CmUC05G087110 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC05G087110
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	translocator protein homolog
Location	CmU531Chr05: 5818696 .. 5819214 (+)
RNA-Seq Expression	CmUC05G087110
Synteny	CmUC05G087110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTCTTCCAATCCGCCATTCAAATCCAGACCAGAATCCAAATACACCAAGGCCAAGAGAGCGCTCCGATCACTCGCCGTCTCCGTCGCCATTCCCCTCTTCCTAACAATCGCCGTCATCTTCCTCTTCGGTCGCTCCGCTCGCCATTTCCCCAATCGGAACCGTCCCATTTGGATACCACCGCTCTGGTTTCTCCATCTCTCCTCCATTGGCTCCTCCTTTCTAATCGGCCTCGCCGCTTGGCTCGTTTGGGCGGACGGTGGTTTCCACGGCGGTTCCAACGCTCTTCCGCTCTACATCGCGCATCTTTCTCTTAGCGTCGTTTGGAATCCTCTGGTGCTCGTGATTCGCTCTGTCATGCTTGCGTTTCTGTTCTGCGTTTTGGATTTTGTTACTCTGTTTGCTTGTTATCGGACCTTCAAGCGAGTCAATCCCTTCGCTAAGGATCTGATTAAGCCTTGTTTGGCTTGGACTGCGTATCTCTCTGCTATTACTTATGTGTTCATTGATCTTTGA

mRNA sequence

ATGTCTTCTTCCAATCCGCCATTCAAATCCAGACCAGAATCCAAATACACCAAGGCCAAGAGAGCGCTCCGATCACTCGCCGTCTCCGTCGCCATTCCCCTCTTCCTAACAATCGCCGTCATCTTCCTCTTCGGTCGCTCCGCTCGCCATTTCCCCAATCGGAACCGTCCCATTTGGATACCACCGCTCTGGTTTCTCCATCTCTCCTCCATTGGCTCCTCCTTTCTAATCGGCCTCGCCGCTTGGCTCGTTTGGGCGGACGGTGGTTTCCACGGCGGTTCCAACGCTCTTCCGCTCTACATCGCGCATCTTTCTCTTAGCGTCGTTTGGAATCCTCTGGTGCTCGTGATTCGCTCTGTCATGCTTGCGTTTCTGTTCTGCGTTTTGGATTTTGTTACTCTGTTTGCTTGTTATCGGACCTTCAAGCGAGTCAATCCCTTCGCTAAGGATCTGATTAAGCCTTGTTTGGCTTGGACTGCGTATCTCTCTGCTATTACTTATGTGTTCATTGATCTTTGA

Coding sequence (CDS)

ATGTCTTCTTCCAATCCGCCATTCAAATCCAGACCAGAATCCAAATACACCAAGGCCAAGAGAGCGCTCCGATCACTCGCCGTCTCCGTCGCCATTCCCCTCTTCCTAACAATCGCCGTCATCTTCCTCTTCGGTCGCTCCGCTCGCCATTTCCCCAATCGGAACCGTCCCATTTGGATACCACCGCTCTGGTTTCTCCATCTCTCCTCCATTGGCTCCTCCTTTCTAATCGGCCTCGCCGCTTGGCTCGTTTGGGCGGACGGTGGTTTCCACGGCGGTTCCAACGCTCTTCCGCTCTACATCGCGCATCTTTCTCTTAGCGTCGTTTGGAATCCTCTGGTGCTCGTGATTCGCTCTGTCATGCTTGCGTTTCTGTTCTGCGTTTTGGATTTTGTTACTCTGTTTGCTTGTTATCGGACCTTCAAGCGAGTCAATCCCTTCGCTAAGGATCTGATTAAGCCTTGTTTGGCTTGGACTGCGTATCTCTCTGCTATTACTTATGTGTTCATTGATCTTTGA

Protein sequence

MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL

Homology

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BLAST of CmUC05G087110 vs. NCBI nr
Match: XP_038878873.1 (translocator protein homolog [Benincasa hispida])

HSP 1 Score: 332.4 bits (851), Expect = 2.3e-87
Identity = 167/172 (97.09%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWI 60
           MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPL LTIAVIFLFGRSARHFPNRNRPIWI
Sbjct: 1   MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLSLTIAVIFLFGRSARHFPNRNRPIWI 60

Query: 61  PPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV 120
            PLW LHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV
Sbjct: 61  GPLWLLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV 120

Query: 121 MLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL 173
           +LAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSA+TYVFIDL
Sbjct: 121 VLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAVTYVFIDL 172

[Close]

BLAST of CmUC05G087110 vs. NCBI nr
Match: XP_022973726.1 (translocator protein homolog [Cucurbita maxima] >XP_022975172.1 translocator protein homolog [Cucurbita maxima])

HSP 1 Score: 315.1 bits (806), Expect = 3.8e-82
Identity = 156/170 (91.76%), Postives = 164/170 (96.47%), Query Frame = 0


Query: 3   SSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPP 62
           SS+PPFKSRPESKYTKAKRALRSLAVSVAIPL LTIAVIFLFGRS+RHFPNRNRPIW+ P
Sbjct: 2   SSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAP 61

Query: 63  LWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSVML 122
           LW LHLSSI SSFLIGLAAWLVWADGGFH GSNALPLYIAHLSLSVVWNPLVLVIR+++L
Sbjct: 62  LWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIAHLSLSVVWNPLVLVIRALLL 121

Query: 123 AFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL 173
           AFLFCVLDFVTL+ACYRTFKRVNPFAKDLIKPCLAWTAYL A+TYVFIDL
Sbjct: 122 AFLFCVLDFVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL 171

[Close]

BLAST of CmUC05G087110 vs. NCBI nr
Match: XP_016898980.1 (PREDICTED: translocator protein homolog [Cucumis melo] >KAA0049494.1 translocator protein-like protein [Cucumis melo var. makuwa] >TYK16173.1 translocator protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 314.7 bits (805), Expect = 5.0e-82
Identity = 156/172 (90.70%), Postives = 165/172 (95.93%), Query Frame = 0


Query: 1   MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWI 60
           M SSNPPFKSRPESKYTKAKRALRSLAVSVAIP+ LTIAVIFLFGRS+RHFPNRNRPIWI
Sbjct: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWI 60

Query: 61  PPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV 120
            PLW L LSSIGSSFL+GLAAWLVWADGGFHGGSNALPLYIAHLSLSVVW+PLVLVIRSV
Sbjct: 61  GPLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSV 120

Query: 121 MLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL 173
           ++AFLFCVLDFVTLFACYR F+RVNPFAKDL+KPCLAWTAYLSA+TYVFI L
Sbjct: 121 VIAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 172

[Close]

BLAST of CmUC05G087110 vs. NCBI nr
Match: XP_023540366.1 (translocator protein homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 312.8 bits (800), Expect = 1.9e-81
Identity = 155/170 (91.18%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 3   SSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPP 62
           SS+PPFKSRPESKYTKAKRALRSLAVSVAIPL LTIAVIFLFGRS+RHFPNRNRPIW+ P
Sbjct: 57  SSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAP 116

Query: 63  LWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSVML 122
           LW LHLSSI SSFLIGLAAWLVWADGGFH GSNALPLYIAHLSLSVVWNPLVLVIR+++L
Sbjct: 117 LWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIAHLSLSVVWNPLVLVIRALLL 176

Query: 123 AFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL 173
           AFLFCVLD VTL+ACYRTFKRVNPFAKDLIKPCLAWTAYL A+TYVFIDL
Sbjct: 177 AFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL 226

[Close]

BLAST of CmUC05G087110 vs. NCBI nr
Match: XP_004134488.1 (translocator protein homolog [Cucumis sativus])

HSP 1 Score: 311.6 bits (797), Expect = 4.2e-81
Identity = 154/172 (89.53%), Postives = 163/172 (94.77%), Query Frame = 0


Query: 1   MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWI 60
           M SSNPPFKSRPESKYTKAKRALRSLAVSVAIP+ LTIA IFLFGRS+RH+PNRNRPIWI
Sbjct: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAAIFLFGRSSRHYPNRNRPIWI 60

Query: 61  PPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV 120
            PLW + LSSIGSSFL+GLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV
Sbjct: 61  GPLWLIQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV 120

Query: 121 MLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL 173
           ++AFLFCVLD VTLFACY  FKRVNPFAKDL+KPCLAWTAYLSA+TYVFIDL
Sbjct: 121 VIAFLFCVLDCVTLFACYLAFKRVNPFAKDLMKPCLAWTAYLSAVTYVFIDL 172

[Close]

BLAST of CmUC05G087110 vs. ExPASy Swiss-Prot
Match: O82245 (Translocator protein homolog OS=Arabidopsis thaliana OX=3702 GN=TSPO PE=1 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 7.1e-31
Identity = 66/157 (42.04%), Postives = 94/157 (59.87%), Query Frame = 0


Query: 9   KSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHL 68
           K + + K   AKR L+SL V+VA P+ +T+   +  G S  +        WIPPLW LH 
Sbjct: 33  KGKRDQKRAMAKRGLKSLTVAVAAPVLVTLFATYFLGTSDGYGNRAKSSSWIPPLWLLHT 92

Query: 69  SSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSVMLAFLFCV 128
           + + SS L+GLAAWLVW DGGFH   NAL LY+A   L +VW+P+   + S +      +
Sbjct: 93  TCLASSGLMGLAAWLVWVDGGFHKKPNALYLYLAQFLLCLVWDPVTFRVGSGVAGLAVWL 152

Query: 129 LDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAI 166
                LF CY+ F  ++P A +L+KPCLAW A+++A+
Sbjct: 153 GQSAALFGCYKAFNEISPVAGNLVKPCLAWAAFVAAV 189

[Close]

BLAST of CmUC05G087110 vs. ExPASy Swiss-Prot
Match: E2RDM9 (Translocator protein 2 OS=Canis lupus familiaris OX=9615 GN=TSPO2 PE=1 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.7e-05
Identity = 46/145 (31.72%), Postives = 68/145 (46.90%), Query Frame = 0


Query: 27  AVSVAIPLFLTIAVIFLF-GRSARHFPNRNRPIWIPPLWFLHLSSIGSSFLIGLAAWLVW 86
           A+ VA+P    I V  L   R  R +    +P W PP   L    I   F++G A++LVW
Sbjct: 6   AIFVALPHLGPILVSLLTRHRMIRWYDIPKKPPWCPPHKVLLAGWITIYFVMGYASYLVW 65

Query: 87  AD-GGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSVM--LAFLFCVLDFVTLFACYRTFK 146
            D GG  G   ALPL +  + L+V W  L+    +    LA L  +L +  + +    + 
Sbjct: 66  KDLGGGFGRPLALPLGLYAVQLAVSWAVLIFFFAAHAHGLALLHMLLLYGLVVSTALIWH 125

Query: 147 RVNPFAKDLIKPCLAWTAYLSAITY 168
            +N  A  L+ P LAW    ++I Y
Sbjct: 126 PINKLAAVLLLPYLAWLTVTASIAY 150

[Close]

BLAST of CmUC05G087110 vs. ExPASy Swiss-Prot
Match: Q5TGU0 (Translocator protein 2 OS=Homo sapiens OX=9606 GN=TSPO2 PE=1 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 4.3e-04
Identity = 37/112 (33.04%), Postives = 55/112 (49.11%), Query Frame = 0


Query: 59  WIPPLWFLHLSSIGSSFLIGLAAWLVWAD-GGFHGGSNALPLYIAHLSLSVVWNPLVL-- 118
           W P    L L       ++G A++LVW D GG  G   ALPL +  + L++ W  LVL  
Sbjct: 39  WCPFYKVLLLVQTAIYSVVGYASYLVWKDLGGGLGWPLALPLGLYAVQLTISWTVLVLFF 98

Query: 119 VIRSVMLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITY 168
            + +  LA L  +L +  + +    +  +N  A  L+ P LAW    SA+TY
Sbjct: 99  TVHNPGLALLHLLLLYGLVVSTALIWHPINKLAALLLLPYLAWLTVTSALTY 150

[Close]

BLAST of CmUC05G087110 vs. ExPASy TrEMBL
Match: A0A6J1ICB9 (translocator protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111474208 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.8e-82
Identity = 156/170 (91.76%), Postives = 164/170 (96.47%), Query Frame = 0


Query: 3   SSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPP 62
           SS+PPFKSRPESKYTKAKRALRSLAVSVAIPL LTIAVIFLFGRS+RHFPNRNRPIW+ P
Sbjct: 2   SSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAP 61

Query: 63  LWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSVML 122
           LW LHLSSI SSFLIGLAAWLVWADGGFH GSNALPLYIAHLSLSVVWNPLVLVIR+++L
Sbjct: 62  LWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIAHLSLSVVWNPLVLVIRALLL 121

Query: 123 AFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL 173
           AFLFCVLDFVTL+ACYRTFKRVNPFAKDLIKPCLAWTAYL A+TYVFIDL
Sbjct: 122 AFLFCVLDFVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL 171

[Close]

BLAST of CmUC05G087110 vs. ExPASy TrEMBL
Match: A0A5D3CWC4 (Translocator protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001010 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.4e-82
Identity = 156/172 (90.70%), Postives = 165/172 (95.93%), Query Frame = 0


Query: 1   MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWI 60
           M SSNPPFKSRPESKYTKAKRALRSLAVSVAIP+ LTIAVIFLFGRS+RHFPNRNRPIWI
Sbjct: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWI 60

Query: 61  PPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV 120
            PLW L LSSIGSSFL+GLAAWLVWADGGFHGGSNALPLYIAHLSLSVVW+PLVLVIRSV
Sbjct: 61  GPLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSV 120

Query: 121 MLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL 173
           ++AFLFCVLDFVTLFACYR F+RVNPFAKDL+KPCLAWTAYLSA+TYVFI L
Sbjct: 121 VIAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 172

[Close]

BLAST of CmUC05G087110 vs. ExPASy TrEMBL
Match: A0A1S4DTF2 (translocator protein homolog OS=Cucumis melo OX=3656 GN=LOC107990392 PE=3 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.4e-82
Identity = 156/172 (90.70%), Postives = 165/172 (95.93%), Query Frame = 0


Query: 1   MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWI 60
           M SSNPPFKSRPESKYTKAKRALRSLAVSVAIP+ LTIAVIFLFGRS+RHFPNRNRPIWI
Sbjct: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAVIFLFGRSSRHFPNRNRPIWI 60

Query: 61  PPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV 120
            PLW L LSSIGSSFL+GLAAWLVWADGGFHGGSNALPLYIAHLSLSVVW+PLVLVIRSV
Sbjct: 61  GPLWLLQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWSPLVLVIRSV 120

Query: 121 MLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL 173
           ++AFLFCVLDFVTLFACYR F+RVNPFAKDL+KPCLAWTAYLSA+TYVFI L
Sbjct: 121 VIAFLFCVLDFVTLFACYRAFERVNPFAKDLMKPCLAWTAYLSAVTYVFIHL 172

[Close]

BLAST of CmUC05G087110 vs. ExPASy TrEMBL
Match: A0A0A0L583 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154290 PE=3 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 2.0e-81
Identity = 154/172 (89.53%), Postives = 163/172 (94.77%), Query Frame = 0


Query: 1   MSSSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWI 60
           M SSNPPFKSRPESKYTKAKRALRSLAVSVAIP+ LTIA IFLFGRS+RH+PNRNRPIWI
Sbjct: 1   MPSSNPPFKSRPESKYTKAKRALRSLAVSVAIPVSLTIAAIFLFGRSSRHYPNRNRPIWI 60

Query: 61  PPLWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV 120
            PLW + LSSIGSSFL+GLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV
Sbjct: 61  GPLWLIQLSSIGSSFLVGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSV 120

Query: 121 MLAFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL 173
           ++AFLFCVLD VTLFACY  FKRVNPFAKDL+KPCLAWTAYLSA+TYVFIDL
Sbjct: 121 VIAFLFCVLDCVTLFACYLAFKRVNPFAKDLMKPCLAWTAYLSAVTYVFIDL 172

[Close]

BLAST of CmUC05G087110 vs. ExPASy TrEMBL
Match: A0A6J1FZS9 (translocator protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111449384 PE=3 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 2.7e-81
Identity = 155/170 (91.18%), Postives = 162/170 (95.29%), Query Frame = 0


Query: 3   SSNPPFKSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPP 62
           SS+PPFKSRPESKYTKAKRALRSLAVSVAIPL LTIAVIFLFGRS+RHFPNRNRPIW+ P
Sbjct: 57  SSSPPFKSRPESKYTKAKRALRSLAVSVAIPLTLTIAVIFLFGRSSRHFPNRNRPIWVAP 116

Query: 63  LWFLHLSSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSVML 122
           LW LHLSSI SSFLIGLAAWLVWADGGFH GSNALPLYIAHLSLSVVWNPLVLVIR+ +L
Sbjct: 117 LWLLHLSSISSSFLIGLAAWLVWADGGFHCGSNALPLYIAHLSLSVVWNPLVLVIRARLL 176

Query: 123 AFLFCVLDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAITYVFIDL 173
           AFLFCVLD VTL+ACYRTFKRVNPFAKDLIKPCLAWTAYL A+TYVFIDL
Sbjct: 177 AFLFCVLDLVTLYACYRTFKRVNPFAKDLIKPCLAWTAYLCAVTYVFIDL 226

[Close]

BLAST of CmUC05G087110 vs. TAIR 10
Match: AT2G47770.1 (TSPO(outer membrane tryptophan-rich sensory protein)-related )

HSP 1 Score: 135.2 bits (339), Expect = 5.0e-32
Identity = 66/157 (42.04%), Postives = 94/157 (59.87%), Query Frame = 0


Query: 9   KSRPESKYTKAKRALRSLAVSVAIPLFLTIAVIFLFGRSARHFPNRNRPIWIPPLWFLHL 68
           K + + K   AKR L+SL V+VA P+ +T+   +  G S  +        WIPPLW LH 
Sbjct: 33  KGKRDQKRAMAKRGLKSLTVAVAAPVLVTLFATYFLGTSDGYGNRAKSSSWIPPLWLLHT 92

Query: 69  SSIGSSFLIGLAAWLVWADGGFHGGSNALPLYIAHLSLSVVWNPLVLVIRSVMLAFLFCV 128
           + + SS L+GLAAWLVW DGGFH   NAL LY+A   L +VW+P+   + S +      +
Sbjct: 93  TCLASSGLMGLAAWLVWVDGGFHKKPNALYLYLAQFLLCLVWDPVTFRVGSGVAGLAVWL 152

Query: 129 LDFVTLFACYRTFKRVNPFAKDLIKPCLAWTAYLSAI 166
                LF CY+ F  ++P A +L+KPCLAW A+++A+
Sbjct: 153 GQSAALFGCYKAFNEISPVAGNLVKPCLAWAAFVAAV 189

The following BLAST results are available for this feature:

BLAST of CmUC05G087110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038878873.1	2.3e-87	97.09	translocator protein homolog [Benincasa hispida]	[more]
XP_022973726.1	3.8e-82	91.76	translocator protein homolog [Cucurbita maxima] >XP_022975172.1 translocator pro...	[more]
XP_016898980.1	5.0e-82	90.70	PREDICTED: translocator protein homolog [Cucumis melo] >KAA0049494.1 translocato...	[more]
XP_023540366.1	1.9e-81	91.18	translocator protein homolog [Cucurbita pepo subsp. pepo]	[more]
XP_004134488.1	4.2e-81	89.53	translocator protein homolog [Cucumis sativus]	[more]

BLAST of CmUC05G087110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82245	7.1e-31	42.04	Translocator protein homolog OS=Arabidopsis thaliana OX=3702 GN=TSPO PE=1 SV=1	[more]
E2RDM9	1.7e-05	31.72	Translocator protein 2 OS=Canis lupus familiaris OX=9615 GN=TSPO2 PE=1 SV=1	[more]
Q5TGU0	4.3e-04	33.04	Translocator protein 2 OS=Homo sapiens OX=9606 GN=TSPO2 PE=1 SV=1	[more]

BLAST of CmUC05G087110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ICB9	1.8e-82	91.76	translocator protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111474208 PE=3 SV...	[more]
A0A5D3CWC4	2.4e-82	90.70	Translocator protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A1S4DTF2	2.4e-82	90.70	translocator protein homolog OS=Cucumis melo OX=3656 GN=LOC107990392 PE=3 SV=1	[more]
A0A0A0L583	2.0e-81	89.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G154290 PE=3 SV=1	[more]
A0A6J1FZS9	2.7e-81	91.18	translocator protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111449384 PE=3 ...	[more]

BLAST of CmUC05G087110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47770.1	5.0e-32	42.04	TSPO(outer membrane tryptophan-rich sensory protein)-related	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004307	TspO/MBR-related protein	PIRSF	PIRSF005859	PBR	coord: 15..172 e-value: 5.2E-31 score: 104.5
IPR004307	TspO/MBR-related protein	PFAM	PF03073	TspO_MBR	coord: 29..168 e-value: 8.2E-21 score: 74.5
IPR004307	TspO/MBR-related protein	PANTHER	PTHR10057	PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR	coord: 4..171
IPR004307	TspO/MBR-related protein	CDD	cd15904	TSPO_MBR	coord: 26..170 e-value: 6.80245E-25 score: 91.7896
IPR038330	TspO/MBR-related superfamily	GENE3D	1.20.1260.100	TspO/MBR protein	coord: 20..172 e-value: 4.8E-22 score: 80.2
None	No IPR available	PANTHER	PTHR10057:SF6	TSPO/MBR FAMILY PROTEIN	coord: 4..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC05G087110.1	CmUC05G087110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0018216	peptidyl-arginine methylation
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008168	methyltransferase activity