CmUC03G053180 (gene) Watermelon (USVL531) v1

Overview
NameCmUC03G053180
Typegene
OrganismCitrullus mucosospermus (Watermelon (USVL531) v1)
DescriptionUnknown protein
LocationCmU531Chr03: 3509735 .. 3510352 (+)
RNA-Seq ExpressionCmUC03G053180
SyntenyCmUC03G053180
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAACAAGATGTGTTCTTCCCCTTCATTCCTCGTTGCTTTTACTCTTCATTTTTTGTCAATTTTCAACCCTTTTCTGTTAGCCCATGCAAATCAAAATACAAACGCCACCGTCAATAATTTTGCTCATGGGATTTGCAACAGGCTTATTCAATATAACGATCTATACAAAGTGTGCATTCCCGAGATTGATTCTGACCCTCGTGAAGATTTGAAGTCAGATTTGACAGGTCTTCTAATTATATTCGTGAATCATAGCATCAGCAATTTCAACGACAATATTGTATTTCTTAAGAAGGAGATAAATTCAGGGAAGGTGAATGGTGATACAAAAGACATAATGTCCATGTGTTTGGAAAACTTTGAAACAGGTATCAGTGCTCTGCAAGAGTCTTTGCACATACTACTAACACAAACAGGGATAGATGTGTATCAATTGTCGATGATCAATGTTGAGAATTATGTGAGTGAGTGTGTAGAAGATTTTGAAGGAAATCCTATCCCTAACCCACCTGAGTGGCAATCTCGTTATAATTCTTCATGGAATTTATTGGGTCTCATTTTAGTAATGTCTAATCTCATTAAATGTAATCGTGTAATTTCGTGTATCCCTTGA

mRNA sequence

ATGAAGAACAAGATGTGTTCTTCCCCTTCATTCCTCGTTGCTTTTACTCTTCATTTTTTGTCAATTTTCAACCCTTTTCTGTTAGCCCATGCAAATCAAAATACAAACGCCACCGTCAATAATTTTGCTCATGGGATTTGCAACAGGCTTATTCAATATAACGATCTATACAAAGTGTGCATTCCCGAGATTGATTCTGACCCTCGTGAAGATTTGAAGTCAGATTTGACAGGTCTTCTAATTATATTCGTGAATCATAGCATCAGCAATTTCAACGACAATATTGTATTTCTTAAGAAGGAGATAAATTCAGGGAAGGTGAATGGTGATACAAAAGACATAATGTCCATGTGTTTGGAAAACTTTGAAACAGGTATCAGTGCTCTGCAAGAGTCTTTGCACATACTACTAACACAAACAGGGATAGATGTGTATCAATTGTCGATGATCAATGTTGAGAATTATGTGAGTGAGTGTGTAGAAGATTTTGAAGGAAATCCTATCCCTAACCCACCTGAGTGGCAATCTCGTTATAATTCTTCATGGAATTTATTGGGTCTCATTTTAGTAATGTCTAATCTCATTAAATGTAATCGTGTAATTTCGTGTATCCCTTGA

Coding sequence (CDS)

ATGAAGAACAAGATGTGTTCTTCCCCTTCATTCCTCGTTGCTTTTACTCTTCATTTTTTGTCAATTTTCAACCCTTTTCTGTTAGCCCATGCAAATCAAAATACAAACGCCACCGTCAATAATTTTGCTCATGGGATTTGCAACAGGCTTATTCAATATAACGATCTATACAAAGTGTGCATTCCCGAGATTGATTCTGACCCTCGTGAAGATTTGAAGTCAGATTTGACAGGTCTTCTAATTATATTCGTGAATCATAGCATCAGCAATTTCAACGACAATATTGTATTTCTTAAGAAGGAGATAAATTCAGGGAAGGTGAATGGTGATACAAAAGACATAATGTCCATGTGTTTGGAAAACTTTGAAACAGGTATCAGTGCTCTGCAAGAGTCTTTGCACATACTACTAACACAAACAGGGATAGATGTGTATCAATTGTCGATGATCAATGTTGAGAATTATGTGAGTGAGTGTGTAGAAGATTTTGAAGGAAATCCTATCCCTAACCCACCTGAGTGGCAATCTCGTTATAATTCTTCATGGAATTTATTGGGTCTCATTTTAGTAATGTCTAATCTCATTAAATGTAATCGTGTAATTTCGTGTATCCCTTGA

Protein sequence

MKNKMCSSPSFLVAFTLHFLSIFNPFLLAHANQNTNATVNNFAHGICNRLIQYNDLYKVCIPEIDSDPREDLKSDLTGLLIIFVNHSISNFNDNIVFLKKEINSGKVNGDTKDIMSMCLENFETGISALQESLHILLTQTGIDVYQLSMINVENYVSECVEDFEGNPIPNPPEWQSRYNSSWNLLGLILVMSNLIKCNRVISCIP
Homology
BLAST of CmUC03G053180 vs. NCBI nr
Match: KAG6572151.1 (putative pectinesterase/pectinesterase inhibitor 7, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 249.6 bits (636), Expect = 2.3e-62
Identity = 132/205 (64.39%), Postives = 156/205 (76.10%), Query Frame = 0

Query: 1   MKNKMCSSPSFLVAFTLHFLSIFNPFLLAHANQNTNATVNNFAHGICNRLIQYNDLYKVC 60
           MKN   SS +FL AFTL  LSIFNP + A   +    T + F H  CN+  Q   LYK+C
Sbjct: 303 MKN-TSSSLTFLGAFTLLLLSIFNPSMSAKVEE----TRSTFVHDTCNK-FQIEQLYKLC 362

Query: 61  IPEIDSDPREDLKSDLTGLLIIFVNHSISNFNDNIVFLKKEINSGKVNGDTKDIMSMCLE 120
           IPEIDSDPREDLKS+LTG+LIIFVNHS SNFNDNI FL++EI SGK+NG+TK + + CLE
Sbjct: 363 IPEIDSDPREDLKSNLTGILIIFVNHSFSNFNDNIAFLQREIKSGKLNGETKVMYNGCLE 422

Query: 121 NFETGISALQESLHILLTQTGIDVYQLSMINVENYVSECVEDFEGNPIPNPPEWQSRYNS 180
           +FE G   LQE++HILLTQTGID Y L  IN+ NYVSECV+ +EG+PI  PPEWQSRYN+
Sbjct: 423 DFERGNGDLQETMHILLTQTGIDAYNLPTINIPNYVSECVDFYEGDPI--PPEWQSRYNT 482

Query: 181 SWNLLGLILVMSNLIKCNRVISCIP 206
           SWNLL LI V SNL+KCN  I+CIP
Sbjct: 483 SWNLLTLIGVTSNLMKCNHDIACIP 499

BLAST of CmUC03G053180 vs. NCBI nr
Match: KAG6572152.1 (Expansin-like A2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 231.9 bits (590), Expect = 5.0e-57
Identity = 111/180 (61.67%), Postives = 145/180 (80.56%), Query Frame = 0

Query: 26  FLLAHANQNTNATVNNFAHGICNRLIQYNDLYKVCIPEIDSDPREDLKSDLTGLLIIFVN 85
           F++A  N++TN   NNFAH  CNR  Q+  LYK+CIPE+DS+PREDLKS+LTG+LIIFVN
Sbjct: 142 FVVAEVNRSTN---NNFAHDTCNR-FQFEQLYKLCIPEVDSEPREDLKSNLTGILIIFVN 201

Query: 86  HSISNFNDNIVFLKKEINSGKVNGDTKDIMSMCLENFETGISALQESLHILLTQTGIDVY 145
           H+ISNF DN++FL++EI SGK+NG TK++   CLENFE G + LQ+S+H+LLT+TG D+Y
Sbjct: 202 HTISNFKDNVMFLQREIKSGKLNGKTKEMYDTCLENFERGTTDLQQSMHVLLTETGKDIY 261

Query: 146 QLSMINVENYVSECVEDFEGNPIPNPPEWQSRYNSSWNLLGLILVMSNLIKCNRVISCIP 205
            L  ++V +YV+ECV+DFEG  +P PPEWQSRYN+S  LL LIL   NL+KCNR ++CIP
Sbjct: 262 GLPALSVASYVTECVDDFEG--VPKPPEWQSRYNTSNKLLELILGTCNLMKCNRELACIP 315

BLAST of CmUC03G053180 vs. NCBI nr
Match: KAG6572377.1 (hypothetical protein SDJN03_29105, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 216.9 bits (551), Expect = 1.7e-52
Identity = 114/201 (56.72%), Postives = 143/201 (71.14%), Query Frame = 0

Query: 5   MCSSPSFLVAFTLHFLSIFNPFLLAHANQNTNATVNNFAHGICNRLIQYNDLYKVCIPEI 64
           M SS S L  FTL  LSIFNP +   A +N  + ++ F H  CNR    N+LY +CI EI
Sbjct: 1   MSSSLSLLGVFTLLLLSIFNPSMFVLAKEN-GSNIDKFVHDTCNRFPD-NELYNLCISEI 60

Query: 65  DSDPREDLKSDLTGLLIIFVNHSISNFNDNIVFLKKEINSGKVNGDTKDIMSMCLENFET 124
           DSD REDLKS+L G L IFVN +I+NFNDN+VFL+KEI SGK++ +TK + + C E+F  
Sbjct: 61  DSDLREDLKSNLAGFLTIFVNRTINNFNDNLVFLQKEIKSGKLDAETKLMYNKCSESFGM 120

Query: 125 GISALQESLHILLTQTGIDVYQLSMINVENYVSECVEDFEGNPIPNPPEWQSRYNSSWNL 184
           G + LQES+HILLTQ G +VY L +++V+ +V  C +DFE +PI  PPEW SRYN SWNL
Sbjct: 121 GYTDLQESMHILLTQPGTNVYDLPIMSVDKHVGVCFDDFEDDPI--PPEWTSRYNRSWNL 180

Query: 185 LGLILVMSNLIKCNRVISCIP 206
           + LIL  SNLIKCNR  SCIP
Sbjct: 181 VSLILGTSNLIKCNREASCIP 197

BLAST of CmUC03G053180 vs. NCBI nr
Match: XP_023511468.1 (uncharacterized protein LOC111776286 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 213.0 bits (541), Expect = 2.4e-51
Identity = 103/173 (59.54%), Postives = 131/173 (75.72%), Query Frame = 0

Query: 33  QNTNATVNNFAHGICNRLIQYNDLYKVCIPEIDSDPREDLKSDLTGLLIIFVNHSISNFN 92
           +   +T + F H  CNR  QYN+LYK+CIPEID DPREDLKS+LTG L IFVNH+I+NFN
Sbjct: 3   EEDKSTDDTFVHDTCNR-FQYNELYKLCIPEIDLDPREDLKSNLTGFLTIFVNHTINNFN 62

Query: 93  DNIVFLKKEINSGKVNGDTKDIMSMCLENFETGISALQESLHILLTQTGIDVYQLSMINV 152
           DN++FL++EI SGK++ +TK +   C E+F  G + LQES+HILLTQ G +VY L  ++V
Sbjct: 63  DNLIFLQREIKSGKLDAETKLMYDKCSESFGMGYTKLQESMHILLTQPGTNVYDLPTMSV 122

Query: 153 ENYVSECVEDFEGNPIPNPPEWQSRYNSSWNLLGLILVMSNLIKCNRVISCIP 206
           +  +S C +DFE +PI  PPEWQSRY +SWNL+ LIL  SNLIKCNR  SCIP
Sbjct: 123 DKRISVCFDDFEDDPI--PPEWQSRYKTSWNLVSLILGTSNLIKCNREASCIP 172

BLAST of CmUC03G053180 vs. NCBI nr
Match: KAG6572380.1 (ATP-dependent zinc metalloprotease FTSH 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 212.6 bits (540), Expect = 3.2e-51
Identity = 107/174 (61.49%), Postives = 136/174 (78.16%), Query Frame = 0

Query: 26  FLLAHANQNTNATVNNFAHGICNRLIQYNDLYKVCIPEIDSDPREDLKSDLTGLLIIFVN 85
           F +A  N+++N    NF H  CN+  QY++LYKVCIPEIDSDPREDLKS+LTG LIIFVN
Sbjct: 2   FAMAEENRSSNC---NFVHDTCNK-FQYDELYKVCIPEIDSDPREDLKSNLTGFLIIFVN 61

Query: 86  HSISNFNDNIVFLKKEINSGKVNGDTKDIMSMCLENFETGISALQESLHILLTQTGIDVY 145
           H+ISNFNDNIVFL++EI SGK+N +TK + + CL+ F  G S LQES+HILLTQ G +VY
Sbjct: 62  HTISNFNDNIVFLQREIQSGKLNAETKLMYNTCLKAFGMGYSNLQESMHILLTQPGTNVY 121

Query: 146 QLSMINVENYVSECVEDFEGNPIPNPPEWQSRYNSSWNLLGLILVMSNLIK-CN 199
           +L  ++V+  +S CV+DF+G PI  PPEWQSRYN+SWNL+ L++  SNLI  CN
Sbjct: 122 ELPTMDVDKRISTCVDDFDGEPI--PPEWQSRYNTSWNLVALMVETSNLITYCN 169

BLAST of CmUC03G053180 vs. ExPASy TrEMBL
Match: A0A5D3BJB5 (Putative invertase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004170 PE=4 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 9.0e-44
Identity = 103/201 (51.24%), Postives = 136/201 (67.66%), Query Frame = 0

Query: 5   MCSSPSFLVAFTLHFLSIFNPFLLAHANQNTNATVNNFAHGICNRLIQYNDLYKVCIPEI 64
           M S   FLV      L I +  +L  A+QNT  T+N+F    CNR    ++L  +C+ +I
Sbjct: 1   MASDRQFLV-----LLCILSLCMLTKADQNT--TINDFVRHTCNRT---HELKNLCLSQI 60

Query: 65  DSDPREDLKSDLTGLLIIFVNHSISNFNDNIVFLKKEINSGKVNGDTKDIMSMCLENFET 124
            S+PR DLKS+LTGLL+IFVN SISNF ++I FL+KEINS K++ DTKD++  CL+NF+ 
Sbjct: 61  SSEPRNDLKSNLTGLLMIFVNQSISNFKNDISFLEKEINSNKISRDTKDMLEDCLQNFQI 120

Query: 125 GISALQESLHILLTQTGIDVYQLSMINVENYVSECVEDFEGNPIPNPPEWQSRYNSSWNL 184
           G   L+E++ IL T+TG D  QL + NV N   EC +DFEG P+  PPEWQSRYN+S+ L
Sbjct: 121 GSVNLRETMEILQTKTGYDAEQLPVGNVGNLAVECFDDFEGTPV--PPEWQSRYNASFAL 180

Query: 185 LGLILVMSNLIKCNRVISCIP 206
           L L + M NLI CNR  +CIP
Sbjct: 181 LKLSMAMINLITCNRDYACIP 189

BLAST of CmUC03G053180 vs. ExPASy TrEMBL
Match: A0A6J1C7W5 (uncharacterized protein LOC111008804 OS=Momordica charantia OX=3673 GN=LOC111008804 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 8.7e-23
Identity = 62/169 (36.69%), Postives = 98/169 (57.99%), Query Frame = 0

Query: 37  ATVNNFAHGICNRLIQYNDLYKVCIPEIDSDPREDLKSDLTGLLIIFVNHSISNFNDNIV 96
           +  N+F +  CN+  +  +  KVCI  IDSDP +DLK +L+GLL IF+NHSI N  DN +
Sbjct: 8   SVANSFVNNTCNKFEE--EFIKVCIDVIDSDPHQDLKLNLSGLLAIFINHSIDNATDNHL 67

Query: 97  FLKKEINSGKVNGDTKDIMSMCLENFETGISALQESLHILLTQTGIDVYQLSMINVENYV 156
           +L +++    ++ D +   ++C+E +E G+  L+ SL  LL     D+  L + +  + +
Sbjct: 68  YLMEQLKRSDLDKDIRYTFNVCVEQYERGLDILKSSLEALLKNDKDDL-GLILSDAFDKI 127

Query: 157 SECVEDFEGNPIPNPPEWQSRYNSSWNLLGLILVMSNLIKCNRVISCIP 206
             C +DFE    P PP W + Y     LL L +  +NLI+C +V +CIP
Sbjct: 128 VACEDDFEST--PEPPSWLAHYLPLRKLLALSMGTANLIQCKKVAACIP 171

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6572151.12.3e-6264.39putative pectinesterase/pectinesterase inhibitor 7, partial [Cucurbita argyrospe... [more]
KAG6572152.15.0e-5761.67Expansin-like A2, partial [Cucurbita argyrosperma subsp. sororia][more]
KAG6572377.11.7e-5256.72hypothetical protein SDJN03_29105, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_023511468.12.4e-5159.54uncharacterized protein LOC111776286 [Cucurbita pepo subsp. pepo][more]
KAG6572380.13.2e-5161.49ATP-dependent zinc metalloprotease FTSH 2, chloroplastic, partial [Cucurbita arg... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BJB59.0e-4451.24Putative invertase inhibitor OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca... [more]
A0A6J1C7W58.7e-2336.69uncharacterized protein LOC111008804 OS=Momordica charantia OX=3673 GN=LOC111008... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (USVL531) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006501Pectinesterase inhibitor domainSMARTSM00856PMEI_2coord: 38..191
e-value: 0.0036
score: 22.5
IPR006501Pectinesterase inhibitor domainPFAMPF04043PMEIcoord: 42..166
e-value: 5.1E-6
score: 26.9
IPR006501Pectinesterase inhibitor domainTIGRFAMTIGR01614TIGR01614coord: 19..193
e-value: 4.3E-13
score: 47.0
IPR035513Invertase/pectin methylesterase inhibitor domain superfamilyGENE3D1.20.140.40Invertase/pectin methylesterase inhibitor family proteincoord: 38..197
e-value: 1.4E-11
score: 46.5
IPR035513Invertase/pectin methylesterase inhibitor domain superfamilySUPERFAMILY101148Plant invertase/pectin methylesterase inhibitorcoord: 44..195

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CmUC03G053180.1CmUC03G053180.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0004857 enzyme inhibitor activity