CmUC05G093130 (gene) Watermelon (USVL531) v1

Overview
NameCmUC05G093130
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr05: 13493152 .. 13494379 (-)
RNA-Seq ExpressionCmUC05G093130
SyntenyCmUC05G093130
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAGTCGCTATCAAATCACACGCACACATTGATACGCAGTCAATCTATTATGCTCACAATCCAGGTCAATCTTTGGTTGTCGATCCAGTTCGTGCCCATGACTTGCATCGTCTGTACTACGTTGCTGCCAATCCATCGCAGTTTTACCTTATGTCCATAGTGTCGTCGCCAATCTGCTTGGTTCTGTGCAGACACCCCCATTCCAAGCCCTCTACAACACCCGATAATTCTGTTTTGGGAGTTCGTGGTCTACAGTTTTGTGGGTATCTTGATTCTTACTTTTTGCTCAGTGTCTATTGTCTACTGTGTGGAGTTTATTCTTGTATTTGATAGTCAAATGACTTACTCCAAGCATCTATTTCACCCGGTTCTTGCGGTGTCCAATATTAAGAATCATATTTCCATTGTTCTAGAGATGGAGAATGTTCAATATGTGATATGGGCAGAGTTGTTTAAGATTCACGCACGCTCCCATAAATTTATTCACCCCATTATTCCTCCCGCCAAGGTAAAAAAAAAAAAAAAAAAGTGCCCAAATTGATGAGGAAAATGAACTTTGGCTGACTCTAGATGCTACCATACTTCAATGGATTTATGCAATGATCTCCCATGATTTGTTGCACACTATTCTGGAACTCGATGCTACAACCCATGGAGGCCTAGAATAGATTGTGTGATATATTCCAAGATAACGAAAACTCTCAAGCAGCTTCTCTGGAACAAGAGTTTTCTCACACCAACATGGAGGATTTTGTGAATGCCTCATCATTTTGCTAGCGACTCGAGTTTTTTAGATTAGCTTAAGAACGTTAGACCTGACTTGTGTTGCAAATGGTTGCCAGCCTAATTGAGGCCTACGGTGGAGTTACTACACTTATTCAACAAAGTGATCCTCTCCCTAAGTTTTATCAGGCATGGTTTATGATAATTCGTGAAGAAGTAGGTTTTGTGAAGTAAGCGACCACCAGAATTGCATCTTATGTTGCCATGGTTACTTGTGAGTCCGTGGAGATCCTGTCTCTCACTACCAACTATCCTTCCACTCATGGACAGAATACTGGGAAAAATGGTGGAAAAAATTGCAGTAAGGGAGGACAGTCTCGTGGTACTGGTCGACAAATGTGGTACTAGTGGTAGTCATGGTAGTCAATCTTGTTGTAGTAGAAGCAGTCAACTCGCAGGGAATCAACAACATTCTAAGTGGATAGCACCCCATCAAGCATAG

mRNA sequence

ATGGGAGTCGCTATCAAATCACACGCACACATTGATACGCAGTCAATCTATTATGCTCACAATCCAGGTCAATCTTTGGTTGTCGATCCAGTTCGTGCCCATGACTTGCATCGTCTGTACTACGTTGCTGCCAATCCATCGCAGTTTTACCTTATGTCCATAGTGTCGTCGCCAATCTGCTTGGTTCTGTGCAGACACCCCCATTCCAAGCCCTCTACAACACCCGATAATTCTGTTTTGGGAGTTCGTGGTCTACAGTTTTGTGGCCTAATTGAGGCCTACGGTGGAGTTACTACACTTATTCAACAAAGTGATCCTCTCCCTAAGTTTTATCAGGCATGGTTTATGATAATTCGTGAAGAAGTAGGTTTTGTGAAAATACTGGGAAAAATGGTGGAAAAAATTGCAGTAAGGGAGGACAGTCTCGTGGTACTGGTCGACAAATGTGGTACTAGTGGTAGTCATGGTAGTCAATCTTGTTGTAGTAGAAGCAGTCAACTCGCAGGGAATCAACAACATTCTAAGTGGATAGCACCCCATCAAGCATAG

Coding sequence (CDS)

ATGGGAGTCGCTATCAAATCACACGCACACATTGATACGCAGTCAATCTATTATGCTCACAATCCAGGTCAATCTTTGGTTGTCGATCCAGTTCGTGCCCATGACTTGCATCGTCTGTACTACGTTGCTGCCAATCCATCGCAGTTTTACCTTATGTCCATAGTGTCGTCGCCAATCTGCTTGGTTCTGTGCAGACACCCCCATTCCAAGCCCTCTACAACACCCGATAATTCTGTTTTGGGAGTTCGTGGTCTACAGTTTTGTGGCCTAATTGAGGCCTACGGTGGAGTTACTACACTTATTCAACAAAGTGATCCTCTCCCTAAGTTTTATCAGGCATGGTTTATGATAATTCGTGAAGAAGTAGGTTTTGTGAAAATACTGGGAAAAATGGTGGAAAAAATTGCAGTAAGGGAGGACAGTCTCGTGGTACTGGTCGACAAATGTGGTACTAGTGGTAGTCATGGTAGTCAATCTTGTTGTAGTAGAAGCAGTCAACTCGCAGGGAATCAACAACATTCTAAGTGGATAGCACCCCATCAAGCATAG

Protein sequence

MGVAIKSHAHIDTQSIYYAHNPGQSLVVDPVRAHDLHRLYYVAANPSQFYLMSIVSSPICLVLCRHPHSKPSTTPDNSVLGVRGLQFCGLIEAYGGVTTLIQQSDPLPKFYQAWFMIIREEVGFVKILGKMVEKIAVREDSLVVLVDKCGTSGSHGSQSCCSRSSQLAGNQQHSKWIAPHQA
Homology
[Close]
BLAST of CmUC05G093130 vs. NCBI nr
Match: XP_006606884.1 (uncharacterized protein LOC102662166 [Glycine max])

HSP 1 Score: 57.0 bits (136), Expect = 2.0e-04
Identity = 27/38 (71.05%), Postives = 28/38 (73.68%), Query Frame = 0 

Query: 89  GLIEAYGGVTTLIQQSDPLPKFYQAWFMIIREEVGFVK 127
           GL E Y GV TLI QSDPLP FYQA FM+  EEVGF K
Sbjct: 70  GLTETYNGVATLIFQSDPLPPFYQACFMLTLEEVGFTK 107

[Close]
BLAST of CmUC05G093130 vs. NCBI nr
Match: KYP39515.1 (hypothetical protein KK1_039169, partial [Cajanus cajan])

HSP 1 Score: 55.1 bits (131), Expect = 7.5e-04
Identity = 27/53 (50.94%), Postives = 33/53 (62.26%), Query Frame = 0 

Query: 89  GLIEAYGGVTTLIQQSDPLPKFYQAWFMIIREEVGFVKILGKMVEKIAVREDS 142
           GLIE Y GV TLI+QSDPLP+FYQA  M+  EE G  K + +      +  DS
Sbjct: 91  GLIEPYNGVATLIRQSDPLPQFYQARSMLTLEEAGLAKKVAQNSSSAMIARDS 143

[Close]
BLAST of CmUC05G093130 vs. NCBI nr
Match: XP_024638362.1 (uncharacterized protein LOC112421315 [Medicago truncatula])

HSP 1 Score: 55.1 bits (131), Expect = 7.5e-04
Identity = 26/38 (68.42%), Postives = 30/38 (78.95%), Query Frame = 0 

Query: 89  GLIEAYGGVTTLIQQSDPLPKFYQAWFMIIREEVGFVK 127
           GL EAY GV TLI+QSDPLP+FYQA  M+  EEVG +K
Sbjct: 171 GLSEAYNGVATLIRQSDPLPQFYQARSMLTLEEVGLMK 208

[Close]
BLAST of CmUC05G093130 vs. ExPASy TrEMBL
Match: A0A151RAW4 (Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_039169 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 3.6e-04
Identity = 27/53 (50.94%), Postives = 33/53 (62.26%), Query Frame = 0 

Query: 89  GLIEAYGGVTTLIQQSDPLPKFYQAWFMIIREEVGFVKILGKMVEKIAVREDS 142
           GLIE Y GV TLI+QSDPLP+FYQA  M+  EE G  K + +      +  DS
Sbjct: 91  GLIEPYNGVATLIRQSDPLPQFYQARSMLTLEEAGLAKKVAQNSSSAMIARDS 143

The following BLAST results are available for this feature:
BLAST of CmUC05G093130 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_006606884.12.0e-0471.05uncharacterized protein LOC102662166 [Glycine max][more]
KYP39515.17.5e-0450.94hypothetical protein KK1_039169, partial [Cajanus cajan][more]
XP_024638362.17.5e-0468.42uncharacterized protein LOC112421315 [Medicago truncatula][more]
BLAST of CmUC05G093130 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CmUC05G093130 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A151RAW43.6e-0450.94Uncharacterized protein (Fragment) OS=Cajanus cajan OX=3821 GN=KK1_039169 PE=4 S... [more]
BLAST of CmUC05G093130 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC05G093130.1CmUC05G093130.1mRNA