CmUC04G068150 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC04G068150
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	60S ribosomal protein L6
Location	CmU531Chr04: 1002927 .. 1008574 (-)
RNA-Seq Expression	CmUC04G068150
Synteny	CmUC04G068150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCCGAAGACAGCAAGAGTTAGCCGAAACCCCGATCTCATTCGAGGGGTTGGCAAATACTCGAGGTCTAAGATGTACCATAAGCGAGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTGTTTTCCCTCGCCACGATGCCAAGCCTAAGGCCGATGCTCCAGCAGAGAAGCCGCCCAAATTTTACCCTGCCGACGATGTCAAGAAACCACTTGTTAACAAGCGCAAAGCCAAGCCCACCAAACTTAGGTTCACTCTCTCTCAATCTTCTTTCTTTCGATGTTATTTTACTGTAGTGTCTTTGAACCCATTTTGCTTGCTCTATTGTTGACTTTGGTATGGTTGGAAAGCTGAGGAATTGGAGTAAATAGAGTTCACACTGTAGCTATGGAAAAGGGGGAATTCTTACAACTAAGTGAGAGTCATAAAAGAGTGATTTATTTAACACTTGATTTGAGTTTTGGGTTTTGAATTGGGTGAAATGAAGTAATGTTGCCCATTTTCCAAATAATGAACATTGGATCCAGGGGATGTATTCATCTAACTTAGTTTTATCAATTTTATACTATTTGCAGGTCTAGTATTACTCCTGGAACCGTTCTTATCATTCTTACTGGAAGGTTTAAGGGAAAGAGGGTCGTGTTCTTGAAGCAACTTCCATCTGGGTTGCTTTTGGTGACTGGTGTGTCTTGACTATTTTCTCCAATTGCCTTTCTTTTATGATTTTTTTTTTCTACTATCACACCATGTTGGGGAATCTGTTCGTGGGGATTGGCTTTTCTTTTTCTACATTCTTTGTGAAGTTGTGTTAGATTTGCATTGGAAGTCTCATTCATGGTATCTTAGCATCATAACAATTGTTTACCTTAGGTTTGCATGTCATCTTAAATGTGTTTCCTGGAAGTAGGATACTTTGGGTTTACATTTTGGCAGTATTTATAGTTGAACCCTGAAATCAATTAATATTGAAATGTCTCATGCCTTGCATTTTGCCCATATGCCCTGCCAATGGTCTTTACACCTCCTATTCTGATTATATGCTCTGCTAATGATCTCTACATGCCATAAGTTTCTAAGCTTTATGTGCAATCTTACTGTTCTCTTCTGATGGTTGTGGGTAGGGGGAGGGTTTTGGCTTGGCGATGTGGATTTTATTCGTACATGTTTAGAACGGATGTATATAAAGTAGTGATTAGCCAAGGTTTTTGATTTTAAATCTGCGATTCATGAACCTGCTATCGATTATCTGAATTTAAAGTTTGTCATTTTAGGACCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTCGACATTGCAGGAGTCAATGTGGAGAAGTTTGATGACAAATATTTCTCCAAGGAAGTTCAGAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTCGAGGCAGAGAAGGAGGTTCGTAGTTGTTTTCCACCCTATTTTTTTTTTTGTTCAAATACTTGAAAGATTCATTCCTTTGTCCTAATTTCTGGTTGCCCTTGTTACATGTAGGAAAAAACTGCACTCCCACAAGACAAAAAGGATGATCAGAAGGCCGTGGACTCAGCCCTCCTAAAGTCCATCGAGGCAGTTGCAGACTTAAAGACCTACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAACCGCATGAGCTTGTTTTCTAGATATTTTCTCTTTGGTGCTGATACTTGTGGAATTATTTGATCCCTTCAATCTTCTTGTTCATGTTTTGTTATGAGGATTCTAGATTTGAAATTATGTCTCACAATGAATTTTGTAGTGAAGTTTATTCATCAAATCCTGCGTTACGTTAGCTTCCTTTGACTAATAGTGATACGATGTGTAGTTTTTGTTCAATTGCTGTCTGGTGAAACTCGAGAGAAACATTTGAAAAGATAGATGGCTTGACTTGCATGGTGCATGGCCATGTTTGATTAGTTTGCAACGACATACTATATGGGTAATGTATGTTTGGGGTTTCTTTTTCAATTTGGTTAAAATGATCTTTTCAAAGTCTTTCACTTTTTTTTTTTTCCTCCAGCAAATGATAATGTGATATCAATAATTCTCTTGTTGCCATGTTTAAGAGTGATACTGAAAGGATTAAAATCACTTTTACATGCTTTTAATCATTGGAAAACAATTGTAATGGTATGCAAATTGGATTTGAAAGTGTAAAATTAAACATTTAGAGGTGTTTTAAATTGATTTTAAACATGACATGCAATTTTATTGATGGAAAATGCTTGATATAATCTGGTGAAGCTACACATTAGAATGACTAATTTGTATTATAATTCTGGATATAAAGTTGACCTTTTAAGAAATTGATGATACAGTAGCAATTGATAAGTTGATGCAAAATTTCTTTTATGAACTATATAGTAATATCATAAAAACGTTAATGACTTAAATATTGATGCAATTGACTTTATAAGCCAAAGCAAACTGTGAATCTCTTGAAAAAATAGCTAAAAAAACTCCAAACAAACTGTGAATCACTTCCATATATTGCTATGAAAAGGCTAGTAGTGGCTAGAAACTCTGATGGTACAGAATTTCTAGTTCTACATGCCAATGGGGAACATGTCCAGAAACATAGTGGGAAGTATCAGTTCATATGTTACCAAATCAAAATGTGCCCATGCATGGATGTCATGGGGCTTCTTCTTCGTCTAGGTTTACTTGGTCTTCCACGAACCAATTGAAACATGCTATTCATATATGACTTTTTTTTTTTTTTTTTTTTGTTATATATCAAAGTTCTTATTTATGTTTGTACATATGAAAATGAAGAAACATAAGTGTAATGGTAGTTATGAAACTAATAACTTTCCTTAAGTATAAGCATTTTTTTTAACATTTAACATATTTGTGACGAAATATATTTTATTTGACACTGGAATATTATCATCAGTCAAGCTTTAGTGACGATAAACAAGTGTCATTTTATGTAATTATGTGGTGTTTTGAAAGTGTTACGTATTAAGGTTTTCTTGATACTATAAATATGATATTATTATTGTTTTTATGACAGATTCTCAATGTTAATATACAAGTCTAGATGACAAGAAAAGTATAGAATAAATGTACATAACTTTAGAAATTAAAAAATTAGTATTATATAATTCAACCTTTTAATATATATTTTGTTGCACAATTTGGGGACAAAACACACTTGACATTCACATGCATCGATAGTGAACCTCTTGATTTGGGAGAAAAATATGACCGATAAAAAAAAAAAATTGCTATGACGTTTGCCAACACATCTTTGATGCTTAAATCAAATATGAAAAAAATAGTGTGTAGATAATGTGACAAGGAAGAAGTTTTATCTTTTGAGGTAAAAATAATACATTTATATGATGATTGACATAGCAATTTCAATTTTTCTTTAGGATAACGTCAAAAGACTTTGAACAAGATTGTTCACTATGTCGAGACTTGCCAAACTAAGATGGATCTCACTCCTCTAGCTTGTAGAACAAGTGGATGAATCCCAAGGCAAGCAATATAATCAATTTTTCAATATTGAACTTCAAAAGCAGAAAAGTTTTGGTTGACTAAATAAGGAAAGTAAATGAAATATATAGAAATCAAATCTTACCAAGGTTTCCAATTCACTACCATTATGAATCTTGAAATCATGCATTCGTACATATAAGAAATCAATACGATGCGTCAATTCAATAACAAAAGCTCATAAAGAATAGGAACAAGAACAAAAGAATACTTAGATAAATACATAACATTATAGTGAAATTTAAAGTCTCATGATTTTACAATTGGATTCGAATCGCCTTAATATTAGAAGTTCAAACTCTAGCCAAAAATCGTGATATAGCTAAAGTTCTACTTAAAACCCATAAAAGCTAAAAGTGTAGATTGAAATTAAATAGAGCAAAAAAAGACTATAGGTAATTCACCCAAGTTAGATACTATTCAGAAATTGACAAATAAATATGAACAGAAAACATAAATCAATAGAGAATTGATACACAAATTTACATGGTTCACTAACACTATGTTAGCTACATCCACAGGTAGAAGGAGAGTAGTTTATTACTACATAGAATAATTCAGATTGCAGAGTCAGAGGCGCCTCTAGGGTTAGCGAATTTATATATTTCACTTCTCTAGACCCTAGAGTAAAAAACATAGATAATGTAAATATGACAAATACGAATACAAGACTCCAGTAGTTGGTTGTTCGAAGCGCCAAATATCGAATTTAAGGCATTCCAATAAATCCACCTTTGACTTGAATTTTCTCACATTTAACAAATTGGTATCAGAGTAGGTCTTGACATAGCCATGTCAGAAAAATTCTCAAGTGGCAAACAAAGAAGTGAGAGCCTTTGAAGATGTAGTCATGGTAGTATCTGTCCATGGTTGAGGCTTTAGATGGGCAGTGTGCTCAAATGTAATTTGGAGAGATGACTATTTGAGGGGAAGCTTGATGGTTCTTTATGTAGGAATTGAATTCCTTTTGCGAAAGTGTGTGATCGCTTTTGCCCAATTTTGTTACAAGAATTTTACACAGAACAAAAAACAACATAAGTTAAAGCAAGTTGAACATGAAAGATAAGAGTGCAAATTGAAATACCTTTTGGAGAACACTTCTACAAAATTTCACCTAACCTGGAAAACACAGCTACACGAACCAATTTGATTCAGACACCACCAATATGGTCTTCTCCACGATTCTCTTGGAACAAGGGGGATTGTGGAATCCGTTGTGAGAGGGTTGGGAGAAAACACAGAGAACTTTTCTCTGTTTTGCTTTTTGCAGAGAAATTTTGAGAGAGGTGAGTCAGAATTCTTATGAGAGAGATCTCAAAATAAAATGTAATTCCCCTCTTAAAACCAGAGAGATTTCTCCATTTAGGAAAAATAATACAAGGGGAGTTACCACTCTCCCCACTCACCATTCCCTTACTTTGTAGTAGGGTCGGCAAAAATCCGGTCAGGTCCTTGTGGGTACCCGCCCCAATCGGAGCGAGGAATCCCTCGTTTGATAGGGGATGAGGGTCAAACTGGGGACACAAAATGGGTTCCCAGTCGGGGACGGGAAGGGTATTCCTGCCCTGAATAACTTTTTAATTATTTTGTAATATATATATATATATATATATATATATATATATATATATATATAGCAGTAGCTTATTTTTATTATAAGCTATTGTTTGTGTTTTTTTTTAATATTTTTTTAAAATTTCATTTCTTAGTATATGTATAATTAAATTTTAACTTTATATTAGATTTACTATAAAAAAATCTAAAATGTTTCGTAAATAAATAAAATAATAACAATACCTTGGAATGTTACGGTGTGTTAGATACCAATGAACTTTTTGAGCATAAAAATAATTTATGGCTATATGAATGAACTTTGTATAATTTCTAAGATGGGATAATTACGATATGAAGTTTATTAGTTGTTGGATGCAAGATCGAAGGTGTCTATTATTTTCCTTATTGAGCAGTGTACACCTTATGACTGTGAACCTTCAGGTTCAATACTTATGACTATGACTCGATTCCCCTTGGGATTGCCACCTATGCTTATGATGGTGACCTTCGGGTTTCCTACCTATGA

mRNA sequence

ATGGCTCCGAAGACAGCAAGAGTTAGCCGAAACCCCGATCTCATTCGAGGGGTTGGCAAATACTCGAGGTCTAAGATGTACCATAAGCGAGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTGTTTTCCCTCGCCACGATGCCAAGCCTAAGGCCGATGCTCCAGCAGAGAAGCCGCCCAAATTTTACCCTGCCGACGATGTCAAGAAACCACTTGTTAACAAGCGCAAAGCCAAGCCCACCAAACTTAGGTCTAGTATTACTCCTGGAACCGTTCTTATCATTCTTACTGGAAGGTTTAAGGGAAAGAGGGTCGTGTTCTTGAAGCAACTTCCATCTGGGTTGCTTTTGGTGACTGGACCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTCGACATTGCAGGAGTCAATGTGGAGAAGTTTGATGACAAATATTTCTCCAAGGAAGTTCAGAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTCGAGGCAGAGAAGGAGGAAAAAACTGCACTCCCACAAGACAAAAAGGATGATCAGAAGGCCGTGGACTCAGCCCTCCTAAAGTCCATCGAGGCAGTTGCAGACTTAAAGACCTACTTAGCTGCAAGACACCACCAATATGGTCTTCTCCACGATTCTCTTGGAACAAGGGGGATTGTGGAATCCGTTGTGAGAGGGTTGGGAGAAAACACAGAGAACTTTTCTCTGTTTTGCTTTTTGCAGAGAAATTTTGAGAGAGTAGGGTCGGCAAAAATCCGGTCAGGTCCTTGTGGGTACCCGCCCCAATCGGAGCGAGGAATCCCTCGTTTGATAGGGGATGAGGGTCAAACTGGGGACACAAAATGGGTTCCCAGTCGGGGACGGGAAGGGTTCAATACTTATGACTATGACTCGATTCCCCTTGGGATTGCCACCTATGCTTATGATGGTGACCTTCGGGTTTCCTACCTATGA

Coding sequence (CDS)

ATGGCTCCGAAGACAGCAAGAGTTAGCCGAAACCCCGATCTCATTCGAGGGGTTGGCAAATACTCGAGGTCTAAGATGTACCATAAGCGAGGTCTTTGGGCAATCAAGGCCAAAAATGGAGGTGTTTTCCCTCGCCACGATGCCAAGCCTAAGGCCGATGCTCCAGCAGAGAAGCCGCCCAAATTTTACCCTGCCGACGATGTCAAGAAACCACTTGTTAACAAGCGCAAAGCCAAGCCCACCAAACTTAGGTCTAGTATTACTCCTGGAACCGTTCTTATCATTCTTACTGGAAGGTTTAAGGGAAAGAGGGTCGTGTTCTTGAAGCAACTTCCATCTGGGTTGCTTTTGGTGACTGGACCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTCGACATTGCAGGAGTCAATGTGGAGAAGTTTGATGACAAATATTTCTCCAAGGAAGTTCAGAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTCGAGGCAGAGAAGGAGGAAAAAACTGCACTCCCACAAGACAAAAAGGATGATCAGAAGGCCGTGGACTCAGCCCTCCTAAAGTCCATCGAGGCAGTTGCAGACTTAAAGACCTACTTAGCTGCAAGACACCACCAATATGGTCTTCTCCACGATTCTCTTGGAACAAGGGGGATTGTGGAATCCGTTGTGAGAGGGTTGGGAGAAAACACAGAGAACTTTTCTCTGTTTTGCTTTTTGCAGAGAAATTTTGAGAGAGTAGGGTCGGCAAAAATCCGGTCAGGTCCTTGTGGGTACCCGCCCCAATCGGAGCGAGGAATCCCTCGTTTGATAGGGGATGAGGGTCAAACTGGGGACACAAAATGGGTTCCCAGTCGGGGACGGGAAGGGTTCAATACTTATGACTATGACTCGATTCCCCTTGGGATTGCCACCTATGCTTATGATGGTGACCTTCGGGTTTCCTACCTATGA

Protein sequence

MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKTALPQDKKDDQKAVDSALLKSIEAVADLKTYLAARHHQYGLLHDSLGTRGIVESVVRGLGENTENFSLFCFLQRNFERVGSAKIRSGPCGYPPQSERGIPRLIGDEGQTGDTKWVPSRGREGFNTYDYDSIPLGIATYAYDGDLRVSYL

Homology

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BLAST of CmUC04G068150 vs. NCBI nr
Match: XP_022935449.1 (60S ribosomal protein L6-1-like [Cucurbita moschata] >KAG6581596.1 60S ribosomal protein L6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 411.0 bits (1055), Expect = 9.8e-111
Identity = 212/217 (97.70%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKTALPQDKKDDQKAVDSALLKSIEAVADLKTYLAAR 218
           EK+ALPQDKKDDQKAVDSALLKSIEAV+DLKTYLAAR
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAAR 217

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BLAST of CmUC04G068150 vs. NCBI nr
Match: XP_038880885.1 (60S ribosomal protein L6-1-like [Benincasa hispida])

HSP 1 Score: 411.0 bits (1055), Expect = 9.8e-111
Identity = 214/217 (98.62%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRK KPTKLRSSITPGTVLIILTGRFKGKRVVFLKQL SGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLQSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKTALPQDKKDDQKAVDSALLKSIEAVADLKTYLAAR 218
           EK+ALPQDKKDDQKAVDSALLKSIEAVADLKTYLAAR
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVADLKTYLAAR 217

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BLAST of CmUC04G068150 vs. NCBI nr
Match: XP_004149609.1 (60S ribosomal protein L6-2 [Cucumis sativus] >KGN58615.1 hypothetical protein Csa_001784 [Cucumis sativus])

HSP 1 Score: 409.1 bits (1050), Expect = 3.7e-110
Identity = 211/217 (97.24%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA+APAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKP+VNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKTALPQDKKDDQKAVDSALLKSIEAVADLKTYLAAR 218
           EK+ALPQDKKDDQKAVDSALLKSIEAV+DLKTYLAAR
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAAR 217

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BLAST of CmUC04G068150 vs. NCBI nr
Match: XP_023528566.1 (60S ribosomal protein L6-1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 407.5 bits (1046), Expect = 1.1e-109
Identity = 210/217 (96.77%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPK AR SRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEKPP
Sbjct: 1   MAPKAARASRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKTALPQDKKDDQKAVDSALLKSIEAVADLKTYLAAR 218
           EK+ALPQDKKDDQKAVDSALLKSIEAV+DLKTYLAAR
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAAR 217

[Close]

BLAST of CmUC04G068150 vs. NCBI nr
Match: XP_022983464.1 (60S ribosomal protein L6-1-like [Cucurbita maxima])

HSP 1 Score: 407.5 bits (1046), Expect = 1.1e-109
Identity = 211/217 (97.24%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKTALPQDKKDDQKAVDSALLKSIEAVADLKTYLAAR 218
           EK+ALPQDKKDDQKAVDSALLKSIEAV+ LKTYLAAR
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSYLKTYLAAR 217

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BLAST of CmUC04G068150 vs. ExPASy Swiss-Prot
Match: Q9FZ76 (60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1)

HSP 1 Score: 351.3 bits (900), Expect = 1.2e-95
Identity = 176/216 (81.48%), Postives = 196/216 (90.74%), Query Frame = 0


Query: 2   APKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPK 61
           A +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK DAP EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKPLVN+RK KPTKL++SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEE 181
           FK+NGVPLRRVNQ+YVI TSTK+DI+GVN EKFDDKYF K  +KKKKK EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 182 KTALPQDKKDDQKAVDSALLKSIEAVADLKTYLAAR 218
           K  +PQ+KK+DQK VD+AL+KSIEAV +LK YL AR
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGAR 219

[Close]

BLAST of CmUC04G068150 vs. ExPASy Swiss-Prot
Match: Q9C9C6 (60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 2.7e-95
Identity = 177/214 (82.71%), Postives = 195/214 (91.12%), Query Frame = 0


Query: 4   KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFY 63
           +TA+V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AKP KLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKT 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQDKKDDQKAVDSALLKSIEAVADLKTYLAAR 218
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL AR
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGAR 219

[Close]

BLAST of CmUC04G068150 vs. ExPASy Swiss-Prot
Match: Q9C9C5 (60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 4.6e-95
Identity = 177/214 (82.71%), Postives = 195/214 (91.12%), Query Frame = 0


Query: 4   KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFY 63
           +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AKPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKT 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQDKKDDQKAVDSALLKSIEAVADLKTYLAAR 218
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL AR
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGAR 219

[Close]

BLAST of CmUC04G068150 vs. ExPASy Swiss-Prot
Match: P34091 (60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 4.7e-92
Identity = 173/210 (82.38%), Postives = 187/210 (89.05%), Query Frame = 0


Query: 8   VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFYPADD 67
           VSRNP+L+RG+GKYSRSKMYHKRGLWAIKAKNGGVFP+H  K       EKPPKFYPADD
Sbjct: 11  VSRNPELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPKHAPKSADSKAVEKPPKFYPADD 70

Query: 68  VKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGV 127
           VKKPL+NKRK KPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFKVNGV
Sbjct: 71  VKKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKVNGV 130

Query: 128 PLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKTALPQ 187
           PLRRVNQ+YVIATSTKVDI+GVNVEKFDDKYF K+ +KK KKGEGEFFEAEK+E   LPQ
Sbjct: 131 PLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEKKEVNVLPQ 190

Query: 188 DKKDDQKAVDSALLKSIEAVADLKTYLAAR 218
           +KKDDQKAVD ALLK+IE V +LK YL AR
Sbjct: 191 EKKDDQKAVDVALLKAIEGVPELKAYLGAR 220

[Close]

BLAST of CmUC04G068150 vs. ExPASy Swiss-Prot
Match: Q2YGT9 (60S ribosomal protein L6 OS=Sus scrofa OX=9823 GN=RPL6 PE=1 SV=3)

HSP 1 Score: 175.3 bits (443), Expect = 1.2e-42
Identity = 110/229 (48.03%), Postives = 144/229 (62.88%), Query Frame = 0


Query: 9   SRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKP--------- 68
           SRNP L+RG+G+YSRS MY ++ L+  K            K +  A   KP         
Sbjct: 41  SRNPVLVRGIGRYSRSAMYSRKALYKRKYSAAKSKVEKKKKVRVLATVTKPVGGDKNGGT 100

Query: 69  --------PKFYPADDVKKPLVNKRKAKP-----TKLRSSITPGTVLIILTGRFKGKRVV 128
                   P++YP +DV + L++  K KP      KLR+SITPGT+LIILTGR +GKRV+
Sbjct: 101 RVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSKHVRKLRASITPGTILIILTGRHRGKRVI 160

Query: 129 FLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNV-EKFDDKYFSKEVQK 188
           FLKQL SGLLLVTGP  +N VPLRR +Q +VIATSTK+DI+GV + E   D YF K+  +
Sbjct: 161 FLKQLSSGLLLVTGPLSLNRVPLRRTHQKFVIATSTKIDISGVKIPEHLTDAYFKKKKLR 220

Query: 189 KKKKGEGEFFEAEKEEKTALPQDKKDDQKAVDSALLKSIEAVADLKTYL 215
           K +  EGE F+ EK EK  + + +K DQKAVDS +L+ I+AV  L+ YL
Sbjct: 221 KPRHQEGEIFDTEK-EKYEISEQRKVDQKAVDSQILRRIKAVPQLQGYL 267

[Close]

BLAST of CmUC04G068150 vs. ExPASy TrEMBL
Match: A0A6J1F5G0 (60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111442321 PE=3 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 4.7e-111
Identity = 212/217 (97.70%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKTALPQDKKDDQKAVDSALLKSIEAVADLKTYLAAR 218
           EK+ALPQDKKDDQKAVDSALLKSIEAV+DLKTYLAAR
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAAR 217

[Close]

BLAST of CmUC04G068150 vs. ExPASy TrEMBL
Match: A0A0A0L9J7 (60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_3G698560 PE=3 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.8e-110
Identity = 211/217 (97.24%), Postives = 216/217 (99.54%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKA+APAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKP+VNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GV+VEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKTALPQDKKDDQKAVDSALLKSIEAVADLKTYLAAR 218
           EK+ALPQDKKDDQKAVDSALLKSIEAV+DLKTYLAAR
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAAR 217

[Close]

BLAST of CmUC04G068150 vs. ExPASy TrEMBL
Match: A0A6J1J7G9 (60S ribosomal protein L6 OS=Cucurbita maxima OX=3661 GN=LOC111482059 PE=3 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 5.2e-110
Identity = 211/217 (97.24%), Postives = 215/217 (99.08%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDA+PK DAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVD+AGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKTALPQDKKDDQKAVDSALLKSIEAVADLKTYLAAR 218
           EK+ALPQDKKDDQKAVDSALLKSIEAV+ LKTYLAAR
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSYLKTYLAAR 217

[Close]

BLAST of CmUC04G068150 vs. ExPASy TrEMBL
Match: A0A5D3CKB9 (60S ribosomal protein L6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00210 PE=3 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 6.8e-110
Identity = 210/217 (96.77%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK +APAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKPEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLR+SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKTALPQDKKDDQKAVDSALLKSIEAVADLKTYLAAR 218
           EK+ALPQDKKDDQK VDSALLKSIEAV+DLKTYLAAR
Sbjct: 181 EKSALPQDKKDDQKTVDSALLKSIEAVSDLKTYLAAR 217

[Close]

BLAST of CmUC04G068150 vs. ExPASy TrEMBL
Match: A0A1S3CFY6 (60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103500301 PE=3 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 6.8e-110
Identity = 210/217 (96.77%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60
           MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPK +APAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKPEAPAEKPP 60

Query: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120
           KFYPADDVKKPLVNKRKAKPTKLR+SITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180
           PFKVNGVPLRRVNQSYVIATSTKVDI GVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 181 EKTALPQDKKDDQKAVDSALLKSIEAVADLKTYLAAR 218
           EK+ALPQDKKDDQK VDSALLKSIEAV+DLKTYLAAR
Sbjct: 181 EKSALPQDKKDDQKTVDSALLKSIEAVSDLKTYLAAR 217

[Close]

BLAST of CmUC04G068150 vs. TAIR 10
Match: AT1G18540.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 351.3 bits (900), Expect = 8.6e-97
Identity = 176/216 (81.48%), Postives = 196/216 (90.74%), Query Frame = 0


Query: 2   APKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPK 61
           A +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDA+PK DAP EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 62  FYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGP 121
           FYPA+DVKKPLVN+RK KPTKL++SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 122 FKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEE 181
           FK+NGVPLRRVNQ+YVI TSTK+DI+GVN EKFDDKYF K  +KKKKK EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 182 KTALPQDKKDDQKAVDSALLKSIEAVADLKTYLAAR 218
           K  +PQ+KK+DQK VD+AL+KSIEAV +LK YL AR
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGAR 219

[Close]

BLAST of CmUC04G068150 vs. TAIR 10
Match: AT1G74060.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 350.1 bits (897), Expect = 1.9e-96
Identity = 177/214 (82.71%), Postives = 195/214 (91.12%), Query Frame = 0


Query: 4   KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFY 63
           +TA+V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AKP KLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKT 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQDKKDDQKAVDSALLKSIEAVADLKTYLAAR 218
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL AR
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGAR 219

[Close]

BLAST of CmUC04G068150 vs. TAIR 10
Match: AT1G74050.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 349.4 bits (895), Expect = 3.3e-96
Identity = 177/214 (82.71%), Postives = 195/214 (91.12%), Query Frame = 0


Query: 4   KTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPPKFY 63
           +T +V+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGGVFPRHDAK K DAP EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 64  PADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTGPFK 123
           PA+DVKKPL N+R AKPTKLR+SITPGTVLIIL GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 124 VNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKT 183
           +NGVPLRRVNQ+YVI TSTKVDI+GV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 184 ALPQDKKDDQKAVDSALLKSIEAVADLKTYLAAR 218
            +PQ KKDDQKAVD+AL+K+IEAV +LKTYL AR
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGAR 219

The following BLAST results are available for this feature:

BLAST of CmUC04G068150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935449.1	9.8e-111	97.70	60S ribosomal protein L6-1-like [Cucurbita moschata] >KAG6581596.1 60S ribosomal...	[more]
XP_038880885.1	9.8e-111	98.62	60S ribosomal protein L6-1-like [Benincasa hispida]	[more]
XP_004149609.1	3.7e-110	97.24	60S ribosomal protein L6-2 [Cucumis sativus] >KGN58615.1 hypothetical protein Cs...	[more]
XP_023528566.1	1.1e-109	96.77	60S ribosomal protein L6-1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022983464.1	1.1e-109	97.24	60S ribosomal protein L6-1-like [Cucurbita maxima]	[more]

BLAST of CmUC04G068150 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ76	1.2e-95	81.48	60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1	[more]
Q9C9C6	2.7e-95	82.71	60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1	[more]
Q9C9C5	4.6e-95	82.71	60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1	[more]
P34091	4.7e-92	82.38	60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 S...	[more]
Q2YGT9	1.2e-42	48.03	60S ribosomal protein L6 OS=Sus scrofa OX=9823 GN=RPL6 PE=1 SV=3	[more]

BLAST of CmUC04G068150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1F5G0	4.7e-111	97.70	60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111442321 PE=3 SV=1	[more]
A0A0A0L9J7	1.8e-110	97.24	60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_3G698560 PE=3 SV=1	[more]
A0A6J1J7G9	5.2e-110	97.24	60S ribosomal protein L6 OS=Cucurbita maxima OX=3661 GN=LOC111482059 PE=3 SV=1	[more]
A0A5D3CKB9	6.8e-110	96.77	60S ribosomal protein L6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3CFY6	6.8e-110	96.77	60S ribosomal protein L6 OS=Cucumis melo OX=3656 GN=LOC103500301 PE=3 SV=1	[more]

BLAST of CmUC04G068150 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18540.1	8.6e-97	81.48	Ribosomal protein L6 family protein	[more]
AT1G74060.1	1.9e-96	82.71	Ribosomal protein L6 family protein	[more]
AT1G74050.1	3.3e-96	82.71	Ribosomal protein L6 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000915	60S ribosomal protein L6E	PFAM	PF01159	Ribosomal_L6e	coord: 124..217 e-value: 1.2E-31 score: 109.6
IPR000915	60S ribosomal protein L6E	PANTHER	PTHR10715	60S RIBOSOMAL PROTEIN L6	coord: 1..218
IPR000915	60S ribosomal protein L6E	PROSITE	PS01170	RIBOSOMAL_L6E	coord: 125..143
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 85..169 e-value: 8.6E-17 score: 62.9
IPR005568	Ribosomal protein L6, N-terminal	PFAM	PF03868	Ribosomal_L6e_N	coord: 4..59 e-value: 4.3E-16 score: 58.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 44..68
None	No IPR available	PANTHER	PTHR10715:SF9	60S RIBOSOMAL PROTEIN L6	coord: 1..218
IPR041997	Ribosomal Protein L6, KOW domain	CDD	cd13156	KOW_RPL6	coord: 79..217 e-value: 6.98252E-73 score: 220.497
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 84..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC04G068150.1	CmUC04G068150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0002181	cytoplasmic translation
biological_process	GO:0000027	ribosomal large subunit assembly
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003735	structural constituent of ribosome