CmUC04G073570 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC04G073570
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	protein RETICULATA-RELATED 3, chloroplastic
Location	CmU531Chr04: 19556517 .. 19557623 (+)
RNA-Seq Expression	CmUC04G073570
Synteny	CmUC04G073570

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCTATGGCTCAGCTGCATTGTTCTGTTCGCCCTAGACATTACTGTAATATTCCAAATAATCATGCTTACAACAACACTCCGGCTTTCTCTTTTTTGTCTAATTCATCGGTTGTTGAATCGAGGACTCCATCTCTTTCTCTTTTTAATGCGGATTTAACTAGGCCTAGTTTTCTTGCGAAATCTGAGCTTTCTCTGGCTGGAGGCGACGGTGGTAACGGCGTTGGCCATGGCGGAAGAGGTGGGGGAGGTGGTGGTGATGGTGGTTGGAGTGATGATCGAACTCATGGGGATGATGATAATTCATCAAGTTTTGGAGTGTTGGGATTGTTTCTTAAAGGGTGGAGATCTAGAGTTGCTGCAGATCCACAGTTTCCTTTCAAGGTTCTGATGGAAGAATTGGTTGGTGTGAGTTCTTGTGTTCTTGGAGACATGGCGTCCCGTCCCAACTTCGGTCTCAACGAGCTCGACTTCGTCTTCTCCACCCTCGTCGTCGGATCGATACTGAATTTCACTCTCATGTATCTATTGGCTCCCACTGCAGCAGCTGGTGCAGCAGCCAAGCAGCTACCTGCAATCTTTGCGAGTTGCCCAACTAGTCATATGTTCGAACCCGGTGCATTCACAATCTTAGATCGATTGGGAACCTTTGTTTACAAGGGAACCGTCTTTGCCGCAGTTGGACTAGCCGCCGGGATCGTCGGGACTGCGCTCTCGAATGGCTTGATCAAGCTAAGGAAGAAGATGGATCCTGGATTCGAGACACCGAACAAGGCGCCTCCTACATTGTTGAATGCCATGACTTGGGCCATTCACATGGGGGTCAGTAGTAACTTGAGATATCAAACTTTGAATGGGGTTGAATATGTGTTGGCCAAGGGGCTTCCTCCTCTGGCATTCAAGAGCTCTGTGGTGGTGTTGAGATGTCTGAACAACGTTCTCGGGGGCATGTCGTTTGTCGTCCTCGCACGGTTGACAGGTTCGCAAAGCGTCGAGGGGCCGAAGCCAGCAGCAGTGGAGTTGGATTCTGGTGATGAGAAAGAGAAGCTGTTGGAGGGAGATAAAGAAGAGGAGTTAAGGAGCAACCAGGCAGCTTGCAAGTGA

mRNA sequence

ATGGCGGCTATGGCTCAGCTGCATTGTTCTGTTCGCCCTAGACATTACTGTAATATTCCAAATAATCATGCTTACAACAACACTCCGGCTTTCTCTTTTTTGTCTAATTCATCGGTTGTTGAATCGAGGACTCCATCTCTTTCTCTTTTTAATGCGGATTTAACTAGGCCTAGTTTTCTTGCGAAATCTGAGCTTTCTCTGGCTGGAGGCGACGGTGGTAACGGCGTTGGCCATGGCGGAAGAGGTGGGGGAGGTGGTGGTGATGGTGGTTGGAGTGATGATCGAACTCATGGGGATGATGATAATTCATCAAGTTTTGGAGTGTTGGGATTGTTTCTTAAAGGGTGGAGATCTAGAGTTGCTGCAGATCCACAGTTTCCTTTCAAGGTTCTGATGGAAGAATTGGTTGGTGTGAGTTCTTGTGTTCTTGGAGACATGGCGTCCCGTCCCAACTTCGGTCTCAACGAGCTCGACTTCGTCTTCTCCACCCTCGTCGTCGGATCGATACTGAATTTCACTCTCATGTATCTATTGGCTCCCACTGCAGCAGCTGGTGCAGCAGCCAAGCAGCTACCTGCAATCTTTGCGAGTTGCCCAACTAGTCATATGTTCGAACCCGGTGCATTCACAATCTTAGATCGATTGGGAACCTTTGTTTACAAGGGAACCGTCTTTGCCGCAGTTGGACTAGCCGCCGGGATCGTCGGGACTGCGCTCTCGAATGGCTTGATCAAGCTAAGGAAGAAGATGGATCCTGGATTCGAGACACCGAACAAGGCGCCTCCTACATTGTTGAATGCCATGACTTGGGCCATTCACATGGGGGTCAGTAGTAACTTGAGATATCAAACTTTGAATGGGGTTGAATATGTGTTGGCCAAGGGGCTTCCTCCTCTGGCATTCAAGAGCTCTGTGGTGGTGTTGAGATGTCTGAACAACGTTCTCGGGGGCATGTCGTTTGTCGTCCTCGCACGGTTGACAGGTTCGCAAAGCGTCGAGGGGCCGAAGCCAGCAGCAGTGGAGTTGGATTCTGGTGATGAGAAAGAGAAGCTGTTGGAGGGAGATAAAGAAGAGGAGTTAAGGAGCAACCAGGCAGCTTGCAAGTGA

Coding sequence (CDS)

ATGGCGGCTATGGCTCAGCTGCATTGTTCTGTTCGCCCTAGACATTACTGTAATATTCCAAATAATCATGCTTACAACAACACTCCGGCTTTCTCTTTTTTGTCTAATTCATCGGTTGTTGAATCGAGGACTCCATCTCTTTCTCTTTTTAATGCGGATTTAACTAGGCCTAGTTTTCTTGCGAAATCTGAGCTTTCTCTGGCTGGAGGCGACGGTGGTAACGGCGTTGGCCATGGCGGAAGAGGTGGGGGAGGTGGTGGTGATGGTGGTTGGAGTGATGATCGAACTCATGGGGATGATGATAATTCATCAAGTTTTGGAGTGTTGGGATTGTTTCTTAAAGGGTGGAGATCTAGAGTTGCTGCAGATCCACAGTTTCCTTTCAAGGTTCTGATGGAAGAATTGGTTGGTGTGAGTTCTTGTGTTCTTGGAGACATGGCGTCCCGTCCCAACTTCGGTCTCAACGAGCTCGACTTCGTCTTCTCCACCCTCGTCGTCGGATCGATACTGAATTTCACTCTCATGTATCTATTGGCTCCCACTGCAGCAGCTGGTGCAGCAGCCAAGCAGCTACCTGCAATCTTTGCGAGTTGCCCAACTAGTCATATGTTCGAACCCGGTGCATTCACAATCTTAGATCGATTGGGAACCTTTGTTTACAAGGGAACCGTCTTTGCCGCAGTTGGACTAGCCGCCGGGATCGTCGGGACTGCGCTCTCGAATGGCTTGATCAAGCTAAGGAAGAAGATGGATCCTGGATTCGAGACACCGAACAAGGCGCCTCCTACATTGTTGAATGCCATGACTTGGGCCATTCACATGGGGGTCAGTAGTAACTTGAGATATCAAACTTTGAATGGGGTTGAATATGTGTTGGCCAAGGGGCTTCCTCCTCTGGCATTCAAGAGCTCTGTGGTGGTGTTGAGATGTCTGAACAACGTTCTCGGGGGCATGTCGTTTGTCGTCCTCGCACGGTTGACAGGTTCGCAAAGCGTCGAGGGGCCGAAGCCAGCAGCAGTGGAGTTGGATTCTGGTGATGAGAAAGAGAAGCTGTTGGAGGGAGATAAAGAAGAGGAGTTAAGGAGCAACCAGGCAGCTTGCAAGTGA

Protein sequence

MAAMAQLHCSVRPRHYCNIPNNHAYNNTPAFSFLSNSSVVESRTPSLSLFNADLTRPSFLAKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWRSRVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFVYKGTVFAAVGLAAGIVGTALSNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPPLAFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEKLLEGDKEEELRSNQAACK

Homology

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BLAST of CmUC04G073570 vs. NCBI nr
Match: XP_038883563.1 (protein RETICULATA-RELATED 3, chloroplastic [Benincasa hispida])

HSP 1 Score: 677.9 bits (1748), Expect = 4.8e-191
Identity = 350/368 (95.11%), Postives = 361/368 (98.10%), Query Frame = 0


Query: 1   MAAMAQLHCSVRPRHYCNIPNNHAYNNTPAFSFLSNSSVVESRTPSLSLFNADLTRPSFL 60
           MAAMAQLHCSVRPRH+ N+PNN AYN+TPAFSFLSNSSVVESR+ SLS FNADLTRPSFL
Sbjct: 1   MAAMAQLHCSVRPRHHYNVPNNPAYNSTPAFSFLSNSSVVESRSRSLSFFNADLTRPSFL 60

Query: 61  AKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWRSRV 120
           AKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDD++SSSFGVLGLFLKGWRSRV
Sbjct: 61  AKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDNDSSSFGVLGLFLKGWRSRV 120

Query: 121 AADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 180
           AADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP
Sbjct: 121 AADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAP 180

Query: 181 TAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFVYKGTVFAAVGLAAGIVGTALS 240
           TAAAGAAAKQLPAIFASCPTSHMFEPGAFT+LDRLGTFVYKGTVFAAVGLAAG+VGTALS
Sbjct: 181 TAAAGAAAKQLPAIFASCPTSHMFEPGAFTLLDRLGTFVYKGTVFAAVGLAAGLVGTALS 240

Query: 241 NGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPPLA 300
           NGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVE++LAKGLPPLA
Sbjct: 241 NGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEFLLAKGLPPLA 300

Query: 301 FKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEKLLEGDKEEEL 360
           FKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKPA +ELDSGDEKEKLLEGDKEEEL
Sbjct: 301 FKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKPAVMELDSGDEKEKLLEGDKEEEL 360

Query: 361 RSNQAACK 369
           R NQ ACK
Sbjct: 361 RGNQTACK 368

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BLAST of CmUC04G073570 vs. NCBI nr
Match: XP_008463291.1 (PREDICTED: protein RETICULATA-RELATED 3, chloroplastic [Cucumis melo] >XP_016903009.1 PREDICTED: protein RETICULATA-RELATED 3, chloroplastic [Cucumis melo] >TYK06219.1 protein RETICULATA-RELATED 3 [Cucumis melo var. makuwa])

HSP 1 Score: 669.5 bits (1726), Expect = 1.7e-188
Identity = 349/370 (94.32%), Postives = 358/370 (96.76%), Query Frame = 0


Query: 1   MAAMAQLHCSVRPRHYCNIPNNHAYNNTPAFSFLSNSSVVESRTP--SLSLFNADLTRPS 60
           MAAMAQLHCSVRPR Y N+PNNH +NNTPAFSFLSNSSVVESR+   SLSLFNADLTR S
Sbjct: 1   MAAMAQLHCSVRPRQYYNVPNNHGFNNTPAFSFLSNSSVVESRSRSLSLSLFNADLTRRS 60

Query: 61  FLAKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWRS 120
           +LAKSELSLAGGDGGNGVGHGG+GGGGGGDGGWSDDRTHGDDD+SSSFGVLGLFLKGWRS
Sbjct: 61  YLAKSELSLAGGDGGNGVGHGGKGGGGGGDGGWSDDRTHGDDDDSSSFGVLGLFLKGWRS 120

Query: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180
           RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL
Sbjct: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180

Query: 181 APTAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFVYKGTVFAAVGLAAGIVGTA 240
           APTAAAGA AKQLP+IFASCPTSHMFEPGAFT+LDRLGTFVYKGTVFAAVGLAAG+VGTA
Sbjct: 181 APTAAAGAVAKQLPSIFASCPTSHMFEPGAFTLLDRLGTFVYKGTVFAAVGLAAGLVGTA 240

Query: 241 LSNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300
           LSNGLI LRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP
Sbjct: 241 LSNGLIMLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300

Query: 301 LAFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEKLLEGDKEE 360
           LAFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPK A VELDSGDEKEKLLEGDKEE
Sbjct: 301 LAFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKTAGVELDSGDEKEKLLEGDKEE 360

Query: 361 ELRSNQAACK 369
           ELRSNQ ACK
Sbjct: 361 ELRSNQTACK 370

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BLAST of CmUC04G073570 vs. NCBI nr
Match: XP_004142670.1 (protein RETICULATA-RELATED 3, chloroplastic [Cucumis sativus] >KGN54469.1 hypothetical protein Csa_012048 [Cucumis sativus])

HSP 1 Score: 666.8 bits (1719), Expect = 1.1e-187
Identity = 346/370 (93.51%), Postives = 358/370 (96.76%), Query Frame = 0


Query: 1   MAAMAQLHCSVRPRHYCNIPNNHAYNNTPAFSFLSNSSVVESRTP--SLSLFNADLTRPS 60
           MAAMAQLHCSVRPR Y ++PNNH +NNTPAFSFLSNSS VESR+   SLSLFNADLTRPS
Sbjct: 1   MAAMAQLHCSVRPRQYYSVPNNHGFNNTPAFSFLSNSSAVESRSRSLSLSLFNADLTRPS 60

Query: 61  FLAKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWRS 120
           FLAKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDD+SSSFGVLGLFLKGWRS
Sbjct: 61  FLAKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDDSSSFGVLGLFLKGWRS 120

Query: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180
           RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL
Sbjct: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180

Query: 181 APTAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFVYKGTVFAAVGLAAGIVGTA 240
           APTAAAG AA++LP+IFASCPTSHMFEPGAFT+LDR+GTFVYKGTVFAAVGLAAG+VGTA
Sbjct: 181 APTAAAGVAAQRLPSIFASCPTSHMFEPGAFTLLDRVGTFVYKGTVFAAVGLAAGLVGTA 240

Query: 241 LSNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300
           LSNGLI LRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP
Sbjct: 241 LSNGLIMLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300

Query: 301 LAFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEKLLEGDKEE 360
           LAFKSSVVVLRCLNNVLGGMSFVVLAR+TGSQSVEGPK A VELDSGDEKEKLLEGDKEE
Sbjct: 301 LAFKSSVVVLRCLNNVLGGMSFVVLARMTGSQSVEGPKTAGVELDSGDEKEKLLEGDKEE 360

Query: 361 ELRSNQAACK 369
           ELRSNQ ACK
Sbjct: 361 ELRSNQTACK 370

[Close]

BLAST of CmUC04G073570 vs. NCBI nr
Match: XP_022156248.1 (protein RETICULATA-RELATED 3, chloroplastic [Momordica charantia])

HSP 1 Score: 622.9 bits (1605), Expect = 1.8e-174
Identity = 326/362 (90.06%), Postives = 345/362 (95.30%), Query Frame = 0


Query: 1   MAAMAQLHCSVRPRHYCNIPNNHAYNNTPAFSFLSNSSVVESRTPSLSLFNADLTRPSFL 60
           MAAMAQLHCS+RPR+Y N+P NHAYNNTPAFSFLS+SSV++SRT SLSLF+ DLTRPSFL
Sbjct: 1   MAAMAQLHCSLRPRNYYNVPCNHAYNNTPAFSFLSDSSVIQSRTRSLSLFHTDLTRPSFL 60

Query: 61  AKSELSLA-GGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWRSR 120
           AKSELSLA GGDGG+GVG GG GGGGG  GGWSDDR HGDDD SSSFGVLGLFLKGWRSR
Sbjct: 61  AKSELSLAGGGDGGDGVGRGGGGGGGGDSGGWSDDRAHGDDD-SSSFGVLGLFLKGWRSR 120

Query: 121 VAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA 180
           VAADPQFPFKVLMEELVGVS+CVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA
Sbjct: 121 VAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA 180

Query: 181 PTAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFVYKGTVFAAVGLAAGIVGTAL 240
           PTAAAG AAKQLPAIF+SCPTSHMFEPGAFT+LDRLGTFVYKGTVFAAVGLAAG+VGTAL
Sbjct: 181 PTAAAGVAAKQLPAIFSSCPTSHMFEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTAL 240

Query: 241 SNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPPL 300
           SNGLIKLRKKMDP FETPNKAPPTLLNA+TWAIHMGVSSNLRYQTLNGVE+VLAKGLPPL
Sbjct: 241 SNGLIKLRKKMDPEFETPNKAPPTLLNALTWAIHMGVSSNLRYQTLNGVEFVLAKGLPPL 300

Query: 301 AFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEKLLEGDKEEE 360
           AFKSSVVVLRCLNNVLGG+SFV+LAR TGSQS+E PK AAVELDS DEKEKLLEGDK+EE
Sbjct: 301 AFKSSVVVLRCLNNVLGGVSFVILARATGSQSIEQPKAAAVELDSADEKEKLLEGDKDEE 360

Query: 361 LR 362
           L+
Sbjct: 361 LK 361

[Close]

BLAST of CmUC04G073570 vs. NCBI nr
Match: XP_022966374.1 (protein RETICULATA-RELATED 3, chloroplastic [Cucurbita maxima])

HSP 1 Score: 602.1 bits (1551), Expect = 3.3e-168
Identity = 314/362 (86.74%), Postives = 338/362 (93.37%), Query Frame = 0


Query: 1   MAAMAQLHCSVRPRHYCNIPNNHAYNNTPAFSFLSNSSVVESRTPSLSLFNADLTRPSFL 60
           MA+MAQLHCSVRPR+Y N+P++HAYNN PAFSFLSNSS VESR+ SLSLFNADLTR  FL
Sbjct: 1   MASMAQLHCSVRPRNYYNVPSSHAYNNPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFL 60

Query: 61  AKSELSLAGGDGGNGVGHGGRGGGGGGD-GGWSDDRTHGDDDNSSSFGVLGLFLKGWRSR 120
            KSELSLAGGDGGNGVG GG GGGGGGD GGWSDDR  GDD  SSSFGV GLFL+GWR+R
Sbjct: 61  VKSELSLAGGDGGNGVGRGGGGGGGGGDNGGWSDDRADGDD--SSSFGVFGLFLQGWRTR 120

Query: 121 VAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA 180
           VAADPQFPFKVLMEELVGVS+CVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA
Sbjct: 121 VAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA 180

Query: 181 PTAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFVYKGTVFAAVGLAAGIVGTAL 240
           PTA+AG AAKQLPAIF SCPTSHMFEPGAFT+L+RLGT VYKGTVFA VGLAAG+VGTAL
Sbjct: 181 PTASAGVAAKQLPAIFGSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTAL 240

Query: 241 SNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPPL 300
           SNGLIKLRKKMDP FETPNKAPPTLLNAMTWAIHMGVSSNLRYQ+LNG+E+VLAKGLPPL
Sbjct: 241 SNGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPL 300

Query: 301 AFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEKLLEGDKEEE 360
           AFKSSVVVLRCLNN+LGGMSFV+LAR+TGSQSVE  KPAA++LD+ D KEKLLEGDK+EE
Sbjct: 301 AFKSSVVVLRCLNNILGGMSFVILARMTGSQSVEDAKPAALDLDATDTKEKLLEGDKDEE 360

Query: 361 LR 362
           L+
Sbjct: 361 LK 360

[Close]

BLAST of CmUC04G073570 vs. ExPASy Swiss-Prot
Match: Q9C9Z2 (Protein RETICULATA-RELATED 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER3 PE=1 SV=1)

HSP 1 Score: 374.4 bits (960), Expect = 1.5e-102
Identity = 201/312 (64.42%), Postives = 239/312 (76.60%), Query Frame = 0


Query: 22  NHAYNNTPAFSFLSNSSVVESRTPSLSLFNADLTRPSFLAKSELSLAGGDGGNGVGHGGR 81
           N + + T   SF  N SV    T   +  +  L +P          AGG GG   G+ G 
Sbjct: 26  NLSRDPTTRVSFPRNGSVCSLHT---NFSSPHLAKP---------CAGGGGGGSTGNNGG 85

Query: 82  GGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWRSRVAADPQFPFKVLMEELVGVSSC 141
           G G GG GG          + SS +G +GLF++GWRSRVAADPQFPFKVLMEE+VG+S+C
Sbjct: 86  GSGSGGGGGGFGGSGGEASEESSPWGPIGLFIQGWRSRVAADPQFPFKVLMEEIVGLSAC 145

Query: 142 VLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTAAAGAAAKQLPAIFASCPTS 201
           VLGDMASRPNFGLNELDFVFSTLVVGSILNF LMY+LAPTAA   +++ LP IF +CP+S
Sbjct: 146 VLGDMASRPNFGLNELDFVFSTLVVGSILNFVLMYMLAPTAATLGSSQTLPGIFRNCPSS 205

Query: 202 HMFEPGAFTILDRLGTFVYKGTVFAAVGLAAGIVGTALSNGLIKLRKKMDPGFETPNKAP 261
           HMFE G+FT+++R GT VYKG VFA+VGLAAG+VGTA+SNGLI LRKKMDP FETPNK P
Sbjct: 206 HMFEQGSFTVMNRFGTLVYKGMVFASVGLAAGLVGTAISNGLIMLRKKMDPSFETPNKPP 265

Query: 262 PTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPPLAFKSSVVVLRCLNNVLGGMSFV 321
           PT+LN++TWA HMGVS+N RYQTLNG+E++LAK LPPL FK+SV+VLRC NNV GGMSFV
Sbjct: 266 PTVLNSLTWATHMGVSANARYQTLNGIEFLLAKVLPPLVFKTSVIVLRCANNVAGGMSFV 325

Query: 322 VLARLTGSQSVE 334
           +LAR+TGSQSVE
Sbjct: 326 LLARMTGSQSVE 325

[Close]

BLAST of CmUC04G073570 vs. ExPASy Swiss-Prot
Match: Q9C9Z3 (Protein RETICULATA-RELATED 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER2 PE=2 SV=1)

HSP 1 Score: 369.8 bits (948), Expect = 3.6e-101
Identity = 213/353 (60.34%), Postives = 259/353 (73.37%), Query Frame = 0


Query: 1   MAAM-AQLHCSVR-PRHYCNIPNNHAYNNTPAFSFLSNSSVVESRTPSLSLFNADLTRPS 60
           MAAM A+LH S +  +    +P     +  P       + V+  R  S+S  + + + P+
Sbjct: 1   MAAMAAKLHISTKSDQSNVRLPRLINLSRDP------TARVLFPRNGSVSSLHTNFSSPN 60

Query: 61  FLAKSELSLAGGDGGNGVG-HGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWR 120
            +    +  AGG GG  +G HGG  G GGG GG+       +++ SS +G LGLF++GWR
Sbjct: 61  IM----VPCAGGGGGGSIGNHGGGSGSGGGGGGYGG----SEEEESSPWGPLGLFIQGWR 120

Query: 121 SRVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYL 180
           SRVAAD QFPFKVLME LVGVS+ VLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYL
Sbjct: 121 SRVAADSQFPFKVLMEMLVGVSANVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYL 180

Query: 181 LAPTAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFVYKGTVFAAVGLAAGIVGT 240
           LAP+A +  ++  LP IF SCP+SHMFE G FT+++R GT VYKG VFA VGLAAG+VGT
Sbjct: 181 LAPSAISHGSSNLLPGIFRSCPSSHMFEQGNFTLMNRFGTLVYKGMVFATVGLAAGLVGT 240

Query: 241 ALSNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLP 300
           A+SNGLI LRKK+DP FETPNK PPTLLN++TWA HMGVS+N+RYQTLNG E++L K LP
Sbjct: 241 AISNGLIMLRKKIDPSFETPNKPPPTLLNSLTWATHMGVSANVRYQTLNGAEFLLEKSLP 300

Query: 301 PLAFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEK 351
           PL FK+SV+ LR +NNVLGGMSFV LAR+TGSQSVE  K   +E+    EKEK
Sbjct: 301 PLVFKTSVIALRVVNNVLGGMSFVTLARMTGSQSVEEEK--KIEMSEISEKEK 337

[Close]

BLAST of CmUC04G073570 vs. ExPASy Swiss-Prot
Match: B9DFK5 (Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 8.9e-23
Identity = 99/320 (30.94%), Postives = 152/320 (47.50%), Query Frame = 0


Query: 69  GGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDD---------------------------- 128
           G DG  G G GG GG G G+G   +++  G                              
Sbjct: 117 GSDGNGGGGGGGNGGEGDGEGEDYEEKEFGPILKFEEVMKETEARGATLPSDMLEAAKNY 176

Query: 129 -----------DNSSSFGVLGLFLKGW---RSRVAADPQFPFKVLMEELVGVSSCVLGDM 188
                      D  SS G+LG  ++ W   R+R+ ADP F FK+  E ++      + ++
Sbjct: 177 GIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCATVAEV 236

Query: 189 ASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA-------PTAAAGAAAKQLPAIFASCP 248
             R      E +   + L+VG+++N  L+ +LA       P+A+ G   + + A + + P
Sbjct: 237 QKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFA-YNALP 296

Query: 249 TSHMFE---PGA-FTILDRLGTFVYKGTVFAAVGLAAGIVGTALSNGLIKLRKKMDPGFE 308
           +S +FE   PG  F+   RL T+ YKG ++ AVG   GIVG  ++N ++  ++ ++   E
Sbjct: 297 SS-VFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKRNINKS-E 356

Query: 309 TPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVL-----AKGLPPLAFKSSVVVLRC 331
                PP + +A  W + + VSSN RYQ +NG+E V+     AK  PP A   +V V R 
Sbjct: 357 ENIPVPPLIKSAALWGVFLSVSSNTRYQIINGLERVVEASPFAKKFPPAAMAFTVGV-RL 416

[Close]

BLAST of CmUC04G073570 vs. ExPASy Swiss-Prot
Match: Q9FGP9 (Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER1 PE=1 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.2e-21
Identity = 102/324 (31.48%), Postives = 148/324 (45.68%), Query Frame = 0


Query: 69  GGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDD--------------------------DN 128
           GG+GGNG G GG G G G DG    D+    +                          + 
Sbjct: 113 GGNGGNGDGGGGGGDGEGDDGEDEADKAEEKEFGPILKFEEVMKETERRGITLPEDMLEA 172

Query: 129 SSSFGVLGLFLKGW--------------------RSRVAADPQFPFKVLMEELVGVSSCV 188
           + S G+  LFL  +                    R+R+ ADP F FKV  E  +      
Sbjct: 173 AKSVGIRKLFLLRYLDLQGSVWPLGFLMRSCAMLRNRMLADPSFLFKVGTEVAIDSCCAT 232

Query: 189 LGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTAAAGAAA-------KQLPAIF 248
             ++  R     +E +   + L+VG +++  L+ LLAP A  G  +       K L    
Sbjct: 233 FAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLLAPYARIGKPSVASTGLFKDLKRAC 292

Query: 249 ASCPTSHMFE---PGA-FTILDRLGTFVYKGTVFAAVGLAAGIVGTALSNGLIKLRKKMD 308
           AS P+S +FE   PG  F++  R+ TF YKG ++ +VG   G++G  ++N LI   K+  
Sbjct: 293 ASLPSS-VFEAERPGCKFSVNQRIATFFYKGLLYGSVGFGCGLIGQGIAN-LIMTAKRSV 352

Query: 309 PGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVL-----AKGLPPLAFKSSVV 331
              E     PP   +A  W + +G+SSN RYQ +NG+E V+     AK +P +A   +V 
Sbjct: 353 KKSEEDVPIPPLFESAALWGVFLGLSSNARYQIINGLERVVEGSTAAKRIPVVAMAFTVG 412

[Close]

BLAST of CmUC04G073570 vs. ExPASy Swiss-Prot
Match: Q94CJ5 (Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RER4 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 2.2e-21
Identity = 99/326 (30.37%), Postives = 143/326 (43.87%), Query Frame = 0


Query: 65  LSLAGGDGGNGVGHGG-RGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLK--------- 124
           LS + G+GG+    GG  GGGGGGDGG +D   HGD+D   +     L LK         
Sbjct: 60  LSASSGNGGSDNNGGGLSGGGGGGDGGKNDGDGHGDEDRDRNRNEAMLLLKESGIELESL 119

Query: 125 -------------------------------------GWRSRVAADPQFPFKVLMEELVG 184
                                                G+R R+ AD  F  K+ ME  VG
Sbjct: 120 PKDLAAAIEAGRIPGSVITRFLELQKSAVMRWLMQFGGFRERLLADDLFMAKLAMECGVG 179

Query: 185 VSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTAA----AGAAAKQLPA 244
           + +    +   R     NEL+ VF+ + +  I +F L+YL APT +        A  +  
Sbjct: 180 IFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVYLPAPTVSLRPPLALTAGGISK 239

Query: 245 IFASCPTSHM---FEPGAFTILDRLGTFVYKGTVFAAVGLAAGIVGTALSNGLIKLRKKM 304
            F +CP +         ++T+L RLG     G    AVG  + +VGTA++N  IK RK +
Sbjct: 240 FFHNCPDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVGTTSSLVGTAITNAFIKARKAV 299

Query: 305 DPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP------LAFKSS 331
           D   E   +  P +  ++ + ++M VSSNLRYQ + GV  +  + L P      LA  + 
Sbjct: 300 DQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGV--IEQRLLEPMLHQHKLALSAL 359

[Close]

BLAST of CmUC04G073570 vs. ExPASy TrEMBL
Match: A0A1S3CIX7 (protein RETICULATA-RELATED 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501484 PE=3 SV=1)

HSP 1 Score: 669.5 bits (1726), Expect = 8.2e-189
Identity = 349/370 (94.32%), Postives = 358/370 (96.76%), Query Frame = 0


Query: 1   MAAMAQLHCSVRPRHYCNIPNNHAYNNTPAFSFLSNSSVVESRTP--SLSLFNADLTRPS 60
           MAAMAQLHCSVRPR Y N+PNNH +NNTPAFSFLSNSSVVESR+   SLSLFNADLTR S
Sbjct: 1   MAAMAQLHCSVRPRQYYNVPNNHGFNNTPAFSFLSNSSVVESRSRSLSLSLFNADLTRRS 60

Query: 61  FLAKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWRS 120
           +LAKSELSLAGGDGGNGVGHGG+GGGGGGDGGWSDDRTHGDDD+SSSFGVLGLFLKGWRS
Sbjct: 61  YLAKSELSLAGGDGGNGVGHGGKGGGGGGDGGWSDDRTHGDDDDSSSFGVLGLFLKGWRS 120

Query: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180
           RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL
Sbjct: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180

Query: 181 APTAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFVYKGTVFAAVGLAAGIVGTA 240
           APTAAAGA AKQLP+IFASCPTSHMFEPGAFT+LDRLGTFVYKGTVFAAVGLAAG+VGTA
Sbjct: 181 APTAAAGAVAKQLPSIFASCPTSHMFEPGAFTLLDRLGTFVYKGTVFAAVGLAAGLVGTA 240

Query: 241 LSNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300
           LSNGLI LRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP
Sbjct: 241 LSNGLIMLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300

Query: 301 LAFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEKLLEGDKEE 360
           LAFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPK A VELDSGDEKEKLLEGDKEE
Sbjct: 301 LAFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKTAGVELDSGDEKEKLLEGDKEE 360

Query: 361 ELRSNQAACK 369
           ELRSNQ ACK
Sbjct: 361 ELRSNQTACK 370

[Close]

BLAST of CmUC04G073570 vs. ExPASy TrEMBL
Match: A0A5D3C7A3 (Protein RETICULATA-RELATED 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold287G00830 PE=3 SV=1)

HSP 1 Score: 669.5 bits (1726), Expect = 8.2e-189
Identity = 349/370 (94.32%), Postives = 358/370 (96.76%), Query Frame = 0


Query: 1   MAAMAQLHCSVRPRHYCNIPNNHAYNNTPAFSFLSNSSVVESRTP--SLSLFNADLTRPS 60
           MAAMAQLHCSVRPR Y N+PNNH +NNTPAFSFLSNSSVVESR+   SLSLFNADLTR S
Sbjct: 1   MAAMAQLHCSVRPRQYYNVPNNHGFNNTPAFSFLSNSSVVESRSRSLSLSLFNADLTRRS 60

Query: 61  FLAKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWRS 120
           +LAKSELSLAGGDGGNGVGHGG+GGGGGGDGGWSDDRTHGDDD+SSSFGVLGLFLKGWRS
Sbjct: 61  YLAKSELSLAGGDGGNGVGHGGKGGGGGGDGGWSDDRTHGDDDDSSSFGVLGLFLKGWRS 120

Query: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180
           RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL
Sbjct: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180

Query: 181 APTAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFVYKGTVFAAVGLAAGIVGTA 240
           APTAAAGA AKQLP+IFASCPTSHMFEPGAFT+LDRLGTFVYKGTVFAAVGLAAG+VGTA
Sbjct: 181 APTAAAGAVAKQLPSIFASCPTSHMFEPGAFTLLDRLGTFVYKGTVFAAVGLAAGLVGTA 240

Query: 241 LSNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300
           LSNGLI LRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP
Sbjct: 241 LSNGLIMLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300

Query: 301 LAFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEKLLEGDKEE 360
           LAFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPK A VELDSGDEKEKLLEGDKEE
Sbjct: 301 LAFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKTAGVELDSGDEKEKLLEGDKEE 360

Query: 361 ELRSNQAACK 369
           ELRSNQ ACK
Sbjct: 361 ELRSNQTACK 370

[Close]

BLAST of CmUC04G073570 vs. ExPASy TrEMBL
Match: A0A0A0L080 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G337260 PE=3 SV=1)

HSP 1 Score: 666.8 bits (1719), Expect = 5.3e-188
Identity = 346/370 (93.51%), Postives = 358/370 (96.76%), Query Frame = 0


Query: 1   MAAMAQLHCSVRPRHYCNIPNNHAYNNTPAFSFLSNSSVVESRTP--SLSLFNADLTRPS 60
           MAAMAQLHCSVRPR Y ++PNNH +NNTPAFSFLSNSS VESR+   SLSLFNADLTRPS
Sbjct: 1   MAAMAQLHCSVRPRQYYSVPNNHGFNNTPAFSFLSNSSAVESRSRSLSLSLFNADLTRPS 60

Query: 61  FLAKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWRS 120
           FLAKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDD+SSSFGVLGLFLKGWRS
Sbjct: 61  FLAKSELSLAGGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDDSSSFGVLGLFLKGWRS 120

Query: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180
           RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL
Sbjct: 121 RVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLL 180

Query: 181 APTAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFVYKGTVFAAVGLAAGIVGTA 240
           APTAAAG AA++LP+IFASCPTSHMFEPGAFT+LDR+GTFVYKGTVFAAVGLAAG+VGTA
Sbjct: 181 APTAAAGVAAQRLPSIFASCPTSHMFEPGAFTLLDRVGTFVYKGTVFAAVGLAAGLVGTA 240

Query: 241 LSNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300
           LSNGLI LRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP
Sbjct: 241 LSNGLIMLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP 300

Query: 301 LAFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEKLLEGDKEE 360
           LAFKSSVVVLRCLNNVLGGMSFVVLAR+TGSQSVEGPK A VELDSGDEKEKLLEGDKEE
Sbjct: 301 LAFKSSVVVLRCLNNVLGGMSFVVLARMTGSQSVEGPKTAGVELDSGDEKEKLLEGDKEE 360

Query: 361 ELRSNQAACK 369
           ELRSNQ ACK
Sbjct: 361 ELRSNQTACK 370

[Close]

BLAST of CmUC04G073570 vs. ExPASy TrEMBL
Match: A0A6J1DQ40 (protein RETICULATA-RELATED 3, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111023180 PE=3 SV=1)

HSP 1 Score: 622.9 bits (1605), Expect = 8.8e-175
Identity = 326/362 (90.06%), Postives = 345/362 (95.30%), Query Frame = 0


Query: 1   MAAMAQLHCSVRPRHYCNIPNNHAYNNTPAFSFLSNSSVVESRTPSLSLFNADLTRPSFL 60
           MAAMAQLHCS+RPR+Y N+P NHAYNNTPAFSFLS+SSV++SRT SLSLF+ DLTRPSFL
Sbjct: 1   MAAMAQLHCSLRPRNYYNVPCNHAYNNTPAFSFLSDSSVIQSRTRSLSLFHTDLTRPSFL 60

Query: 61  AKSELSLA-GGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWRSR 120
           AKSELSLA GGDGG+GVG GG GGGGG  GGWSDDR HGDDD SSSFGVLGLFLKGWRSR
Sbjct: 61  AKSELSLAGGGDGGDGVGRGGGGGGGGDSGGWSDDRAHGDDD-SSSFGVLGLFLKGWRSR 120

Query: 121 VAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA 180
           VAADPQFPFKVLMEELVGVS+CVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA
Sbjct: 121 VAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA 180

Query: 181 PTAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFVYKGTVFAAVGLAAGIVGTAL 240
           PTAAAG AAKQLPAIF+SCPTSHMFEPGAFT+LDRLGTFVYKGTVFAAVGLAAG+VGTAL
Sbjct: 181 PTAAAGVAAKQLPAIFSSCPTSHMFEPGAFTVLDRLGTFVYKGTVFAAVGLAAGLVGTAL 240

Query: 241 SNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPPL 300
           SNGLIKLRKKMDP FETPNKAPPTLLNA+TWAIHMGVSSNLRYQTLNGVE+VLAKGLPPL
Sbjct: 241 SNGLIKLRKKMDPEFETPNKAPPTLLNALTWAIHMGVSSNLRYQTLNGVEFVLAKGLPPL 300

Query: 301 AFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEKLLEGDKEEE 360
           AFKSSVVVLRCLNNVLGG+SFV+LAR TGSQS+E PK AAVELDS DEKEKLLEGDK+EE
Sbjct: 301 AFKSSVVVLRCLNNVLGGVSFVILARATGSQSIEQPKAAAVELDSADEKEKLLEGDKDEE 360

Query: 361 LR 362
           L+
Sbjct: 361 LK 361

[Close]

BLAST of CmUC04G073570 vs. ExPASy TrEMBL
Match: A0A6J1HTL4 (protein RETICULATA-RELATED 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466041 PE=3 SV=1)

HSP 1 Score: 602.1 bits (1551), Expect = 1.6e-168
Identity = 314/362 (86.74%), Postives = 338/362 (93.37%), Query Frame = 0


Query: 1   MAAMAQLHCSVRPRHYCNIPNNHAYNNTPAFSFLSNSSVVESRTPSLSLFNADLTRPSFL 60
           MA+MAQLHCSVRPR+Y N+P++HAYNN PAFSFLSNSS VESR+ SLSLFNADLTR  FL
Sbjct: 1   MASMAQLHCSVRPRNYYNVPSSHAYNNPPAFSFLSNSSAVESRSRSLSLFNADLTRSRFL 60

Query: 61  AKSELSLAGGDGGNGVGHGGRGGGGGGD-GGWSDDRTHGDDDNSSSFGVLGLFLKGWRSR 120
            KSELSLAGGDGGNGVG GG GGGGGGD GGWSDDR  GDD  SSSFGV GLFL+GWR+R
Sbjct: 61  VKSELSLAGGDGGNGVGRGGGGGGGGGDNGGWSDDRADGDD--SSSFGVFGLFLQGWRTR 120

Query: 121 VAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA 180
           VAADPQFPFKVLMEELVGVS+CVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA
Sbjct: 121 VAADPQFPFKVLMEELVGVSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA 180

Query: 181 PTAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFVYKGTVFAAVGLAAGIVGTAL 240
           PTA+AG AAKQLPAIF SCPTSHMFEPGAFT+L+RLGT VYKGTVFA VGLAAG+VGTAL
Sbjct: 181 PTASAGVAAKQLPAIFGSCPTSHMFEPGAFTVLERLGTLVYKGTVFATVGLAAGLVGTAL 240

Query: 241 SNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPPL 300
           SNGLIKLRKKMDP FETPNKAPPTLLNAMTWAIHMGVSSNLRYQ+LNG+E+VLAKGLPPL
Sbjct: 241 SNGLIKLRKKMDPEFETPNKAPPTLLNAMTWAIHMGVSSNLRYQSLNGLEFVLAKGLPPL 300

Query: 301 AFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEKLLEGDKEEE 360
           AFKSSVVVLRCLNN+LGGMSFV+LAR+TGSQSVE  KPAA++LD+ D KEKLLEGDK+EE
Sbjct: 301 AFKSSVVVLRCLNNILGGMSFVILARMTGSQSVEDAKPAALDLDATDTKEKLLEGDKDEE 360

Query: 361 LR 362
           L+
Sbjct: 361 LK 360

[Close]

BLAST of CmUC04G073570 vs. TAIR 10
Match: AT3G08640.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 374.4 bits (960), Expect = 1.0e-103
Identity = 201/312 (64.42%), Postives = 239/312 (76.60%), Query Frame = 0


Query: 22  NHAYNNTPAFSFLSNSSVVESRTPSLSLFNADLTRPSFLAKSELSLAGGDGGNGVGHGGR 81
           N + + T   SF  N SV    T   +  +  L +P          AGG GG   G+ G 
Sbjct: 26  NLSRDPTTRVSFPRNGSVCSLHT---NFSSPHLAKP---------CAGGGGGGSTGNNGG 85

Query: 82  GGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWRSRVAADPQFPFKVLMEELVGVSSC 141
           G G GG GG          + SS +G +GLF++GWRSRVAADPQFPFKVLMEE+VG+S+C
Sbjct: 86  GSGSGGGGGGFGGSGGEASEESSPWGPIGLFIQGWRSRVAADPQFPFKVLMEEIVGLSAC 145

Query: 142 VLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTAAAGAAAKQLPAIFASCPTS 201
           VLGDMASRPNFGLNELDFVFSTLVVGSILNF LMY+LAPTAA   +++ LP IF +CP+S
Sbjct: 146 VLGDMASRPNFGLNELDFVFSTLVVGSILNFVLMYMLAPTAATLGSSQTLPGIFRNCPSS 205

Query: 202 HMFEPGAFTILDRLGTFVYKGTVFAAVGLAAGIVGTALSNGLIKLRKKMDPGFETPNKAP 261
           HMFE G+FT+++R GT VYKG VFA+VGLAAG+VGTA+SNGLI LRKKMDP FETPNK P
Sbjct: 206 HMFEQGSFTVMNRFGTLVYKGMVFASVGLAAGLVGTAISNGLIMLRKKMDPSFETPNKPP 265

Query: 262 PTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPPLAFKSSVVVLRCLNNVLGGMSFV 321
           PT+LN++TWA HMGVS+N RYQTLNG+E++LAK LPPL FK+SV+VLRC NNV GGMSFV
Sbjct: 266 PTVLNSLTWATHMGVSANARYQTLNGIEFLLAKVLPPLVFKTSVIVLRCANNVAGGMSFV 325

Query: 322 VLARLTGSQSVE 334
           +LAR+TGSQSVE
Sbjct: 326 LLARMTGSQSVE 325

[Close]

BLAST of CmUC04G073570 vs. TAIR 10
Match: AT3G08630.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 369.8 bits (948), Expect = 2.6e-102
Identity = 213/353 (60.34%), Postives = 259/353 (73.37%), Query Frame = 0


Query: 1   MAAM-AQLHCSVR-PRHYCNIPNNHAYNNTPAFSFLSNSSVVESRTPSLSLFNADLTRPS 60
           MAAM A+LH S +  +    +P     +  P       + V+  R  S+S  + + + P+
Sbjct: 1   MAAMAAKLHISTKSDQSNVRLPRLINLSRDP------TARVLFPRNGSVSSLHTNFSSPN 60

Query: 61  FLAKSELSLAGGDGGNGVG-HGGRGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLKGWR 120
            +    +  AGG GG  +G HGG  G GGG GG+       +++ SS +G LGLF++GWR
Sbjct: 61  IM----VPCAGGGGGGSIGNHGGGSGSGGGGGGYGG----SEEEESSPWGPLGLFIQGWR 120

Query: 121 SRVAADPQFPFKVLMEELVGVSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYL 180
           SRVAAD QFPFKVLME LVGVS+ VLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYL
Sbjct: 121 SRVAADSQFPFKVLMEMLVGVSANVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYL 180

Query: 181 LAPTAAAGAAAKQLPAIFASCPTSHMFEPGAFTILDRLGTFVYKGTVFAAVGLAAGIVGT 240
           LAP+A +  ++  LP IF SCP+SHMFE G FT+++R GT VYKG VFA VGLAAG+VGT
Sbjct: 181 LAPSAISHGSSNLLPGIFRSCPSSHMFEQGNFTLMNRFGTLVYKGMVFATVGLAAGLVGT 240

Query: 241 ALSNGLIKLRKKMDPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLP 300
           A+SNGLI LRKK+DP FETPNK PPTLLN++TWA HMGVS+N+RYQTLNG E++L K LP
Sbjct: 241 AISNGLIMLRKKIDPSFETPNKPPPTLLNSLTWATHMGVSANVRYQTLNGAEFLLEKSLP 300

Query: 301 PLAFKSSVVVLRCLNNVLGGMSFVVLARLTGSQSVEGPKPAAVELDSGDEKEK 351
           PL FK+SV+ LR +NNVLGGMSFV LAR+TGSQSVE  K   +E+    EKEK
Sbjct: 301 PLVFKTSVIALRVVNNVLGGMSFVTLARMTGSQSVEEEK--KIEMSEISEKEK 337

[Close]

BLAST of CmUC04G073570 vs. TAIR 10
Match: AT2G37860.3 (Protein of unknown function (DUF3411) )

HSP 1 Score: 109.4 bits (272), Expect = 6.3e-24
Identity = 99/320 (30.94%), Postives = 152/320 (47.50%), Query Frame = 0


Query: 69  GGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDD---------------------------- 128
           G DG  G G GG GG G G+G   +++  G                              
Sbjct: 117 GSDGNGGGGGGGNGGEGDGEGEDYEEKEFGPILKFEEVMKETEARGATLPSDMLEAAKNY 176

Query: 129 -----------DNSSSFGVLGLFLKGW---RSRVAADPQFPFKVLMEELVGVSSCVLGDM 188
                      D  SS G+LG  ++ W   R+R+ ADP F FK+  E ++      + ++
Sbjct: 177 GIRKVLLLRYLDLQSSAGLLGFAIRSWAMLRNRMLADPSFLFKIGAEIVIDSCCATVAEV 236

Query: 189 ASRPNFGLNELDFVFSTLVVGSILNFTLMYLLA-------PTAAAGAAAKQLPAIFASCP 248
             R      E +   + L+VG+++N  L+ +LA       P+A+ G   + + A + + P
Sbjct: 237 QKRGKDFWAEFELYVADLLVGTVVNIALVGMLAPYVRFGQPSASPGFLGRMVFA-YNALP 296

Query: 249 TSHMFE---PGA-FTILDRLGTFVYKGTVFAAVGLAAGIVGTALSNGLIKLRKKMDPGFE 308
           +S +FE   PG  F+   RL T+ YKG ++ AVG   GIVG  ++N ++  ++ ++   E
Sbjct: 297 SS-VFEAERPGCRFSAQQRLATYFYKGIMYGAVGFGCGIVGQGIANLIMTAKRNINKS-E 356

Query: 309 TPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVL-----AKGLPPLAFKSSVVVLRC 331
                PP + +A  W + + VSSN RYQ +NG+E V+     AK  PP A   +V V R 
Sbjct: 357 ENIPVPPLIKSAALWGVFLSVSSNTRYQIINGLERVVEASPFAKKFPPAAMAFTVGV-RL 416

[Close]

BLAST of CmUC04G073570 vs. TAIR 10
Match: AT5G22790.1 (reticulata-related 1 )

HSP 1 Score: 104.8 bits (260), Expect = 1.6e-22
Identity = 102/324 (31.48%), Postives = 148/324 (45.68%), Query Frame = 0


Query: 69  GGDGGNGVGHGGRGGGGGGDGGWSDDRTHGDD--------------------------DN 128
           GG+GGNG G GG G G G DG    D+    +                          + 
Sbjct: 113 GGNGGNGDGGGGGGDGEGDDGEDEADKAEEKEFGPILKFEEVMKETERRGITLPEDMLEA 172

Query: 129 SSSFGVLGLFLKGW--------------------RSRVAADPQFPFKVLMEELVGVSSCV 188
           + S G+  LFL  +                    R+R+ ADP F FKV  E  +      
Sbjct: 173 AKSVGIRKLFLLRYLDLQGSVWPLGFLMRSCAMLRNRMLADPSFLFKVGTEVAIDSCCAT 232

Query: 189 LGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTAAAGAAA-------KQLPAIF 248
             ++  R     +E +   + L+VG +++  L+ LLAP A  G  +       K L    
Sbjct: 233 FAEVQKRGEDFWSEFELYAADLLVGLVVDVALVGLLAPYARIGKPSVASTGLFKDLKRAC 292

Query: 249 ASCPTSHMFE---PGA-FTILDRLGTFVYKGTVFAAVGLAAGIVGTALSNGLIKLRKKMD 308
           AS P+S +FE   PG  F++  R+ TF YKG ++ +VG   G++G  ++N LI   K+  
Sbjct: 293 ASLPSS-VFEAERPGCKFSVNQRIATFFYKGLLYGSVGFGCGLIGQGIAN-LIMTAKRSV 352

Query: 309 PGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVL-----AKGLPPLAFKSSVV 331
              E     PP   +A  W + +G+SSN RYQ +NG+E V+     AK +P +A   +V 
Sbjct: 353 KKSEEDVPIPPLFESAALWGVFLGLSSNARYQIINGLERVVEGSTAAKRIPVVAMAFTVG 412

[Close]

BLAST of CmUC04G073570 vs. TAIR 10
Match: AT5G12470.1 (Protein of unknown function (DUF3411) )

HSP 1 Score: 104.8 bits (260), Expect = 1.6e-22
Identity = 99/326 (30.37%), Postives = 143/326 (43.87%), Query Frame = 0


Query: 65  LSLAGGDGGNGVGHGG-RGGGGGGDGGWSDDRTHGDDDNSSSFGVLGLFLK--------- 124
           LS + G+GG+    GG  GGGGGGDGG +D   HGD+D   +     L LK         
Sbjct: 60  LSASSGNGGSDNNGGGLSGGGGGGDGGKNDGDGHGDEDRDRNRNEAMLLLKESGIELESL 119

Query: 125 -------------------------------------GWRSRVAADPQFPFKVLMEELVG 184
                                                G+R R+ AD  F  K+ ME  VG
Sbjct: 120 PKDLAAAIEAGRIPGSVITRFLELQKSAVMRWLMQFGGFRERLLADDLFMAKLAMECGVG 179

Query: 185 VSSCVLGDMASRPNFGLNELDFVFSTLVVGSILNFTLMYLLAPTAA----AGAAAKQLPA 244
           + +    +   R     NEL+ VF+ + +  I +F L+YL APT +        A  +  
Sbjct: 180 IFTKTAAEYERRRENFFNELEVVFADVAMAIIADFMLVYLPAPTVSLRPPLALTAGGISK 239

Query: 245 IFASCPTSHM---FEPGAFTILDRLGTFVYKGTVFAAVGLAAGIVGTALSNGLIKLRKKM 304
            F +CP +         ++T+L RLG     G    AVG  + +VGTA++N  IK RK +
Sbjct: 240 FFHNCPDNAFQVALSGTSYTLLQRLGAITRNGAKLFAVGTTSSLVGTAITNAFIKARKAV 299

Query: 305 DPGFETPNKAPPTLLNAMTWAIHMGVSSNLRYQTLNGVEYVLAKGLPP------LAFKSS 331
           D   E   +  P +  ++ + ++M VSSNLRYQ + GV  +  + L P      LA  + 
Sbjct: 300 DQNSEGEVETVPIVSTSVAYGVYMAVSSNLRYQIVAGV--IEQRLLEPMLHQHKLALSAL 359

The following BLAST results are available for this feature:

BLAST of CmUC04G073570 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038883563.1	4.8e-191	95.11	protein RETICULATA-RELATED 3, chloroplastic [Benincasa hispida]	[more]
XP_008463291.1	1.7e-188	94.32	PREDICTED: protein RETICULATA-RELATED 3, chloroplastic [Cucumis melo] >XP_016903...	[more]
XP_004142670.1	1.1e-187	93.51	protein RETICULATA-RELATED 3, chloroplastic [Cucumis sativus] >KGN54469.1 hypoth...	[more]
XP_022156248.1	1.8e-174	90.06	protein RETICULATA-RELATED 3, chloroplastic [Momordica charantia]	[more]
XP_022966374.1	3.3e-168	86.74	protein RETICULATA-RELATED 3, chloroplastic [Cucurbita maxima]	[more]

BLAST of CmUC04G073570 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C9Z2	1.5e-102	64.42	Protein RETICULATA-RELATED 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q9C9Z3	3.6e-101	60.34	Protein RETICULATA-RELATED 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
B9DFK5	8.9e-23	30.94	Protein RETICULATA, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RE PE=1 SV=...	[more]
Q9FGP9	2.2e-21	31.48	Protein RETICULATA-RELATED 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]
Q94CJ5	2.2e-21	30.37	Protein RETICULATA-RELATED 4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=R...	[more]

BLAST of CmUC04G073570 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CIX7	8.2e-189	94.32	protein RETICULATA-RELATED 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103501...	[more]
A0A5D3C7A3	8.2e-189	94.32	Protein RETICULATA-RELATED 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A0A0L080	5.3e-188	93.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G337260 PE=3 SV=1	[more]
A0A6J1DQ40	8.8e-175	90.06	protein RETICULATA-RELATED 3, chloroplastic OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1HTL4	1.6e-168	86.74	protein RETICULATA-RELATED 3, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of CmUC04G073570 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08640.1	1.0e-103	64.42	Protein of unknown function (DUF3411)	[more]
AT3G08630.1	2.6e-102	60.34	Protein of unknown function (DUF3411)	[more]
AT2G37860.3	6.3e-24	30.94	Protein of unknown function (DUF3411)	[more]
AT5G22790.1	1.6e-22	31.48	reticulata-related 1	[more]
AT5G12470.1	1.6e-22	30.37	Protein of unknown function (DUF3411)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021825	Protein RETICULATA-related	PFAM	PF11891	RETICULATA-like	coord: 119..288 e-value: 1.1E-65 score: 220.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 340..368
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 332..368
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 71..99
None	No IPR available	PANTHER	PTHR31620:SF17	PROTEIN RETICULATA-RELATED 3, CHLOROPLASTIC-LIKE	coord: 1..346
None	No IPR available	PANTHER	PTHR31620	PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED	coord: 1..346

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC04G073570.1	CmUC04G073570.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0031969	chloroplast membrane
cellular_component	GO:0016021	integral component of membrane