CmUC05G083860 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCTCTCGTTCCTTCCTTACTGCGACCGGAACCGCCGTATCCGCTTCTTCTCACTCATCTTTCTCCCTTCTGCGCCGCCTCCGTCCCCTCACTGCTATAGTCGCCGCTGATTTCCGGTCTCTCTCTCCGGCCCCGAGCGTGAGGGAGTTCGCTACTTCTTACTCTCTCCACGATCCGAATCCTAACTGGTCTAATCGCCCACCCAAGGAGCAGATTGCCCGATGGCTGTGA ATGTTCTCTCGTTCCTTCCTTACTGCGACCGGAACCGCCGTATCCGCTTCTTCTCACTCATCTTTCTCCCTTCTGCGCCGCCTCCGTCCCCTCACTGCTATAGTCGCCGCTGATTTCCGGTCTCTCTCTCCGGCCCCGAGCGTGAGGGAGTTCGCTACTTCTTACTCTCTCCACGATCCGAATCCTAACTGGTCTAATCGCCCACCCAAGGAGCAGATTGCCCGATGGCTGTGA ATGTTCTCTCGTTCCTTCCTTACTGCGACCGGAACCGCCGTATCCGCTTCTTCTCACTCATCTTTCTCCCTTCTGCGCCGCCTCCGTCCCCTCACTGCTATAGTCGCCGCTGATTTCCGGTCTCTCTCTCCGGCCCCGAGCGTGAGGGAGTTCGCTACTTCTTACTCTCTCCACGATCCGAATCCTAACTGGTCTAATCGCCCACCCAAGGAGCAGATTGCCCGATGGCTGTGA MFSRSFLTATGTAVSASSHSSFSLLRRLRPLTAIVAADFRSLSPAPSVREFATSYSLHDPNPNWSNRPPKEQIARWL Homology
BLAST of CmUC05G083860 vs. NCBI nr
Match: XP_022142853.1 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like [Momordica charantia]) HSP 1 Score: 121.7 bits (304), Expect = 2.8e-24 Identity = 66/76 (86.84%), Postives = 67/76 (88.16%), Query Frame = 0
BLAST of CmUC05G083860 vs. NCBI nr
Match: XP_038904331.1 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like [Benincasa hispida]) HSP 1 Score: 119.0 bits (297), Expect = 1.8e-23 Identity = 64/76 (84.21%), Postives = 67/76 (88.16%), Query Frame = 0
BLAST of CmUC05G083860 vs. NCBI nr
Match: XP_038892356.1 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like isoform X1 [Benincasa hispida]) HSP 1 Score: 118.2 bits (295), Expect = 3.0e-23 Identity = 64/76 (84.21%), Postives = 66/76 (86.84%), Query Frame = 0
BLAST of CmUC05G083860 vs. NCBI nr
Match: XP_038889853.1 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like [Benincasa hispida]) HSP 1 Score: 117.5 bits (293), Expect = 5.2e-23 Identity = 64/76 (84.21%), Postives = 66/76 (86.84%), Query Frame = 0
BLAST of CmUC05G083860 vs. NCBI nr
Match: KAG7031062.1 (Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 112.8 bits (281), Expect = 1.3e-21 Identity = 62/76 (81.58%), Postives = 64/76 (84.21%), Query Frame = 0
BLAST of CmUC05G083860 vs. ExPASy Swiss-Prot
Match: Q9LKA5 (Multiple organellar RNA editing factor 8, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MORF8 PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 6.4e-08 Identity = 37/74 (50.00%), Postives = 46/74 (62.16%), Query Frame = 0
BLAST of CmUC05G083860 vs. ExPASy TrEMBL
Match: A0A6J1CPB1 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111012864 PE=4 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.3e-24 Identity = 66/76 (86.84%), Postives = 67/76 (88.16%), Query Frame = 0
BLAST of CmUC05G083860 vs. ExPASy TrEMBL
Match: A0A6J1FV23 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447113 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 3.1e-21 Identity = 61/76 (80.26%), Postives = 63/76 (82.89%), Query Frame = 0
BLAST of CmUC05G083860 vs. ExPASy TrEMBL
Match: A0A6J1FMC0 (multiple organellar RNA editing factor 8, chloroplastic/mitochondrial isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447113 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 3.1e-21 Identity = 61/76 (80.26%), Postives = 63/76 (82.89%), Query Frame = 0
BLAST of CmUC05G083860 vs. ExPASy TrEMBL
Match: A0A5A7UT11 (Multiple organellar RNA editing factor 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold233G00540 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 8.9e-21 Identity = 60/75 (80.00%), Postives = 64/75 (85.33%), Query Frame = 0
BLAST of CmUC05G083860 vs. ExPASy TrEMBL
Match: A0A5D3CZ72 (Multiple organellar RNA editing factor 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G00090 PE=4 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 8.9e-21 Identity = 60/75 (80.00%), Postives = 64/75 (85.33%), Query Frame = 0
BLAST of CmUC05G083860 vs. TAIR 10
Match: AT3G15000.1 (cobalt ion binding ) HSP 1 Score: 57.8 bits (138), Expect = 4.6e-09 Identity = 37/74 (50.00%), Postives = 46/74 (62.16%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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