CmUC04G079490 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTCCGTCCGAGACAGACAAACTCAAAAGATCCCCTTCGTTCACAAGGCTTAGAAACAACCGGATAGTGTCACCGATACGCAGTTTTTTGGAGGGACGAAGCTAAGACTTTCTTTTTCTCAACCTCCCTGATTTTCAAGGTTTCTTCTTATTCAACTTCCATTGCTTTCTTTTTCCTTCTTCATGCTTTTGCATTTTAGTTTTCTGCTTTTCTTCTGATCATTGGGTTTTAGGGCTTTCTGTGGAATTGCATGTTGTGGGTTGGAATTTTTTTGCCTTTCTTTTGGGGGTATGATTTTGGGTTCTTGTAATCTTACCAATTGGTTGAAATTTGAAATTTTGAACTGTGGTTTCTTGTAACCTGTAAGGTGGGGTGAGAGAAAGTTGAGGGATTTCTTTCTACCTTTTTTCTGCACACATTTTAGCTGCGATCGTTTTGCAGCAGAAAGGTGCTGATTTTTGGTTGGCTTGTTTTAGAAGAAAGGGTTTCTATCTTTTGTTTTTCGTGGGGAATATACTGTTGTTGAAAAATATAGCTTTAAAAGTTGTTGATCAGAAAATTAAAATCTTTTGTTTTGGGGGAGGAGTTGATTTTAACAATGTGACCTCGCCTTTTATGATACAATTACTTGGAGTTTGAAGTTCTTTTGCGGTTTCTCTTTTTCTGTAGCTGAGGGTTTCGAGATTGAGGGAAACTGAACCCAAGAGAAACGTTTGAAGTTATGTGTTCTTTTTTTTTGCTTTTAGAATACAACTTCAAACTATTTTTATAGACAAGTTACTGATAATTCATCAACTTCAATCTCTGTGTTTTAGTTTCTTTGAATAATAGCTTTATTAATGTGAGATGTGAAATAAGGGCAATATCTTGTCATTTGTCGAAGTAATGTCTTTGATGATGCAGAAGCTTTTGTTTTTGTCCAAGAATGGGTGATCACATGGTTTTGTGTGTGGACCGCCTCATTACACCCGAAAGTTTGCAGTCGCTGCAGGGAACTACTGCTCCAGGATCTTCTTTAGAATCTTCATCTTCTCAAAATTCAGAGCCACCTGTTTGTGCTATTGCTGTTGAAGATGTGGATGAACATGATGGATCCGAAGAAGACCCACTTATACAGACAGTTGAATGTCGAATATGTCAGGAAGAGGACAGTATTAAGAATTTGGAGGTTCCTTGTGCTTGCAGTGGCAGCTTGAAGGTATAGGTACCATTTACTAACACTTCTATTGCAATGGTCCTTGTAGTTTAACAAAATGGGTCTCCAATCAAGAAACAATTAATCAGAAGAAGAGTATATTTTGCAAATGTAACATGCCTTGTAGAGTTGTTGTTATACTTCTACTCTGTATGAACTTGTGAATCCTTTGGTGGTTGGTTTGCTTTGCTCACTTGACTTAAAGGGGCAAAAAGAACCAATCGTGATTGCCTTTATTGCTTCTGCGCACCGTTTCTATTTTAAAAAATGTGAAGAGATTTTTACCTGACTTGAATTGTGTGGGAGGAGAGCATGATAGAAGAGTTCATTTTCAATTCTTAACTTTCATCTGTATTCTTGTATTAGTTGGTTTTAGTCAAGATAATGGGATAATGTAATTCCATGGGAATGTATAACGTGTTCTTTCTGTTACAAGTAACATTGGAAAAAACCTGTTTTTGAGGCTGGGGTACTGTAGTTCTCTTGACAGAGGACACACCACATTTCAAGCCGCACCTTTGAGTTGTTTAATTAAACCTTGTGCCATGACGCCTTGGAGAAGTCTGATTTTAAATTTTATCATTATCATTACTGATAAGTTTGTTCTGTTTTAGATGTTTCTGATTCTATTCATTTCTCTATTCCAGTATGCTCACAGGAAATGTGTCCAGCGATGGTGCAATGAGAAGGGAGATATAACTTGCGAAATCTGTCATCAGGTAAATTATATCACCACCATTAGAAAATCTGGAATATTTGTTGTTATATTTAGTTTCTAAGGGGATTCTTCTGGCTGATTAGTGATCAACCAGTCAAACCAAGAAGTTAGTAGAAAAAAACAATCTTTTTATTTGGAAGCTACAATTGGCTGTACCTTTGTATATGGTGAATCATTGGTATTATCAAGCGTGTACGTATCAGGCTTATGAAAAAAGATGCAGATGGTGGTTAGGTTGAAGGTTGATGTGTTTAATACATTATGGAATATTATTGTGATGTTGTAATATCTGGCTTTTTTGCACAATATAAGCTCGTGCTTGAATGCTTGAGGAAATATTAATGATGGCTAGAGTCTAACTTATATGGATGCGAGACTTTCTCCCTCCTCTGACTTAAGTAAATAACATCCTGATTAGATGGATATGTTTTATAAAACAAAAAATCGCATCCTGATTCTCATGTTTTACTCCTAGTACTGGGAATTATTTTCATTTATGGGAAGGTCAAATCAACATGTTGATATTTTAATTCACTTGTTTACAGAATTATCAGCCTGGTTATACCTTGCCCGTACCTCCCCCTCACTCTGAAGATGCCACCATTGACGTGAGGCAAGTTTAGGTTCACCTAGTTTAATGATGTGTACTTTGGTTCATGAATTTCCGCTAACACGTAGTTTCTGAAGGTTCTATTAATGTTTATTCTATGAATTGCTTCTCTATCTTGTCTACTACAGAGGCTGTCAGATCTAATCTTTGGTTCTGTTCCTCAAATGTGTTTGCAGTGAAGGTTGGGCAGTCTCTGAAACTGCTTTAGATTTGCATGATCCACGACTTTTAGCTATGGCAGCAGCAGAACGCCACTTTCTTGAGGCAGAATATGATGAATATGCAGATGCCAGTGCGAACGGAACAGCATTTTGCCGATCTGCTGCTCTGATTGTGAGACTCTGTCTTTCTTGTTAGATACTGAATTTTATTAATCCGAAGTTGGTTGGAGTCTTTCAACATCAAGATGTTCTGTAGCTTTATACCATATCTGGATACTTCTCTCTAAATATTTCAACATCAAGATGTTCTGTTTTTAACACACCATAATGTTGATTATTACGGTTGCTTTGCCACAGTTGTTGGCTCTTTTACTGTTGAGGCATGCTCTATACCTTACAAATGGTGATGGAGAAGATGATGCATACACTTTCTTCTCGGTAAGTAAGACATTGATATTTTTCCCCCTTCAATACTATTTTATGTTTGTGTACTGGTTATTGTTAACTTTTATGTAACATTGTCAGCTTTTATTGCTGCGAGCTGCCGGGTTTCTTCTTCCTTGCTACATAATGGCATGGGCCATCAGCATACTACAGCGTCGAAGACAAAGACAGGTGTGTACTAAAGAGCTGAATTTATGCTTCACATTTGCAAAACTTCAGTAATCTTCTGGTTTTTGTGCTTCAAAATGTTTATGAAAAACCTGAATTTATTGTTGTTTGATCTTTTACTTCTCTTACAGGAAGCTGCAGCGCTTGCAGCAACTGAAGTTGCATTTATGCTGCAGGCAGCACAAAGTCAGAGCCTTCAGTTTACTATCGCTCCAGGGCCTGTGGTTACTCCTCATCAAGAACCACTCCAATAA CTCCGTCCGAGACAGACAAACTCAAAAGATCCCCTTCGTTCACAAGGCTTAGAAACAACCGGATAGTGTCACCGATACGCAGTTTTTTGGAGGGACGAAGCTAAGACTTTCTTTTTCTCAACCTCCCTGATTTTCAAGAAGCTTTTGTTTTTGTCCAAGAATGGGTGATCACATGGTTTTGTGTGTGGACCGCCTCATTACACCCGAAAGTTTGCAGTCGCTGCAGGGAACTACTGCTCCAGGATCTTCTTTAGAATCTTCATCTTCTCAAAATTCAGAGCCACCTGTTTGTGCTATTGCTGTTGAAGATGTGGATGAACATGATGGATCCGAAGAAGACCCACTTATACAGACAGTTGAATGTCGAATATGTCAGGAAGAGGACAGTATTAAGAATTTGGAGGTTCCTTGTGCTTGCAGTGGCAGCTTGAAGTATGCTCACAGGAAATGTGTCCAGCGATGGTGCAATGAGAAGGGAGATATAACTTGCGAAATCTGTCATCAGTCAAACCAAGAAGTTAGTAGAAAAAAACAATCTTTTTATTTGGAAGCTACAATTGGCTGTACCTTTGTATATGGTGAATCATTGGTATTATCAAGCGTAATTATCAGCCTGGTTATACCTTGCCCGTACCTCCCCCTCACTCTGAAGATGCCACCATTGACTGAAGGTTGGGCAGTCTCTGAAACTGCTTTAGATTTGCATGATCCACGACTTTTAGCTATGGCAGCAGCAGAACGCCACTTTCTTGAGGCAGAATATGATGAATATGCAGATGCCAGTGCGAACGGAACAGCATTTTGCCGATCTGCTGCTCTGATTTTGTTGGCTCTTTTACTGTTGAGGCATGCTCTATACCTTACAAATGGTGATGGAGAAGATGATGCATACACTTTCTTCTCGCTTTTATTGCTGCGAGCTGCCGGGTTTCTTCTTCCTTGCTACATAATGGCATGGGCCATCAGCATACTACAGCGTCGAAGACAAAGACAGGAAGCTGCAGCGCTTGCAGCAACTGAAGTTGCATTTATGCTGCAGGCAGCACAAAGTCAGAGCCTTCAGTTTACTATCGCTCCAGGGCCTGTGGTTACTCCTCATCAAGAACCACTCCAATAA ATGGGTGATCACATGGTTTTGTGTGTGGACCGCCTCATTACACCCGAAAGTTTGCAGTCGCTGCAGGGAACTACTGCTCCAGGATCTTCTTTAGAATCTTCATCTTCTCAAAATTCAGAGCCACCTGTTTGTGCTATTGCTGTTGAAGATGTGGATGAACATGATGGATCCGAAGAAGACCCACTTATACAGACAGTTGAATGTCGAATATGTCAGGAAGAGGACAGTATTAAGAATTTGGAGGTTCCTTGTGCTTGCAGTGGCAGCTTGAAGTATGCTCACAGGAAATGTGTCCAGCGATGGTGCAATGAGAAGGGAGATATAACTTGCGAAATCTGTCATCAGTCAAACCAAGAAGTTAGTAGAAAAAAACAATCTTTTTATTTGGAAGCTACAATTGGCTGTACCTTTGTATATGGTGAATCATTGGTATTATCAAGCGTAATTATCAGCCTGGTTATACCTTGCCCGTACCTCCCCCTCACTCTGAAGATGCCACCATTGACTGAAGGTTGGGCAGTCTCTGAAACTGCTTTAGATTTGCATGATCCACGACTTTTAGCTATGGCAGCAGCAGAACGCCACTTTCTTGAGGCAGAATATGATGAATATGCAGATGCCAGTGCGAACGGAACAGCATTTTGCCGATCTGCTGCTCTGATTTTGTTGGCTCTTTTACTGTTGAGGCATGCTCTATACCTTACAAATGGTGATGGAGAAGATGATGCATACACTTTCTTCTCGCTTTTATTGCTGCGAGCTGCCGGGTTTCTTCTTCCTTGCTACATAATGGCATGGGCCATCAGCATACTACAGCGTCGAAGACAAAGACAGGAAGCTGCAGCGCTTGCAGCAACTGAAGTTGCATTTATGCTGCAGGCAGCACAAAGTCAGAGCCTTCAGTTTACTATCGCTCCAGGGCCTGTGGTTACTCCTCATCAAGAACCACTCCAATAA MGDHMVLCVDRLITPESLQSLQGTTAPGSSLESSSSQNSEPPVCAIAVEDVDEHDGSEEDPLIQTVECRICQEEDSIKNLEVPCACSGSLKYAHRKCVQRWCNEKGDITCEICHQSNQEVSRKKQSFYLEATIGCTFVYGESLVLSSVIISLVIPCPYLPLTLKMPPLTEGWAVSETALDLHDPRLLAMAAAERHFLEAEYDEYADASANGTAFCRSAALILLALLLLRHALYLTNGDGEDDAYTFFSLLLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATEVAFMLQAAQSQSLQFTIAPGPVVTPHQEPLQ Homology
BLAST of CmUC04G079490 vs. NCBI nr
Match: KAA0036086.1 (RING/FYVE/PHD zinc finger superfamily protein isoform 1 [Cucumis melo var. makuwa]) HSP 1 Score: 500.4 bits (1287), Expect = 1.2e-137 Identity = 267/318 (83.96%), Postives = 277/318 (87.11%), Query Frame = 0
BLAST of CmUC04G079490 vs. NCBI nr
Match: XP_004137411.1 (uncharacterized protein LOC101217964 [Cucumis sativus] >KGN64004.1 hypothetical protein Csa_013088 [Cucumis sativus]) HSP 1 Score: 498.4 bits (1282), Expect = 4.5e-137 Identity = 265/318 (83.33%), Postives = 270/318 (84.91%), Query Frame = 0
BLAST of CmUC04G079490 vs. NCBI nr
Match: XP_008442459.1 (PREDICTED: uncharacterized protein LOC103486295 [Cucumis melo] >XP_008442534.1 PREDICTED: uncharacterized protein LOC103486295 [Cucumis melo] >XP_008442612.1 PREDICTED: uncharacterized protein LOC103486295 [Cucumis melo] >TYJ98894.1 RING/FYVE/PHD zinc finger superfamily protein isoform 3 [Cucumis melo var. makuwa]) HSP 1 Score: 497.3 bits (1279), Expect = 1.0e-136 Identity = 264/318 (83.02%), Postives = 270/318 (84.91%), Query Frame = 0
BLAST of CmUC04G079490 vs. NCBI nr
Match: XP_022948839.1 (uncharacterized protein LOC111452382 [Cucurbita moschata] >XP_022948840.1 uncharacterized protein LOC111452382 [Cucurbita moschata] >XP_022948841.1 uncharacterized protein LOC111452382 [Cucurbita moschata] >XP_023524494.1 uncharacterized protein LOC111788394 [Cucurbita pepo subsp. pepo] >XP_023524495.1 uncharacterized protein LOC111788394 [Cucurbita pepo subsp. pepo] >XP_023524496.1 uncharacterized protein LOC111788394 [Cucurbita pepo subsp. pepo] >KAG7037106.1 putative E3 ubiquitin ligase SUD1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 496.1 bits (1276), Expect = 2.2e-136 Identity = 261/318 (82.08%), Postives = 270/318 (84.91%), Query Frame = 0
BLAST of CmUC04G079490 vs. NCBI nr
Match: XP_038895194.1 (uncharacterized protein LOC120083491 [Benincasa hispida] >XP_038895195.1 uncharacterized protein LOC120083491 [Benincasa hispida] >XP_038895196.1 uncharacterized protein LOC120083491 [Benincasa hispida]) HSP 1 Score: 493.8 bits (1270), Expect = 1.1e-135 Identity = 263/318 (82.70%), Postives = 267/318 (83.96%), Query Frame = 0
BLAST of CmUC04G079490 vs. ExPASy Swiss-Prot
Match: Q0P496 (E3 ubiquitin-protein ligase MARCHF4 OS=Danio rerio OX=7955 GN=marchf4 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.9e-06 Identity = 22/62 (35.48%), Postives = 36/62 (58.06%), Query Frame = 0
BLAST of CmUC04G079490 vs. ExPASy Swiss-Prot
Match: Q80TE3 (E3 ubiquitin-protein ligase MARCHF4 OS=Mus musculus OX=10090 GN=Marchf4 PE=2 SV=3) HSP 1 Score: 53.9 bits (128), Expect = 3.8e-06 Identity = 33/90 (36.67%), Postives = 48/90 (53.33%), Query Frame = 0
BLAST of CmUC04G079490 vs. ExPASy Swiss-Prot
Match: Q86YJ5 (E3 ubiquitin-protein ligase MARCHF9 OS=Homo sapiens OX=9606 GN=MARCHF9 PE=1 SV=2) HSP 1 Score: 53.9 bits (128), Expect = 3.8e-06 Identity = 22/58 (37.93%), Postives = 35/58 (60.34%), Query Frame = 0
BLAST of CmUC04G079490 vs. ExPASy Swiss-Prot
Match: Q3TZ87 (E3 ubiquitin-protein ligase MARCHF9 OS=Mus musculus OX=10090 GN=Marchf9 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.8e-06 Identity = 22/58 (37.93%), Postives = 35/58 (60.34%), Query Frame = 0
BLAST of CmUC04G079490 vs. ExPASy Swiss-Prot
Match: F4JKK0 (Probable E3 ubiquitin ligase SUD1 OS=Arabidopsis thaliana OX=3702 GN=SUD1 PE=1 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 3.8e-06 Identity = 39/118 (33.05%), Postives = 50/118 (42.37%), Query Frame = 0
BLAST of CmUC04G079490 vs. ExPASy TrEMBL
Match: A0A5A7T1I5 (RING/FYVE/PHD zinc finger superfamily protein isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold112G00810 PE=4 SV=1) HSP 1 Score: 500.4 bits (1287), Expect = 5.7e-138 Identity = 267/318 (83.96%), Postives = 277/318 (87.11%), Query Frame = 0
BLAST of CmUC04G079490 vs. ExPASy TrEMBL
Match: A0A0A0LSR3 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G033230 PE=4 SV=1) HSP 1 Score: 498.4 bits (1282), Expect = 2.2e-137 Identity = 265/318 (83.33%), Postives = 270/318 (84.91%), Query Frame = 0
BLAST of CmUC04G079490 vs. ExPASy TrEMBL
Match: A0A1S3B5L6 (uncharacterized protein LOC103486295 OS=Cucumis melo OX=3656 GN=LOC103486295 PE=4 SV=1) HSP 1 Score: 497.3 bits (1279), Expect = 4.8e-137 Identity = 264/318 (83.02%), Postives = 270/318 (84.91%), Query Frame = 0
BLAST of CmUC04G079490 vs. ExPASy TrEMBL
Match: A0A5D3BIK6 (RING/FYVE/PHD zinc finger superfamily protein isoform 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G00910 PE=4 SV=1) HSP 1 Score: 497.3 bits (1279), Expect = 4.8e-137 Identity = 264/318 (83.02%), Postives = 270/318 (84.91%), Query Frame = 0
BLAST of CmUC04G079490 vs. ExPASy TrEMBL
Match: A0A6J1GB12 (uncharacterized protein LOC111452382 OS=Cucurbita moschata OX=3662 GN=LOC111452382 PE=4 SV=1) HSP 1 Score: 496.1 bits (1276), Expect = 1.1e-136 Identity = 261/318 (82.08%), Postives = 270/318 (84.91%), Query Frame = 0
BLAST of CmUC04G079490 vs. TAIR 10
Match: AT3G47550.3 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 295.8 bits (756), Expect = 4.1e-80 Identity = 181/328 (55.18%), Postives = 208/328 (63.41%), Query Frame = 0
BLAST of CmUC04G079490 vs. TAIR 10
Match: AT3G47550.6 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 295.8 bits (756), Expect = 4.1e-80 Identity = 181/328 (55.18%), Postives = 208/328 (63.41%), Query Frame = 0
BLAST of CmUC04G079490 vs. TAIR 10
Match: AT5G62460.1 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 287.7 bits (735), Expect = 1.1e-77 Identity = 178/335 (53.13%), Postives = 210/335 (62.69%), Query Frame = 0
BLAST of CmUC04G079490 vs. TAIR 10
Match: AT3G47550.2 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 270.8 bits (691), Expect = 1.4e-72 Identity = 163/287 (56.79%), Postives = 184/287 (64.11%), Query Frame = 0
BLAST of CmUC04G079490 vs. TAIR 10
Match: AT2G02960.2 (RING/FYVE/PHD zinc finger superfamily protein ) HSP 1 Score: 253.8 bits (647), Expect = 1.8e-67 Identity = 152/274 (55.47%), Postives = 182/274 (66.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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