CmUC05G098850 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC05G098850
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Unknown protein
Location	CmU531Chr05: 28395271 .. 28399840 (-)
RNA-Seq Expression	CmUC05G098850
Synteny	CmUC05G098850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTTTCCGGCGGTTTGCAACTTTGCTAGGGCAAACCTGGGGATCGTGGAGGCATCCGGTTGGAGAACCGGCTGCGTAATGGTCGAATCTTCTACGCATTTGAGGCATGATTCGTCCTCGTCGTCACTTTTAGTCATTGCACGCTTAGAGTTCTTGAATCGGATTCAATACGAGGTGGATTCAATCGGCTTCTGTCGAGGCGCTTAAATACTCTGCCTCCAAATAATCTAACCAATGTTGAAGCCTCTCGGCGAATTGGGGATAGACAGGTCCGATCATGAGTTCTTGTCGCGCCGAACAGCAGCGGTGGATGTCTGCGGAAATTTGTGAGTGCTGATTCTCAGGGAGGCCTGCTCTGCGTGGGGCAATGGAAAAAGAGGAGCAACACATTATGAAGGACGAGTCTACCTGCAGTTCTTGTTCTGCATTTGTACTGTACATTTGGGTACTATTTAGATCATGAGCTGCTTAAGGTTATGGCGGGTAATGAAAGGATCTTCACTTTGTGACAGTATAATTCTATTAAATTATTGTGTGATTAATGGAATGTAAAATCTGAAAGGATGCTGGTAATTGGCCAGACTTTTTAGAGACTAACCCTTTTGATCATTTTTGGAATTATTTGGTGATTCCATGTGCAAGACTCTGATTCAACCCCAGAAATGTTGAAAACAAAGTTGTTATAGATTTATCCCTTCTTTTTGTGTATGAAAGAACAGGCAAATTTTATTCCTTGTTGAATTACAACGTTGACGAGATGTTCAGAAGAATCTACTTGGTTTGACATTTTCCCCTTGCTGATGCATCGATAATTTCTTTTGAAGTAGATTAACTTTCTATTTGATTCATTCAATTCCCTAAAAATGAGATAAAGCTATACTGTTGGATTATTTTTTATGCTTGCTCTACCTCTACTCCTTTTGAGAATTCCTACAATAAACGAAGAAATAGAGCAGATTTAGCCTTATAATACATACTTTATTTTCTTCAATACCGATGGTACTCTGATAGGGATTTAAACCGCGAAAAGCTATGATTTCACTCAGTTAGAAGATTAGATCTCTTATTATAGATTACATAGTTTCTTTTTATCCATTTCAGTACACTTGCAGGTATCAATTAGATGAAATATACTTGTTCACATGTCATAACCGTTTAGGAATATAGTAGTGCATAGTTTTCCATTATTTGTTTGCATTGACATTGACTTTTTCATATAATGTCCCATTTGAACTGTTCAGCCGATGTTTTAAAATTTTGCAGGTCAGAGGGGACCATCACCACAAATTGTGCATTATATCAGTGTCAGCACGTTGGACTATTTCTGCTGGTACTGCTATGTATCAAATGAAAATTCTCTTAAGAATTCGTTTCAAGTGGAACATTAGCACGAAGAATTAAAGGAAGACCATATGTATTATATACATCTTTTCCCTGGATATGCATTTGAATACTTGGATATGGGGTTATCCTTCTTTATCTTATCCTGTTTGTGGGTGATATTCTGCTGTTAGTTGTTTTTCTATGTTGAAAATGTCTCTTAATTCATAATAGTTCCTATTAAATGTCACAGCCGCCTAGTACCATCTTGATATCTCCATAGAGTTTGTGATAATTTTGCTGACATCTTACATTTTAATAGATAGTTTCGAAGGGATCATCTGAGGCTGAGGCATCAAAGGTTGAAATTCTATATGCAAAGTACTAGCAATGTTTAGTGGGTCAATTTTTATGAAACGTGAATTTCATACTTGTCGTTGCGGTGAGAAAATAAAATGTGTGGAACTTTCCTCTTCCCGCATATTTTGAGCAACTATACCCGCTGCCCTCGTAGCCTTTTTTCCCTTTGCTCAATTTCAAAAACTCTTCCATTAAATGATTGAATGACATTACATTCAAACTTCTGGCTGCATAACCTTTTTCCCTTTGCCCAATTTTTTTTTTTTTTTTTTAAATCTTCCATGAAATTATTGAATGACATAACTTTCAACATTCTGGCTTCATAGCCTTTTTACCTTTGCTCGATATTGAAAAATCTTCCATAAATCTTAAAATTCTGGCTGAATGCTTTTTCATACAAAAAATTCAGCGTGAATACTGCTGGGGCGCCAAACTTTTAATTGGACCACAGGTTTCTTGCGCCAATTTATGTGTGGCCATATCTAGGCACTCTCCTCGTTGGTATCCATTGGAAAGTGAAGTTAAAATGTCATCCATTGGAAGAGGAATAACTCTCTCTTTCTCTCTCTTCTCTGTTCAATTTACTTTTATTGCTCATCGTTTCAAGTAAATTCTGTGTCATTGATGGTTTTACTTGGACAGCTTCCGGCATGCTCCCTTTCATTCGGAAGGATATCAATTGCTCCAGTTCAGAATGGAGAAGGTGACTGATCCACGACTATATCCTGTAGGTTAAATAGCCGCGGGGATGATTCTGAACTGACAAATAAAGTTACAGGCTGGGCTCTTTTACAATTCCTTTCTGTTACTAAGTTTAAAATAGTGCTCAAATGGCTGTTTGTCATGCATATCTTGTATTCTATGATAGTAATTTTGACCCAATTATCTTGAAGTAACTCCAATTTCAGGGTGCTTTGGAAGAAACCATATCCTGGGCTGGGGAAAATCAACAGCTTTTCCAACTTCGTGGCTATAAATTCCCAAGTTTTGTTTGGTTGCCTACTTCCATTATGTGGCTTTTCTTCTTTTAATATTTAAACTATTTGAATTAGACATTGGCTCTGTTCACATTTATACCTTGCGTTGGAATCTTATCTATGGAGGGCTAAATCAAACCACAACTCGTTCAAACATGGCTACATTTCTAATGTCATGTTGGCTTAGGAGAAATTATACTACACGAAATCAGGAATGGTTGGCTATGCTTAAAAATTGAAATTTGGTTCACCTACTTTTACTGACAATTTAGCTTCATCTGCAATGATTGGAATCTCATCTGTTCATGATTTTTCCAGGCCCAACATCAGCAGGCGACTGCTACCGTAGACGACTCTCATAATTGTTCATGAGATTGATGTTTAACCTGTTGTTTTAATTCTTTTATTATTACAAAACATTAAATGATAAATGGGTTATCTTATTGCAAGCATTAATTATTGACTAATTAGGTCTTGTTTAGGGATGCACATGGATCTTTGTAATACCATATCAATTTGGAAATCATGAATGTGACTTTCAATACAAAATGTAATTGCAATTTGGCAAGGTGGTAAAACTGGCAGGGGGGTATTTATTTAGTCATGTTGACTTAAATATTATTTGAAATTACTTGTATTTCTTAGTAATATTTGTGGCCGCGGCAACTCCAACGTGGTAAGTTGTATTGTAACCAATCTCTCTCTTATCCGAAGATAGTAATAGTTGATTCTTTAAAGTTCCACATATTTTGTCTCTCTTAATTTGTAATATTTTGTCTTAGTCCCTAAACTTGGAAATTATTTTTGTCCTTCATTAATCATTTTATTAATTTTGAGAACCAATTTCTGACGTGTAATGGGTTGAAGGATGGATTTTCTCTCTCTCTCTCTCTATCAATTCTTTTACCTGACATTGATTGAGGTTAATAGTATATGTCTTCAAAATGAGACAATTTAGAAAATTAATTTAAATAAACATAATAATAAAATATGACCGTCCTCCCTGAAATGTGGTTATCCATTATATGCAAGAAAAACAACCTTATCTAAGAGTTGAGAAAATAAAGTTTAAATTTTAAAAACAATGGTCCGAGCTTTGGGAAATTTCGGAATTGGATATAGACACGTAAGAAATGAGCTGGCAAATCCTTTCTAATGCCAGCTTCATGCTACTGTTTTATTCTTGCAATGACCTCAAACAAACGTGGCTTCATCAGCCTAAATTCAATTAACAAAATTAACAAAACTAATTTGTAAGTGCTTACCACATTTTCAAGAAAAAAAGAGAGTAAATAATACATGTCATTTATGATTATGAATATAATATTGCTTAGTCAAAACAGAGGCAAAATTTGAATTTCAAGTTAAAGGGAGGAATGCTTTACAAATATATATATATATATATATATTTTTTTTTTAATTAAAAAACTAGAAAAGAAAAAGAAAAAGAAAAGGCGTTATTTATTTATTTATTATTTTTTTCATGATTTGGCACATATCTAGCGAAGTTATAAATCAATTAAATCATATCATGTAACCTCAGACGATGCAAACTGTCCGATCCACTTACTTTCTTAAGATTCCAAATTAACAATAACTAAACTAATAATAAGAAATCAAATTGACTGTTTTGGTTCAATTGTCTACTTCTTTACAGCGTTGAACCCGGTGTTGCTGTTGATCAGACGGTCGAGAGGAAGGTGAAAATGGAATTGAACCGACAGATATGGGGGACCCAATTGATAAATTTCATGAGGGTATTCATAAAGGCGTGGACTTGGAGGGAAAATGAAGGGTCAGGATGAAGAGATGAGAATGGAAGAATGGTGGATGTGATTGCAGAGGATCGAGATGGCGTCATTGACTTGAGAAGAGAAAGGAAAGGGAAGAGAGACAAAAGAGTTAATTGA

mRNA sequence

ATGGATTTTCCGGCGGTTTGCAACTTTGCTAGGGCAAACCTGGGGATCGTGGAGGCATCCGGTTGGAGAACCGGCTGCGTAATGGTCGAATCTTCTACGCATTTGAGGCATGATTCGTCCTCGTCGTCACTTTTAGTCATTGCACGCTTAGAGTTCTTGAATCGGATTCAATACGAGCCTCTCGGCGAATTGGGGATAGACAGGTCCGATCATGAGTTCTTGTCGCGCCGAACAGCAGCGGTGGATGTCTGCGGAAATTTGACGAGTCTACCTGCAGTTCTTGTTCTGCATTTGTACTGTACATTTGGGTACTATTTAGATCATGAGCTGCTTAAGGTTATGGCGGGTCAGAGGGGACCATCACCACAAATTGTGCATTATATCAGTGTCAGCACGTTGGACTATTTCTGCTGCTTCCGGCATGCTCCCTTTCATTCGGAAGGATATCAATTGCTCCAGTTCAGAATGGAGAAGGTGACTGATCCACGACTATATCCTGTAGACGGTCGAGAGGAAGGTGAAAATGGAATTGAACCGACAGATATGGGGGACCCAATTGATAAATTTCATGAGGAGGATCGAGATGGCGTCATTGACTTGAGAAGAGAAAGGAAAGGGAAGAGAGACAAAAGAGTTAATTGA

Coding sequence (CDS)

ATGGATTTTCCGGCGGTTTGCAACTTTGCTAGGGCAAACCTGGGGATCGTGGAGGCATCCGGTTGGAGAACCGGCTGCGTAATGGTCGAATCTTCTACGCATTTGAGGCATGATTCGTCCTCGTCGTCACTTTTAGTCATTGCACGCTTAGAGTTCTTGAATCGGATTCAATACGAGCCTCTCGGCGAATTGGGGATAGACAGGTCCGATCATGAGTTCTTGTCGCGCCGAACAGCAGCGGTGGATGTCTGCGGAAATTTGACGAGTCTACCTGCAGTTCTTGTTCTGCATTTGTACTGTACATTTGGGTACTATTTAGATCATGAGCTGCTTAAGGTTATGGCGGGTCAGAGGGGACCATCACCACAAATTGTGCATTATATCAGTGTCAGCACGTTGGACTATTTCTGCTGCTTCCGGCATGCTCCCTTTCATTCGGAAGGATATCAATTGCTCCAGTTCAGAATGGAGAAGGTGACTGATCCACGACTATATCCTGTAGACGGTCGAGAGGAAGGTGAAAATGGAATTGAACCGACAGATATGGGGGACCCAATTGATAAATTTCATGAGGAGGATCGAGATGGCGTCATTGACTTGAGAAGAGAAAGGAAAGGGAAGAGAGACAAAAGAGTTAATTGA

Protein sequence

MDFPAVCNFARANLGIVEASGWRTGCVMVESSTHLRHDSSSSSLLVIARLEFLNRIQYEPLGELGIDRSDHEFLSRRTAAVDVCGNLTSLPAVLVLHLYCTFGYYLDHELLKVMAGQRGPSPQIVHYISVSTLDYFCCFRHAPFHSEGYQLLQFRMEKVTDPRLYPVDGREEGENGIEPTDMGDPIDKFHEEDRDGVIDLRRERKGKRDKRVN

Homology

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BLAST of CmUC05G098850 vs. NCBI nr
Match: XP_038897218.1 (uncharacterized protein LOC120085348 [Benincasa hispida])

HSP 1 Score: 82.8 bits (203), Expect = 3.9e-12
Identity = 41/55 (74.55%), Postives = 44/55 (80.00%), Query Frame = 0


Query: 87  LTSLPAVLVLHLYCTFGYYLDHELLKVMAGQRGPSPQIVHYISVSTLDYFC--CF 140
           + SLPAVLVLHLY TFGY L HELL+ MAGQRGPS Q V+Y SV TLDYFC  CF
Sbjct: 1   MMSLPAVLVLHLYSTFGYCLVHELLRFMAGQRGPSLQFVYYTSVRTLDYFCWYCF 55

The following BLAST results are available for this feature:

BLAST of CmUC05G098850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897218.1	3.9e-12	74.55	uncharacterized protein LOC120085348 [Benincasa hispida]	[more]

BLAST of CmUC05G098850 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC05G098850 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC05G098850 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..213
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 165..206

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC05G098850.1	CmUC05G098850.1	mRNA