
CmUC05G095510 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGACAAATGTTAATGGTCGATGGGAACGATGAAATAGGCCAGAGTCATGAATAGAGAGGGTAATCGATGGTGGTAGCAACGACTATGAAAGTAGGAGATGAGAGTTGCGGTGTGAGGGGCGGCAGTAGCAACAGTGGTAGTTACTAAACACGGTAGGAGGTTGCAATGGCAGACGAAGTTCATTGGTAGTATCTATGATGGAAAGGAACAGAGTAATAATATAGAGGTATTTTAGTCATTTTCATATATTATCACACACATACGAGATGCAGCTTCATACGTCGCCGTTTTTGCTAGTTAAGATATTTTTCAAGTTTTGTTCGACAATTGACTAATGAGTAGTATATGGTTGAAGAAGGCTCGAAGCAGAACCAAGCCACAAAATGCTGATGTTCGGCAAATTCATCTCAAAGGACGTTTGAAATTCCAAGATCAAACTGTTTTCTAATTGGAAAATGATGCAGATTCTTCTCAATTCATCACCCCCATTTCTTCTCCAATGCTGTTCTTCTCCTCCTTCTACTTCCTCCAGGTATCATCATTCTTTCTCCAATTATCTTTACGTTTCCTTCTGTTGTTTTAATTCTACTTCTATTTTTTCTGGGTTCCTTTCAATTTGTAATTAAACTCGCGATTCTTGCTGTAATTTTCGGATATTTGCGTTGGCATTAGGAAATTTCGTAACTAGGTTGTGGGTTGTTGGACTGTTTATCCAAAATGGGAGCGATGGGTTTGATTCAATAATCTCTTCTTAGGTTTTGAAAATGGTGAAATGAATTAGCATTTGGAACTGAGGTTGCATTCAATTGGGTGACCGAATTCATGGATTGAAAGTGGTTGAGTACTTGAGTTTGATGTGCAATTGATATCAGTGGTTGAATTGGACACATGATGTTGGAAGTAGTAATTGATATAAAGAACAACTATTTGTGACAGTGATGAGATGACAAGACTTCAGCCCTCAATGTATAATGCTTCCTTGTTTATGTTTATTTCTATTCTCTCACAACTGTTAGATGACAAGACTTCAGCCTTCAATGTATAATGCTTCCTTGTTTATGTTTATTTCTATTCTCTCACAACTGTTGGTTCAAACAAATTGATGCTCCATTTTATCAGCCATTGACATTTTTCTGATTACTTTTTTTAATGATTTTTTTTCTTTTTTCTAATCAGGGGAATGCCTGGGAAAGTAATGTTGAAGAATGGTTTTGAGCAACCTGCTCTAAGAAAGCTTGTGTCCCAGCATGTAGTCCCTGGATTTGCTGCTTCATTGATATTTCTCACTCAAACAAACCAGGTTCGTGGGTCTGTTGACTACTGCAAGCTAGCTAATGTAACAACTTTTGTAAAGATAGCTAAGTAGTCAACTTCAAGTGGTTTCTGGTCCATTTTTAAATTCATTTGGTGTGCATTTAACTTGCATATTGGCACCAGAATGCCAGCAGTTCAGATGCCAATGACAAGCTTGGATCCCAATATTCAATCCTGTTGATTCAAATTGAAACTATGCATCCTTTATTTGCAACAATAGGTTCAAATGCTTGGAGACGCATACAATATGTTTGGTGTCATTCAATTAGCTCTCTGTTCATAATGTTTCCATGAATGAATATAGAGTTTCAACCCAAGATCCAATGGCATATAGGATTTGACTCGTGTCGTAGGAGGACATATACAGGATAAACTAGTTAGAAACAAAGCTTCCTGTCTCTTACACTAGTTTCTTGATCAGGCTATCTCCGTAGATATACCTCGCCATGACAACTTGTGTCAGCTTGCCAGTGTAGAGAATGCTGCAAGCCTTCCTTTTGACAATGATTCTGATGGAGGGGGGAGGTTGATGATGATGAGAGGGATGACAACCAAAAATTTTGATCCTGTTCGATATTCAGGAAGATGGTTTGAAGTTGCTTCGCTTAAACGTGGATTTGCAGGTCAAGGTCAGGAAGACTGCCACTGCACCCAGGTGAACGTGACTGATTGCCGGTTGGTGTAGCTTATAGTTTCTTTTGTTGTCTCTTGGAATCTGAACAATTACTCCTTTAATCGTATTATATATTTCAACACAACCACCGACGGGTCTTACATGCCTTTTGTATCATAGAGCAAAAAAGTGGCATAGGTGAACTTAATCATTTACTCTAATGGTGTTAATAGAATCATTTGCAGTCCAACATCCATATGATTCACTGATCAATGTAGTAATTATACTGATGAATATATTTATACTGTATCAATATGTAGGGTGTATACACATTTGATATGGCGACACCAGCAATACAAGTAGATACCTTTTGTGTTCATGGAAGCCCCGATGGATATATAACTGGTATAAGAGGAAGAGTTCAGTGTCTTCCAGAGGAAGATTTACAGAAAAACGCAACCGAGTTGGAGAAGCAGGAGATGATCAAGGAGAAATGTTACCTGCGTTTTCCTACACTGCCATTTATCCCTAAGGAGCCATATGATGTCATTGCAACTGATTATGACAACTTCGCTATTGTTTCTGGAGCTAAAGACCTTAGCTTTGTTCAGGTAAATTTAAAGATTCAGTGCATATCCTAGTTTGGTTTAAATATTATTTTCGTCCTAAGATGCTATGACTTGCAGTTTTAAAACCTTAGTTCCAACAGCTATCGGACTAATTACTAATAATTAGTCTAGTTTCCAAGCCATTTCCTAATTAAAAATGGTTTAAGCACTCCTATGGTTTGCAAAGGTTTTTTTATTTTTATTTTATTTTATTTTATTATTATGATTCTTTTATATTCTAATGTTAAATTCAATGGAAATAATACGTGTGGCTTATTCTGACCCAGAATGAAGTGGAGTGTGATTTGCAAACTATAAAGATGTTTAAAATGTTAAAATGCCATCTGACCCAGAATGAAGACTAGTTATGCAATTTATTCAGGGATAATATAGATATGTTGTTTACCTTTTTAGTAAGAGTTTTTTAGCTGTTCATCTCCATGTTTGAACCCCATTAGATTGGAATCTTAAAGCTTTGAACTTCAAGTGGATAAAGTGAACCCTTTTTTTCACTGTAATGATAGCTTTGCCGAACTTAGTTCTATTTATCAGTTTTGAAACATGATCTGTTTTGTTCTTATTTACGACAAACTACAGAGCAGCGACTAGTAATAACTTGGACACCATTGTCTGCAACTTTTCTGATTGATTCTTTTGAACATAACATCTAACAGATCTATTCAAGAACGCCAAACCCCGGACGTGACTTTATAGAGAAGTACAAATCGTACTTGGCAAACTTCGGGTATGATCCTAGCAAAATCAAGGACACTCCTCAAGATTGTGAAGTAATGTCAAATAGTCAGCTAGCTGCAATGATGTCAATGTCTGGAATGCAACAGGCTTTGACAAATCAGTTTCCGGATTTAGGGCTAAAGGCTCCTATTGAACTCAACCCCTTCACAAGTGTATTTGATACTTTCAAAAAGCTACTAGAGCTCTATTTCAAGTAGTAGTTCTGTGGTACTATATGTGTTGAGCATTCTGGTTTAAACCTCATTAATGCTTAATTTAATTGAGTCTCAAATATG TGACAAATGTTAATGGTCGATGGGAACGATGAAATAGGCCAGAGTCATGAATAGAGAGGGTAATCGATGGTGGTAGCAACGACTATGAAAGTAGGAGATGAGAGTTGCGGTGTGAGGGGCGGCAGTAGCAACAGTGGTAGTTACTAAACACGGTAGGAGGTTGCAATGGCAGACGAAGTTCATTGGTAGTATCTATGATGGAAAGGAACAGAGTAATAATATAGAGAAGGCTCGAAGCAGAACCAAGCCACAAAATGCTGATGTTCGGCAAATTCATCTCAAAGGACGTTTGAAATTCCAAGATCAAACTGTTTTCTAATTGGAAAATGATGCAGATTCTTCTCAATTCATCACCCCCATTTCTTCTCCAATGCTGTTCTTCTCCTCCTTCTACTTCCTCCAGGGGAATGCCTGGGAAAGTAATGTTGAAGAATGGTTTTGAGCAACCTGCTCTAAGAAAGCTTGTGTCCCAGCATGTAGTCCCTGGATTTGCTGCTTCATTGATATTTCTCACTCAAACAAACCAGGCTATCTCCGTAGATATACCTCGCCATGACAACTTGTGTCAGCTTGCCAGTGTAGAGAATGCTGCAAGCCTTCCTTTTGACAATGATTCTGATGGAGGGGGGAGGTTGATGATGATGAGAGGGATGACAACCAAAAATTTTGATCCTGTTCGATATTCAGGAAGATGGTTTGAAGTTGCTTCGCTTAAACGTGGATTTGCAGGTCAAGGTCAGGAAGACTGCCACTGCACCCAGGGTGTATACACATTTGATATGGCGACACCAGCAATACAAGTAGATACCTTTTGTGTTCATGGAAGCCCCGATGGATATATAACTGGTATAAGAGGAAGAGTTCAGTGTCTTCCAGAGGAAGATTTACAGAAAAACGCAACCGAGTTGGAGAAGCAGGAGATGATCAAGGAGAAATGTTACCTGCGTTTTCCTACACTGCCATTTATCCCTAAGGAGCCATATGATGTCATTGCAACTGATTATGACAACTTCGCTATTGTTTCTGGAGCTAAAGACCTTAGCTTTGTTCAGATCTATTCAAGAACGCCAAACCCCGGACGTGACTTTATAGAGAAGTACAAATCGTACTTGGCAAACTTCGGGTATGATCCTAGCAAAATCAAGGACACTCCTCAAGATTGTGAAGTAATGTCAAATAGTCAGCTAGCTGCAATGATGTCAATGTCTGGAATGCAACAGGCTTTGACAAATCAGTTTCCGGATTTAGGGCTAAAGGCTCCTATTGAACTCAACCCCTTCACAAGTGTATTTGATACTTTCAAAAAGCTACTAGAGCTCTATTTCAAGTAGTAGTTCTGTGGTACTATATGTGTTGAGCATTCTGGTTTAAACCTCATTAATGCTTAATTTAATTGAGTCTCAAATATG ATGATGCAGATTCTTCTCAATTCATCACCCCCATTTCTTCTCCAATGCTGTTCTTCTCCTCCTTCTACTTCCTCCAGGGGAATGCCTGGGAAAGTAATGTTGAAGAATGGTTTTGAGCAACCTGCTCTAAGAAAGCTTGTGTCCCAGCATGTAGTCCCTGGATTTGCTGCTTCATTGATATTTCTCACTCAAACAAACCAGGCTATCTCCGTAGATATACCTCGCCATGACAACTTGTGTCAGCTTGCCAGTGTAGAGAATGCTGCAAGCCTTCCTTTTGACAATGATTCTGATGGAGGGGGGAGGTTGATGATGATGAGAGGGATGACAACCAAAAATTTTGATCCTGTTCGATATTCAGGAAGATGGTTTGAAGTTGCTTCGCTTAAACGTGGATTTGCAGGTCAAGGTCAGGAAGACTGCCACTGCACCCAGGGTGTATACACATTTGATATGGCGACACCAGCAATACAAGTAGATACCTTTTGTGTTCATGGAAGCCCCGATGGATATATAACTGGTATAAGAGGAAGAGTTCAGTGTCTTCCAGAGGAAGATTTACAGAAAAACGCAACCGAGTTGGAGAAGCAGGAGATGATCAAGGAGAAATGTTACCTGCGTTTTCCTACACTGCCATTTATCCCTAAGGAGCCATATGATGTCATTGCAACTGATTATGACAACTTCGCTATTGTTTCTGGAGCTAAAGACCTTAGCTTTGTTCAGATCTATTCAAGAACGCCAAACCCCGGACGTGACTTTATAGAGAAGTACAAATCGTACTTGGCAAACTTCGGGTATGATCCTAGCAAAATCAAGGACACTCCTCAAGATTGTGAAGTAATGTCAAATAGTCAGCTAGCTGCAATGATGTCAATGTCTGGAATGCAACAGGCTTTGACAAATCAGTTTCCGGATTTAGGGCTAAAGGCTCCTATTGAACTCAACCCCTTCACAAGTGTATTTGATACTTTCAAAAAGCTACTAGAGCTCTATTTCAAGTAG MMQILLNSSPPFLLQCCSSPPSTSSRGMPGKVMLKNGFEQPALRKLVSQHVVPGFAASLIFLTQTNQAISVDIPRHDNLCQLASVENAASLPFDNDSDGGGRLMMMRGMTTKNFDPVRYSGRWFEVASLKRGFAGQGQEDCHCTQGVYTFDMATPAIQVDTFCVHGSPDGYITGIRGRVQCLPEEDLQKNATELEKQEMIKEKCYLRFPTLPFIPKEPYDVIATDYDNFAIVSGAKDLSFVQIYSRTPNPGRDFIEKYKSYLANFGYDPSKIKDTPQDCEVMSNSQLAAMMSMSGMQQALTNQFPDLGLKAPIELNPFTSVFDTFKKLLELYFK Homology
BLAST of CmUC05G095510 vs. NCBI nr
Match: XP_038896860.1 (chloroplastic lipocalin [Benincasa hispida]) HSP 1 Score: 652.5 bits (1682), Expect = 1.9e-183 Identity = 321/334 (96.11%), Postives = 325/334 (97.31%), Query Frame = 0
BLAST of CmUC05G095510 vs. NCBI nr
Match: XP_022139350.1 (chloroplastic lipocalin [Momordica charantia]) HSP 1 Score: 632.9 bits (1631), Expect = 1.6e-177 Identity = 308/334 (92.22%), Postives = 321/334 (96.11%), Query Frame = 0
BLAST of CmUC05G095510 vs. NCBI nr
Match: XP_008454519.1 (PREDICTED: chloroplastic lipocalin [Cucumis melo]) HSP 1 Score: 628.6 bits (1620), Expect = 3.0e-176 Identity = 311/334 (93.11%), Postives = 316/334 (94.61%), Query Frame = 0
BLAST of CmUC05G095510 vs. NCBI nr
Match: XP_004151949.1 (chloroplastic lipocalin isoform X1 [Cucumis sativus] >KGN57997.1 hypothetical protein Csa_009750 [Cucumis sativus]) HSP 1 Score: 620.5 bits (1599), Expect = 8.2e-174 Identity = 306/326 (93.87%), Postives = 310/326 (95.09%), Query Frame = 0
BLAST of CmUC05G095510 vs. NCBI nr
Match: XP_023523863.1 (chloroplastic lipocalin [Cucurbita pepo subsp. pepo]) HSP 1 Score: 609.0 bits (1569), Expect = 2.5e-170 Identity = 299/334 (89.52%), Postives = 311/334 (93.11%), Query Frame = 0
BLAST of CmUC05G095510 vs. ExPASy Swiss-Prot
Match: Q9STS7 (Chloroplastic lipocalin OS=Arabidopsis thaliana OX=3702 GN=CHL PE=1 SV=1) HSP 1 Score: 434.5 bits (1116), Expect = 1.1e-120 Identity = 220/324 (67.90%), Postives = 258/324 (79.63%), Query Frame = 0
BLAST of CmUC05G095510 vs. ExPASy Swiss-Prot
Match: P51910 (Apolipoprotein D OS=Mus musculus OX=10090 GN=Apod PE=1 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 7.8e-10 Identity = 49/172 (28.49%), Postives = 71/172 (41.28%), Query Frame = 0
BLAST of CmUC05G095510 vs. ExPASy Swiss-Prot
Match: P05090 (Apolipoprotein D OS=Homo sapiens OX=9606 GN=APOD PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.8e-07 Identity = 51/179 (28.49%), Postives = 79/179 (44.13%), Query Frame = 0
BLAST of CmUC05G095510 vs. ExPASy Swiss-Prot
Match: Q8SPI0 (Apolipoprotein D OS=Macaca fascicularis OX=9541 GN=APOD PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 2.0e-05 Identity = 44/177 (24.86%), Postives = 71/177 (40.11%), Query Frame = 0
BLAST of CmUC05G095510 vs. ExPASy Swiss-Prot
Match: P23593 (Apolipoprotein D OS=Rattus norvegicus OX=10116 GN=Apod PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 2.0e-05 Identity = 44/172 (25.58%), Postives = 67/172 (38.95%), Query Frame = 0
BLAST of CmUC05G095510 vs. ExPASy TrEMBL
Match: A0A6J1CC31 (chloroplastic lipocalin OS=Momordica charantia OX=3673 GN=LOC111010299 PE=3 SV=1) HSP 1 Score: 632.9 bits (1631), Expect = 7.7e-178 Identity = 308/334 (92.22%), Postives = 321/334 (96.11%), Query Frame = 0
BLAST of CmUC05G095510 vs. ExPASy TrEMBL
Match: A0A1S3BYS9 (chloroplastic lipocalin OS=Cucumis melo OX=3656 GN=LOC103494915 PE=3 SV=1) HSP 1 Score: 628.6 bits (1620), Expect = 1.5e-176 Identity = 311/334 (93.11%), Postives = 316/334 (94.61%), Query Frame = 0
BLAST of CmUC05G095510 vs. ExPASy TrEMBL
Match: A0A0A0LBK6 (Lipocln_cytosolic_FA-bd_dom domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G426340 PE=3 SV=1) HSP 1 Score: 620.5 bits (1599), Expect = 4.0e-174 Identity = 306/326 (93.87%), Postives = 310/326 (95.09%), Query Frame = 0
BLAST of CmUC05G095510 vs. ExPASy TrEMBL
Match: A0A5D3BW66 (Chloroplastic lipocalin OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold566G00030 PE=3 SV=1) HSP 1 Score: 608.2 bits (1567), Expect = 2.0e-170 Identity = 296/307 (96.42%), Postives = 300/307 (97.72%), Query Frame = 0
BLAST of CmUC05G095510 vs. ExPASy TrEMBL
Match: A0A6J1IZS8 (chloroplastic lipocalin OS=Cucurbita maxima OX=3661 GN=LOC111480629 PE=3 SV=1) HSP 1 Score: 606.3 bits (1562), Expect = 7.7e-170 Identity = 299/334 (89.52%), Postives = 310/334 (92.81%), Query Frame = 0
BLAST of CmUC05G095510 vs. TAIR 10
Match: AT3G47860.1 (chloroplastic lipocalin ) HSP 1 Score: 434.5 bits (1116), Expect = 7.8e-122 Identity = 220/324 (67.90%), Postives = 258/324 (79.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|