CmUC05G100640 (gene) Watermelon (USVL531) v1

Overview
NameCmUC05G100640
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionTransmembrane protein 147
LocationCmU531Chr05: 29858027 .. 29858665 (+)
RNA-Seq ExpressionCmUC05G100640
SyntenyCmUC05G100640
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATCTAGACATAAATCCATATCAAGCTCATACCAAGATGACTCATCCATTTTCAACGTCTTCTGGGAGAGGTCTATGCCAAGGTGATAGGTTATTTATTGAGTCAACTTATTCGAGGTTGAGAGAGGTTTTGATCGAGGTGGTGGGTTTTGTTGCTGAGTCGACATGTCCAAACTAAGCCAACTTGCAAGGGAGAAATTCTCACCAATGTAGAATTTTTCCATCACACACTTAGATGCATAAGTGAGTATTAGATTAGATTATGAGTTGAACTAGATGAAATTGTTTTATACATAACTATAGTTTAATTAATATAGTATTATTATTAAAACTTACCGCAACACTACCAACTAGAAGTAGTTTGTAATAGCCAATTTGTGTAATCATTACTTAGTTTTAATTACAATATATTTTTATTAAAAAAAAAAAAAAGAAATATATATATAAATATATTTTGTGCGAAGTGTTTGGGACTGATGAGCGAATATCAGGGGGAGGCCTTCGCCGGATCGCGCTGAACTTTTGGAGAGCAAAGCAACAGCGGAAGAGAGCAACGATGACGGTGTTTCATTTCTTCAACTGTGCGATTCTCACTTTCGGTCCTCATGCTGTCTACTACTCTGCAACGCCCTTGTAA

mRNA sequence

ATGAATCTAGACATAAATCCATATCAAGCTCATACCAAGATGACTCATCCATTTTCAACGTCTTCTGGGAGAGGTCTATGCCAAGGGGGAGGCCTTCGCCGGATCGCGCTGAACTTTTGGAGAGCAAAGCAACAGCGGAAGAGAGCAACGATGACGGTGTTTCATTTCTTCAACTGTGCGATTCTCACTTTCGGTCCTCATGCTGTCTACTACTCTGCAACGCCCTTGTAA

Coding sequence (CDS)

ATGAATCTAGACATAAATCCATATCAAGCTCATACCAAGATGACTCATCCATTTTCAACGTCTTCTGGGAGAGGTCTATGCCAAGGGGGAGGCCTTCGCCGGATCGCGCTGAACTTTTGGAGAGCAAAGCAACAGCGGAAGAGAGCAACGATGACGGTGTTTCATTTCTTCAACTGTGCGATTCTCACTTTCGGTCCTCATGCTGTCTACTACTCTGCAACGCCCTTGTAA

Protein sequence

MNLDINPYQAHTKMTHPFSTSSGRGLCQGGGLRRIALNFWRAKQQRKRATMTVFHFFNCAILTFGPHAVYYSATPL
Homology
[Close]
BLAST of CmUC05G100640 vs. NCBI nr
Match: XP_018846615.1 (transmembrane protein 147-like [Juglans regia] >KAF5468346.1 hypothetical protein F2P56_012504 [Juglans regia])

HSP 1 Score: 67.8 bits (164), Expect = 4.7e-08
Identity = 29/42 (69.05%), Postives = 35/42 (83.33%), Query Frame = 0 

Query: 35 IALNFWRAKQQRKRATMTVFHFFNCAILTFGPHAVYYSATPL 77
          I+L F R +++ +   MT+FHFFNCAILTFGPHAVYYSATPL
Sbjct: 21 ISLGFLRKREREREERMTMFHFFNCAILTFGPHAVYYSATPL 62

[Close]
BLAST of CmUC05G100640 vs. NCBI nr
Match: RYR41456.1 (hypothetical protein Ahy_A08g037851 isoform A [Arachis hypogaea])

HSP 1 Score: 66.2 bits (160), Expect = 1.4e-07
Identity = 28/36 (77.78%), Postives = 33/36 (91.67%), Query Frame = 0 

Query: 41  RAKQQRKRATMTVFHFFNCAILTFGPHAVYYSATPL 77
           + K++R+R  MT+FHFFNCAILTFGPHAVYYSATPL
Sbjct: 408 KKKRRRRRRRMTLFHFFNCAILTFGPHAVYYSATPL 443

[Close]
BLAST of CmUC05G100640 vs. NCBI nr
Match: RYR41454.1 (hypothetical protein Ahy_A08g037851 isoform C [Arachis hypogaea])

HSP 1 Score: 66.2 bits (160), Expect = 1.4e-07
Identity = 28/36 (77.78%), Postives = 33/36 (91.67%), Query Frame = 0 

Query: 41  RAKQQRKRATMTVFHFFNCAILTFGPHAVYYSATPL 77
           + K++R+R  MT+FHFFNCAILTFGPHAVYYSATPL
Sbjct: 358 KKKRRRRRRRMTLFHFFNCAILTFGPHAVYYSATPL 393

[Close]
BLAST of CmUC05G100640 vs. NCBI nr
Match: PNY07985.1 (transmembrane protein 147-like protein, partial [Trifolium pratense])

HSP 1 Score: 64.7 bits (156), Expect = 3.9e-07
Identity = 29/31 (93.55%), Postives = 29/31 (93.55%), Query Frame = 0 

Query: 46 RKRATMTVFHFFNCAILTFGPHAVYYSATPL 77
          RKR  MTVFHFFNCAILTFGPHAVYYSATPL
Sbjct: 10 RKRDQMTVFHFFNCAILTFGPHAVYYSATPL 40

[Close]
BLAST of CmUC05G100640 vs. NCBI nr
Match: KAA3488848.1 (transmembrane protein 147-like protein [Gossypium australe])

HSP 1 Score: 64.3 bits (155), Expect = 5.2e-07
Identity = 31/43 (72.09%), Postives = 34/43 (79.07%), Query Frame = 0 

Query: 34 RIALNFWRAKQQRKRATMTVFHFFNCAILTFGPHAVYYSATPL 77
          R A+    AK  RK+  MT+FHFFNCAILTFGPHAVYYSATPL
Sbjct: 37 RFAIRLRLAKNYRKK--MTMFHFFNCAILTFGPHAVYYSATPL 77

[Close]
BLAST of CmUC05G100640 vs. ExPASy TrEMBL
Match: A0A2I4GRU0 (Transmembrane protein 147 OS=Juglans regia OX=51240 GN=LOC109010292 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 2.3e-08
Identity = 29/42 (69.05%), Postives = 35/42 (83.33%), Query Frame = 0 

Query: 35 IALNFWRAKQQRKRATMTVFHFFNCAILTFGPHAVYYSATPL 77
          I+L F R +++ +   MT+FHFFNCAILTFGPHAVYYSATPL
Sbjct: 21 ISLGFLRKREREREERMTMFHFFNCAILTFGPHAVYYSATPL 62

[Close]
BLAST of CmUC05G100640 vs. ExPASy TrEMBL
Match: A0A445BS37 (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase OS=Arachis hypogaea OX=3818 GN=Ahy_A08g037851 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 6.6e-08
Identity = 28/36 (77.78%), Postives = 33/36 (91.67%), Query Frame = 0 

Query: 41  RAKQQRKRATMTVFHFFNCAILTFGPHAVYYSATPL 77
           + K++R+R  MT+FHFFNCAILTFGPHAVYYSATPL
Sbjct: 408 KKKRRRRRRRMTLFHFFNCAILTFGPHAVYYSATPL 443

[Close]
BLAST of CmUC05G100640 vs. ExPASy TrEMBL
Match: A0A445BRZ0 (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase OS=Arachis hypogaea OX=3818 GN=Ahy_A08g037851 PE=3 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 6.6e-08
Identity = 28/36 (77.78%), Postives = 33/36 (91.67%), Query Frame = 0 

Query: 41  RAKQQRKRATMTVFHFFNCAILTFGPHAVYYSATPL 77
           + K++R+R  MT+FHFFNCAILTFGPHAVYYSATPL
Sbjct: 358 KKKRRRRRRRMTLFHFFNCAILTFGPHAVYYSATPL 393

[Close]
BLAST of CmUC05G100640 vs. ExPASy TrEMBL
Match: A0A2K3NY70 (Transmembrane protein 147 (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g004494 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.9e-07
Identity = 29/31 (93.55%), Postives = 29/31 (93.55%), Query Frame = 0 

Query: 46 RKRATMTVFHFFNCAILTFGPHAVYYSATPL 77
          RKR  MTVFHFFNCAILTFGPHAVYYSATPL
Sbjct: 10 RKRDQMTVFHFFNCAILTFGPHAVYYSATPL 40

[Close]
BLAST of CmUC05G100640 vs. ExPASy TrEMBL
Match: A0A5B6X4R7 (Transmembrane protein 147 OS=Gossypium australe OX=47621 GN=EPI10_032553 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.5e-07
Identity = 31/43 (72.09%), Postives = 34/43 (79.07%), Query Frame = 0 

Query: 34 RIALNFWRAKQQRKRATMTVFHFFNCAILTFGPHAVYYSATPL 77
          R A+    AK  RK+  MT+FHFFNCAILTFGPHAVYYSATPL
Sbjct: 37 RFAIRLRLAKNYRKK--MTMFHFFNCAILTFGPHAVYYSATPL 77

[Close]
BLAST of CmUC05G100640 vs. TAIR 10
Match: AT1G47640.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2053, membrane (InterPro:IPR019164); Has 204 Blast hits to 204 proteins in 84 species: Archae - 0; Bacteria - 0; Metazoa - 127; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 27 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 2.0e-09
Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 0 

Query: 51 MTVFHFFNCAILTFGPHAVYYSATPL 77
          MT+FHFFNCAILTFGPHAVYYSATPL
Sbjct: 1  MTLFHFFNCAILTFGPHAVYYSATPL 26

The following BLAST results are available for this feature:
BLAST of CmUC05G100640 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_018846615.14.7e-0869.05transmembrane protein 147-like [Juglans regia] >KAF5468346.1 hypothetical protei... [more]
RYR41456.11.4e-0777.78hypothetical protein Ahy_A08g037851 isoform A [Arachis hypogaea][more]
RYR41454.11.4e-0777.78hypothetical protein Ahy_A08g037851 isoform C [Arachis hypogaea][more]
PNY07985.13.9e-0793.55transmembrane protein 147-like protein, partial [Trifolium pratense][more]
KAA3488848.15.2e-0772.09transmembrane protein 147-like protein [Gossypium australe][more]
BLAST of CmUC05G100640 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC05G100640 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2I4GRU02.3e-0869.05Transmembrane protein 147 OS=Juglans regia OX=51240 GN=LOC109010292 PE=4 SV=1[more]
A0A445BS376.6e-0877.784-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase OS=Arachis hypogaea OX=... [more]
A0A445BRZ06.6e-0877.784-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase OS=Arachis hypogaea OX=... [more]
A0A2K3NY701.9e-0793.55Transmembrane protein 147 (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g004... [more]
A0A5B6X4R72.5e-0772.09Transmembrane protein 147 OS=Gossypium australe OX=47621 GN=EPI10_032553 PE=4 SV... [more]
BLAST of CmUC05G100640 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G47640.12.0e-0996.15unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC05G100640.1CmUC05G100640.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0016310 phosphorylation
biological_process GO:0016114 terpenoid biosynthetic process
cellular_component GO:0005789 endoplasmic reticulum membrane
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0050515 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity
molecular_function GO:0005524 ATP binding