CmUC06G110110 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC06G110110
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	rRNA-processing protein fcf2
Location	CmU531Chr06: 2126151 .. 2132372 (-)
RNA-Seq Expression	CmUC06G110110
Synteny	CmUC06G110110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGATATGGACATATGGTATCGATGTGGGAACTTTGTCAACTCTTTGGGCCTTTTTGTTGAGATGTTGAACACCTTCCTCCTTCAAATGAATTTGGTTTTTTTATGCTTTGCAGGGTGGGATAGACACCAACGAACTATTGGGGTTGGATGGTTGACCACTTGAAAGAGCATAAGATTGACGAAGCTATCATAATTCTTTGGTGTTTATGAAACTATAGAGGACGCCTAACATATTAGTTGGATAACAAAATTTTTTTCTATATAAATGAAATTTAAAAAGTGAAAGGTGCCAAATTTCTTATAGATTGGTTGGATAACTTAATCAGTCACATCCCAAAGAGTCCCCTAGTTCAAATGAGTGGACATCCAATACTTATGTTGCTTGGAATTCTACCATGAAATTCAGTGGTTAGGGTTGAGTGGTTCGTGACTCTTTAGAATCTCCAATATATGTCGATTTCAAAAAGTTTTTTTTATGAGTGATCTATCAATATTTTAGAACAAAGCTATTTACGAAAGGTTTACAAAATCTTTATTATTTATATAAAAAAAACTCCACAATTTATTTATTTTTAAATAACAAAAAAACTAAAAAAAATTAAGTTAAATTACAAATTTAATTCCTAATTTAGTTCTTATAAATACTCAATTAACTAAATTCTAACTCTTTGCCCATCATACGACTAAATTCTAACATTCTACGTAATCGTTGAGACCAAATTCGTAATTAAAAAGGGAAAAAAAGAAAAAACTTGATCTCTCGCAAACCCTCGTGAAAAGAGGGGGGATAGCCTTCTCGAGTCTGATTTTCGCACAAACCCTCACTCTCTCGCTGTGTCCTCCTCAATCTTCTGCAGTCTTCCCCAATCTCACGATCTTGCACTGCGCAAGACGGGTTAAGCCTTGGGCTTGTTCGCTTGGAGGTCGTCTTCGTGGGCTTGCCGTGTTAAGCCGCCGTCCACCGTTCGTTGTGGAAGTCGTGCGTAGCAGAATTTTAATAAATATTTTGATTTGCTCGAAACCGAAAACCGAACTGACCAGGAACTAATTGATCTTTTTTTTCTTTTATTTGGTGTAGATGTCAGAAAGAAAGCCTATCATTGGCCTCTCTTGGGAGCCAAAGCTGCCCGCCTCCTCATCGGGGATCAGAACTAAAACTTGTGATAAATCTAACAGTCAAGCAGAAAACAGTCTTGTTTGGAAAACCAACTCAGAGCTTGTTGATGGGCTGTTTGTTCCACCAAACAAACCAAAAAAATTGAACAAGTTATTGAGAAAGCAAGTCAGCGACACGGCTGGGAGGAATTGGTATATGTTATTTTCTATAAAATTCAGCAGTTTTATTGTTGATTTCTGGAAAAAAAAAAAAAAAACCGACAAAAGCGTTTTTTCTCCTTTCCCATTGTTCTAATTTTATTTGAATGCTGATTAACCATAGTAGTTGATGATATTCTAAATTATAATACCCATACGCTTGTTATTGTAACTAGGTTTGACATGCCAGCACAAACCGTGACCCCTGAAGTGGAAAAAGATTTGCGCTTGTTGAAGGTGAGCCTACATCTGATGTTCCATTTTATTCTTTATCAGTTTTCTTTTCCACTCATATAGCAAGCTGGTAACTTTGACCATGTATCAAGAGTTGTAACTTTTAATCATGCTACAGAGCTCTTCAGTTGTGAGATGGGTATATCTTGCGTGTTTCCTGTGAATATCTTGGGTTCCAAACCTTCAAGAGTCAACGTTTTTCTAGAGCCAGGACACTGAATATATATGAATCTATGTTTGGTATGATGGACGTAACGACTAATTAGAATGTCACTTTTCTACGTATTTGATTTCTTAGGGTCGTATAGGGAAACAGTAATACATTTTGAGGCCACATGAAACACATATTCTAGTACCATTCATTCGTATTTGGAGCCCTAACCCATTGAGGGCCTTTCTTGTAGTTATTTCTTTCATTACTTATTAGATCATTCTTCTTCTAGGGAGCTCATGTTCTTGGTTCTTCGGATGGTGGAAATCTCAAAAAAAGATGACGTTCTTTGTCTATTAAGTTATCCATGGATAGGCTCTTGAGGAAGATGCTTTTGGTTGGGCCTTTTGAAAGACATGTTATTAGGGGTATTTTAGCAAGTAGTTAGAGATTTTCTTAGGGTATTTGGTTATAAATAGAGAGAGGATGAAGGGGGGAATAATTAGACATTAATTTGGTGATTGAATTAGAGTTTGATAGAGATCTCAATGGGGAAGGTCCAAGTAGGGGTGTGCAAAAACCGAAAAAAACCGCGAAACTGTGAACCAAAACATGAATCAGGTTGGTTCGGTTCAAGAAATGAAACCGATGAAAATTGGTTTTCAATGGTTCTTCTTCGTTGTGAATCGATGACATCGATTTGGTTCATGGTTCAGCCGAAAACCAGACCGAACCGAACTGTGCACACCCCTAGGTCCAAGTACCTTAAATTGCTTGGTTATTTTATAAGTTTTCATCCTTTACATTAACATTGATTGTGTAATGCTTCCTACCAAATTGGTATAGAGTTGTTTCGGTTCTGGCTGTGAAGTTTGATGAAAGTTTGTGTGAATAAATAATGAAGAGTGTATGTGAAGGGTTGAAGGAATTGATAGATTGATGGCAAAAGCACATGAAGTCGATATTCCAATCTTTTTAAGATACAACTCAAAAGATTGAAGAGAAAATTGAATTAGCAAAAGGAAGAAAAGGAATCAAGAGTCTTATCTAGCCAGGGTGGAGTTGAAAGGGAAATTGATCAAGCAAAGAAGGAGAAATAAGAGCTGGTCGAAGAGGAAAGTCCTCATATAGACGCGAGGAAAAATAGAAAAAAAAGTAAGAATTTGTCGAGGAAGAATGAGGTTGTACGAAAGTGAAAGAAAGCACTCAGGAAGGATGATGGGTAATTTGAAAGGGTGCCTGGAAAAACATCGAGGAAGAAGGGTTGAGAAAGTCAGTTGCTAATTTTGCCAACATTTGAAAACATACGAGGGGTGTGAAATGCGTTTAAGGTGAAGGAGGCGAATTATCTAAGGGAGATATGTCATTGTCAGCAAGGAGCATTGTTGGCAAAATACGTCCGAAGGGAGACTATTGGCCATCGTTGTTTTGAAGGTTGGGGATGAAAAACTGGAAGCGATGTTGGCACCATGGTTGTGAGGAGGCAACAGAGAGATCGAGGGTGTACAATAAAGACGAAGATGTAAATAAAGAAGAAAGGTACCTACAGGCCTTCGCAGGCGGCAAGTGAAGGCATGCACGTAGATGAAAACTTGGGGAGGCACCAATGCAAGTTGGGGAAGATGGGCGTGTGCATATGAGGTTTGTTATCGATTGTCATGTGCATTGTGAGAATAAAAACGATCATGGAAGTAATCGAGCCCTAACTACTGCATTTCATTAAATGAATTGACGAGACTCACTTGTTTGGGTTGGATTCAAATAAGATTAGTAAGGGCCATTTCAAGTCAAAGGCAAAATTAGGATTTGTTATATAAGATTGAGTTTTGGGCTGGATTTGTCTATATTTTTAACCTTCAACCTGACTAGGGTTGGCATGGGTCTACACACGAAGGAATCCTAGTCGCTATAGTTCTCTTCCTTTATTGTTCACCTGTGTTGATGCCACATTCACTTACTAATGTATTGGCTTGACAACATCTATGTTCTTGCTGCCAACTCTCGATGCCTGTATTGTCGTTGTTGTTTACCACCCACACTTCACCATTTGTTGATTGCCAACACACAAGCTTGAGTTTCAAGTTTTTGAAGGGTGGCTTGGCTCTATGGATGCATTTTTTTTTTTTCCAAAAAAACTTCAGTTTGCTCTAAATCTAATTTTGGTTTTTGTTTTGTCTAACCACTCCTTGAGGATAAGGTGTGTTTAAGGGGCGGGTAATGATAGTAATGTCATTAAGGGTATATTAGTAATTAGATAAAGAATTTGTTAGGGTATTTTGTTATAAATAGAGAGGATGATGAAGAAAGGGGAAGTTAGACATTGTTTTGGTTAATGAATTAGAGTTTGAAATAGATATTTGGGAGGATCCAAGTACCTCGAATTATTTAGCTACCTTGTAAGTTTTCATTCTAGACGCCTCATTATAGTTGGATTTTGTACTAGTTCCTACCACCTCGTGTTGCATCATTTGTTAGAGGGTGGAGGAAGATTTGAATAATTAAGTTTGGAGTTGTGATTATGCTCAGTTGGTATGGAATTACTTCAGGGGTAGGGAAATTTTTTATGGCAAGCCAGGGTGTGTGCTTTATTGTGGGATTTTTTATCGGAAAGAATGATAGGATTTTGAGAGGGATTGATATTTGATCCCTTGTGAGATTTAATGTTTCTCCTAGGTGGCGGTGACAAGTTCCTTTTGTAATTATTTGCTTGGTCTTATTGTATTTGATTGGAGTCCTTTGCTATAGGGTTGCTCCTTCTTGTGGCCTTCGTGTGTGTATGAGTTTGTATGCCCTTGTATTTTTTCATTTCTTCTTAATCGGAGTTGGTCTTTTATTAATATATATATTATATTCCACTACACAGTTCATTAGTTCTTGAAACTGTACTATGTTGTTGAAGCTGTGCATTTTGGGGCTTCTAAACCTGATGTTGGACATCGAGTGCATAGGGGCTAGCTTGGGTTGTTTTTTTTTTGTTATTATTATTTTTTTTTTGCTCTTTTCGCCATTGCATTTATGATCTTGAATTTGTGGAAGTAAGAGATAGATATTCAACTCGTGAATAATATTTATATTTACTAATGTAATTGATTTCAATGATCCATCTATCTATTTACATGTTTATTATCGTCTATTCCGTCTGAAGAAATTTGTTTGACCAACTTCTGCATCTCTATTTCTTTTGATGATTATAGCTGAGGAGTGTCATTGATCCCAAGAGACACTACAAAAAGGGTGATTCAAAATCAAAAACACTTCCCAAATATTTCCAGGCAAGTTTTGAATTTCACGAGTATTTTACTAATTTTATACATTGGCAAAAGTAAAATTTTCTTATTTGACTTAATTTACAGCGTATATATCTGCTTAGAACCTATGTAATGTTTTAAGTATTTATCAGGTGGGAACTGTGGTTGAGTCTTCTTTGGACTTCTTCACGGGTAGATTAACAAAGAAGGAAAGGAAAGCAACGCTTGCAGACGAACTGCTATCTGACCAGGCTCTCACTCAGTACAGGTTTGATCTTTATCATGTCCTTTTGCTATTGCTAAATTTTCCAGTGAAGAAAAAGAAATGGGGAAGTATATGGCTACCCATTTTGAATTCTACAAATTATCCATTCCTAGGCTATGGTTGCTTCCTGAGAATCACTTGCATGGGGGACGTCATTTTTTATACATGTTAAGAAGTTAAACTTAGATCTGAAAAATTGTATTCTAATGAAACAATGGTGGAGCGTGATCGGGCTCTTATCTTATCATTTTTGTATCCCTCAAAACAGATTGTAGTGATAATGTCTTCTTAACCAGTTTTTTTCATAGACTCTCACATCATAATTTTGAAGATTCTTTTGCTTCAAGTCGGAATGTAATAATTCTGGTGCATTACCAAGCATTTTGTTGTGCTTATGTTTTTTTAAAAACCTCTTGCAGGAAACGCAAAGTTCAAGAAATTGAAGAGCAGAATCGACCTGCTGGCAACGATAAATGGAAAATAAGGGGTCGTCATTCACAAAAACGGGCAAAGGATAGGAGGCAGTAGTTAAGCTACCTCAAAATTTTGACGTGTAAGCCATATAAACACAGCAGGATCGAATCAAGCTAGGTGGGTGGGGTTTGTGACCCAGTGTGATACAATAGTAGGCGAATTCATCATTTGTACTGCCGGCTCCAACTTGATTTATGGGCTAGGTGAAGTCCTTCAAATATTCCCCCCTATTGAATTGATGATTTGTATTAGGAGTAGAAATGTTCTTCAGGTTATTTTATTGAACCTGTATTTAAGAAATTTTGTTTATTTGCCACCAAGTATAACGACGTATTATTGGGGAAAAAAAGTTGGGAAGAAAGTGCTTTTTGGGGAACAAATGTGTGCTGTCCATAAACCATGGAGAATACGAACATAACTTATGATTGACTTTTTGTGTGTTTGAAAAAGTTTTAAAAGGAATTTTATTGAGTTGAAACTTGAAAAGAAAAAAAGTTAAATGGTAACAATTTGATAATCAGATGGTTTGAT

mRNA sequence

ATGGACGATATGGACATATGGTATCGATGTGGGAACTTTGTCAACTCTTTGGGCCTTTTTGTTGAGATGTTGAACACCTTCCTCCTTCAAATGAATTTGGTTTTTTTATGCTTTGCAGGGTGGGATAGACACCAACGAACTATTGGGTCACATCCCAAAGAGTCCCCTAGTTCAAATGAGTGGACATCCAATACTTATGTTGCTTGGAATTCTACCATGAAATTCAGTGTCTTCCCCAATCTCACGATCTTGCACTGCGCAAGACGGGTTAAGCCTTGGGCTTGTTCGCTTGGAGGTCGTCTTCGTGGGCTTGCCGTGTTAAGCCGCCGTCCACCGTTCGTTGTGGAAGTCATGTCAGAAAGAAAGCCTATCATTGGCCTCTCTTGGGAGCCAAAGCTGCCCGCCTCCTCATCGGGGATCAGAACTAAAACTTGTGATAAATCTAACAGTCAAGCAGAAAACAGTCTTGTTTGGAAAACCAACTCAGAGCTTGTTGATGGGCTGTTTGTTCCACCAAACAAACCAAAAAAATTGAACAAGTTATTGAGAAAGCAAGTCAGCGACACGGCTGGGAGGAATTGGTTTGACATGCCAGCACAAACCGTGACCCCTGAAGTGGAAAAAGATTTGCGCTTGTTGAAGGTGGGAACTGTGGTTGAGTCTTCTTTGGACTTCTTCACGGGTAGATTAACAAAGAAGGAAAGGAAAGCAACGCTTGCAGACGAACTGCTATCTGACCAGGCTCTCACTCAGTACAGGAAACGCAAAGTTCAAGAAATTGAAGAGCAGAATCGACCTGCTGGCAACGATAAATGGAAAATAAGGGGTCGTCATTCACAAAAACGGGCAAAGGATAGGAGGCAGTAGTTAAGCTACCTCAAAATTTTGACGTGTAAGCCATATAAACACAGCAGGATCGAATCAAGCTAGGTGGGTGGGGTTTGTGACCCAGTGTGATACAATAGTAGGCGAATTCATCATTTGTACTGCCGGCTCCAACTTGATTTATGGGCTAGGTGAAGTCCTTCAAATATTCCCCCCTATTGAATTGATGATTTGTATTAGGAGTAGAAATGTTCTTCAGGTTATTTTATTGAACCTGTATTTAAGAAATTTTGTTTATTTGCCACCAAGTATAACGACGTATTATTGGGGAAAAAAAGTTGGGAAGAAAGTGCTTTTTGGGGAACAAATGTGTGCTGTCCATAAACCATGGAGAATACGAACATAACTTATGATTGACTTTTTGTGTGTTTGAAAAAGTTTTAAAAGGAATTTTATTGAGTTGAAACTTGAAAAGAAAAAAAGTTAAATGGTAACAATTTGATAATCAGATGGTTTGAT

Coding sequence (CDS)

ATGGACGATATGGACATATGGTATCGATGTGGGAACTTTGTCAACTCTTTGGGCCTTTTTGTTGAGATGTTGAACACCTTCCTCCTTCAAATGAATTTGGTTTTTTTATGCTTTGCAGGGTGGGATAGACACCAACGAACTATTGGGTCACATCCCAAAGAGTCCCCTAGTTCAAATGAGTGGACATCCAATACTTATGTTGCTTGGAATTCTACCATGAAATTCAGTGTCTTCCCCAATCTCACGATCTTGCACTGCGCAAGACGGGTTAAGCCTTGGGCTTGTTCGCTTGGAGGTCGTCTTCGTGGGCTTGCCGTGTTAAGCCGCCGTCCACCGTTCGTTGTGGAAGTCATGTCAGAAAGAAAGCCTATCATTGGCCTCTCTTGGGAGCCAAAGCTGCCCGCCTCCTCATCGGGGATCAGAACTAAAACTTGTGATAAATCTAACAGTCAAGCAGAAAACAGTCTTGTTTGGAAAACCAACTCAGAGCTTGTTGATGGGCTGTTTGTTCCACCAAACAAACCAAAAAAATTGAACAAGTTATTGAGAAAGCAAGTCAGCGACACGGCTGGGAGGAATTGGTTTGACATGCCAGCACAAACCGTGACCCCTGAAGTGGAAAAAGATTTGCGCTTGTTGAAGGTGGGAACTGTGGTTGAGTCTTCTTTGGACTTCTTCACGGGTAGATTAACAAAGAAGGAAAGGAAAGCAACGCTTGCAGACGAACTGCTATCTGACCAGGCTCTCACTCAGTACAGGAAACGCAAAGTTCAAGAAATTGAAGAGCAGAATCGACCTGCTGGCAACGATAAATGGAAAATAAGGGGTCGTCATTCACAAAAACGGGCAAAGGATAGGAGGCAGTAG

Protein sequence

MDDMDIWYRCGNFVNSLGLFVEMLNTFLLQMNLVFLCFAGWDRHQRTIGSHPKESPSSNEWTSNTYVAWNSTMKFSVFPNLTILHCARRVKPWACSLGGRLRGLAVLSRRPPFVVEVMSERKPIIGLSWEPKLPASSSGIRTKTCDKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKVGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDKWKIRGRHSQKRAKDRRQ

Homology

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BLAST of CmUC06G110110 vs. NCBI nr
Match: XP_038876081.1 (rRNA-processing protein fcf2 [Benincasa hispida] >XP_038876082.1 rRNA-processing protein fcf2 [Benincasa hispida])

HSP 1 Score: 305.4 bits (781), Expect = 5.0e-79
Identity = 161/196 (82.14%), Postives = 166/196 (84.69%), Query Frame = 0


Query: 118 MSERKPIIGLSWEPKLPASSSGIRTKTCDKSNSQAENSLVWKTNSELVDGLFVPPNKPKK 177
           MSE+KPIIGLSWEPKLPASSSGIRTK CDKSN+QAEN LVWKTNSELVDGLFVPPN PKK
Sbjct: 1   MSEKKPIIGLSWEPKLPASSSGIRTKACDKSNTQAENGLVWKTNSELVDGLFVPPNNPKK 60

Query: 178 LNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK----------------------- 237
           LNKLLRKQV DTAGRNWFDMPAQT+TPEVEKDLRLLK                       
Sbjct: 61  LNKLLRKQVRDTAGRNWFDMPAQTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 238 ---VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDK 288
              VGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDK 180

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BLAST of CmUC06G110110 vs. NCBI nr
Match: XP_008459856.1 (PREDICTED: rRNA-processing protein fcf2 [Cucumis melo])

HSP 1 Score: 300.4 bits (768), Expect = 1.6e-77
Identity = 157/196 (80.10%), Postives = 166/196 (84.69%), Query Frame = 0


Query: 118 MSERKPIIGLSWEPKLPASSSGIRTKTCDKSNSQAENSLVWKTNSELVDGLFVPPNKPKK 177
           MSERKPIIGLSWEPKLPASSSGI+TKTCDKSN+QAEN +VWK+NSELVDGLFVPPN PKK
Sbjct: 1   MSERKPIIGLSWEPKLPASSSGIKTKTCDKSNNQAENGIVWKSNSELVDGLFVPPNNPKK 60

Query: 178 LNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK----------------------- 237
           LNKLLRKQVSDTAGRNWFDMPA+T+TPEVEKDLRLLK                       
Sbjct: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 238 ---VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDK 288
              VGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKV+EIEEQNRP GNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK 180

[Close]

BLAST of CmUC06G110110 vs. NCBI nr
Match: XP_011656806.1 (rRNA-processing protein fcf2 [Cucumis sativus] >KGN46455.1 hypothetical protein Csa_005413 [Cucumis sativus])

HSP 1 Score: 296.2 bits (757), Expect = 3.1e-76
Identity = 156/196 (79.59%), Postives = 164/196 (83.67%), Query Frame = 0


Query: 118 MSERKPIIGLSWEPKLPASSSGIRTKTCDKSNSQAENSLVWKTNSELVDGLFVPPNKPKK 177
           MS+ KPIIGLSWEPKLPASSSGI+ KTCDKSNSQAEN LVWK+NSELVDGLFVPPN PKK
Sbjct: 1   MSKGKPIIGLSWEPKLPASSSGIKAKTCDKSNSQAENGLVWKSNSELVDGLFVPPNNPKK 60

Query: 178 LNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK----------------------- 237
           LNKLLRKQVSDTAGRNWFDMPA+T+TPEVEKDLRLLK                       
Sbjct: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 238 ---VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDK 288
              VGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKV+EIEEQNRP GNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK 180

[Close]

BLAST of CmUC06G110110 vs. NCBI nr
Match: XP_023005116.1 (rRNA-processing protein fcf2-like [Cucurbita maxima])

HSP 1 Score: 289.3 bits (739), Expect = 3.7e-74
Identity = 152/197 (77.16%), Postives = 162/197 (82.23%), Query Frame = 0


Query: 117 VMSERKPIIGLSWEPKLPASSSGIRTKTCDKSNSQAENSLVWKTNSELVDGLFVPPNKPK 176
           +MS +KP+I LSWEPKLP SSSGI+TK CDKS+SQAEN LVWK NSELVDGLFVPPN PK
Sbjct: 1   MMSGKKPVISLSWEPKLPTSSSGIKTKACDKSHSQAENGLVWKNNSELVDGLFVPPNNPK 60

Query: 177 KLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK---------------------- 236
           KLNKLLRKQVSDTAGR+WFDMPAQT+TPE+EKDLRLLK                      
Sbjct: 61  KLNKLLRKQVSDTAGRSWFDMPAQTMTPEMEKDLRLLKLRSVIDPKRHYKKGDSKSKTLP 120

Query: 237 ----VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGND 288
               VGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRP GND
Sbjct: 121 KYFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPGGND 180

[Close]

BLAST of CmUC06G110110 vs. NCBI nr
Match: XP_022155405.1 (rRNA-processing protein fcf2 [Momordica charantia])

HSP 1 Score: 287.7 bits (735), Expect = 1.1e-73
Identity = 151/196 (77.04%), Postives = 164/196 (83.67%), Query Frame = 0


Query: 118 MSERKPIIGLSWEPKLPASSSGIRTKTCDKSNSQAENSLVWKTNSELVDGLFVPPNKPKK 177
           MSE+KP+IGLSWEPKL  SSSGI+TKTCDKS+ Q E+SLVWKTN+ELVDGLFVPPN PKK
Sbjct: 1   MSEKKPVIGLSWEPKLATSSSGIKTKTCDKSHIQPESSLVWKTNTELVDGLFVPPNNPKK 60

Query: 178 LNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK----------------------- 237
           LNKLLRKQVSDTAGR+WFDMPAQT+TPE+EKDLRLLK                       
Sbjct: 61  LNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 238 ---VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDK 288
              VGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKV+EIEE NRPAGNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEELNRPAGNDK 180

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BLAST of CmUC06G110110 vs. ExPASy Swiss-Prot
Match: O42877 (rRNA-processing protein fcf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=fcf2 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.7e-11
Identity = 46/131 (35.11%), Postives = 67/131 (51.15%), Query Frame = 0


Query: 183 RKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK------------------------VGTV 242
           +K + DTAG NWFDMPA  +T  V++D++LLK                        VG++
Sbjct: 104 KKNIKDTAGSNWFDMPATELTESVKRDIQLLKMRNALDPKRHYRRENTKSMPKYFQVGSI 163

Query: 243 VESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDKWKIRGRH 289
           VE   DF++ R+  +ERK T+ DELL D     Y K+K  E++         K K+ GR 
Sbjct: 164 VEGPQDFYSSRIPTRERKETIVDELLHDSERRSYFKKKYLELQ---------KSKMSGRK 223

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BLAST of CmUC06G110110 vs. ExPASy Swiss-Prot
Match: Q8R2M2 (Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Mus musculus OX=10090 GN=Dnttip2 PE=1 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.0e-10
Identity = 42/117 (35.90%), Postives = 58/117 (49.57%), Query Frame = 0


Query: 170 VPPNKPKK--LNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK------------- 229
           VPP    K  L K  RK+   TAG  WF M A  +T E++ DLR LK             
Sbjct: 621 VPPYSESKHRLQKQRRKERQKTAGNGWFGMKAPELTDELKNDLRALKMRAGMDPKRFYKK 680

Query: 230 -----------VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEI 261
                      VGT+V++  DF+  R+ KK+RK T+ +ELL+D    ++ +RK  EI
Sbjct: 681 NDRDGFPKYFQVGTIVDNPADFYHSRIPKKQRKKTIVEELLADSEFRRFNRRKYSEI 737

[Close]

BLAST of CmUC06G110110 vs. ExPASy Swiss-Prot
Match: Q0P5H2 (Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Bos taurus OX=9913 GN=DNTTIP2 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.8e-10
Identity = 45/149 (30.20%), Postives = 70/149 (46.98%), Query Frame = 0


Query: 140 IRTKTCDKSNSQAENSLVWKT--NSELVDGLFVPP--NKPKKLNKLLRKQVSDTAGRNWF 199
           +  +T  +   + ++ L+ KT    E      VPP      KL K  R++   TAG  WF
Sbjct: 597 LNKRTLTQMKEKRKDELLQKTVITPEFEKNYCVPPYSESKYKLQKKRRQERQKTAGDGWF 656

Query: 200 DMPAQTVTPEVEKDLRLLK------------------------VGTVVESSLDFFTGRLT 259
            M A  +T E++ DL+ LK                        +GT+V++  DF+  R+ 
Sbjct: 657 GMKAPELTDELKNDLKALKMRASMDPKRFYKKNDRDGFPKYFQIGTIVDNPADFYHSRVP 716

Query: 260 KKERKATLADELLSDQALTQYRKRKVQEI 261
           KK+RK T+ +ELL+D    +Y +RK  EI
Sbjct: 717 KKQRKRTIVEELLADSEFRRYNRRKYSEI 745

[Close]

BLAST of CmUC06G110110 vs. ExPASy Swiss-Prot
Match: Q5QJE6 (Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Homo sapiens OX=9606 GN=DNTTIP2 PE=1 SV=2)

HSP 1 Score: 67.8 bits (164), Expect = 2.3e-10
Identity = 41/117 (35.04%), Postives = 58/117 (49.57%), Query Frame = 0


Query: 170 VPPNKPKK--LNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK------------- 229
           VPP    K  L K  RK+   TAG  WF M A  +T E++ DL+ LK             
Sbjct: 619 VPPYSESKYQLQKKRRKERQKTAGDGWFGMKAPEMTNELKNDLKALKMRASMDPKRFYKK 678

Query: 230 -----------VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEI 261
                      +GT+V++  DF+  R+ KK+RK T+ +ELL+D    +Y +RK  EI
Sbjct: 679 NDRDGFPKYFQIGTIVDNPADFYHSRIPKKQRKRTIVEELLADSEFRRYNRRKYSEI 735

[Close]

BLAST of CmUC06G110110 vs. ExPASy Swiss-Prot
Match: Q12035 (rRNA-processing protein FCF2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=FCF2 PE=1 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 4.2e-04
Identity = 23/68 (33.82%), Postives = 42/68 (61.76%), Query Frame = 0


Query: 215 VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDKWKI 274
           +GT++E   +F++ R+ +KERK+T+ + L+ D+A  +Y KRK  EI+E++       +K 
Sbjct: 149 IGTIIEDKSEFYSSRMNRKERKSTILETLMGDEASNKYFKRKYNEIQEKSTSGRKAHYKK 208

Query: 275 RGRHSQKR 283
                +KR
Sbjct: 209 MKEMRKKR 216

[Close]

BLAST of CmUC06G110110 vs. ExPASy TrEMBL
Match: A0A1S3CB58 (rRNA-processing protein fcf2 OS=Cucumis melo OX=3656 GN=LOC103498854 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 7.8e-78
Identity = 157/196 (80.10%), Postives = 166/196 (84.69%), Query Frame = 0


Query: 118 MSERKPIIGLSWEPKLPASSSGIRTKTCDKSNSQAENSLVWKTNSELVDGLFVPPNKPKK 177
           MSERKPIIGLSWEPKLPASSSGI+TKTCDKSN+QAEN +VWK+NSELVDGLFVPPN PKK
Sbjct: 1   MSERKPIIGLSWEPKLPASSSGIKTKTCDKSNNQAENGIVWKSNSELVDGLFVPPNNPKK 60

Query: 178 LNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK----------------------- 237
           LNKLLRKQVSDTAGRNWFDMPA+T+TPEVEKDLRLLK                       
Sbjct: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 238 ---VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDK 288
              VGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKV+EIEEQNRP GNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK 180

[Close]

BLAST of CmUC06G110110 vs. ExPASy TrEMBL
Match: A0A0A0K9M7 (Fcf2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G094730 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 1.5e-76
Identity = 156/196 (79.59%), Postives = 164/196 (83.67%), Query Frame = 0


Query: 118 MSERKPIIGLSWEPKLPASSSGIRTKTCDKSNSQAENSLVWKTNSELVDGLFVPPNKPKK 177
           MS+ KPIIGLSWEPKLPASSSGI+ KTCDKSNSQAEN LVWK+NSELVDGLFVPPN PKK
Sbjct: 1   MSKGKPIIGLSWEPKLPASSSGIKAKTCDKSNSQAENGLVWKSNSELVDGLFVPPNNPKK 60

Query: 178 LNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK----------------------- 237
           LNKLLRKQVSDTAGRNWFDMPA+T+TPEVEKDLRLLK                       
Sbjct: 61  LNKLLRKQVSDTAGRNWFDMPAKTMTPEVEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 238 ---VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDK 288
              VGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKV+EIEEQNRP GNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEEQNRPGGNDK 180

[Close]

BLAST of CmUC06G110110 vs. ExPASy TrEMBL
Match: A0A6J1KU17 (rRNA-processing protein fcf2-like OS=Cucurbita maxima OX=3661 GN=LOC111498206 PE=4 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.8e-74
Identity = 152/197 (77.16%), Postives = 162/197 (82.23%), Query Frame = 0


Query: 117 VMSERKPIIGLSWEPKLPASSSGIRTKTCDKSNSQAENSLVWKTNSELVDGLFVPPNKPK 176
           +MS +KP+I LSWEPKLP SSSGI+TK CDKS+SQAEN LVWK NSELVDGLFVPPN PK
Sbjct: 1   MMSGKKPVISLSWEPKLPTSSSGIKTKACDKSHSQAENGLVWKNNSELVDGLFVPPNNPK 60

Query: 177 KLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK---------------------- 236
           KLNKLLRKQVSDTAGR+WFDMPAQT+TPE+EKDLRLLK                      
Sbjct: 61  KLNKLLRKQVSDTAGRSWFDMPAQTMTPEMEKDLRLLKLRSVIDPKRHYKKGDSKSKTLP 120

Query: 237 ----VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGND 288
               VGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRP GND
Sbjct: 121 KYFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPGGND 180

[Close]

BLAST of CmUC06G110110 vs. ExPASy TrEMBL
Match: A0A6J1DMD6 (rRNA-processing protein fcf2 OS=Momordica charantia OX=3673 GN=LOC111022552 PE=4 SV=1)

HSP 1 Score: 287.7 bits (735), Expect = 5.3e-74
Identity = 151/196 (77.04%), Postives = 164/196 (83.67%), Query Frame = 0


Query: 118 MSERKPIIGLSWEPKLPASSSGIRTKTCDKSNSQAENSLVWKTNSELVDGLFVPPNKPKK 177
           MSE+KP+IGLSWEPKL  SSSGI+TKTCDKS+ Q E+SLVWKTN+ELVDGLFVPPN PKK
Sbjct: 1   MSEKKPVIGLSWEPKLATSSSGIKTKTCDKSHIQPESSLVWKTNTELVDGLFVPPNNPKK 60

Query: 178 LNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK----------------------- 237
           LNKLLRKQVSDTAGR+WFDMPAQT+TPE+EKDLRLLK                       
Sbjct: 61  LNKLLRKQVSDTAGRSWFDMPAQTMTPELEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 238 ---VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDK 288
              VGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKV+EIEE NRPAGNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVREIEELNRPAGNDK 180

[Close]

BLAST of CmUC06G110110 vs. ExPASy TrEMBL
Match: A0A6J1H9T2 (rRNA-processing protein fcf2-like OS=Cucurbita moschata OX=3662 GN=LOC111460917 PE=4 SV=1)

HSP 1 Score: 286.6 bits (732), Expect = 1.2e-73
Identity = 151/196 (77.04%), Postives = 160/196 (81.63%), Query Frame = 0


Query: 118 MSERKPIIGLSWEPKLPASSSGIRTKTCDKSNSQAENSLVWKTNSELVDGLFVPPNKPKK 177
           MS +KP+I LSWEPKLP SSSGI+TK CDKS+SQA N LVWK NSELVDGLFVPPN PKK
Sbjct: 1   MSGKKPVISLSWEPKLPTSSSGIKTKACDKSHSQAGNGLVWKNNSELVDGLFVPPNNPKK 60

Query: 178 LNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK----------------------- 237
           LNKLLRKQVSDTAGRNWFDMPAQT+TPE+EKDLRLLK                       
Sbjct: 61  LNKLLRKQVSDTAGRNWFDMPAQTMTPEMEKDLRLLKLRSVIDPKRHYKKGDSKSKTLPK 120

Query: 238 ---VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDK 288
              VGTVVESSLDFF+GRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRP GNDK
Sbjct: 121 YFQVGTVVESSLDFFSGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPGGNDK 180

[Close]

BLAST of CmUC06G110110 vs. TAIR 10
Match: AT5G30495.2 (Fcf2 pre-rRNA processing protein )

HSP 1 Score: 181.8 bits (460), Expect = 7.8e-46
Identity = 99/198 (50.00%), Postives = 133/198 (67.17%), Query Frame = 0


Query: 118 MSERKPIIGLSWEPKLPASSSGIRTKTCDKSNSQA---ENSLVWKTNSELVDGLFVPPNK 177
           M+E KP+IGL+WEPKLP  S  + TKTC  S+ +    E+S +W + SELVDGL +PPN 
Sbjct: 1   MAETKPLIGLTWEPKLPGLS--LDTKTCSTSSKRVESHESSSLWMSKSELVDGLCLPPND 60

Query: 178 PKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK-------------------- 237
           PKK+NK++RKQ+ DT G NWFDMPA T+TPE+++DL+LLK                    
Sbjct: 61  PKKINKMIRKQIKDTTGSNWFDMPAPTMTPELKRDLQLLKLRTVMDPAVHYKKSVSRSKL 120

Query: 238 ------VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAG 287
                 +GTV+E + +F+ GRLTKK RKATLADEL+SD  ++QYRKRKV+EIEE++R   
Sbjct: 121 AEKYFQIGTVIEPAEEFY-GRLTKKNRKATLADELVSDPKVSQYRKRKVKEIEEKSRAVT 180

[Close]

BLAST of CmUC06G110110 vs. TAIR 10
Match: AT5G30495.1 (Fcf2 pre-rRNA processing protein )

HSP 1 Score: 181.8 bits (460), Expect = 7.8e-46
Identity = 99/198 (50.00%), Postives = 133/198 (67.17%), Query Frame = 0


Query: 118 MSERKPIIGLSWEPKLPASSSGIRTKTCDKSNSQA---ENSLVWKTNSELVDGLFVPPNK 177
           M+E KP+IGL+WEPKLP  S  + TKTC  S+ +    E+S +W + SELVDGL +PPN 
Sbjct: 1   MAETKPLIGLTWEPKLPGLS--LDTKTCSTSSKRVESHESSSLWMSKSELVDGLCLPPND 60

Query: 178 PKKLNKLLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLK-------------------- 237
           PKK+NK++RKQ+ DT G NWFDMPA T+TPE+++DL+LLK                    
Sbjct: 61  PKKINKMIRKQIKDTTGSNWFDMPAPTMTPELKRDLQLLKLRTVMDPAVHYKKSVSRSKL 120

Query: 238 ------VGTVVESSLDFFTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAG 287
                 +GTV+E + +F+ GRLTKK RKATLADEL+SD  ++QYRKRKV+EIEE++R   
Sbjct: 121 AEKYFQIGTVIEPAEEFY-GRLTKKNRKATLADELVSDPKVSQYRKRKVKEIEEKSRAVT 180

[Close]

BLAST of CmUC06G110110 vs. TAIR 10
Match: AT1G54770.1 (Fcf2 pre-rRNA processing protein )

HSP 1 Score: 158.3 bits (399), Expect = 9.3e-39
Identity = 89/192 (46.35%), Postives = 120/192 (62.50%), Query Frame = 0


Query: 121 RKPIIGLSWEPKLPASSSGIRTKTCDKSNSQAENSLVWKTNSELVDGLFVPPNKPKKLNK 180
           ++P+IGL WEPKLP  S  ++T +     +++       + SELVDGL +PPN P+K+NK
Sbjct: 5   KQPLIGLKWEPKLPGLSLDLKTGSTRSKTAES-------SKSELVDGLCLPPNDPRKINK 64

Query: 181 LLRKQVSDTAGRNWFDMPAQTVTPEVEKDLRLLKVGTVVESSLDF--------------- 240
           ++RKQ+ DT G NWFDMPA T+TPE+++DL+LLK+ TV++ +L +               
Sbjct: 65  MIRKQLKDTTGSNWFDMPAPTMTPELKRDLQLLKLRTVMDPALHYKKSVSRSKLAEKYFQ 124

Query: 241 ----------FTGRLTKKERKATLADELLSDQALTQYRKRKVQEIEEQNRPAGNDKWKIR 288
                     F GRLTKK RKATLADEL+SD     YRKRKV+EIEE++R   N KW  +
Sbjct: 125 IGTVIEPAEEFYGRLTKKNRKATLADELVSDPKTALYRKRKVREIEEKSRAVTNKKWNKK 184

The following BLAST results are available for this feature:

BLAST of CmUC06G110110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876081.1	5.0e-79	82.14	rRNA-processing protein fcf2 [Benincasa hispida] >XP_038876082.1 rRNA-processing...	[more]
XP_008459856.1	1.6e-77	80.10	PREDICTED: rRNA-processing protein fcf2 [Cucumis melo]	[more]
XP_011656806.1	3.1e-76	79.59	rRNA-processing protein fcf2 [Cucumis sativus] >KGN46455.1 hypothetical protein ...	[more]
XP_023005116.1	3.7e-74	77.16	rRNA-processing protein fcf2-like [Cucurbita maxima]	[more]
XP_022155405.1	1.1e-73	77.04	rRNA-processing protein fcf2 [Momordica charantia]	[more]

BLAST of CmUC06G110110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O42877	4.7e-11	35.11	rRNA-processing protein fcf2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 248...	[more]
Q8R2M2	1.0e-10	35.90	Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Mus musculus OX=10...	[more]
Q0P5H2	1.8e-10	30.20	Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Bos taurus OX=9913...	[more]
Q5QJE6	2.3e-10	35.04	Deoxynucleotidyltransferase terminal-interacting protein 2 OS=Homo sapiens OX=96...	[more]
Q12035	4.2e-04	33.82	rRNA-processing protein FCF2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S...	[more]

BLAST of CmUC06G110110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CB58	7.8e-78	80.10	rRNA-processing protein fcf2 OS=Cucumis melo OX=3656 GN=LOC103498854 PE=4 SV=1	[more]
A0A0A0K9M7	1.5e-76	79.59	Fcf2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G094730 PE=4 S...	[more]
A0A6J1KU17	1.8e-74	77.16	rRNA-processing protein fcf2-like OS=Cucurbita maxima OX=3661 GN=LOC111498206 PE...	[more]
A0A6J1DMD6	5.3e-74	77.04	rRNA-processing protein fcf2 OS=Momordica charantia OX=3673 GN=LOC111022552 PE=4...	[more]
A0A6J1H9T2	1.2e-73	77.04	rRNA-processing protein fcf2-like OS=Cucurbita moschata OX=3662 GN=LOC111460917 ...	[more]

BLAST of CmUC06G110110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G30495.2	7.8e-46	50.00	Fcf2 pre-rRNA processing protein	[more]
AT5G30495.1	7.8e-46	50.00	Fcf2 pre-rRNA processing protein	[more]
AT1G54770.1	9.3e-39	46.35	Fcf2 pre-rRNA processing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014810	Fcf2 pre-rRNA processing, C-terminal	PFAM	PF08698	Fcf2	coord: 188..214 e-value: 8.5E-6 score: 26.0 coord: 214..256 e-value: 8.7E-10 score: 38.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..288
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..274
IPR039883	Fcf2/DNTTIP2	PANTHER	PTHR21686	UNCHARACTERIZED	coord: 215..283 coord: 123..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC06G110110.1	CmUC06G110110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005730	nucleolus