CmUC03G055540 (gene) Watermelon (USVL531) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATAAACAGTCATATGGTGTCCACAAGCACAAGTGAGAGAGAGAGAGAGGAGAAGGTAGTGCGAGGGAGAGAAAGAAGCGTGAGCGAGAGGAACAGAGAACGTAGCGAGTACAACCTAATTGGTATGTGACATAGGTAAAATGTTAGTATTCACTATTTTCAAGATTCAAGTCATTTGACATTACCGCAACACAAACTTGGTTATCTGTACAAAAAAAATGCGAAACTAATAGGTGAAAGTAAAGCTTGCAAGCTTAATTTTCGAATGAAGAAAAGCTAAATTGTAGTTTCATACCTATTTGAGTTTTTTTTGAAAAATTAAGCTTCCAAACACATCTCTTTCTAAACTAAGAACAAGAGATAAATTTTTTACTAGAAAATTAAATCTGCCCAAGTACATTCACTTCTCTTCTCTAATACATAATGCTAAAAATAGTGAGTTGAAGTTGAAATGATAATCCAAGTTAATAGCATTTCCATTTGCATTGGCATTGTAATAAAAAAGCAATTTATGATTCTAAGACTTAAGAGATCTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCTCTCCCCCCTTGAACGTGATTCCCAGAATCAGAGCAGAGCGGCACTAAATGCAATTCACTCTCTTCCAACCAATCACTCTCCCTTTTTCTTTTTACTTCTCTTTCTCCTCTCTCCCACTTTCCAAACTCTCTTCTTCCTCTAAACCCTGCAATGATTCTGAGCCTTCTCTGACCCTCAATCTCTCATCCCTGTTACCTCCAAGTCCAAACCCATCTTCTTCCAAATGGGTTGCTGTGTCAGTACTTCTAGGGCTTCTAATTCTTCCTCCCCACCCCACCATTCTGGATCTGCCTATTCCCATCCCAAACTCACTCGCGTTGCAAACAGAGCACCCCCTCCACTGGAAGAAGAGTCTGTTAAAGAGGTTCTCTCTGAAACTCCCAAACCCAAACCGCCGCTGGTTGTGGGGAGGAAGCCCGACGAATCTGCCTCCGGGAAGGTCAATGGGAGAATCCCCATTCATCCCACTGAAGAAATTTCTGAAGTTTCTGACGTTTGTAGTTTTAGCGAAACCCTATCTACTACCACTGTAACAGAGAAGTTGGATGATTTTGAGGAGATACGTCAGAGGATTTGCAGATCTCCGGCCAAATTGCCCAAAAACCGGTCGCTTTCCGATGACTGGGTTCCGAGAAGAGATAGAATGGTGGGTAAATCGCCAACGCGAAAATCCGATCAGTCGCCCGGCCGGATTAACGGCGGCGGCGGAACTGTGAAGTTGGTGCAAAGCAGAGACATGGGGCAGGGACTCACTAGGCGAAGTCCGAGGCCAGAGCCACGCCTGCAGAATAGAACTGACAATGCCTATCGGAGGTCCAGTTCCCCTGCTTACACGCGAACCGCCGCCGGCCGAAGCCCATCTGTCCGGAGGTCCGGAATGTCGCCGGGAAGGGAAACAACTGCCGGAAGAGACTATTACCGGAAAGAAGCAGGGCAGTCTCAGGCTACACAGAACTCGACGATAGAGGGAAAATGGCGGACAACAAATGAATCCCTCGATAACCCACTTGTTTCATTGGAATGCTTCATCTTCCTCTGA ATGATAAACAGTCATATGGTGTCCACAAGCACAAGTGAGAGAGAGAGAGAGGAGAAGGTAGTGCGAGGGAGAGAAAGAAGCGTGAGCGAGAGGAACAGAGAACGTAGCGAGTACAACCTAATTGCCTTCTCTGACCCTCAATCTCTCATCCCTGTTACCTCCAAGTCCAAACCCATCTTCTTCCAAATGGGTTGCTGTGTCAGTACTTCTAGGGCTTCTAATTCTTCCTCCCCACCCCACCATTCTGGATCTGCCTATTCCCATCCCAAACTCACTCGCGTTGCAAACAGAGCACCCCCTCCACTGGAAGAAGAGTCTGTTAAAGAGGTTCTCTCTGAAACTCCCAAACCCAAACCGCCGCTGGTTGTGGGGAGGAAGCCCGACGAATCTGCCTCCGGGAAGGTCAATGGGAGAATCCCCATTCATCCCACTGAAGAAATTTCTGAAGTTTCTGACGTTTGTAGTTTTAGCGAAACCCTATCTACTACCACTGTAACAGAGAAGTTGGATGATTTTGAGGAGATACGTCAGAGGATTTGCAGATCTCCGGCCAAATTGCCCAAAAACCGGTCGCTTTCCGATGACTGGGTTCCGAGAAGAGATAGAATGGTGGGTAAATCGCCAACGCGAAAATCCGATCAGTCGCCCGGCCGGATTAACGGCGGCGGCGGAACTGTGAAGTTGGTGCAAAGCAGAGACATGGGGCAGGGACTCACTAGGCGAAGTCCGAGGCCAGAGCCACGCCTGCAGAATAGAACTGACAATGCCTATCGGAGGTCCAGTTCCCCTGCTTACACGCGAACCGCCGCCGGCCGAAGCCCATCTGTCCGGAGGTCCGGAATGTCGCCGGGAAGGGAAACAACTGCCGGAAGAGACTATTACCGGAAAGAAGCAGGGCAGTCTCAGGCTACACAGAACTCGACGATAGAGGGAAAATGGCGGACAACAAATGAATCCCTCGATAACCCACTTGTTTCATTGGAATGCTTCATCTTCCTCTGA ATGATAAACAGTCATATGGTGTCCACAAGCACAAGTGAGAGAGAGAGAGAGGAGAAGGTAGTGCGAGGGAGAGAAAGAAGCGTGAGCGAGAGGAACAGAGAACGTAGCGAGTACAACCTAATTGCCTTCTCTGACCCTCAATCTCTCATCCCTGTTACCTCCAAGTCCAAACCCATCTTCTTCCAAATGGGTTGCTGTGTCAGTACTTCTAGGGCTTCTAATTCTTCCTCCCCACCCCACCATTCTGGATCTGCCTATTCCCATCCCAAACTCACTCGCGTTGCAAACAGAGCACCCCCTCCACTGGAAGAAGAGTCTGTTAAAGAGGTTCTCTCTGAAACTCCCAAACCCAAACCGCCGCTGGTTGTGGGGAGGAAGCCCGACGAATCTGCCTCCGGGAAGGTCAATGGGAGAATCCCCATTCATCCCACTGAAGAAATTTCTGAAGTTTCTGACGTTTGTAGTTTTAGCGAAACCCTATCTACTACCACTGTAACAGAGAAGTTGGATGATTTTGAGGAGATACGTCAGAGGATTTGCAGATCTCCGGCCAAATTGCCCAAAAACCGGTCGCTTTCCGATGACTGGGTTCCGAGAAGAGATAGAATGGTGGGTAAATCGCCAACGCGAAAATCCGATCAGTCGCCCGGCCGGATTAACGGCGGCGGCGGAACTGTGAAGTTGGTGCAAAGCAGAGACATGGGGCAGGGACTCACTAGGCGAAGTCCGAGGCCAGAGCCACGCCTGCAGAATAGAACTGACAATGCCTATCGGAGGTCCAGTTCCCCTGCTTACACGCGAACCGCCGCCGGCCGAAGCCCATCTGTCCGGAGGTCCGGAATGTCGCCGGGAAGGGAAACAACTGCCGGAAGAGACTATTACCGGAAAGAAGCAGGGCAGTCTCAGGCTACACAGAACTCGACGATAGAGGGAAAATGGCGGACAACAAATGAATCCCTCGATAACCCACTTGTTTCATTGGAATGCTTCATCTTCCTCTGA MINSHMVSTSTSEREREEKVVRGRERSVSERNRERSEYNLIAFSDPQSLIPVTSKSKPIFFQMGCCVSTSRASNSSSPPHHSGSAYSHPKLTRVANRAPPPLEEESVKEVLSETPKPKPPLVVGRKPDESASGKVNGRIPIHPTEEISEVSDVCSFSETLSTTTVTEKLDDFEEIRQRICRSPAKLPKNRSLSDDWVPRRDRMVGKSPTRKSDQSPGRINGGGGTVKLVQSRDMGQGLTRRSPRPEPRLQNRTDNAYRRSSSPAYTRTAAGRSPSVRRSGMSPGRETTAGRDYYRKEAGQSQATQNSTIEGKWRTTNESLDNPLVSLECFIFL Homology
BLAST of CmUC03G055540 vs. NCBI nr
Match: XP_038895057.1 (uncharacterized protein LOC120083387 [Benincasa hispida] >XP_038895058.1 uncharacterized protein LOC120083387 [Benincasa hispida]) HSP 1 Score: 465.7 bits (1197), Expect = 3.4e-127 Identity = 245/278 (88.13%), Postives = 252/278 (90.65%), Query Frame = 0
BLAST of CmUC03G055540 vs. NCBI nr
Match: KAA0056953.1 (pinin-like [Cucumis melo var. makuwa] >TYK26380.1 pinin-like [Cucumis melo var. makuwa]) HSP 1 Score: 446.8 bits (1148), Expect = 1.6e-121 Identity = 241/282 (85.46%), Postives = 251/282 (89.01%), Query Frame = 0
BLAST of CmUC03G055540 vs. NCBI nr
Match: XP_011653054.1 (uncharacterized protein LOC105435171 [Cucumis sativus] >KGN64639.1 hypothetical protein Csa_013293 [Cucumis sativus]) HSP 1 Score: 438.0 bits (1125), Expect = 7.5e-119 Identity = 237/282 (84.04%), Postives = 249/282 (88.30%), Query Frame = 0
BLAST of CmUC03G055540 vs. NCBI nr
Match: XP_023001643.1 (uncharacterized protein LOC111495715 [Cucurbita maxima]) HSP 1 Score: 422.2 bits (1084), Expect = 4.3e-114 Identity = 229/280 (81.79%), Postives = 241/280 (86.07%), Query Frame = 0
BLAST of CmUC03G055540 vs. NCBI nr
Match: XP_022927125.1 (uncharacterized protein LOC111434064 [Cucurbita moschata]) HSP 1 Score: 417.2 bits (1071), Expect = 1.4e-112 Identity = 227/280 (81.07%), Postives = 239/280 (85.36%), Query Frame = 0
BLAST of CmUC03G055540 vs. ExPASy TrEMBL
Match: A0A5D3DT19 (Pinin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00420 PE=4 SV=1) HSP 1 Score: 446.8 bits (1148), Expect = 7.8e-122 Identity = 241/282 (85.46%), Postives = 251/282 (89.01%), Query Frame = 0
BLAST of CmUC03G055540 vs. ExPASy TrEMBL
Match: A0A0A0LUH2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G072990 PE=4 SV=1) HSP 1 Score: 438.0 bits (1125), Expect = 3.6e-119 Identity = 237/282 (84.04%), Postives = 249/282 (88.30%), Query Frame = 0
BLAST of CmUC03G055540 vs. ExPASy TrEMBL
Match: A0A6J1KR40 (uncharacterized protein LOC111495715 OS=Cucurbita maxima OX=3661 GN=LOC111495715 PE=4 SV=1) HSP 1 Score: 422.2 bits (1084), Expect = 2.1e-114 Identity = 229/280 (81.79%), Postives = 241/280 (86.07%), Query Frame = 0
BLAST of CmUC03G055540 vs. ExPASy TrEMBL
Match: A0A6J1EN02 (uncharacterized protein LOC111434064 OS=Cucurbita moschata OX=3662 GN=LOC111434064 PE=4 SV=1) HSP 1 Score: 417.2 bits (1071), Expect = 6.6e-113 Identity = 227/280 (81.07%), Postives = 239/280 (85.36%), Query Frame = 0
BLAST of CmUC03G055540 vs. ExPASy TrEMBL
Match: A0A6J1JZ58 (uncharacterized protein LOC111490165 OS=Cucurbita maxima OX=3661 GN=LOC111490165 PE=4 SV=1) HSP 1 Score: 402.5 bits (1033), Expect = 1.7e-108 Identity = 221/278 (79.50%), Postives = 235/278 (84.53%), Query Frame = 0
BLAST of CmUC03G055540 vs. TAIR 10
Match: AT1G11125.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G61170.1). ) HSP 1 Score: 55.5 bits (132), Expect = 9.8e-08 Identity = 91/312 (29.17%), Postives = 129/312 (41.35%), Query Frame = 0
BLAST of CmUC03G055540 vs. TAIR 10
Match: AT1G61170.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G11125.1); Has 54 Blast hits to 54 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 17; Fungi - 0; Plants - 34; Viruses - 1; Other Eukaryotes - 2 (source: NCBI BLink). ) HSP 1 Score: 52.0 bits (123), Expect = 1.1e-06 Identity = 85/262 (32.44%), Postives = 113/262 (43.13%), Query Frame = 0
BLAST of CmUC03G055540 vs. TAIR 10
Match: AT4G28180.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; Has 1508 Blast hits to 1315 proteins in 223 species: Archae - 4; Bacteria - 127; Metazoa - 687; Fungi - 310; Plants - 142; Viruses - 28; Other Eukaryotes - 210 (source: NCBI BLink). ) HSP 1 Score: 49.7 bits (117), Expect = 5.4e-06 Identity = 93/290 (32.07%), Postives = 124/290 (42.76%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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