CmUC04G079050 (gene) Watermelon (USVL531) v1

Overview
NameCmUC04G079050
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionProtein TIC 214
LocationCmU531Chr04: 25498644 .. 25505795 (+)
RNA-Seq ExpressionCmUC04G079050
SyntenyCmUC04G079050
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGAAAGCTATAGTAGCTTACTGGAGTGGCCACCCATGGCGGCCAGAAGGAGCAATGATAGAGCCAGAGCAGCCATGGCAGAGAGAAAATGGAAAGTTGAAGAAGAAGGTATGAAGGCAAGTGGAGGGGAAGGTTTTTAGTCTGTCTTTGTTGTAGAGAGACAAACAACTAAAATAGGGAGCAGATTTGAGAGTGGTAGAGAGCGGCGGAAATTTAAAAAAATAATAATAAAAAAAAATATATATATATATGTGAAAGCTAAATAAATTTTAAAATTAGTGCATGTTCGTAGTGACGATGATCATCAAATTTAAATAATACTTTGGTCTTATACTTTTGATTTTAGTTCAGTTTGGTCTAATTTTAATTTTAATTTAATATAGTCCTGATAATTTGAAAAGGTAACTATTTTGGTCATTTCGTTTTCATTTTTATTGGATCAAAATGACCACTTTTCTAAAGTTCAAATATCAAAATGATCAAAAGTTGAAAATACAAATACCAAAATAAATCAAAGTTAAAAAGTATAGGGACCAAAATGAAAATTATGAAAGTATACATCTAAAAATGAACTAAAACAATAAAATACAAAGGCTAAAGTAGTATTTAAATCTAGAATGAATGGTCAACTTTTTTTTTTTTTTTCTTTCCTTTTTTTCTCTTTAGTTTCTCTTTTGTTTTTTTGCTTTAAAGCAATACTCCTACAATTCACCCCACTACTTTGCTCACCGTCACGTCCTTTTGCTTTTCCAATCCCTTTTATTTCTTTTTCTGTTTTTGTGTTTGAAGTTATATGGTCATGAATCTTATCTTCGTGTCTCATCTTTTCCATTTTTTCTGTTCGTAGTATTTTAGAAAATATAATTATTTTAAATAACAAATTAGTTAGAAATATTTTAAAATATATTAATTCATAAACATCTATAATAATATTTATTAGTGTCTATCGTTATATAGGTAAATAAGTTGACTAATTTTGCTATATTTGATAATAACTCTTTAAAAATTTTATATTTTTAATTTATTTTTAAGGGCAAATATCAATTTACACCCTTAAGTATCAATTTCAACCCTAAACTTTGAATTGTATCAATTAAACTCTAAACTATGATTGTATCAATTAAAACCTTATACTTTCATAAGTGTATCGATTTAAATCATGAACTAATCCTCCATTATGTTTTATTTGGATACATTCGTGAAAATTCATAGTTTAAATTGATATATTTAAGAAAGTTTAAGGTTTATAATATATACTTGTGAATATTTAAGGTTTTAATTGATACAATTATTAGTTTGAAGTTTAAATCAATACAACCCTAAATTTGATGGTTTAAATTGATACAATTATTAGTTTGGGGTTTAAATTGATACAACTCCAGAAGTTTAAGGTATAAATTAATATTGACCCTATTTTTAATTTTCTATTATATTAATTTCAGTTCTTGGTAATGTTTGTATTTAATATTTGTGATTTTAAACCATACAAACCCTATAGGATGGTTGAATTTAAAACCTTTAATAAAAAAAAAAAAATCATTTGTGAACATTTTGATTTAATTGACACTAGCTCAATTTAATGAAAACATAGCTAATAGATATATATTGTAACCAACTAAGCACACTTTATATTAAGATGTACTATTTATTTAATTTATACTTGCTTCAGGCGAAATATTCAATATGTTCTTAGAAAAAAAAGTTTTTTACATACAACATAAGTAAAAGATTTGAATTATATATCTATATGTCAATTGAGTTATATTTGATTTGACTGAATTAAATTAACTATTTGAAAGAGTGTTTTGAGCGGATTGTGTGATAAAATTAATAAACAAATAAAAATCGACCAAATTTAAAAGTGTACACGTGTTGTTAAACAAAAGAAAGCAATGTCAGAATTAGGAATGACATGCACGTGATTTTTTATTTTTTATTTCTCATTTTAATGAATTGCTCCGCACTGTCTAGCTCTACTGATCAATGTATAAATTCTATGTATCAAACGACAAGTCTCAATACCTATGCATATTGGATGTTGAATCGAAAAAAAAAAGTAATAATAAAAAAATATATATAATTTAATAAACTTGTGTTAAATTATGAACGTGGCCTCTTACTTACATTTATGTGTTTAATAAGTATCTTAAATTTTAAAACATTATAAATATATATGAATTTTTAATCTTGTATATGAAAAGCTATACTATTTAAAGTTCACTGGCATATTACTATTACGCATAAATCTAGAAATTTATGAGCTAAACTTGACGCATTTTGTAAGTTAATTAAATTATTAGGTCCTATTTAGTAATCATAATTCAATTTTTTATTGTTAGGTTTTAAAAATTAAGCATGGTTTTTCTCTACCCTTTTTATATCAATAGGGAGCTACGAGCAAGGCAGCTCTGCTCCAGAAAGACAAGAAACCAGCAGGTCCTTTTCCGCTTGATCGCTCACTCATGAGCAAAGCCGCCTTTTGCCGACGGAGTAGAGGAATTGGTCGACTTAGCGATCAAAGAATGTCGTTGTTACAGGGACGCGTCCCCACTAGAGATTCTAGAATGGACGATTGATAAGAAAAAGGAAGAGCAGCTTTTCCCCTCATAACTCAATTTGGAAGTCGGCCCAATGGAAGAACCACCATAAAATAAAGAAGGACACAGCGCAAAATTTCCATTAGTAGATATTCTTTCAGCTTGCTCATTCAGATTACCCCAAGAATTTTGGGTCAAATAGGGAAAGTTTTCTATCCTTGGTGGGTTCAATGACCCTAGCCGTCTATCCTAATAGTACACTAATGCCAGTTTGAGGCAAGCTTATCCCAATAAGAAGGGCATAGATCTTGGTTTTTCTTTTTGTTGGTACGCCGCTCCGTTCGCTATTGCCCTCTCGCGCGGTATGCCCACTCCTAAGATGAGGAGGTAGGTTCCAGCTCTAATATTCCATCAGGTCAGATCGGCTAATTCCAGTGTTCCCATGTGTGCGCCTGCCAGGCTATTGATACATATGCTGTCGGAGCAATCAACGGGTTTCATTCGTGTGTATGCTAAGTAAGGCACAAAGGTGAAATAAGTTGAATTGAACCTTCATTCTCTCTTTCTTTCCCTTGAGGTAAGGTCTATGAAGATGAAATAAGGGATGCATTCAATCTAGTGGAATTAAACCCTTTTCTTGATCTTGACTCTCCTAAGGGTCTATTAAGAAGAGGAATTGCAAGAGGCTCGACCAATTCCTCTCCCCTTGGGATCCTTCCTCATCAAAAGAAGAGATCCACTCATGCATAGCTTCGACTAAGAATAATAATACAAGGGAGTCTTCTTCTTCGAAGTCGCCCTAGGTTCCGATCCACCATCGGTGAGACCCCTCTTGCTTAAGTACTGGTTCCCTTCACTAAAAGAAAGAACTCGTTGAGACGAGGTCCATTGTTAGGAGAACCTCGTCTCTCCCCACAAGGGTTGATGAATGTGACACAAATAGAAGGATGTCGCGGAGACAGGATTTGCACCTGTAACCTTAAGGTGTTGAGCCTGACGAGCTAACCAATTGCTCCACTTAGCGGCGGAAGATGCTTTCCGTATGAACTAATGAGCGGGCCAGGGTCTCCTTTGTCTTGGCTAGGAAGACTAGTTCATAAAGAGATGCATGTGAGACTCTTTTTGTTGATACCGATCACGGATCTATTATGAAACAATATTGATCTCTTTCTTTGAGCACATCGGCTATCATGCTGGAACTTCAAGCTATTGGGATGGGAAAGAAAGGCAAAGCGCTTCTTTGAGAACGCTTTTTCAGAGGGTAGGTCGAAGACAAGGAATCCTTTTAGAAGTGATAAGAATAGCATCTCTTACTCACTTTAGCTTCCTTTGCTAAAGTCCGAGGCCTATAACTCGTTCTGGTGAGCGGGGTTGCCTGAGAACGGCGAGAATGGGGTCAAAAACACGCCTGGGATGTGGGAGCTGAGTCGCGCCAACACTTGGAGGAATGAGATAAGCTCCCATTCACGAGGCCCAGAAGGTTTAATAGAATCAGAATGCGCGGGTGCCCTTCAGAACTACCTTGGAAAGCGCAGTCGTGAACCAATGCCCAGAACTGCCAAAACCGAGAACTCAGTCACGCGTCTGGTAACCAGTTGAGATCGGGCTACGGCCTCTTTTCCTTAAAAAAGGAAATGGAACGGAATCCTTTTCTTCCCGTCCGAGAGACTCAACTAAGGCAATCCCATGCTGTGCCACCCAAAGAAAGCGCTTTCTTTTTTCAGGCCTCCCGGCAACATTACATGCTAGTTTAGTTGGTGGAGCTGTTGTAGCAAGTCGAGTAACTTACCTTTTGACTTTGGCTTCTTCTTTCTAGCGATAGTTGCCAAATGCTCTTGTAGTTCGGTCTGCCTTGCCTTCCTTTGAAGCAGCGATATCCTGTTTTGAAGCCACTAATAACGGCTTGGCTCTTTGTTCGACCAGAATTCATATAATATATACTAGTCGGTGAAACTCCCCCCCTTTGAAGCCTATGCTTGCAACTTGACCAGAATTCATATATTTTTTTGTTTTACGCCCCGTAATTCTTCCTCAGCCAGGCTCGGGCAGAATAGTAGAGCAAGTACAAGTATTAGTAGAATAGCAAAAATGTGTTCCTCGTCATTAATATGTTTGCTCGCGGTAATTGTGACCTCTCGGGAGAATCGATGACTGCATCAAAGATGCACTTGCTAGTACTAGTACATCTGAGAATTCTTAATTGGCTAGTTGTAAATAGACCCAGACTGTGGAACAAAGGATTATCTCGGACCTACACCGAGGTATTGACGGTGATTCTCAAATATCGCAGAACAGAATTTGATACGATGAGATAGAATGCAATAGAAACAAAGACACAGGGAACGGGTTACCTACTCTTAACGGTCAAAGCGAACCCTTTCATTCCGAATTCTTTAATTCGGAATGAATCAAATCTCCCCAAGTAGGATTCGAACCTACGACCAATCGGTTAACAGCCGACCGCTCTACCACTGAGCTACTGAGGAACAACGGTAAATTAGGTCTCAGAGAATTCAATTCCCGTTCTCAACCCATGACCAATATGAGCTCGAGGTTTCCTTCGTAACTCCCGGAACTTCTTCGTAGTGGCTCCGTTCCATGCCTCATTTCATAGAGAACCTCAAAGTGGCTCTATTTCATTATATTCCATCCATATGCCAATTCCATTCATTTAATATCCCTGTGGTGTCATTGAGATAAGAGATGTCGTTTCTAGTCTATCTGTTTCTATTTCTATATATATGAAAAGTTAAAAAATCATCATATAATAATCCAGAAATTGCAATAGAAAAGAAAAAGGGAGGTTTGTGATGATTTTAAAATCTTTTATACTAGGTAATCTAGTATCCTTATGCATGAAGATAATCAATTCGGTCGTTGTGGTCGGACTCTATTATGGATTTCTGATCACATTCTCCATAGGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGGTTTTATTACGGGACAGCTCATGATGTTCATATCGATCTATTATGCGCCTCTGCATCTAGCATTGGGTAGACCTCATACAATAACTGTCCTAGCTCTACCGTATCTTTTGTTTCATTTCTTCTGGAACAATCACAAACACTTTTTTGATTATGGATCTACTACCAGAAACTCAATGCGTAATCTTAGCATTCAATGTGTATTCCTGAATAATCTCATATTTCAATTATTCAACCATTTCATTTTACCAAGTTCAATGTTAGTTAGATTAGTCAACATTTCTATGTTTCGATGCAACAACAAGATGTTATTTGTAACAAGTAGTTTTGTTGGTTGGTTAATTGGTCACATTTTATTCATGAAATGGGTTGGATTGATATTAGTCTGGATACAGCAAAATAATTCTATTAGATCTAATGGACTTATTAGATCTAATAAGTACCTTGTGTCAGAATTGAGAAATTCTATGGCTCGAATCTTTAGTATTCTCTTATTTATTACCTGTGTCTACTATTTAGGCAGAATACCGTCACCCATTGTTACTAAGAAACTGAAAGAAACCTCAGAAACGGAGGAAAGGGGGGAAAGCGAGGAAGAAACAGATGTCGAAATAGAAACCACTTCCGAAACGAAGGGGACTAAACAGGAACAAGAGGGATTCACCGAAGAAGATACTTCTCCTTCCCTTTTTTCGGAAGAAAAGGAGGATCCCCTCGGATGGTTCCACAATCGGTTCTACGTACAACAATGTGTTGAACTACTTCAACAAGTCTGCGTGTAAGATATCCAGCATCCGATGTTCGTACAGCAGTTTCCACAACTCCTTTCCGCGCGCATCACCGGTAAGATATATGCTGGTGATGGTGATCTTTTTCTCTTTCAGGGCACGGACAGCCTTGAACTCTTCCATGTCCCATAGAAAATTCTCGTTTAGATCGATATTTATCTGCTTCTTGTCTGGGCCAGAGCTCCATGCAAATTATCCTTTCAAAGTTGCAAAACACAATCCCTAGCGTAAGTCGCAATCAACTTGATGCACTTTGTTGGACTCATGAGTATAGGACGAGGACGTAATGTGAGGTCGTGGGCGCCCATATACCACTTCAAACGGTCTTTGTTTGGTTGCCGAATGATAAGTGGTATTGTACCACTATTCTGCCCATGGTAACCAACGTACCCATTCCCTTGGTCTATCGCTTGTAAAGCATCCCAGGTAGTTCTCTAAGCACTGGTTAACCACCTCGGTCTGGGGGTGGAAAGCTGTACTCATGTTAAATTGTGTCCCTTGTAAACGAAAGAGCTCCTGCCAGAAATAGCTAATGAAGACCGGGTCCCCTGTCGCTGACAATTGAGTGTGGCATTCCATGCAATGAAGATATTATCGAAAAAGATCTGAGCGAGTGCTTTTCTTAAGCAAAAATGCTAATTGTGCTATTGCGTTCCATTACAAAGTCTTTAGACACCCTCCAATGCTTCAGGTTTGTTAAATGTGTCTATTTAGTCGTGTATTCTGGAATGGACACATTTCAATTCTATCTCATCGGGTACTCAACAGCTTCCTAAAGTACACTGACTTGTCCCTCAGTCGAAACACTAACGCACTCCTCGAGATATGA

mRNA sequence

ATGAAGGAAAGCTATAGTAGCTTACTGGAGTGGCCACCCATGGCGGCCAGAAGGAGCAATGATAGAGCCAGAGCAGCCATGGCAGAGAGAAAATGGAAAGTTGAAGAAGAAGGTATGAAGGCAAGTGGAGGGGAAGATTACCCCAAGAATTTTGGGTCAAATAGGGAAAGTTTTCTATCCTTGGTCAGATCGGCTAATTCCAGTGTTCCCATGTGTGCGCCTGCCAGGCTATTGATACATATGCTGTCGGAGCAATCAACGGGTTTCATTCGTGTGTATGCTAAGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGAATACCGTCACCCATTGTTACTAAGAAACTGAAAGAAACCTCAGAAACGGAGGAAAGGGGGGAAAGCGAGGAAGAAACAGATGTCGAAATAGAAACCACTTCCGAAACGAAGGGGACTAAACAGGAACAAGAGGGATTCACCGAAGAAGATACTTCTCCTTCCCTTTTTTCGGAAGAAAAGGAGGATCCCCTCGGATGGTTCCACAATCGGTTCTACGTACAACAATGTGTTGAACTACTTCAACAAGTCTGCGTTCGTGTATTCTGGAATGGACACATTTCAATTCTATCTCATCGGGTACTCAACAGCTTCCTAAAGTACACTGACTTGTCCCTCAGTCGAAACACTAACGCACTCCTCGAGATATGA

Coding sequence (CDS)

ATGAAGGAAAGCTATAGTAGCTTACTGGAGTGGCCACCCATGGCGGCCAGAAGGAGCAATGATAGAGCCAGAGCAGCCATGGCAGAGAGAAAATGGAAAGTTGAAGAAGAAGGTATGAAGGCAAGTGGAGGGGAAGATTACCCCAAGAATTTTGGGTCAAATAGGGAAAGTTTTCTATCCTTGGTCAGATCGGCTAATTCCAGTGTTCCCATGTGTGCGCCTGCCAGGCTATTGATACATATGCTGTCGGAGCAATCAACGGGTTTCATTCGTGTGTATGCTAAGGCCCTCTTATCTCTTCCTTCTCCGAGCTCGGGTTATGGAAGAAGGAACCGAGAAGAAAGTATCAGCAACAACAGAATACCGTCACCCATTGTTACTAAGAAACTGAAAGAAACCTCAGAAACGGAGGAAAGGGGGGAAAGCGAGGAAGAAACAGATGTCGAAATAGAAACCACTTCCGAAACGAAGGGGACTAAACAGGAACAAGAGGGATTCACCGAAGAAGATACTTCTCCTTCCCTTTTTTCGGAAGAAAAGGAGGATCCCCTCGGATGGTTCCACAATCGGTTCTACGTACAACAATGTGTTGAACTACTTCAACAAGTCTGCGTTCGTGTATTCTGGAATGGACACATTTCAATTCTATCTCATCGGGTACTCAACAGCTTCCTAAAGTACACTGACTTGTCCCTCAGTCGAAACACTAACGCACTCCTCGAGATATGA

Protein sequence

MKESYSSLLEWPPMAARRSNDRARAAMAERKWKVEEEGMKASGGEDYPKNFGSNRESFLSLVRSANSSVPMCAPARLLIHMLSEQSTGFIRVYAKALLSLPSPSSGYGRRNREESISNNRIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEEKEDPLGWFHNRFYVQQCVELLQQVCVRVFWNGHISILSHRVLNSFLKYTDLSLSRNTNALLEI
Homology
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BLAST of CmUC04G079050 vs. NCBI nr
Match: KAF9599033.1 (hypothetical protein IFM89_033378 [Coptis chinensis])

HSP 1 Score: 118.6 bits (296), Expect = 7.3e-23
Identity = 72/89 (80.90%), Postives = 76/89 (85.39%), Query Frame = 0 

Query: 95  KALLSLPSPSSGYGRRNREESISNNRIPSPIVTKKLKETSETEERGESEEETDVEIETTS 154
           +ALLSLPS SSGYGRRNRE      RIPSPIVTKKLKETS+ +ERG+SEEETDVEIETTS
Sbjct: 95  RALLSLPSLSSGYGRRNRE----GGRIPSPIVTKKLKETSKKKERGKSEEETDVEIETTS 154

Query: 155 ETKGTKQEQEGFTEEDTSPSLFSEEKEDP 184
           E KGTKQEQEG TEED S SL SEEKEDP
Sbjct: 155 EMKGTKQEQEGSTEEDPSLSLCSEEKEDP 179

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BLAST of CmUC04G079050 vs. NCBI nr
Match: QZL38742.1 (Ycf1 protein [Citrullus ecirrhosus])

HSP 1 Score: 115.2 bits (287), Expect = 8.1e-22
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 120 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 179
           RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE
Sbjct: 236 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 295

Query: 180 KEDP 184
           KEDP
Sbjct: 296 KEDP 299

[Close]
BLAST of CmUC04G079050 vs. NCBI nr
Match: YP_009431615.1 (Ycf1 [Citrullus amarus] >APW82521.1 Ycf1 [Citrullus lanatus subsp. vulgaris] >ASY96227.1 Ycf1 [Citrullus amarus])

HSP 1 Score: 115.2 bits (287), Expect = 8.1e-22
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 120 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 179
           RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE
Sbjct: 236 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 295

Query: 180 KEDP 184
           KEDP
Sbjct: 296 KEDP 299

[Close]
BLAST of CmUC04G079050 vs. NCBI nr
Match: YP_009326048.1 (Ycf1 [Citrullus lanatus] >YP_009348090.1 Ycf1 [Citrullus mucosospermus] >APW82946.1 Ycf1 [Citrullus lanatus subsp. vulgaris] >APD52540.1 Ycf1 [Citrullus lanatus] >APW82776.1 Ycf1 [Citrullus mucosospermus] >APW82861.1 Ycf1 [Citrullus mucosospermus] >APW83031.1 Ycf1 [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 115.2 bits (287), Expect = 8.1e-22
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 120 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 179
           RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE
Sbjct: 236 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 295

Query: 180 KEDP 184
           KEDP
Sbjct: 296 KEDP 299

[Close]
BLAST of CmUC04G079050 vs. NCBI nr
Match: APW82691.1 (Ycf1 [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 115.2 bits (287), Expect = 8.1e-22
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 120 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 179
           RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE
Sbjct: 236 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 295

Query: 180 KEDP 184
           KEDP
Sbjct: 296 KEDP 299

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BLAST of CmUC04G079050 vs. ExPASy Swiss-Prot
Match: Q0ZIW0 (Protein TIC 214 OS=Vitis vinifera OX=29760 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 7.1e-21
Identity = 58/64 (90.62%), Postives = 60/64 (93.75%), Query Frame = 0 

Query: 120 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 179
           RIPSPI+TKK+KETSETEERGESEEETDVEIE TSETKGTKQEQE  TEED SPSLFSEE
Sbjct: 239 RIPSPILTKKMKETSETEERGESEEETDVEIERTSETKGTKQEQERSTEEDPSPSLFSEE 298

Query: 180 KEDP 184
           KEDP
Sbjct: 299 KEDP 302

[Close]
BLAST of CmUC04G079050 vs. ExPASy Swiss-Prot
Match: Q06GT8 (Protein TIC 214 OS=Drimys granadensis OX=224735 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 6.0e-20
Identity = 59/64 (92.19%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 120 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 179
           RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEG TEED  PS  SEE
Sbjct: 236 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGSTEED--PSFCSEE 295

Query: 180 KEDP 184
           KEDP
Sbjct: 296 KEDP 297

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BLAST of CmUC04G079050 vs. ExPASy Swiss-Prot
Match: A6MM95 (Protein TIC 214 OS=Buxus microphylla OX=153571 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.3e-19
Identity = 56/64 (87.50%), Postives = 59/64 (92.19%), Query Frame = 0 

Query: 120 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 179
           R+P+PIVTKKLKETS+TEERGESEEE DVEIETTSETKGTKQEQE  TEED SPSL SEE
Sbjct: 236 RMPAPIVTKKLKETSKTEERGESEEERDVEIETTSETKGTKQEQERSTEEDPSPSLCSEE 295

Query: 180 KEDP 184
           KEDP
Sbjct: 296 KEDP 299

[Close]
BLAST of CmUC04G079050 vs. ExPASy Swiss-Prot
Match: Q49KU0 (Protein TIC 214 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.3e-19
Identity = 57/64 (89.06%), Postives = 58/64 (90.62%), Query Frame = 0 

Query: 120 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 179
           RIPSPIVTKK KETSETEERGE EEETDVEIETT ETKGT+QEQEG TEED  PSLFSEE
Sbjct: 239 RIPSPIVTKKFKETSETEERGEGEEETDVEIETTFETKGTRQEQEGSTEED--PSLFSEE 298

Query: 180 KEDP 184
           KEDP
Sbjct: 299 KEDP 300

[Close]
BLAST of CmUC04G079050 vs. ExPASy Swiss-Prot
Match: Q0G9G1 (Protein TIC 214 OS=Liriodendron tulipifera OX=3415 GN=TIC214 PE=3 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 5.1e-19
Identity = 58/64 (90.62%), Postives = 58/64 (90.62%), Query Frame = 0 

Query: 120 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 179
           RIPSPIVTKKLKETSETEERGES EETDVEIETTSETKGTKQEQE  TEED  PSL SEE
Sbjct: 236 RIPSPIVTKKLKETSETEERGESAEETDVEIETTSETKGTKQEQEASTEED--PSLCSEE 295

Query: 180 KEDP 184
           KEDP
Sbjct: 296 KEDP 297

[Close]
BLAST of CmUC04G079050 vs. ExPASy TrEMBL
Match: A0A1P8LE53 (Ycf1 OS=Citrullus mucosospermus OX=519315 GN=ycf1 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 3.9e-22
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 120 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 179
           RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE
Sbjct: 236 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 295

Query: 180 KEDP 184
           KEDP
Sbjct: 296 KEDP 299

[Close]
BLAST of CmUC04G079050 vs. ExPASy TrEMBL
Match: A0A1P8LFC3 (Ycf1 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=ycf1 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 3.9e-22
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 120 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 179
           RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE
Sbjct: 236 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 295

Query: 180 KEDP 184
           KEDP
Sbjct: 296 KEDP 299

[Close]
BLAST of CmUC04G079050 vs. ExPASy TrEMBL
Match: A0A343A8H0 (Protein TIC 214 OS=Citrullus lanatus OX=3654 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 3.9e-22
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 120 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 179
           RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE
Sbjct: 236 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 295

Query: 180 KEDP 184
           KEDP
Sbjct: 296 KEDP 299

[Close]
BLAST of CmUC04G079050 vs. ExPASy TrEMBL
Match: A0A249RXF8 (Protein TIC 214 OS=Citrullus rehmii OX=260675 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 3.9e-22
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 120 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 179
           RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE
Sbjct: 236 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 295

Query: 180 KEDP 184
           KEDP
Sbjct: 296 KEDP 299

[Close]
BLAST of CmUC04G079050 vs. ExPASy TrEMBL
Match: A0A249RX64 (Protein TIC 214 OS=Citrullus amarus OX=1567104 GN=ycf1 PE=3 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 3.9e-22
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0 

Query: 120 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 179
           RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE
Sbjct: 236 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 295

Query: 180 KEDP 184
           KEDP
Sbjct: 296 KEDP 299

[Close]
BLAST of CmUC04G079050 vs. TAIR 10
Match: ATCG01130.1 (Ycf1 protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.6e-04
Identity = 33/63 (52.38%), Postives = 34/63 (53.97%), Query Frame = 0 

Query: 120 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 179
           RIPSPI TKKLK                     TSET GTKQ+QE  TEE   PSLFSEE
Sbjct: 242 RIPSPIFTKKLK--------------------GTSETGGTKQDQEVSTEEAPFPSLFSEE 284

Query: 180 KED 183
            ED
Sbjct: 302 GED 284

[Close]
BLAST of CmUC04G079050 vs. TAIR 10
Match: ATCG01000.1 (Ycf1 protein )

HSP 1 Score: 44.3 bits (103), Expect = 1.6e-04
Identity = 33/63 (52.38%), Postives = 34/63 (53.97%), Query Frame = 0 

Query: 120 RIPSPIVTKKLKETSETEERGESEEETDVEIETTSETKGTKQEQEGFTEEDTSPSLFSEE 179
           RIPSPI TKKLK                     TSET GTKQ+QE  TEE   PSLFSEE
Sbjct: 242 RIPSPIFTKKLK--------------------GTSETGGTKQDQEVSTEEAPFPSLFSEE 284

Query: 180 KED 183
            ED
Sbjct: 302 GED 284

The following BLAST results are available for this feature:
BLAST of CmUC04G079050 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF9599033.17.3e-2380.90hypothetical protein IFM89_033378 [Coptis chinensis][more]
QZL38742.18.1e-22100.00Ycf1 protein [Citrullus ecirrhosus][more]
YP_009431615.18.1e-22100.00Ycf1 [Citrullus amarus] >APW82521.1 Ycf1 [Citrullus lanatus subsp. vulgaris] >AS... [more]
YP_009326048.18.1e-22100.00Ycf1 [Citrullus lanatus] >YP_009348090.1 Ycf1 [Citrullus mucosospermus] >APW8294... [more]
APW82691.18.1e-22100.00Ycf1 [Citrullus lanatus subsp. vulgaris][more]
BLAST of CmUC04G079050 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q0ZIW07.1e-2190.63Protein TIC 214 OS=Vitis vinifera OX=29760 GN=TIC214 PE=3 SV=1[more]
Q06GT86.0e-2092.19Protein TIC 214 OS=Drimys granadensis OX=224735 GN=TIC214 PE=3 SV=1[more]
A6MM952.3e-1987.50Protein TIC 214 OS=Buxus microphylla OX=153571 GN=TIC214 PE=3 SV=1[more]
Q49KU02.3e-1989.06Protein TIC 214 OS=Eucalyptus globulus subsp. globulus OX=71271 GN=TIC214 PE=3 S... [more]
Q0G9G15.1e-1990.63Protein TIC 214 OS=Liriodendron tulipifera OX=3415 GN=TIC214 PE=3 SV=1[more]
BLAST of CmUC04G079050 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1P8LE533.9e-22100.00Ycf1 OS=Citrullus mucosospermus OX=519315 GN=ycf1 PE=4 SV=1[more]
A0A1P8LFC33.9e-22100.00Ycf1 OS=Citrullus lanatus subsp. vulgaris OX=260674 GN=ycf1 PE=4 SV=1[more]
A0A343A8H03.9e-22100.00Protein TIC 214 OS=Citrullus lanatus OX=3654 GN=ycf1 PE=3 SV=1[more]
A0A249RXF83.9e-22100.00Protein TIC 214 OS=Citrullus rehmii OX=260675 GN=ycf1 PE=3 SV=1[more]
A0A249RX643.9e-22100.00Protein TIC 214 OS=Citrullus amarus OX=1567104 GN=ycf1 PE=3 SV=1[more]
BLAST of CmUC04G079050 vs. TAIR 10
Match NameE-valueIdentityDescription
ATCG01130.11.6e-0452.38Ycf1 protein [more]
ATCG01000.11.6e-0452.38Ycf1 protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008896Protein TIC214PFAMPF05758Ycf1coord: 119..183
e-value: 6.2E-23
score: 80.7
IPR008896Protein TIC214PANTHERPTHR33163PROTEIN TIC 214-RELATEDcoord: 120..183
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 103..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 104..124
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..178
NoneNo IPR availablePANTHERPTHR33163:SF13PROTEIN TIC 214-RELATEDcoord: 120..183

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC04G079050.1CmUC04G079050.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015031 protein transport
cellular_component GO:0009706 chloroplast inner membrane
cellular_component GO:0016021 integral component of membrane