           LKLRAASSPLLSGDLGGLLHTIPRLPRQ++IGMTP+A+KDVPTSFRFPPMTTKPKWWWRT
Sbjct: 61  LKLRAASSPLLSGDLGGLLHTIPRLPRQKRIGMTPQASKDVPTSFRFPPMTTKPKWWWRT 120

Query: 361 LACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLGV 420
           LACLPYLMPLHETWMYAETAYHLHPFLEDFEF TYPFLGAIGRLPSWFLMAYFFVAYLGV
Sbjct: 121 LACLPYLMPLHETWMYAETAYHLHPFLEDFEFATYPFLGAIGRLPSWFLMAYFFVAYLGV 180

Query: 421 VRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTVL 480
           VRRKEWPHF RFHVVMGMLLEIALQVIGTVSRWMPLAVYWGK GMHFWTAV+FAYLFTVL
Sbjct: 181 VRRKEWPHFLRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKFGMHFWTAVSFAYLFTVL 240

Query: 481 ESIRCALAGMYADIPFVCDAAYIQIPYD 509
           E IRCALAGMYADIPF+CDAAYIQIPYD
Sbjct: 241 ECIRCALAGMYADIPFICDAAYIQIPYD 268

[Close]

BLAST of CmUC06G110890 vs. ExPASy TrEMBL
Match: A0A6J1DBI9 (Protein TIC 20 OS=Momordica charantia OX=3673 GN=LOC111019474 PE=3 SV=1)

HSP 1 Score: 506.1 bits (1302), Expect = 1.7e-139
Identity = 244/269 (90.71%), Postives = 254/269 (94.42%), Query Frame = 0


Query: 241 MILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQTASIRSSCEPRLEHQTCYYR-GLL 300
           MILNGCTTPTG  FSNS+  IPSRS  SR+P CSMQTA IRSS EPRLEHQTC+ + GLL
Sbjct: 1   MILNGCTTPTGWCFSNSRFCIPSRSTASRTPGCSMQTARIRSSWEPRLEHQTCFSKVGLL 60

Query: 301 PLKLRAASSPLLSGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPKWWWR 360
           PLKLRAASSPLLSGDLGGLLHTIPRLPRQ++IGMTP+A+KDVPTSFRFPPMTTKPKWWWR
Sbjct: 61  PLKLRAASSPLLSGDLGGLLHTIPRLPRQKRIGMTPQASKDVPTSFRFPPMTTKPKWWWR 120

Query: 361 TLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLG 420
           TLACLPYLMPLHETWMYAETAYHLHPFLEDFEF TYPFLGAIGRLPSWFLMAYFFVAYLG
Sbjct: 121 TLACLPYLMPLHETWMYAETAYHLHPFLEDFEFATYPFLGAIGRLPSWFLMAYFFVAYLG 180

Query: 421 VVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTV 480
           VVRRKEWPHF RFHVVMGMLLEIALQVIGTVSRWMPLAVYWGK GMHFWTAV+FAYLFTV
Sbjct: 181 VVRRKEWPHFLRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKFGMHFWTAVSFAYLFTV 240

Query: 481 LESIRCALAGMYADIPFVCDAAYIQIPYD 509
           LE IRCALAGMYADIPF+CDAAYIQIPYD
Sbjct: 241 LECIRCALAGMYADIPFICDAAYIQIPYD 269

[Close]

BLAST of CmUC06G110890 vs. ExPASy TrEMBL
Match: A0A5A7TDM5 (Protein TIC 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003090 PE=3 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 4.5e-137
Identity = 233/268 (86.94%), Postives = 253/268 (94.40%), Query Frame = 0


Query: 241 MILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQTASIRSSCEPRLEHQTCYYRGLLP 300
           MILNGCTTPTGCFFSNSKLSIPSRS+I R+P CS QTASIRSS EP L+HQTCYY GLLP
Sbjct: 1   MILNGCTTPTGCFFSNSKLSIPSRSSILRNPRCSTQTASIRSSWEPHLKHQTCYYGGLLP 60

Query: 301 LKLRAASSPLLSGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPKWWWRT 360
           LKL AASSPLLSGDLGGLL TIPRLP ++ I MTPRA+KDVPTS+R+PPMTTKPKWWWRT
Sbjct: 61  LKLNAASSPLLSGDLGGLLSTIPRLPGKKNISMTPRASKDVPTSYRYPPMTTKPKWWWRT 120

Query: 361 LACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLGV 420
           LACLPYLMPLHETWMY ETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFL+AYFFVAYLGV
Sbjct: 121 LACLPYLMPLHETWMYGETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLIAYFFVAYLGV 180

Query: 421 VRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTVL 480
           VRRKEWPHF RFHVVMGML+EI+LQVIGT+SRW+P++VYWGKLGMHFWTAV FAY+FTVL
Sbjct: 181 VRRKEWPHFLRFHVVMGMLMEISLQVIGTMSRWLPISVYWGKLGMHFWTAVCFAYMFTVL 240

Query: 481 ESIRCALAGMYADIPFVCDAAYIQIPYD 509
           E +RCALAGMYAD+PFVC+AAYIQIP+D
Sbjct: 241 ECMRCALAGMYADVPFVCNAAYIQIPFD 268

[Close]

BLAST of CmUC06G110890 vs. ExPASy TrEMBL
Match: A0A1S3CAY7 (Protein TIC 20 OS=Cucumis melo OX=3656 GN=LOC103498780 PE=3 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 4.5e-137
Identity = 233/268 (86.94%), Postives = 253/268 (94.40%), Query Frame = 0


Query: 241 MILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQTASIRSSCEPRLEHQTCYYRGLLP 300
           MILNGCTTPTGCFFSNSKLSIPSRS+I R+P CS QTASIRSS EP L+HQTCYY GLLP
Sbjct: 1   MILNGCTTPTGCFFSNSKLSIPSRSSILRNPRCSTQTASIRSSWEPHLKHQTCYYGGLLP 60

Query: 301 LKLRAASSPLLSGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPKWWWRT 360
           LKL AASSPLLSGDLGGLL TIPRLP ++ I MTPRA+KDVPTS+R+PPMTTKPKWWWRT
Sbjct: 61  LKLNAASSPLLSGDLGGLLSTIPRLPGKKNISMTPRASKDVPTSYRYPPMTTKPKWWWRT 120

Query: 361 LACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLGV 420
           LACLPYLMPLHETWMY ETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFL+AYFFVAYLGV
Sbjct: 121 LACLPYLMPLHETWMYGETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLIAYFFVAYLGV 180

Query: 421 VRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTVL 480
           VRRKEWPHF RFHVVMGML+EI+LQVIGT+SRW+P++VYWGKLGMHFWTAV FAY+FTVL
Sbjct: 181 VRRKEWPHFLRFHVVMGMLMEISLQVIGTMSRWLPISVYWGKLGMHFWTAVCFAYMFTVL 240

Query: 481 ESIRCALAGMYADIPFVCDAAYIQIPYD 509
           E +RCALAGMYAD+PFVC+AAYIQIP+D
Sbjct: 241 ECMRCALAGMYADVPFVCNAAYIQIPFD 268

[Close]

BLAST of CmUC06G110890 vs. ExPASy TrEMBL
Match: A0A6J1KYA1 (Protein TIC 20 OS=Cucurbita maxima OX=3661 GN=LOC111499301 PE=3 SV=1)

HSP 1 Score: 496.1 bits (1276), Expect = 1.7e-136
Identity = 235/269 (87.36%), Postives = 253/269 (94.05%), Query Frame = 0


Query: 241 MILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQ-TASIRSSCEPRLEHQTCYYRGLL 300
           MILNGCTTPTG FFSNS+LSIP+RSAISRSP CSM   ASIRSS EP LEHQTC YRG+ 
Sbjct: 1   MILNGCTTPTGFFFSNSRLSIPNRSAISRSPDCSMHAAASIRSSREPHLEHQTCRYRGVF 60

Query: 301 PLKLRAASSPLLSGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPKWWWR 360
           PLKL A SS LLSGDLGGLLHTIPRLPR+R +GMTPRAAKD+PTS+RFPPMTTKPKWWWR
Sbjct: 61  PLKLGAGSSHLLSGDLGGLLHTIPRLPRKRNVGMTPRAAKDIPTSYRFPPMTTKPKWWWR 120

Query: 361 TLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFVAYLG 420
           TLACLPYLMP HETWMY+ETAYHLHPFLEDFEFLTYPFL A+G+LP+WFL+AYFF+AYLG
Sbjct: 121 TLACLPYLMPFHETWMYSETAYHLHPFLEDFEFLTYPFLEALGQLPTWFLIAYFFIAYLG 180

Query: 421 VVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAYLFTV 480
           +VRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGK+GMHFWTAV+FAYLFTV
Sbjct: 181 IVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKVGMHFWTAVSFAYLFTV 240

Query: 481 LESIRCALAGMYADIPFVCDAAYIQIPYD 509
           LE++RCALAGMYADIPF CDAAYIQIPYD
Sbjct: 241 LEAVRCALAGMYADIPFFCDAAYIQIPYD 269

[Close]

BLAST of CmUC06G110890 vs. TAIR 10
Match: AT1G04940.1 (translocon at the inner envelope membrane of chloroplasts 20 )

HSP 1 Score: 385.6 bits (989), Expect = 6.3e-107
Identity = 184/213 (86.38%), Postives = 196/213 (92.02%), Query Frame = 0


Query: 296 RGLLPLKLRAASSPLLSGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPK 355
           RG+    L A+SS LL+G+ G L  T+P LP +RK  +TPRA+KDVP+SFRFPPMT KP+
Sbjct: 62  RGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSFRFPPMTKKPQ 121

Query: 356 WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFV 415
           WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFV
Sbjct: 122 WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFV 181

Query: 416 AYLGVVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAY 475
           AYLG+VRRKEWPHFFRFHVVMGMLLEIALQVIGTVS+WMPL VYWGK GMHFWTAVAFAY
Sbjct: 182 AYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAVAFAY 241

Query: 476 LFTVLESIRCALAGMYADIPFVCDAAYIQIPYD 509
           LFTVLESIRCALAGMYADIPFVCDAAYIQIPYD
Sbjct: 242 LFTVLESIRCALAGMYADIPFVCDAAYIQIPYD 274

[Close]

BLAST of CmUC06G110890 vs. TAIR 10
Match: AT1G04945.3 (HIT-type Zinc finger family protein )

HSP 1 Score: 342.8 bits (878), Expect = 4.7e-94
Identity = 164/193 (84.97%), Postives = 176/193 (91.19%), Query Frame = 0


Query: 296 RGLLPLKLRAASSPLLSGDLGGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPMTTKPK 355
           RG+    L A+SS LL+G+ G L  T+P LP +RK  +TPRA+KDVP+SFRFPPMT KP+
Sbjct: 62  RGVPLSYLSASSSLLLNGEQGSLSGTLPVLPVRRKTLLTPRASKDVPSSFRFPPMTKKPQ 121

Query: 356 WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFV 415
           WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFV
Sbjct: 122 WWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEFLTYPFLGAIGRLPSWFLMAYFFV 181

Query: 416 AYLGVVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHFWTAVAFAY 475
           AYLG+VRRKEWPHFFRFHVVMGMLLEIALQVIGTVS+WMPL VYWGK GMHFWTAVAFAY
Sbjct: 182 AYLGIVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSKWMPLGVYWGKFGMHFWTAVAFAY 241

Query: 476 LFTVLESIRCALA 489
           LFTVLESIRCALA
Sbjct: 242 LFTVLESIRCALA 254

[Close]

BLAST of CmUC06G110890 vs. TAIR 10
Match: AT4G03320.1 (translocon at the inner envelope membrane of chloroplasts 20-IV )

HSP 1 Score: 165.6 bits (418), Expect = 1.0e-40
Identity = 104/276 (37.68%), Postives = 148/276 (53.62%), Query Frame = 0


Query: 237 GNLDMILNGCTTPTGCFFSNSKLSIPSRSAISRSPHCSMQTASIRSSCEPRLEHQTCYYR 296
           G+L  +     +P    F N ++  P+   +  S    +  +SI   C           R
Sbjct: 12  GSLTFLAPRNHSPISKKFVNPRVFFPN---VDSSAKLRLSASSISRRCP----------R 71

Query: 297 GLLPLKLRA----ASSPLLSGDL--GGLLHTIPRLPRQRKIGMTPRAAKDVPTSFRFPPM 356
            + PL   A    A++   S  L   GL    P L R R+     R AKD     + P +
Sbjct: 72  EIAPLSATASVDFAAAATSSNQLFANGLPPLAPGLRRHRRPIEPARVAKDDFFKIKLPKI 131

Query: 357 TTKPKWWWRTLACLPYLMPLHETWMYAETAYHLHPFLEDFEF---LTYPFLGAIGRLPSW 416
             +P+WWWRTLAC+PYL+ L      ++  +++ PFLE  +    + Y   GAI R P+W
Sbjct: 132 AERPEWWWRTLACVPYLISL----QISDVGFYVQPFLEKHDAIGDMIYFIPGAINRWPTW 191

Query: 417 FLMAYFFVAYLGVVRRKEWPHFFRFHVVMGMLLEIALQVIGTVSRWMPLAVYWGKLGMHF 476
           F M Y ++ Y+ VV+ KE PH+ RFH++MGMLLE ALQVI   S + PL  + G+ GM++
Sbjct: 192 FFMVYCYLGYMWVVKNKELPHYLRFHMMMGMLLETALQVIWCTSNFFPLIHFKGRFGMYY 251

Query: 477 WTAVAFAYLFTVLESIRCALAGMYADIPFVCDAAYI 504
           W A+ F Y+  +LE IRCALAG+YA IPF+ DAA I
Sbjct: 252 WMAIGFTYICLLLECIRCALAGVYAQIPFMTDAASI 270

The following BLAST results are available for this feature:

BLAST of CmUC06G110890 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038875339.1	2.4e-148	96.28	protein TIC 20-I, chloroplastic [Benincasa hispida] >XP_038875340.1 protein TIC ...	[more]
XP_022151562.1	1.4e-140	91.04	protein TIC 20-I, chloroplastic isoform X2 [Momordica charantia]	[more]
XP_022151560.1	3.4e-139	90.71	protein TIC 20-I, chloroplastic isoform X1 [Momordica charantia] >XP_022151561.1...	[more]
KAG6575237.1	3.8e-138	86.23	Protein TIC 20-I, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_008459737.1	9.3e-137	86.94	PREDICTED: protein TIC 20-I, chloroplastic-like [Cucumis melo] >KAA0039751.1 pro...	[more]

BLAST of CmUC06G110890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GZ79	8.8e-106	86.38	Protein TIC 20-I, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-I PE=1 ...	[more]
Q9ZST8	5.2e-82	58.96	Protein TIC 20, chloroplastic OS=Pisum sativum OX=3888 GN=TIC20 PE=1 SV=1	[more]
Q9ZQZ9	1.4e-39	37.68	Protein TIC 20-IV, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TIC20-IV PE=...	[more]
P73387	3.3e-04	26.92	Tic20 family protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 ...	[more]

BLAST of CmUC06G110890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DDV0	6.7e-141	91.04	Protein TIC 20 OS=Momordica charantia OX=3673 GN=LOC111019474 PE=3 SV=1	[more]
A0A6J1DBI9	1.7e-139	90.71	Protein TIC 20 OS=Momordica charantia OX=3673 GN=LOC111019474 PE=3 SV=1	[more]
A0A5A7TDM5	4.5e-137	86.94	Protein TIC 20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00309...	[more]
A0A1S3CAY7	4.5e-137	86.94	Protein TIC 20 OS=Cucumis melo OX=3656 GN=LOC103498780 PE=3 SV=1	[more]
A0A6J1KYA1	1.7e-136	87.36	Protein TIC 20 OS=Cucurbita maxima OX=3661 GN=LOC111499301 PE=3 SV=1	[more]

BLAST of CmUC06G110890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G04940.1	6.3e-107	86.38	translocon at the inner envelope membrane of chloroplasts 20	[more]
AT1G04945.3	4.7e-94	84.97	HIT-type Zinc finger family protein	[more]
AT4G03320.1	1.0e-40	37.68	translocon at the inner envelope membrane of chloroplasts 20-IV	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005691	Chloroplast protein import component Tic20	TIGRFAM	TIGR00994	TIGR00994	coord: 241..508 e-value: 1.3E-122 score: 406.7
IPR005691	Chloroplast protein import component Tic20	PFAM	PF16166	TIC20	coord: 327..501 e-value: 1.4E-72 score: 243.2
IPR005691	Chloroplast protein import component Tic20	PANTHER	PTHR33510	PROTEIN TIC 20-II, CHLOROPLASTIC	coord: 241..508
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..97
None	No IPR available	PANTHER	PTHR33510:SF9	HIT-TYPE ZINC FINGER FAMILY PROTEIN-RELATED	coord: 241..508

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC06G110890.1	CmUC06G110890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0009706	chloroplast inner membrane
cellular_component	GO:0016021	integral component of membrane