CmUC05G095950 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC05G095950
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	calponin homology domain-containing protein DDB_G0272472 isoform X1
Location	CmU531Chr05: 24374011 .. 24374472 (-)
RNA-Seq Expression	CmUC05G095950
Synteny	CmUC05G095950

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGAGGAAGCTGCAGAAATAGAGGATCAAGCCCTAGCATCGGAATCTCAAATCCAATATCTTCAATCCTCTGTAAGAACATTTCTTCTAAAACTACACACAATTGGAAAGTAAAACTCCACTACCACAATCAATCTCTAAACCTAATATTCAAAATTCAATTTCAAAACACACACTAACACAAGAAAAAACTCAATACCTTGGCATTTATGATGAACTAACGATTGAAAATTCTGGTTGTGGTGGTAGGTTGAAGAATTCAAAAAGAAGGAAATGGTGCACAAAAGCAAAGTGAAGGAGATAGGGAGATTGGAGAAGAAGGGACAAGATTCACCACTAGATGAAATGGAGAAGCAGGTGTTGATTTGCCAAGTGAACAAGAAGAATCGTAACCTGCTCCTTCATGCAAGGGATGTTCGAAATAGGTGGAGAGAAAAATATATCTTACCAGACGAATGA

mRNA sequence

ATGAAAGAGGAAGCTGCAGAAATAGAGGATCAAGCCCTAGCATCGGAATCTCAAATCCAATATCTTCAATCCTCTGTTGAAGAATTCAAAAAGAAGGAAATGGTGCACAAAAGCAAAGTGAAGGAGATAGGGAGATTGGAGAAGAAGGGACAAGATTCACCACTAGATGAAATGGAGAAGCAGGTGTTGATTTGCCAAGTGAACAAGAAGAATCGTAACCTGCTCCTTCATGCAAGGGATGTTCGAAATAGGTGGAGAGAAAAATATATCTTACCAGACGAATGA

Coding sequence (CDS)

ATGAAAGAGGAAGCTGCAGAAATAGAGGATCAAGCCCTAGCATCGGAATCTCAAATCCAATATCTTCAATCCTCTGTTGAAGAATTCAAAAAGAAGGAAATGGTGCACAAAAGCAAAGTGAAGGAGATAGGGAGATTGGAGAAGAAGGGACAAGATTCACCACTAGATGAAATGGAGAAGCAGGTGTTGATTTGCCAAGTGAACAAGAAGAATCGTAACCTGCTCCTTCATGCAAGGGATGTTCGAAATAGGTGGAGAGAAAAATATATCTTACCAGACGAATGA

Protein sequence

MKEEAAEIEDQALASESQIQYLQSSVEEFKKKEMVHKSKVKEIGRLEKKGQDSPLDEMEKQVLICQVNKKNRNLLLHARDVRNRWREKYILPDE

Homology

[Close]

BLAST of CmUC05G095950 vs. NCBI nr
Match: XP_038900838.1 (golgin subfamily A member 6-like protein 7 [Benincasa hispida])

HSP 1 Score: 89.4 bits (220), Expect = 1.8e-14
Identity = 57/94 (60.64%), Postives = 67/94 (71.28%), Query Frame = 0


Query: 1   MKEEAAEIE-------DQALASESQIQYLQSSVEEFKKKEMVHKSKVKEIGRLEKKGQDS 60
           ++EE  E++       DQAL SESQIQ LQSSVEE+K+K M        I RL+KKGQ S
Sbjct: 337 VREEMEELQVSREFWKDQALKSESQIQSLQSSVEEWKEKAMA-------IERLKKKGQGS 396

Query: 61  PLDEMEKQVLICQVNKKNRNLLLHARDVRNRWRE 88
           P DEMEK VLIC+V +KN NLLLHARDVR+R RE
Sbjct: 397 PPDEMEKHVLICRVKEKNHNLLLHARDVRSRRRE 423

[Close]

BLAST of CmUC05G095950 vs. NCBI nr
Match: XP_016900742.1 (PREDICTED: uncharacterized protein LOC103491502 isoform X3 [Cucumis melo])

HSP 1 Score: 86.7 bits (213), Expect = 1.2e-13
Identity = 57/95 (60.00%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 1   MKEEAAEIE-------DQALASESQIQYLQSSVEEFKKKEMVHKSKVKEIGRLEKKGQDS 60
           ++EE  E++       DQAL SESQIQ LQSSVEE+K+K M H+SKVK+ G    +G  S
Sbjct: 166 VREEMEELQVSREFWKDQALESESQIQSLQSSVEEWKEKAMAHESKVKKKG----QGSVS 225

Query: 61  PLDEMEKQVLICQV-NKKNRNLLLHARDVRNRWRE 88
           P DEMEK VLIC+V  KKN NL+LHARDVR+R RE
Sbjct: 226 PPDEMEKHVLICRVKEKKNHNLVLHARDVRSRRRE 256

[Close]

BLAST of CmUC05G095950 vs. NCBI nr
Match: XP_008449702.1 (PREDICTED: centrosomal protein of 83 kDa isoform X2 [Cucumis melo])

HSP 1 Score: 86.7 bits (213), Expect = 1.2e-13
Identity = 57/95 (60.00%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 1   MKEEAAEIE-------DQALASESQIQYLQSSVEEFKKKEMVHKSKVKEIGRLEKKGQDS 60
           ++EE  E++       DQAL SESQIQ LQSSVEE+K+K M H+SKVK+ G    +G  S
Sbjct: 409 VREEMEELQVSREFWKDQALESESQIQSLQSSVEEWKEKAMAHESKVKKKG----QGSVS 468

Query: 61  PLDEMEKQVLICQV-NKKNRNLLLHARDVRNRWRE 88
           P DEMEK VLIC+V  KKN NL+LHARDVR+R RE
Sbjct: 469 PPDEMEKHVLICRVKEKKNHNLVLHARDVRSRRRE 499

[Close]

BLAST of CmUC05G095950 vs. NCBI nr
Match: XP_023512178.1 (calponin homology domain-containing protein DDB_G0272472 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 86.7 bits (213), Expect = 1.2e-13
Identity = 58/101 (57.43%), Postives = 71/101 (70.30%), Query Frame = 0


Query: 1   MKEEAAEIE-------DQALASESQIQYLQSSVEEFKKKEMVHKSKVKEIGRLEKKGQD- 60
           ++EE  E++       DQAL SESQI+ LQSSVEE+K K + H+SK KE+ R +KKGQ  
Sbjct: 349 VREEMEELQVSREFWKDQALESESQIRSLQSSVEEWKHKAIAHESKAKEVERSKKKGQGH 408

Query: 61  ---SPLDEMEKQVLICQVNKKNRNLLLHARDVRNRWREKYI 91
              SP DEMEK VLIC+V +KN N LLHARDVR+R RE  I
Sbjct: 409 GQASPPDEMEKHVLICRVKEKNPN-LLHARDVRSRRREMSI 448

[Close]

BLAST of CmUC05G095950 vs. NCBI nr
Match: XP_008449701.1 (PREDICTED: centrosomal protein of 83 kDa isoform X1 [Cucumis melo])

HSP 1 Score: 86.7 bits (213), Expect = 1.2e-13
Identity = 57/95 (60.00%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 1   MKEEAAEIE-------DQALASESQIQYLQSSVEEFKKKEMVHKSKVKEIGRLEKKGQDS 60
           ++EE  E++       DQAL SESQIQ LQSSVEE+K+K M H+SKVK+ G    +G  S
Sbjct: 412 VREEMEELQVSREFWKDQALESESQIQSLQSSVEEWKEKAMAHESKVKKKG----QGSVS 471

Query: 61  PLDEMEKQVLICQV-NKKNRNLLLHARDVRNRWRE 88
           P DEMEK VLIC+V  KKN NL+LHARDVR+R RE
Sbjct: 472 PPDEMEKHVLICRVKEKKNHNLVLHARDVRSRRRE 502

[Close]

BLAST of CmUC05G095950 vs. ExPASy TrEMBL
Match: A0A5A7TDB6 (Centrosomal protein of 83 kDa isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00690 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.8e-14
Identity = 57/95 (60.00%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 1   MKEEAAEIE-------DQALASESQIQYLQSSVEEFKKKEMVHKSKVKEIGRLEKKGQDS 60
           ++EE  E++       DQAL SESQIQ LQSSVEE+K+K M H+SKVK+ G    +G  S
Sbjct: 319 VREEMEELQVSREFWKDQALESESQIQSLQSSVEEWKEKAMAHESKVKKKG----QGSVS 378

Query: 61  PLDEMEKQVLICQV-NKKNRNLLLHARDVRNRWRE 88
           P DEMEK VLIC+V  KKN NL+LHARDVR+R RE
Sbjct: 379 PPDEMEKHVLICRVKEKKNHNLVLHARDVRSRRRE 409

[Close]

BLAST of CmUC05G095950 vs. ExPASy TrEMBL
Match: A0A1S3BMM7 (centrosomal protein of 83 kDa isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491502 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.8e-14
Identity = 57/95 (60.00%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 1   MKEEAAEIE-------DQALASESQIQYLQSSVEEFKKKEMVHKSKVKEIGRLEKKGQDS 60
           ++EE  E++       DQAL SESQIQ LQSSVEE+K+K M H+SKVK+ G    +G  S
Sbjct: 409 VREEMEELQVSREFWKDQALESESQIQSLQSSVEEWKEKAMAHESKVKKKG----QGSVS 468

Query: 61  PLDEMEKQVLICQV-NKKNRNLLLHARDVRNRWRE 88
           P DEMEK VLIC+V  KKN NL+LHARDVR+R RE
Sbjct: 469 PPDEMEKHVLICRVKEKKNHNLVLHARDVRSRRRE 499

[Close]

BLAST of CmUC05G095950 vs. ExPASy TrEMBL
Match: A0A1S4DXN9 (uncharacterized protein LOC103491502 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103491502 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.8e-14
Identity = 57/95 (60.00%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 1   MKEEAAEIE-------DQALASESQIQYLQSSVEEFKKKEMVHKSKVKEIGRLEKKGQDS 60
           ++EE  E++       DQAL SESQIQ LQSSVEE+K+K M H+SKVK+ G    +G  S
Sbjct: 166 VREEMEELQVSREFWKDQALESESQIQSLQSSVEEWKEKAMAHESKVKKKG----QGSVS 225

Query: 61  PLDEMEKQVLICQV-NKKNRNLLLHARDVRNRWRE 88
           P DEMEK VLIC+V  KKN NL+LHARDVR+R RE
Sbjct: 226 PPDEMEKHVLICRVKEKKNHNLVLHARDVRSRRRE 256

[Close]

BLAST of CmUC05G095950 vs. ExPASy TrEMBL
Match: A0A1S3BLZ7 (centrosomal protein of 83 kDa isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491502 PE=4 SV=1)

HSP 1 Score: 86.7 bits (213), Expect = 5.8e-14
Identity = 57/95 (60.00%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 1   MKEEAAEIE-------DQALASESQIQYLQSSVEEFKKKEMVHKSKVKEIGRLEKKGQDS 60
           ++EE  E++       DQAL SESQIQ LQSSVEE+K+K M H+SKVK+ G    +G  S
Sbjct: 412 VREEMEELQVSREFWKDQALESESQIQSLQSSVEEWKEKAMAHESKVKKKG----QGSVS 471

Query: 61  PLDEMEKQVLICQV-NKKNRNLLLHARDVRNRWRE 88
           P DEMEK VLIC+V  KKN NL+LHARDVR+R RE
Sbjct: 472 PPDEMEKHVLICRVKEKKNHNLVLHARDVRSRRRE 502

[Close]

BLAST of CmUC05G095950 vs. ExPASy TrEMBL
Match: A0A6J1JI67 (calponin homology domain-containing protein DDB_G0272472 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111484579 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 1.3e-13
Identity = 57/99 (57.58%), Postives = 70/99 (70.71%), Query Frame = 0


Query: 1   MKEEAAEIE-------DQALASESQIQYLQSSVEEFKKKEMVHKSKVKEIGRLEKKGQD- 60
           ++EE  E++       DQAL SESQI+ LQSSVEE+K K + H+SK KE+ R +KKGQ  
Sbjct: 349 VREEMEELQVSREFWKDQALESESQIRSLQSSVEEWKHKVIAHESKTKEVERSKKKGQGR 408

Query: 61  ----SPLDEMEKQVLICQVNKKNRNLLLHARDVRNRWRE 88
               SP DEMEK VLIC+V +KN N LLHARDVR+R RE
Sbjct: 409 HGQASPPDEMEKHVLICRVKEKNPN-LLHARDVRSRRRE 446

The following BLAST results are available for this feature:

BLAST of CmUC05G095950 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900838.1	1.8e-14	60.64	golgin subfamily A member 6-like protein 7 [Benincasa hispida]	[more]
XP_016900742.1	1.2e-13	60.00	PREDICTED: uncharacterized protein LOC103491502 isoform X3 [Cucumis melo]	[more]
XP_008449702.1	1.2e-13	60.00	PREDICTED: centrosomal protein of 83 kDa isoform X2 [Cucumis melo]	[more]
XP_023512178.1	1.2e-13	57.43	calponin homology domain-containing protein DDB_G0272472 isoform X3 [Cucurbita p...	[more]
XP_008449701.1	1.2e-13	60.00	PREDICTED: centrosomal protein of 83 kDa isoform X1 [Cucumis melo]	[more]

BLAST of CmUC05G095950 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC05G095950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TDB6	5.8e-14	60.00	Centrosomal protein of 83 kDa isoform X1 OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3BMM7	5.8e-14	60.00	centrosomal protein of 83 kDa isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491502...	[more]
A0A1S4DXN9	5.8e-14	60.00	uncharacterized protein LOC103491502 isoform X3 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BLZ7	5.8e-14	60.00	centrosomal protein of 83 kDa isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491502...	[more]
A0A6J1JI67	1.3e-13	57.58	calponin homology domain-containing protein DDB_G0272472 isoform X1 OS=Cucurbita...	[more]

BLAST of CmUC05G095950 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC05G095950.1	CmUC05G095950.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane