CmUC03G055270 (gene) Watermelon (USVL531) v1

Overview


Name	CmUC03G055270
Type	gene
Organism	Citrullus mucosospermus (Watermelon (USVL531) v1)
Description	Receptor-like serine/threonine-protein kinase
Location	CmU531Chr03: 5283240 .. 5283575 (-)
RNA-Seq Expression	CmUC03G055270
Synteny	CmUC03G055270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACCTTGGTGGGCTTCCCCAGTTTGAAACTCGCAAAGGATCCGTCACGTACAAGTTCGGCCCATGGTTCGGAAGTAGATTTAGTGGCAGTCTCTCTTTTAGAAATACGTCAATTAGCTTCTTCATTTTTGTTGCTTGCTTTATCTATTGGCGTAGGAGGGTTGAGGGTAAGTTCTCTTTTATATGATGTACTAATCCTTTTATCGGTCCACGGAAAAACTAAAAAATATTTAAGAGAAAGGTGAAAGAAGTGATATTAACAACGTTATCAAACCGGCTCTAACTACTAGATATTAAGAGAATAACAATTATGTATTCTTCCTTCAGTACATAG

mRNA sequence

ATGGACCTTGGTGGGCTTCCCCAGTTTGAAACTCGCAAAGGATCCGTCACGTACAAGTTCGGCCCATGGTTCGGAAGTAGATTTAGTGGCAGTCTCTCTTTTAGAAATACGTCAATTAGCTTCTTCATTTTTGTTGCTTGCTTTATCTATTGGCGTAGGAGGGTTGAGGATATTAAGAGAATAACAATTATGTATTCTTCCTTCAGTACATAG

Coding sequence (CDS)

ATGGACCTTGGTGGGCTTCCCCAGTTTGAAACTCGCAAAGGATCCGTCACGTACAAGTTCGGCCCATGGTTCGGAAGTAGATTTAGTGGCAGTCTCTCTTTTAGAAATACGTCAATTAGCTTCTTCATTTTTGTTGCTTGCTTTATCTATTGGCGTAGGAGGGTTGAGGATATTAAGAGAATAACAATTATGTATTCTTCCTTCAGTACATAG

Protein sequence

MDLGGLPQFETRKGSVTYKFGPWFGSRFSGSLSFRNTSISFFIFVACFIYWRRRVEDIKRITIMYSSFST

Homology

[Close]

BLAST of CmUC03G055270 vs. NCBI nr
Match: TYK26352.1 (G-type lectin S-receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 2.0e-05
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 1   MDLGGLPQFETRKGSV-TYKFGPWFGSRFSGSLSFRNTSI 40
           MD GGLPQ ETR+G+V TY+ GPWFG RFSG+  FR+T+I
Sbjct: 193 MDPGGLPQLETRRGNVTTYRGGPWFGRRFSGTTLFRDTAI 232

[Close]

BLAST of CmUC03G055270 vs. NCBI nr
Match: KAA0056924.1 (G-type lectin S-receptor-like serine/threonine-protein kinase [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 2.0e-05
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 1   MDLGGLPQFETRKGSV-TYKFGPWFGSRFSGSLSFRNTSI 40
           MD GGLPQ ETR+G+V TY+ GPWFG RFSG+  FR+T+I
Sbjct: 193 MDPGGLPQLETRRGNVTTYRGGPWFGRRFSGTTLFRDTAI 232

[Close]

BLAST of CmUC03G055270 vs. NCBI nr
Match: XP_008441792.1 (PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X3 [Cucumis melo])

HSP 1 Score: 58.9 bits (141), Expect = 2.0e-05
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 1   MDLGGLPQFETRKGSV-TYKFGPWFGSRFSGSLSFRNTSI 40
           MD GGLPQ ETR+G+V TY+ GPWFG RFSG+  FR+T+I
Sbjct: 193 MDPGGLPQLETRRGNVTTYRGGPWFGRRFSGTTLFRDTAI 232

[Close]

BLAST of CmUC03G055270 vs. NCBI nr
Match: XP_008441776.1 (PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X1 [Cucumis melo])

HSP 1 Score: 58.9 bits (141), Expect = 2.0e-05
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 1   MDLGGLPQFETRKGSV-TYKFGPWFGSRFSGSLSFRNTSI 40
           MD GGLPQ ETR+G+V TY+ GPWFG RFSG+  FR+T+I
Sbjct: 193 MDPGGLPQLETRRGNVTTYRGGPWFGRRFSGTTLFRDTAI 232

[Close]

BLAST of CmUC03G055270 vs. NCBI nr
Match: XP_008441782.1 (PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X2 [Cucumis melo])

HSP 1 Score: 58.9 bits (141), Expect = 2.0e-05
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 1   MDLGGLPQFETRKGSV-TYKFGPWFGSRFSGSLSFRNTSI 40
           MD GGLPQ ETR+G+V TY+ GPWFG RFSG+  FR+T+I
Sbjct: 193 MDPGGLPQLETRRGNVTTYRGGPWFGRRFSGTTLFRDTAI 232

[Close]

BLAST of CmUC03G055270 vs. ExPASy TrEMBL
Match: A0A5D3DSB3 (G-type lectin S-receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00110 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.7e-06
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 1   MDLGGLPQFETRKGSV-TYKFGPWFGSRFSGSLSFRNTSI 40
           MD GGLPQ ETR+G+V TY+ GPWFG RFSG+  FR+T+I
Sbjct: 193 MDPGGLPQLETRRGNVTTYRGGPWFGRRFSGTTLFRDTAI 232

[Close]

BLAST of CmUC03G055270 vs. ExPASy TrEMBL
Match: A0A5A7UNX5 (G-type lectin S-receptor-like serine/threonine-protein kinase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G00970 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.7e-06
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 1   MDLGGLPQFETRKGSV-TYKFGPWFGSRFSGSLSFRNTSI 40
           MD GGLPQ ETR+G+V TY+ GPWFG RFSG+  FR+T+I
Sbjct: 193 MDPGGLPQLETRRGNVTTYRGGPWFGRRFSGTTLFRDTAI 232

[Close]

BLAST of CmUC03G055270 vs. ExPASy TrEMBL
Match: A0A1S3B3R8 (Receptor-like serine/threonine-protein kinase OS=Cucumis melo OX=3656 GN=LOC103485832 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.7e-06
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 1   MDLGGLPQFETRKGSV-TYKFGPWFGSRFSGSLSFRNTSI 40
           MD GGLPQ ETR+G+V TY+ GPWFG RFSG+  FR+T+I
Sbjct: 193 MDPGGLPQLETRRGNVTTYRGGPWFGRRFSGTTLFRDTAI 232

[Close]

BLAST of CmUC03G055270 vs. ExPASy TrEMBL
Match: A0A1S3B4W7 (G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103485832 PE=4 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.7e-06
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 1   MDLGGLPQFETRKGSV-TYKFGPWFGSRFSGSLSFRNTSI 40
           MD GGLPQ ETR+G+V TY+ GPWFG RFSG+  FR+T+I
Sbjct: 193 MDPGGLPQLETRRGNVTTYRGGPWFGRRFSGTTLFRDTAI 232

[Close]

BLAST of CmUC03G055270 vs. ExPASy TrEMBL
Match: A0A1S3B3R3 (Receptor-like serine/threonine-protein kinase OS=Cucumis melo OX=3656 GN=LOC103485832 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.7e-06
Identity = 27/40 (67.50%), Postives = 33/40 (82.50%), Query Frame = 0


Query: 1   MDLGGLPQFETRKGSV-TYKFGPWFGSRFSGSLSFRNTSI 40
           MD GGLPQ ETR+G+V TY+ GPWFG RFSG+  FR+T+I
Sbjct: 193 MDPGGLPQLETRRGNVTTYRGGPWFGRRFSGTTLFRDTAI 232

The following BLAST results are available for this feature:

BLAST of CmUC03G055270 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK26352.1	2.0e-05	67.50	G-type lectin S-receptor-like serine/threonine-protein kinase [Cucumis melo var....	[more]
KAA0056924.1	2.0e-05	67.50	G-type lectin S-receptor-like serine/threonine-protein kinase [Cucumis melo var....	[more]
XP_008441792.1	2.0e-05	67.50	PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g272...	[more]
XP_008441776.1	2.0e-05	67.50	PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g272...	[more]
XP_008441782.1	2.0e-05	67.50	PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g272...	[more]

BLAST of CmUC03G055270 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CmUC03G055270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DSB3	9.7e-06	67.50	G-type lectin S-receptor-like serine/threonine-protein kinase OS=Cucumis melo va...	[more]
A0A5A7UNX5	9.7e-06	67.50	G-type lectin S-receptor-like serine/threonine-protein kinase OS=Cucumis melo va...	[more]
A0A1S3B3R8	9.7e-06	67.50	Receptor-like serine/threonine-protein kinase OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A1S3B4W7	9.7e-06	67.50	G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform ...	[more]
A0A1S3B3R3	9.7e-06	67.50	Receptor-like serine/threonine-protein kinase OS=Cucumis melo OX=3656 GN=LOC1034...	[more]

BLAST of CmUC03G055270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CmUC03G055270.1	CmUC03G055270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006468	protein phosphorylation
biological_process	GO:0048544	recognition of pollen
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0030246	carbohydrate binding
molecular_function	GO:0106310	protein serine kinase activity
molecular_function	GO:0004674	protein serine/threonine kinase activity
molecular_function	GO:0004712	protein serine/threonine/tyrosine kinase activity